---------Data files for RGASP 2009 round 2----------

RNA-Seq input files for RGASP competition.

Data not to be used for publications without written
permission, see http://www.genome.gov/ENCODE/#3

Contact: Felix Kokocinski, fsk@sanger.ac.uk
     or: rgasp-comm@sanger.ac.uk

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HUMAN
=====
1. experiment: Homo sapiens polyA+ total RNA, paired reads, HepG2
   lab:        Wold lab, Caltech
   format:     fastq, tar archive with bzipped files
   other details: 75mer sequences, the last base has been removed
                  _1 & _2 are the corresponding pairs
                  includes spike-in sequences for quantification
                  quality scores are Sanger rather than Illumina
                  fragment length is 200bp with a std deviation of 34

WORM
====
1. experiment: Caenorhabditis elegans polyA+ total RNA, paired reads, L3 phase
   lab:        Sternberg lab/Wold lab, Caltech
   format:     fastq, tar archive with bzipped files
   other details: 75mer sequences, the last base has been removed
                  _1 & _2 are the corresponding pairs
                  includes spike-in sequences for quantification
                  quality scores are Sanger rather than Illumina
		  fragment length is 165bp with a standard deviation of 28

FLY
===
1. experiment: Drosophila melanogaster polyA+ total RNA, paired reads, L3 stage larvae
   lab:        Celniker lab, Lawrence Berkeley National Laboratory
   format:     fastq, tar archive with gzipped files
   other details: 76mer sequences
                  _1 & _2 are the corresponding pairs
                  produced on an Illumina Genome Analyzer II
                  fragment length is 250-300bp
		  low quality reads have been filtered out