>NP_490493.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFKYWPTFVQQWENSLKAAQKGLEIWKSARADAWLAYHNGIFATSHYEGALTSEDISSAAAAALKGHKIRGGNVNTKSIL
DGSNRLAHTLALQG
>NP_490494.1 putative phospholipase D (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFIPAGLPASYCGTVRSGRFFTGGQRKQLVLKTIEAAQHNIRLMEYSFTSPEVAGALISAKRRGVDVRGGGLDWKANTGK
NNNASRVTMNLLTSAGIPVRTVSVYKILHDKVIVSDGRHTEVGSFNYSRAADRSNSENVLSSGMTQS
>NP_490495.1 DNA replication (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MILEEAEMSQIENAVTSSSKRIYRKGNPLSSAEKKRLSISRKKTTHKELNVFIQNIHKESLQQLCEETGTTQAQMIELLI
EREMAKRA
>NP_490496.1 DNA replication (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSTRDQKSKNPDNLLISWRERKINGAYLNCIATNQAMQGV
>NP_490497.1 replication of plasmid (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLRKFQYLFLWHLLLPCIVSAGRSD
>NP_490498.3 DNA replication (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MQAEVTDTRTLFTHYRQVKNPNPEFTPREGKKTLPFCRKLMAKAEGFTSRFDFSVHVAFVRSLGKRHRMPPLLRRRAIDA
LLQGLCFHYDPLANRVQRSITNLAIECGLATESKSGNLSITRATRALKFMAELGLITYQTEYDPQIGCNIPTDITFTPAL
FSALDVSDVAVMAARRSRVEWENQQRKKQNLEPLEMDELIAKAWRFVRERFRSYQSERKLHGLKRARARRDADRSRKDIE
TLVKQQLTREYASGRFTGGLDAMKRELQRRVKERMMMSRGKNYTRLTMATVPI
>NP_490499.1 putative outer membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSLHRGLCGLRSDIPQAEGITSDDRDTLWIVSEPNLFYRFTRTAAS
>NP_490512.1 hypothetical protein PSLT020 (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MEGNIIRQVGHELYEFRDSSGTVYVDIDNKYWMGQTASPADKIHIKGEVDRGWDGIKIDVKNIQVMK
>NP_490514.1 hypothetical protein PSLT024 (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKSLSISRRGPVISTLSNPSALARDRRVSSSDASVRESVFFLRFFSDLSVGTNTPSRIRATGCTVLLALGVRFTISPEDL
STSTNNFFMSRLSLSRAPPIGG
>NP_490517.1 toxin addiction system: antidote (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKQRITVTVDSDSYQLLKAYDVNISGLVSTTMQNEARRLRAERWQEENREGMAEVASFIEANGSFADDNRNW
>NP_490518.1 toxin addiction system: toxin (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MQFKVYTCKRESRYRLFVDVQSDIIDTPGRRMAVPLVSARLLSEKVPRDLYPVMHIGDEPYRLLTTDMTSVPATVIGEEV
ADLSLRENDIKNAINLMFRGI
>NP_490519.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRVSEQVLLSSLRQGGCVRSFWRRSARLAGTPSPIVPDGLVLETPGERGDTPLCHVDFAVVQKWLVCEETWTQTLGGTEF
GGTVWRLRTDRENTTS
>NP_490520.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MTRSRICPDTESTGLSPASDALPVRETTEQFAQVFFGKSVSLLTPEERFTTVYAGSRDIPADLHPASWFPADTWFRNELR
ACAAYVGRRQGWPLYHASEAERLRALYPLRLATPATDPGKQLLTRTALLKAGYSRATIAAMTPVAERQNRHSGDWYPLYR
VQTETRDDSGEKT
>NP_490521.1 resolvase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSQPPLPAVCTQAASALLPVAIDYPAALALRQMAMQHDDYPKYLLAPEVSALLHYVPDLHRRMLLATLWNTGARINEALA
LTRGDFSLAPPYPFVQLATLKQRAEKAARTAGRMPSGSQPHRLVPLSDNQYVSELQMMVATLKIPLERRNRRTGRTEKAR
LWEITDRTVRTWIGEAVEAAAADDVTFSVPVTPHTFRHSYAMHMLYAGIPLKVLQALMGHKSVSSTEVYTKVFALDVAAR
HRVQFQMPGADAVAMLKGGS
>NP_490522.1 putative diguanylate cyclase/phosphodiesterase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MHFSAFRLQQAIRNREFTPFYQPIVCATGGEVVGCEMLARWLHPQKGLLSAGNFIPAIEATGLGGALLRGLADEVCGDGQ
DLARSAGRRLMMTLNLSLSLVMTPLFRPHLLALSIRLEQAGMTPVFEITEREDIRAFPQAAVFRQLAAGGLRFAVDDFGT
GHAGPASTVADRMIARTVSLARC
>NP_490523.1 putative inner membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLIIVSDCQFTRLALTRLLAHLDPVNMSVARWLQTAPPAGSHVLLAASPGMLASLVPACHHARTSLSLKLALLGSGGQAV
FLNTLGLRPDCLLPRTASATQLKAAVSSWLRRARGWRQATTESLSLRERQALCATLAGLSARTAPGSASAPKPFTAIAAA
R
>NP_490524.1 putative adhesin (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLGANIFLDYDLSRDHARAGFGGEYWRDFLKLSANAYVGLTGWKTSPDVEDYEERPASGWDLRAEGYLPSYPQLGAKMVY
EQYYGNEVGLFGKDERQKNPHALTAGVSWTPVPLLKLSAEQRAGKAGEHDTRFGAEASYRIGDSLRSQLDPDAVGALRSL
AGSRYDLTDRNNDIILEYRKQEVTCQ
>NP_490526.1 putative transposase, IS200-like (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MECEIIEMDGEQDHVHLLIAYPLKLGVSVMVNNLKSVSSRLLRQQNTHLRMQSKTGLLWSRSYFACSAGGATIETLKAYV
LRQNTPE
>NP_490532.1 putative integrase protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MPIIAAIPDEERQLMRKEAQQTHDKNHARRLIAMLMLHQGMTVTDVARLLCAARSSVGRWINWFTLHGVEGLKSLRPGRA
PRWPVADILQLLPLLVQRSPKDFGWLRSRWSTELLALVINRLFDVTLHRSTLHRYLRQADMVWRRAAPTLKIKDPHYEEK
RLVIDQALAQEQTAHPVFYQDEVDIDLNPKIGADWMPKGQQKRIATPGQNQKHYLAGALHSGTGRVHYVSGSSKSSDLFI
SLLETLRRTYRRAKTITLVADNYIIHKSRKVERWLEENPKFRLLFLPMYSPWLNPIERLWLSLHETITRNHQCRYMWQLL
KQVAQFMNAASLFPGNQQGLAKVER
>NP_490538.1 alpha-helical coiled coil protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRPATYEPEQIIEAGLALQAEGRNITGFALRNQVGGGNPTRLRQIWDEYQASQSTVVTEPVAELPVEVAEEVKAVSAALS
ERITQLATELNDKAVRAAERRVAEVTRAAGEQTAQAERELADAAQTVDDLEEKLDELQDRYDSLTLALESERSLRQQHDV
EMAQLKERLAAAEENTRQREERYQEQKTVLQDALNAEQAQHKNTREDLQKRLEQISAEANARTEELKSERDKVNTLLTRL
ESQENALASERQQHLATRETLQQRLEQAIADTQARAGEIALERDRVSSLTARLESQEKASSEQLVRMGSEIASLTERCTQ
LENQRDDARLETMGEKETVAALRGEAEALKRQNQSLMAALSGNKQTGGQNA
>NP_490539.1 putative DNA polymerase III epsilon subunit (3'-5' exonuclease) (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKPAPGAEPVRMYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLGLQARMKSERGRFAMLAHTWLALGPVFLDTE
TTGLDAGAQALEIGLVNARGERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
>NP_490542.1 plasmid partition protein A (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MENIEQLRKVATRAGKLLTSLSESIRQQKEELKLTEFYQEYSKAALYKLPKLSKGSVEYAVAEMEASGYIFKKKPSGNTM
KYAMTIQNVIDLYFHRKVPKYRDRFDKAFTIFVCNLKGGGSKTVSTASLSHAFRAHPQLLFEDLRILAIDFDPQASLTMF
LSHENSVGLVENTAAQAMLQNVSREELLSDFIVSSIIPGVDVIPASIDDAFLAEGWKGLCEEHLPGQNIHAVLKENIIDK
LRYDYDFIFLDSGPHLDAFLKNCIGAADLMLTPLPPATVDFHSSLKFVASLPALIDSIEQDGHTCNLIGNVGFMSKILNK
SDHKICHSQAKEVFGADMLDMVLPRLDGFERCGETFDTVISANPATYDGSTEALKSAKSAAEDFAKAVFDRIEFIRTNGG
M
>NP_490543.1 plasmid partition protein B (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMSNERRKTIGRQLNTQASMVEMTDTQRSQVFTLKTGRKITFRFVRVPASDVESKTFVNQETNGRDQLALTRESLKSIIQ
TIKFQQFFPCIGIQQGERIEILDGSRRRASAIYIRTGLDVMVTNELLSADEARHLAKDIQTAKEHNLREIGLRLMALKES
GFNQKEIAELEGLSQAKVTRALQAAAVPQELISLFPVQSELSFSDYKILLEVNEKLSEKGLTSEGLIQSVSDQHDAILSD
YERPDDEQKSSILKLISQASQALIAPPPKEKSVISALWTFEEKDKFARKRVKGRTLTYEFSRMSKVVQDELDKAINEVLE
RNLSQ
>NP_490546.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFRVTCIDLENGEFALYINGHYLSSEDGSGEKLYLGDILERLSRLPGVTTETVERPVPDSDEWSWNDVADSVFPACITLS
RNMTVAAFKQRLSRFPDDALCCGTFWLASDFLALDSSLTEDDIDAAMELAQHCHDANDGFNWSHLQWAIDEVKRGG
>NP_490547.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MDNNSNINDTWLVGLSVDVNGTEMMVHYLVSATDLEHAEAGVLQMGRTWWPSLKREDDRHRWEYETGVVWFNSIILLDDV
ENSILRGLKFLDAWTVTGSTDAPVLRDEWGNDWRDITR
>NP_490548.1 putative adenine-specific DNA methylase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSRLILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDRTDEWLQPACNQMYRVLKKDALLVSFYGWNRVDRF
MAAWKSAGFSVVGHLVFTKNYSSKSAYVGYRHECAYVLAKGRPALPQNPLPDVLGWKYSGNRHHPTEKPVTSLQPLIESF
THTNAIVLDPFAGSASTCVAALQAGRRYIGIELMEQYHKAGIERLTAVQRAMQRPAANDVFYPEAA
>NP_490549.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MNYSGHEKLRAEVAALANSMCDLRATLKVLEERYHWQRHGLTERLAGQSLRRINTLLDEAYNESLMLNECFKD
>NP_490550.1 putative inner membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRNTLSTLIVRHGDNLLRRSGWPETVGVTQVAPGVVPGWLAVCGVLSAAEILALTTHLCQPLNYGRAQLLTASAQRLAGT
PVRLHLYPVQAYPHPATVRECTEIRLPYAQEWLTTDEYADLLAFLKASADRVCEIVRQDTKRIAAALAPSGESRLMEKRI
GNWRLLADEYDHDNWLDEEDEDGLDKVLDAVLVRNARFCPVLLTLVNEPEEEIEAAGVITDCLRFPGEPNRRWLDRRVLR
DVVNEARSFTGNIR
>NP_490551.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MQYSNQQRARVINVEESDRLSFLPYMFGNDFMLAELQLYALAKKWMPEYNGGFWHFIRLPEGGGYMMPDCDRVHMINGEN
WFDRTVSADAAGIILTSLAINRRCWTHHDCGNAALTRLYMLRDTQLWNHITFHPECNAIYAALD
>NP_490552.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MYGTVSTICCDLLKVYENHEKIAVIIWCEGDVREMGAEFNPTADDIQAVLRAIGESDSDALWRDGIGQNFVEGVLRELVA
LRPPRQIAVPEDVLRTLLPLMEAGMNLPRYQTQDRAAEEETALDTLRYLLSTNIPAHNLTEGNY
>NP_490553.1 putative inner membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSGLNLAATTKEEQDKVAIDLVASGVVYKERLAMPVVAELVVREQPEHLREYFRARLEYLRNSRTRMPRNMPEKRMRLKN
SAIPDAFCLSLAGFYACRVMFFSGRGV
>NP_490554.1 single-strand binding protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MAARGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMREHTEWHRVVVFGKLAEIASEYLRKGAQVYI
EGQLRTRKWTDQSGQDKYTTEVIVNVGGTMQMLGRHNSQPQQEPQTPPTAAKGEGKAVKGAGNAAKGKNAAAPQQPPAQP
DPAYDFDDDIPF
>NP_490555.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MTDNIMSPLKSLPDGTFTHEQAEAVAAQYQNVAIEDDQGTHLRLVVRKDGEMVWRGWNFEPGGEYWLNRCIESHGIRKTQ
>NP_490556.1 putative ParB-like nuclease domain (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

AENDVSDTENGSADADSHHTLPDAA
>NP_490557.1 Plasmid SOS inhibition (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMRNIITPAVLSTMIPQEFEDWRDGGEDLRRELTHAAMRDLTCPAGWDMNGEYRSEFGGFFPVQIRFTPSRGNFSLAVCS
PGDISPSWMVVFIPVSGRPFSVIRTLPAWSPEVITHTLSLVAHLDADGYSQASIISVLAMEGAA
>NP_490558.1 Plasmid SOS inhibition (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MIHSSHALVTLKPARQAALQAILTVEESRRRGARLPALPHARTFLRVLSGSSRINTTVAQRIPGLNWEPKNRLTSLKQVE
EALDRLISSHGEYCPLPLSVDVQAELFPEVIHARTDRRMQREKIAFNRKMRREEKALEHAWLLRQNLLGQAMTELNFQSP
ETVNAWYTRWADEFDARELAQGFWQWRTRFTSLTSLDWLRDSDEPLYNVMYEIWFIVRENPVYVREAERWQVPNKLTNRR
PGRLP
>NP_490560.1 conjugative transfer: mating signal (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MAKVNVYISNEVHNKITAIVEKRRQEGARDKDISFSGTSSMLLELGLRVYEAQMERKESPFNQTEFNKVLLENVLKTQSS
VAKILGIGSLSPHVAGNPKFEYANMVEDIKEKVSSEMERFFHENEE
>NP_490561.1 conjugative transfer: regulation (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MCPTDRRERTLASQSVNKYILSIQDIYKNSPVPVCVRNQSRKIIYANGAFIELFSKEDQPLSGDSYNRYGVEVFLSSLEL
ECQSLGHGAAFCRRFNFHGEIYQIRMENISFDNNEIIVLWQINLFPDHPFFSPDTKTKNLSLSGTESFWNELSPGTLLVF
SFYTLGVSHANIAKELGITIRASEDRIKPVKRKIKRNYESFDSFRISCISKGKIISLIDIIREFYCVK
>NP_490562.1 conjugative transfer: oriT nicking (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLIKARHFWRVFFCRFPCNHKFISRVSRGEFVRRRNAREGISRTVSVYLDEDTNNRLIRAKDRSGRSKTIEVQIRLRDHL
KRYPDFYNEEIFREVIEETESTFKEI
>NP_490563.1 conjugative transfer: fimbrial subunit (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSAILSVQGASAPVKKKSFLSTFTRLNLLKLARAVIPAAVLIFFFPQLAMAAGGSQDLMASGNGTVKATFGKDSSAVKWV
ILAEVLVGAVMYMMTKNVKFLAGFAIISVFIAVGMAVVGL
>NP_490564.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSGDENKLRKYRFPETLTNQSRWFGLPVDELIPAAVCIGWGLMTSKQLFGISAAVLVYFGIRKLKKGRGSSWLRDLIYWY
MPTALLRGIFHNVPDSCFRQWIK
>NP_490565.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MEHGARLSTSRVLAISFIFMALLIVLSLAVNVIQGINNYRLQNEQRTAVTPMGFNASFAVSQNSADASYLQQMALSFIAL
RLNVSSETVDASHQALLQYIRSGAQNQMKVILAEEARRIKADNVNSAFFQTSVRVWPQYGRVEIRGVLKTWIGDSKPFTD
IKHYILILKRENGVTWLDNFGETDDEKK
>NP_490566.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRKNKPYKPFLLAAGWLFSGLVMASGSGTLAPVVVSLANGGQANIAVSNTDPNLFTVPGDRITAVSGLDGMLTNSEQTGT
GGVVVATVSKKPFTFILETERGLNFSVRAVPRAGAGRTVQLVSDLRGTGEEAGAWETATPYESLLVAVSQAVRGGTLPAG
WYQIPVTKEALQAPAGLSARADAVWTGNHLKLVRFAVENKMPSALNIRESDFWQPGTRAVMFSQPVSQILAGARMDVYVI
RDGEGN
>NP_490567.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MASINTVVKRKQYIWLGIVAVGAAAAIGGGLYLSDVDMSGNGTAAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQM
QKQYDEIRHELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTTTGEPVPHTPVSPPGPEGEPQPGNTPMTFPPQ
GAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKTFSYDAAAKKGPSLPYIPSGSFAKTMLIEGADANASVTGNESTVP
MQLRITGPVEMPNSKTYDLTGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMSVKGHVSFRGKNGIKGEVVMRNGKI
LGWAWGAGFVDGIGQGMERASQQAVGLGATATYGAGDVFRMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV
FQDGFQLKTVEEMAQEQARHRKEDENAESPVPIPPSVDSHMNGFNTDQMLKQLGDLNPQQFMSGSQGGHVNGK
>NP_490568.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MGNNRLNNLKGRAVLYRIAGLLRWLIWGVKYAVIWPLATTAIVVILLFRTGDTTPGQQMAQEIGRVRAMAPSGMFPVRDC
PDPAFTVSSPVPLNLTENCPLKITGAEEYAADIDQSLSQTGWLLWGMLALLYTAVAVMIGDRPYRHNPLTYAYDTATNNL
KYIDKENEIRTLKVNTNGQVSYSGNKEAKKEGDKNEHT
>NP_490569.1 conjugative transfer protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MIKMNIRNVISVPDESVQDDFVKYVISNCTTKIILSGRREYNFSRQEYNFSVTGMPGAGKTCVLSELIKKLLRENKKGAK
S
>NP_490570.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MNRISCLIPFCGALLLSGCAGTNSDFECTATTSDTCMTMEQANEKAKRQEQPETVKPGAVSLPRLAEGNFRTTPVQVVST
VTLPVAKTVAAPRSGQKPPAPHPLFTAAREVKPVAAVSTVSPVVPPRPLRTREQTAALWIAPYIDSQDIYHQPSGVFFVI
KPSVWGKPRIN
>NP_490571.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSDEADEAYSVTEQLTVTGINRIRQKVNRKGIPVYRCEACGNPIPEARRKIFPGVTLCVECQSFLEKQGRHYA
>NP_490572.1 conjugative transfer protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MHKSDAEKMESIIDKHDRIYRRQVRVFKNLGFLSIITAVLSVITALFSTSLLLKYTLCVVICVCLIYLVFMFFCLDRYIA
LSRQTLLWLLRRVEDTADVRRELLRRLLSGKTLTGRDEDDILRLWWESSNEVEELATRQREQDAIRKFVGGDKSE
>NP_490573.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

TD
>NP_490574.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSTKQKQTDGTGARKRDGLWMIPGCLGMVVLNAAISYGIVRLNTPVTVAFNMKQTVDAFFDSAGQKKLTEAQSKALSGRF
NAALEASLQAWQREHHAVILVSPAVVQGAPDITREIQQDIARRMRAEP
>NP_490575.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKWRGLTALLIWGQSVAAADLGTWGDLWPVQEPDMLAVIMHRLEALQQSGEMGRRMEAFKERVIHNSLRPPAVPGIGRAE
KYRSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPEQVSWMKRQTPPTLESKIILVQGSIPEM
EKALDSRIYFDQNGVLCQRLGIDQVPARVTAAKDGRFLKVEFIPAEDGRK
>NP_490576.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKRYLWLCVLILLAGHVPTVSADAACESRFVNPITDICWSCIFPLSLGSTKVSQGKLPDTANPSMPLQFCPAPPPIFKRP
GLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGTAKKEDKQVNGAFYHVHWYKYPLTYWLNIITSMGCLEGGDLD
IAYLSEIDPTWTDSSLTSILNPEAVIFANPIAQGACAADAIASTFNKPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSL
LVSERMAFKLHRQGQIMETIGQNTAVCFEYPSPILPKERWRYQMVNMYPDSGQCHPFGRSVMRWETGKNPPNTKKNFGYL
MWRKRNCVFL
>NP_490577.1 conjugative transfer protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFMRIIYKRQHYLSVIRWGAVAVVQVLNESVKLFPFALVMFALMAFYFLPERIISDVVNSWMETDTTGKISLIRLYLEVT
FMLSLESSSLLFMYRGKRCTGK
>NP_490578.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MHRKIKYLAGLIMVISGTVSAGGVANTPENRQFLKQQEELSRQLRDRPDAELKAWADRQIQANPLVQSDRHFLDDLARKQ
QTSQADKPEQGAVYFISFSIPEEGLKRMLGETRRYGIPATLRGMRDNDLKATADAVLSLVKDGATDGVQIDPTLFTKYDI
RSVPTLVVYCRQGYDVIRGNLRVKQALEKVVTAGDCRQVAAGLLDGAGDKPQ
>NP_490579.1 conjugative transfer: aggregate stability (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

ELQQIKFDQLDLTNFYEDLMNNQKIPDSGALTEKVKEQIADQLRQAGK
>NP_490580.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKIMSFLVRVVVTLIVISPAVYWSWDAVSTTTADDIMLAVLIIAAYGLMFTLLFCFVNVLTKLLQHDNESS
>NP_490581.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRKIQTVWVAALLCGSLTAYGKDAGWQWYNDPVKLPDPKTTDKSAQVRQEPDIMQKLSALQTATKRALYEAILYPGVDNF
VKYFRLQNYWTQQAGLFSMSAKKAMLAHPELDYNLQYSHYNGTVRNQLAADQAQQRQAISKLAEHYGIMFFYRGQDPIDG
QLAQVINGFRATYGLSVIPVTVDGVINPMLPDTRPDQGQAQRLGVKYFPAMMLVDPKQGSVRPLSYGFITQDDLAKQFLN
VSEDFKPNF
>NP_490582.1 conjugative transfer: fimbrial synthesis (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRKYKLSLPLPDITGVWVFSLGVWFHIVGRLVYRKPWMAFFLAELIAIILVLSGAYRVLDAWIARVSREERALLEARQAA
ILAAEKEEKGDKSHVSQ
>NP_490583.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSLNKALLFLLLLMGTGVNASTREEIERLYNPHGMAAPSGQKQPADTQGVQKVTPAPRWFRLSNGKTVNLADWKVVLFMQ
RSCPWCHQFDPVLKQVAQQYGFSVFPYTLDGQGDAAFPEALPAPPEVMQTFFPNIPVATPTTFLVNVNTLEALPLLQGAT
DAAGFMARMDTVLQMYGEKHAG
>NP_490584.1 conjugative transfer: assembly (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MQGKTRIKPLFILCTALMTVAPAVSADVNSDMNQFFNKLGFASNTTQPSVWQGQAAGYASGGSLYARTQVKNVQLVSMTL
PDINAGCGGIDAYLGSFSFINGEQLQRFVKQIMSNAAGYFFDLALQTTVPEIKTAKDFLQKMASDINSMNLSSCQAAQGI
VGGLFPKTQVSQQKVCQDIAGESNIFADWAASRQGCTVGGQSDSVRDKASDKDKERVTKNINIMWNALSKNRMFDGNKEL
KEFVMTLTGSLVFGPNGEIMPLPARTTDRAIIRALMEGGTAKIYHCNDSDKCLKVVADTPVTISRDNALKSQITKLLTSI
QNKAVSDTPLDNKEKGFISSTTIPVFKYLVDPQMLGVSTSMIYQLTDYIGYDILLQYIQELIQQARAMVATGNYDEAVIE
HITDNMNDATRQIASFQAQVQVQQDALLVVDRQMSYMRQQLSARMLSRYQNNYHFGGGAQ
>NP_490585.1 conjugative transfer: assembly abd aggregate stability (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

>NP_490586.1 conjugative transfer: surface exclusion (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MGMKNLAQIVLVTVVQFIACYLAEWGVAETGIILLFVLLWQGLFIWLFIQIRKKNNISDEFKFSKGIWYVIMPVCSLLSP
LLSLMIFIGGTLYELRRVSGCISIKEWVKCQLDDQYDEDRGLDFESVEYRQTTYYNPSTGYPMHGGVDSAGNTFGSRWQD
NNDR
>NP_490587.1 conjugative transfer: surface exclusion (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKMKKIMMVTLVSSTLALSGCGAMSTAIKKRNLEVKTQMSQTIWLDPSSERTVYLQVKNTSDKDMSDLQSLIAKDIQAKG
YTVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEGALSGAALGAGITAYNSNSAGATLGVGLAAGLVGMAADAMVE
DINYTMITDVQISERTKATVTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEEQLAKSIA
NIL
>NP_490588.1 conjugative transfer: DNA transport (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

QMQRREEVNINVHRGHGKDEPEPGDDF
>NP_490589.1 conjugative transfer (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MAVSAPVLSSQSTHTFKLPGVVRDNNQSPAACVTGNHLIEWPDRASLTGKLCPDLPRMGGGRRVIIQNIKSGNKPLYHSE
ISFGHLAFFGAVNQLHQGDRADTHSPLVQVKTLPDAGRFVFYRENADVSIQHKLQHQNDSRSCTEGCSRLSIKSALTLFP
SNHSSHDSPAGVIIRVRPTAITSTRFTFSGKATAFGSLTAWLRLLRNTLVSIMCLLTGICLTYIHYGFCDGICQRDIHL
>NP_490592.1 conjugative transfer: oriT nicking-unwinding (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

>NP_490593.1 conjugative transfer: fimbrial acetylation (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MTMDNATRNDSRAVRVDTRLQRLLAWSPGQRDLIKTVALLLMVADHINRILHLNQEWLFLAGRGAFPLFALVWGLNLSQH
THIRQSAINRLWGWAVIAQSGYFLAGFPWYEGNILFAFAVTAQALKWCEQRCLFHSAAALLLLTAWIPLSGTSYGVAGVL
VLVICYRLYRTTDTEEHLALAACLVVAVPALNLVTSDAAAVAGLLVTGLTVWLVSLTGKSRPRFWPADFFPVFYTCHLAA
LGVLAM
>NP_490594.1 conjugative transfer: regulation (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MTEQKRPVLTLKRKTDGEAPARSRKTIINVTTPPKWKVKKQQLADRAVREASLAEKKARARKDLSIYLRFQSVEEAVSTL
KPWWPGLFDGDTPRLFACGVREALFEDASRRGIPLSHKKIIRALKAIARSEAYLSAMKAGACRYDTEGYVTEHITVEEEQ
YALARLAKVRAQNARKAELRAVLAQTV
>NP_490500.1 sdiA-regulated gene;putative bacterial regulatory helix-turn-helix proteins, araC family (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MELDKYLLFFLAGGSTFNQGKAFSFRCAQDSIVLTKVHQTEMHFYRWYHHVVITRETLCRFARQLDVDVLKFYIPKDIPR
YLVQPCPEDSVFRPLMVRLCAGTDNSYGETGPENPFLTFALVSAFCEQDIFFPFLKTCLKQSMADQVATVINRNVSENWT
IHRVAGELYVSVSLLKKKLKEENTSYTRILLECRMKKASELIVMQEGAVKKVAYQCGYSSVPYFISQFRKYYGYTPSRCK
PDGNLFYSFIAK
>NP_490501.1 resistance to complement killing (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKKIVLSSLLLSAAGLAAVPVAQADTHSVSVGYAQSRIEHFKDIRGVNLKYRYEAQTPLGLMASFSWQSGKRGESGGIPG
GMSWRDDVKATYWSLMAGPAVRVNELVSLYALAGAGTGRAEVKERISMPGYNGRFTGSERRTGFAWGAGVQFNPVENVVI
DLGYEGSKVGAAKLNGVNVGVGYRF
>NP_490502.1 sdiA-regulated gene; putative outer membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMWSPVSPVTENITFTTTMFRYLCNQKAALLTAILLMAAGVLTLCFPESWYPQETEWHLTAEKEITGIHGGLSGLTWNPD
SRTLFAVTDHPSSVVELDTEGNVLRVIPSDGDHDFEAIEYLGGNRYALSRERERTLTTHCIDSSTTVLPPATYSLTLDVN
RHSDNAGFEGLARGRGEHALMVAQEKKPLRLYVTDRSPDALSVSDSLTHRASLPWFLKDISGLHYDRNNGLLYVLSHESA
VVVVSGLDGGRKVMSLHRGLCGLRSDIPQAEGITSDDRDTLWIVSEPNLFYRFTRTAAS
>NP_490503.1 sdiA-regulated gene; putative thiol-disulfide isomerase or thioredoxin (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MTMNYARDLFSLKGILFSFLLAGCVCPVVAQEWESITPPVVDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRM
VKYHVSLLGPLGHELTRAWALAMVMKETDVIEKAFFTAGMVEKRLHSPDDVRRVFMSATGISRGEYDRSIKSPAVNDMVA
LQERLFKEYGVRGTPSVYVRGRYHINNAAFGAFSVENFRSRYAAVVRKLLAGNPDAD
>NP_490504.1 putative bacterial regulatory proteins, luxR family (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MASALTAFPEDGDFSRIWYDRLCIEFNSDGGLSPAELRVIRLLLRGYNSGQIAALCFRSVKTISAQKGQAFRRLGVRNDA
TLLPTLMLLGMVTLYTDLNRVHSLEEAGLECGPEAG
>NP_490505.1 plasmid-encoded fimbriae; regulatory (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSESIVTKIISIVQERQNMDDGAPVKTRDIADAAGLSIYQVRLYLEQLHDVGVLEKVNAGKGVPGLWRLL
>NP_490506.1 putative outer membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLKLLIASVIIMGGTVITYPAHAKTTTVSTYSQGIYQYQMQASNFMIKSDQAALSMVTMTSFSQCNVQIISRTCNGTAMV
IAPDGTRYPAEVECKVADKGFGVMFRAPGLVQNGIVAGEGYILPAGYTLMFSLSRTGEVRTTRTLYDECEASSLGSWLHQ
YHLPSPSVTLTSSSGARYTLGNGVMSTSFPAGGTTKSITVEHPDSINSKAGVNGAFEQVILKASGTPGASIRVTQSITPS
EVARNAQLLKTTGGQCTTMRAGDECKLVLAPGTIRPGHTSSGTVLISVQLQ
>NP_490507.1 putative outer membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMRRSEIRWMKRHVCAGALVTGLLFPLATEAASKENITIPFTLTNPQQTCKLTFDNGGNTMNYQLGVMNKGVRMQHRPFT
VKVDCGQSTVVKTALTARNTTGTLQGGGDSSVVIMRMNGQPSNNGPLFWLENGSKRVKLTGKDDDAFCISPSPNNCELRP
VTDIPANSPEGNIDVTVVFDVVYPQ
>NP_490508.1 plasmid-encoded fimbriae;chaperone (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MNKMMKWGLVSLLSLAVSGQAMAAFVLNGTRFIYEEGRKNTSFEVTNQADETFGGQVWIDNTTQGSSTVYMVPAPPFFKV
RPKEKQIIRIMKTDSTLPSDRESLFWLNVQEIPPKPKASEGNVLAVAVNTKVKLIYRPKALVEGRRNAEKNLQIAHRGGE
AYLKNPTPYYFAVTGVKLNGQPVRLNDRVMNEIAQLAPKSEVALGKLSLNGTVTVQAVNDWGGTQDYTLK
>NP_490509.1 plasmid-encoded fimbriae; usher protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

CE
>NP_490510.1 plasmid-encoded fimbriae; major fimbrial subunit (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKKSIIASIIALGVLGGTAHAANEVTFLGSVSATTCDLTTSVNGAAQPNQVVQLGTVQANQPGNFVDFAMKPVDPNAQGC
ANLAQKTATVSWASAALDGEGFGATSGTATDAKVLVESVNSKNPGAVNANASTVDFEGAKLTTDGLQFKAKLKGGATEGD
FKSVASFAVAYK
>NP_490511.1 plasmid-encoded fimbriae;regulation (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMLNRKDADYYLGKEIMLARIRRGALIPAKVNEEHFWLLIGISSIHSEKIIQALRDYLVFGVSRKDVCERYEVNNGYFST
SLNRLSRISQAAAQMVVYYS
>NP_490513.1 DNA replication (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFVEVDKSSGEIVNLTPNASNTVQPVALMRLGVFVPTLKSLKNRKKNTLSRTDASEELTRLSLARAEGFDKVEITGPRLD
MDNDFKTWVGVIHSFARHKVIGDKVELSFVEFAKLCGIPSSQSSRKLRERISPSLKRIAGTVISFSRTTEKHTKEYITHL
VQSAYYDTEKDIVQLQADPRLFELYQFDRKVLLQLKAINALKRRESAQALYTFIESLPRDPAPISLARLRARLNLKSPVF
SQNQTVRRAMEQLREIGYLDYTEIQRGRTKLFCIHYRRPKLKPPHDESAENPQLPATPGDVSPEMAEKLALLDKLGITLD
DLEKLFKSR
>NP_490515.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MDAEFQKQGLTDLTETDLQAVVTPGETLRLLPTLARLLHVLREKPEAFSLSAASYEEDTSSALKTLLVRTGFTIHQIREM
RLHLIRWQLISQEEYDRE
>NP_490516.1 putative periplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MAIPPTCKEIFMNTALLAPFISIALSGVGVYTHYYFKKYQASMDQCQKVHKMMVDTLLGTKRLFSRSAPAQALKSELRIM
QQQLSQEAQKLDKMTIRLPLKRLQREQRHILRHADWLLHYLDSHLADNEGKFFLFLHDLAMDSDDKVLDFLTSLHDTKRF
RNRRLQTGSTTCP
>NP_490525.1 putative transposase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLRATKVCIYPTPEQAEHLNAQFGAVRFVYSKSLHIKKHAYQRHGVSLTPRKDIKPLLAVAKKFRKFRKYAWLKEYDSIA
LQQAVINLDVAFSNCFNPKLKARFPMFKRKHGKLLG
>NP_490527.1 Salmonella plasmid virulence: hydrophilic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MRVSGSASSQDIISRINSKNINNNDSNEVKRIKDALCIESKERILYPQNLSRDNLKQMARYVNNTYVHYSGNCVLLSACL
HYNIHHRQDILSSKNTASPTVGLDSAIVDKIIFGHELNQSYCLNSIDEVEKEILNRYDIKRESSFIISAENYIAPIIGEC
RHDFNAVVICEYDKKPYVQFIDSWKTSNILPSLQEIKKHFSSSGEFYVRAYDEKHD
>NP_490528.1 Salmonella plasmid virulence: hydrophilic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MPINRPNLNLNIPPLNIVAAYDGAEIPSTNKHLKNNFNSLHNQMRKMPVSHFKEALDVPDYSGMRQSGFFAMSQGFQLNN
HGYDVFIHARRESPQSQGKFAGDKFHISVLRDMVPQAFQALSGLLFSEDSPVDKWKVTDMEKVVQQARVSLGAQFTLYIK
PDQENSQYSASFLHKTRQFIECLESRLSENGVISGQCPESDVHPENWKYLSYRNELRSGRDGGEMQRQALREEPFYRLMT
E
>NP_490529.1 Salmonella plasmid virulence: hydrophilic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

ASQLSKLRLSDDATADTNRIKRIINMRVLNS
>NP_490530.1 Salmonella plasmid virulence: outer membrane protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MNMNQTTSPALSQVETAIRVPAGNFAKYNYYSVFDIVRQTRKQFINANMSWPGSRGGKTWDLAMGQAQYIRCMFRENQLT
RRVRGTLQQTPDNGTNLSSSAVGGIQGQAERRPDLATLMVVNDAINQQIPTLLPYHFPHDQVELSLLNTDVSLEDIISES
SIDWPWFLSNSLTGDNSNYAMELASRLSPEQQTLPTEPDNSTATDLTSFYQTNLGLKTADYTPFEALNTFARQLAITVPP
GGTVDCGYSACQPAV
>NP_490531.1 Salmonella plasmid virulence: regulation of spv operon, lysR family (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MDFLINKKLKIFITLMETGSFSIATSVLYITRTPLSRVISDLERELKQRLFIRKNGTLIPTEFAQTIYRKVKSHYIFLHA
LEQEIGPTGKTKQLEIIFDEIYPGSLKNLIISALTISGQKTNIMGRAVNSQIIEELCQTNNCIVISARNYFHRESLVCRT
SVEGGVMLFIPKKFFLCGKPDINRLAGTPVLFHEGAKNFNLDTIYHFFEQTLGITNPAFSFDNVDLFSSLYRLQQGLAML
LIPVRVCRALGLSTDHALHIKGVALCTSLYYPTKKRETPDYRKAIKLIQQELKQSTF
>NP_490533.1 putative phosphoribulokinase / uridine kinase family (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKYSPASETIFVADNQERTMRVEVMEHYGLTQSIEQAGYYETAHHKQLMKDIKGAIREGRLIAVCGVVGSGKTVTLRRLQ
QQLLDENKIIVARSLSVDKQSVRLATLINALFYDLAQDKQVQIHKQGERRERELQELVKKGKRPVALFVDEAHDLNGNTL
TGLKRLMEVVEDGGGRLSVVLAGHPKLRNDLRRPTMEEIGYRTDIFTLDGITGSQREYIQWLLKTSTGKGKPEDILTTEA
VDLLAMKLRTPLQVQLHLTLAMEAGYQTGEKPITATLVESVLSRQLDDLEPTLTRHGYRLKDMVEQFDAKPAEIRALFNN
QLDPARTAELRDRMLAVGLPI
>NP_490534.1 putative integrase protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

>NP_490535.1 putative resolvase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLLLEFLRPGDTLMVTRVDRLARSIKDLQDIVY
ALNQQGVTLRATEQPVDTRSAAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAVVYRLYTIEKMG
ATAIARQLGIGRASVYRALENYEQPA
>NP_490536.1 putative carbonic anhydrase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MEQNQPAQPSRRAILKQTLAVSALSVTGLAALSVPTISFAASLSKEERDGMTPDAVIEHFKQGNLRFRENRPAKHDYLAQ
KRNSIAGQYPAAVILSCIDSRAPAEIVLDAGIGETFNSRVAGNISNRDMLGSMEFACAVAGAKVVLVIGHTRCGAVRCAI
DNAELGNLTGLLDEIKPAIAKTEYSGERKGSNYDFVDAVARKNVELTIENIRKNSPVLKQLEDEKKIKIVGSMYHLTGGK
VEFFEV
>NP_490537.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MPQDESVVKRAREYFFRHHRYTEEDLESDYQAELCNYRDDTWEAPQRAARLSAAVKRYKTYEMLYFFFQIADEAGLDYTP
LVVKRLCAHLFDRQGSQNIIVDIFGQKGRMHRSHDSDPDIIAAVAERYRQQAEDHWQTVLKNIGRVKQDYQKNQNRQKGA
GD
>NP_490540.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MSHPDPAQASLTDSTGKRYGSVTICTAAAAGSMPTVGFRRVSNILSPRAFTRPISSACAPASSPVVSVSRKTGPSANQVC
ASMANLPRSLFIRACRPRRVLASRCFSV
>NP_490541.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MKKKNTTPTPHDATFRQFLTQPDIARDFMELHLPAELRAICDLSTLKLESGSFVEDDLRQYFSDVLYSLKTTAGDGYIHV
LVEHQSTPDKHMAFRLIRYAVAAMQRHLEAGHKKLPLVIPVLFYTGKRSPYPYSTRWLDEFDDTALADKLYSSAFPLVDV
TVIPDDEIAGHRSMAALTLLQKHIHQRDLAELVDRLAPILLAGYLSSSQVISLVHYIVQAGETSDAEAFVRELAQRVPQH
GDALMTIAQQLEQKGIEKGIQLGEQRGIEKGRSEGEREATLKIARTMLQNCIDRNTVMKMTGLTEDDLAQIRH
>NP_490544.1 mutagenesis by UV and mutagens; related to umuDC operon (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIKMGVPWFQLRSAKFPEPVIAFSSNYALYASM
SNRVMVHLEELAPRVEQYSIDEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQWASKEWSQFG
GVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEE
APPPKQQIVCSRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAVTEPYYGNLASEKLLIPTQDT
RDIIAAAVRALDRIWVDGHRYAKAGCMLNDFTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEW
QMKRELLSPAYTTRWADIPAAKLT
>NP_490545.1 mutagenesis by UV and mutagens; related to umuDC operon (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDSMKEMGLHSGDLMVVDKAEK
PMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYPEELQIFGVVTAFIHKTRSTD
>NP_490559.1 putative transglycosylase (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MYKWLLSVLLVLMSTVVHAADCFDLAGRDYKIDPDLLRAISWKESRNRANAVGINPVTGYGSGLMQVDSQHFNELARYGI
KPEQLVSDPCLNIYTGAYYLAIAFRKWGVSWTAVGAYNAGFKKTPLQDARRLDYATDVHRIWIAIKQSKTRQTPAR
>NP_490590.1 homologue of mvpA, Shigella flexneri (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTLMELIYGAEKSQMPERNLAVIEGFVSRLDVLDYDTPAATHT
GQIRAELARQGRPVGPFDQMIAGHARSRGLIVVTNNTREFERVGGLRTEDWS
>NP_490591.1 putative cytoplasmic protein (plasmid) [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
MMETSVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAGESWDEWFDGNNVSADFMDNREQPSVQERESF
>NP_819020.1 helix-turn-helix domain containing protein (plasmid) [Coxiella burnetii RSA 493]
MKDSLITLKQLDQRLLALKEQGIHLTPKQGWVRTLRKALGLTIKQLAKRLSVDPSRVVKIETSEVKGAVTLRTLQSVAEA
LNCTFVYSFVPKTSLEDTVRNQARKVAKAQMERTAHTMELENQAIEKKWFEEQVEDLTDELLRKSWKHFWEE
>NP_819022.2 cell filamentation protein (plasmid) [Coxiella burnetii RSA 493]
MVSRQYFDLVEIATLDFVKKVHRRMFGKTWRWAGQFRTSNKNIGVDWVGIPVELRVLVDDLRYQLKNKSYPLDELAVRFH
HRLVAVHPFVNGNGRHARLMTDILLLSQGEKRFSWGRAEDLIVKSPVRKKYISALRAADKLDYAPLLTFVKER
>YP_009351855.1 hypothetical protein CBUA0003b (plasmid) [Coxiella burnetii RSA 493]
MGGFWSTEEGKLLGPIREFMRYNAKKNQPILACIKNV
>NP_819024.1 hypothetical protein CBUA0006 (plasmid) [Coxiella burnetii RSA 493]
MRMFRESKSEEKKSPSSQTAGLFATVPSLKDIMIDRLIEQLGGIAELNKQVVRDPRLWGAINERLTQHFLLLVVQGKQGQ
VEAMLKVNPALILFARGDVTDYSGQTFKNISAWEYVLWAYDSHMYRMLFNYIPKEQRPLALQQLIDLETNGIAYTLSEKV
MNAEREAEETRETIIREAHYDFSPLIDALQTYVTNVERWSFEECVEHWRKKVGGAQCMVPVHVGNEYCYPDRSFDPIPRF
NEKNLPRRHNFYNYVSGADESWFPLSPAGLGTNFAIMRGCMRAVAGACWRVGRQWACNDLAAITALREVRQSDLIQLKEQ
LQNPAPESAPSTSKTLRSKNP
>NP_819025.1 hypothetical protein CBUA0007 (plasmid) [Coxiella burnetii RSA 493]
MIRSYSSFRDRKKIKLTHTFLTSIGSLPDSVLNHSVGAFCDDNSLAFLAHTSQHHYTLFRKNKTGQLRKRAVNQLLLHVV
NGEQEEAEAMIANNHDLLLEIDQVPAYAQDTIVKETPFRVALAGEDDQMAAMIAAYLDEYYPGEKLEQYQAQFPAGEEKV
ENLRQEEDLIALQKIVTAISQASNNACEQMSNNEDNIAEDDEEMQRLAAVFYEFREHLKPKNTIETGKQFNIQLLIEAFK
LYDKNYEVFGGWNSHKNNLVWCKIIGYIQRFLPASYAQALSQGVNFIIEEGEILQRSFNFRFGIGKFFPLDLDPQIRLGY
DYAVAWPAVGGELLEKLYRAKTAALHRVTHSPCNPAVNLRD
>YP_009351856.1 hypothetical protein CBUA0007a (plasmid) [Coxiella burnetii RSA 493]
MFCMINFQEKINLALIKLLFNKIFTARIKILYL
>NP_819027.2 phage integrase family protein (plasmid) [Coxiella burnetii RSA 493]
MHEINELMEPLMKTVPLALFDSIENITAGNDYSYLKGIYDLDDIKIATKFLKSYKGSQGTFNSYRREIERLIHWCALITN
KSLKALKRDDIENFIYFCKKPPKTWIGETKPPRFIIKDGVRIPNPKWRPFIVKLSKIERRKGMDLDKNNFELSHGSLRES
FAILSSFFNYLLQEEYVDVNPVALIRQKSQFIRKTQGQPKIRRLSELQWQYVIKSAKSLAEQDPDIYERTLFIMSALYSM
YLRISELAATERWEPRMNHFHRDGDGSWWFITVGKGNKERQIAVSNAMLKALKRWRKHLGLTSLPSPADQSPLLPKNKGR
GPIKSTNYIRNIVQYCFDRAIDQLDQDGFSEEAEALNEATVHWLRHTGISDDVKIRPREHVRDDAGHSSSAITDRYIDIE
LRERHQSARKKTISDED
>NP_819028.1 hypothetical protein CBUA0011 (plasmid) [Coxiella burnetii RSA 493]
MPLDSGAPLKVAQENAGHSDIGTTMLYRHVAQTDRFEATRLLSLKKKVSSQNKDKV
>NP_819029.1 hypothetical protein CBUA0012 (plasmid) [Coxiella burnetii RSA 493]
MLQANLTFLGKTSVGPIMPRSYFGNAGAIQAPRIQKTATGEYTITFLTSRDIKETQPPAVHINFQDEVNGAFCSRLVKPV
QFTYHPENSQFPWKILFQIAVQKGDGSYTDSNIVMITFAMANCNNQAVFNSCKNRVNAELNSCKPDDWECIADANTALQN
CYLQCEPDLII
>NP_819030.1 hypothetical protein CBUA0013 (plasmid) [Coxiella burnetii RSA 493]
MPYFFTLPKIDIKEKSASQTPEKVLREWLRGASNQEDASLFIGNSPIFGEHQDTSGSSLPKVEIPEFINSIKAVEAVFKK
EGLKDEEILNYILHFGGINGYMTLGQVVFEEISMNKGKSSRMENRRYSYRVKNKGEVEYIEQFDFYKKNTCDRNEIGDFI
GQVKIVSIISKDGDIQHACKKVEIAVPGEKLNSFRKHFGDQLNFVNRMKLRLVELYNSLVERFRAAINKADRTNNNCFPF
CSR
>YP_009351857.1 hypothetical protein CBUA0013a (plasmid) [Coxiella burnetii RSA 493]
MNILTSSTENNKIALTCRIQPEDLDRKHPNKLGEKFLFYKK
>NP_819031.1 hypothetical protein CBUA0014 (plasmid) [Coxiella burnetii RSA 493]
MRKSSAKTNEDVSPSERDHLSELNPDTLKKIIHNLSARDSYSLSLSNKSLRNKVGAEFEHRAKTLNSDVKKLHLTIK
>NP_819032.2 hypothetical protein CBUA0015 (plasmid) [Coxiella burnetii RSA 493]
MSDVNDYWYAKNEKGQIRPEFKNCTVEWKEDFVPPGRFNHCRLEKVTFKNIAVSEEDDFFKGAELTDCSPSGATFANPSN
FGVVKAKDLKSDLGKWFNEDDESEPWFEREVNKERKLYENNRKIHRFEEENKRLKSENQQLKDELKLLKARNSEKEAGAS
FGESSKKRSLLNEGLEEERTSEDFGPSTSSASTRLNLSIFSSPKRETDSETETEEESTKTKNQIKLT
>NP_819033.1 CbhE (plasmid) [Coxiella burnetii RSA 493]
MRLEQPRNSLKRSTLDLIERVNRDEYPSLPQDSKCKDALVSAFRKTANFKKYNRPDVNSREQLISPSLTEEDLLGRIRQR
YKEKIFAGGQEKFADQSFIAEQIASTYEDFKDNPTLPAYCGEMTYLLYYHLREEGIKPENMLVVGFSANAEDHVLLMYSS
DEGFLEQIKNDYFEQEEEGEEAESYKNFIELCARRDKNQTLLLLDPWSQDNKILDLNQLDRDESTNEVIEDYFKNKREAL
EEGFQPHAIIDGVLEESRVSKATGSVINMETLSFQVDAFKPEELMEIDEENTSDSSEEGTSKNRFRDTLFSNVPDSSSDS
ENEQEREKKELAGKTPSFRLC
>NP_819034.1 hypothetical protein CBUA0017 (plasmid) [Coxiella burnetii RSA 493]
MDFFYPFLYAFCALFQWCFIFLFLMRGINIPSFFRRLFIIFLKGGVGASPEEPACSRDIFSPQFDYLS
>NP_819037.1 hypothetical protein CBUA0020 (plasmid) [Coxiella burnetii RSA 493]
MNDDEKKKLLEAYQNAVLIEPPKELPPIFVTPQTSDEPLQNLAITLSAFPIENRGGVQVFEVPKIADDCRSYVGRGYDAY
EDTAAKGPQGPAWKPDSTWVKLESIEDFACRKGFEKVYVYEGHHYARQWGDGTILEKLGSTHWGATPVVRLIDPHALIVK
KYYGEVKEIWIRPYLHGSVPIPYLRAQSSYRRGPFGNYHLFKSVYKKEIVIQKMTKDDWEPHYQWAKKEQQRQQQATAQF
FKPQEEKQQESKKFINSFLVRLCEVLRIFISDENREPRKIDPS
>NP_819038.2 hypothetical protein CBUA0021 (plasmid) [Coxiella burnetii RSA 493]
MQDEVLKYMGIKVQDLVPPPNNPTVSSNSVAFFVVRLANFSNTILPVFLDHVAKGNQVEVEKTLEQYGALLLWQEGQAET
YAKDLNGDPVIVRGTALQIALGAEDEDMVEVIVGFLDAVDPGEKYRQYQAQFPAEEEKAESLRQQEDLEALQTIVTAIGH
ASPRACAQVLDHEENISDNDDEAKTLLAALNVFRNDVKPKGVIKTGKQFNIQLLIQAFQFYDKNYETFGGFNSPKNNLCC
CKIIGYLQRFVPACYAQAFAQGIYYIVEGGEGLRRSFNFVLVMALIFRLTPFLIFVGDIIALGRDWDRGAAVRALGAHAG
RRWRPSRRFLENYVKQKQQQCKETCNNPATTPMPERTQ
>NP_819039.1 hypothetical protein CBUA0022 (plasmid) [Coxiella burnetii RSA 493]
MKNLKIIGKNPFCLQCAYGLTEKAKEQLQEDSPRQAAERFSREEKEFEFDKCAYWYAYIKGYDKTAQWLKDQDPHIEDGK
KEILRRILDSAVRSGDFETVDNA
>NP_819040.1 hypothetical protein CBUA0023 (plasmid) [Coxiella burnetii RSA 493]
MKDYVKEIDFQSIKNSNCAIEETLQEWLRGANSVEKAHIFIVSPENQSFPICSNQVSSANLFKLKIHDIKSVIINQFKVF
GLKSEPVINYILTYGGIDGYSSVGEACLFKFDSLMGVEIQPRNHKKTYVIHSENTVNYIEAFNLISLKERRVIGHFSAVS
EIKLSENGEIIHVCKEANLKMFKVKSKSQVLVETIRKNLFEFLKSFYQRICSLFNEQKNLRNRNTKMRGPGIG
>YP_009351858.1 hypothetical protein CBUA0023a (plasmid) [Coxiella burnetii RSA 493]
MSFSCFAFPNLGSQYKKRFSIRKLQDMVKEI
>NP_819041.1 hypothetical protein CBUA0024 (plasmid) [Coxiella burnetii RSA 493]
MLAAHLIFSGQIPIGPIDPDSYFGNPGAIMDPEIEKIATGKYTITLLSARNVQNTQPAVVHISVMDDANETFCPRVTKAL
KFTYEPQNSDFPWKGMLEIAITEGDGTAIDPKQVMVSIHAQNESVGADVTVGPTRAKAKVKVDVPHP
>NP_819042.1 hypothetical protein CBUA0025 (plasmid) [Coxiella burnetii RSA 493]
MNKPNDGVKFFMTDEEAALAILKKTNFFAQVVKNQKIGASTVDSLQWLRVECEKKCENLVNENRLSEKTKEGHTVYKELQ
RGKNFK
>NP_819043.1 hypothetical protein CBUA0026 (plasmid) [Coxiella burnetii RSA 493]
MIVYRSLVLTSEIPVCLKLKPVIPAPSSSPRRRGPSALRAQRAKSAPGLPMNYCVIMLKKMTAHSPMPQAKSLLLI
>NP_819044.2 putative DNA-binding protein (plasmid) [Coxiella burnetii RSA 493]
MMKDKKKKSKTRFKPLSPIEAVHESAKGLYDAGVIDATTMHEFDALCLTPVRELSPREIKRIRIHEKVSQAVFAKYLNTS
VSTVKQWELGEKHPRGTSLKLLNLVDRKGLQAIA
>NP_819045.2 hypothetical protein CBUA0028 (plasmid) [Coxiella burnetii RSA 493]
MTDGNLLEIGNEYRLTNSSLSDIVLTIREVMRIFKTRYFHRWAKSENLSDSQLKTAISELMKGLHDGDLGSYIYKKRIPI
LGKGKRGGLRTIIAYRAEDKAFFVYGYAKNVQANITPKEKEAYKKLSKTYFDMKELELQSLLKIGELIEVL
>NP_819047.1 hypothetical membrane spanning protein (plasmid) [Coxiella burnetii RSA 493]
MSIFGFHIAMSGLLFPFSFILLIVITETYGYRETGRAILIILLSQNILLILLSITARLPSPPNIPLSHEYYSLFSGVWRI
LISGNIAIPIAFFFNSLLNLKLKVYLKGTKWVVRFLLTNALSKGLLVFISYPINFFGVLPIKTVLHICLDTWLFKIVFCI
LTVWLIRLISEISSKVDSTDIYDINTNYSLLQLYSPKNSGMNLYGR
>NP_819048.1 3',5'-cyclic-nucleotide phosphodiesterase (plasmid) [Coxiella burnetii RSA 493]
MEDNCIKIAQVSDLHLTSENCETSRGRYSNAMNVFSAISLSGQHDMIFITGDISDDYTENSYKQLLEMLKKLTCRVFVIP
GNHDDVNLMNKIIPEKYLFSPETVTSFNTFDFLFVNTVVNGEIHGLLTDQDLSLFQNHLENSGNKKKCIIMHHNPIPLNR
KIYDKYMLLNYQDFLRIICLYDNVKLVIFGHVHNDYTISYRQTLFSSAPATCYQIKKFESDIIIEEKYGYKNYFLFEEFI
ETNCIWIK
>NP_819049.1 hypothetical protein CBUA0033 (plasmid) [Coxiella burnetii RSA 493]
MNPKDLLYLKGFFDDFNKNKQRIKLVAEYRNNEYGIACDQFEIRKIPGSSLCADLNLLGNMSIESAFVIIYKTAYLKGVA
DSKKSQFLEQKQQCYGKDTPTRLLRLVNNNVEGGKDN
>NP_819050.1 hypothetical protein CBUA0034 (plasmid) [Coxiella burnetii RSA 493]
MGAYFRQKNWIFKKKTLKYKNRSTFLYINLFEAEAVGIWMSIKLNIQFTRSFTERLQSTNTNPLMIKC
>NP_819051.2 chromosome partitioning protein (plasmid) [Coxiella burnetii RSA 493]
MEETFAVRDNVNVLKGKIMADIELKGLKGLRDLKSLANASKTNDFVAQNLYFLSIDLLQTGKYQPRKGWIKESLQELVNS
IKSQGIIQPLIVRQIQTNRYEIIAGERRWRAAKEAGLKKVPAIIRNVDDTTALAFALIENIQRENLNPIDEALAFSRLRD
EFSMSHAAISETVGRSRTAVTNILRLLSLDDSVKVLLQTDKLEMGHARALLTLPKDQQILFAQKIIDKNLTVREAEKLVQ
FAKTPKETKPAPYADEVQGWVNQLSRSLSSKIAININEKGEGKVIIHFTSPEEVDWLVEHFTDKAEE
>YP_009351859.1 hypothetical protein CBUA0036a (plasmid) [Coxiella burnetii RSA 493]
MKIKQLINCKQQKLIKKIKTRCVSFVNRNFIKKLHFHKKPDIF
>NP_819052.1 plasmid partition protein A (plasmid) [Coxiella burnetii RSA 493]
MLETQITPYGTETPEQLMDKFYQAGNEMLLTLRNYITSPDKRKKSRTWGAIEAAKMVGVSAPTFRKLLESDNEVPGIIIE
ENENGRKIKKYTLTAINNLREKAKTRYKRPKGSKPLTIAISNLKGGVGKTETAVDLGKKIAIEGLRSLLLDFDAQGTATL
ISSGLIPDLELRYEDTITNTLISDPNNIKNIVLKTHFDGFDIIPANLAIQDCDLILPNDKENNNDRLGSPFLRLAESLKI
IKNQYDVILIDCGPNLGLLTLNAIIACDGMIIPIPPSMNDYSSFIMYTATLRNMFRELSNKKLDYLRILLSKHNSSNEAL
QMENMMREQFGRYILSNHMCETVEVSKAANEIGTIYDVSKPRGSREAYRRALQHLDDVNMEIINNFKDIWKSQVKVLTTL
GETVNG
>NP_819053.1 DNA-binding protein (plasmid) [Coxiella burnetii RSA 493]
MDNSKRNIHNSGPLGMLMKNGQIKKIENSAESNEGTVVLNKAAPSYFKTQAGIEFTEHELIFVDPKECEPWEYANRQDEE
LGNINELIESIKSNKQLQPALIRKHPHPHDDVKYEIIFGRRRHIACLNLGIPFLAILKEIPNVQDAIAFQDAENKLRNDV
SNYSNAILYKRLIEEGVFKKEKDLAEKLRLSPSTLNDLMAYTKIPSAIVKKIPNIHALSKSIVLKIVQLLNKSSKNHAKL
IAIAPDIGKSITSPAKLESAVEKPVGSKTKQRLQATKQYKTKDGKKLFTFKIDHRGAPCIVLNKEILNRVDMDTMCEKIK
SQLEIELSQSGAPD
>NP_819054.2 plasmid replication initiation protein (plasmid) [Coxiella burnetii RSA 493]
MTPNPELPDWSLSQILMEKRMNLAVATDKRVELKKHVNAIHCSNNLTLVQRKLFNALLFNAYPELPYKLKFQISAKDLCK
LIGYNSNDYGKLKRALLGLITTAIEWNVIDCDTGKEKNWKASSILSAAQLAEGVCTYEYSHIMKELLFQPEIYGRIDVKT
MSKFKSSYGLALYENCIRYQRLSQTPWFPLDVFRKLMGVLGGKYTSFKDFKKRVLNIAVNEVNNLSQIQVLPEIERQNQK
VTKIRFKLNKKHLASSEKISNLINAELEETLTNTFSLSPLLIRDLLTEYDIAFIREKVNIIINSSSFQEGKIRGLSGYLI
DSLRKDYKASKSSQMLISEARMKRKLEEEAEKEREERRRNRYEKYVKDKINKYLTLLTDAEKDALVMDFEVELKSNKSNK
VFYSWYKKNGFEHVGVKACFHNFVKEHKKQHMGGILSFEEFISLVDEYT
>YP_009351860.1 hypothetical protein CBUA0039a (plasmid) [Coxiella burnetii RSA 493]
MDKIKSIPTRHKPNAQKKYRRSQANKGLVRFELQVRADAKKRFEAMVQAAAEEYPEPWNERQRMAKARARIFEEITQGTL
HEFFTLKEEIERLKEEVKTLSPQFFQSENIAPTPLPEAIRSLPDNPQQLKAILAKIYQTGLQAQLAVKEYKRRAEQYLKL
YEAASNSNEELKSRLKKEQDVTFED
