File accession	File format	Output type	Experiment accession	Assay	Biosample term id	Biosample term name	Biosample type	Biosample life stage	Biosample sex	Biosample Age	Biosample organism	Biosample treatments	Biosample subcellular fraction term name	Biosample phase	Biosample synchronization stage	Experiment target	Antibody accession	Library made from	Library depleted in	Library extraction method	Library lysis method	Library crosslinking method	Experiment date released	Project	RBNS protein concentration	Library fragmentation method	Library size range	Biological replicate(s)	Technical replicate	Read length	Mapped read length	Run type	Paired end	Paired with	Derived from	Size	Lab	md5sum	dbxrefs	File download URL	Assembly	Platform	Controlled by	File Status	Audit WARNING	Audit INTERNAL_ACTION	Audit NOT_COMPLIANT	Audit ERROR
ENCFF001AEY	bigBed modPepMap	filtered modified peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1							197381	Morgan Giddings, UNC	ee1a0990709fe9f0d43b9875397a1d64		https://www.encodeproject.org/files/ENCFF001AEY/@@download/ENCFF001AEY.bigBed	hg19			released				
ENCFF001AEZ	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1							250934	Morgan Giddings, UNC	68306816359b4d9bf0720360a446aa0f		https://www.encodeproject.org/files/ENCFF001AEZ/@@download/ENCFF001AEZ.bigBed	hg19			released				
ENCFF001AFA	bigBed pepMap	filtered peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1							301465	Morgan Giddings, UNC	d027bd0d0a1a834f3d319983a938c027		https://www.encodeproject.org/files/ENCFF001AFA/@@download/ENCFF001AFA.bigBed	hg19			released				
ENCFF001AFB	bigBed pepMap	unfiltered peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1							522753	Morgan Giddings, UNC	09fe6947217901025f2853997f14940f		https://www.encodeproject.org/files/ENCFF001AFB/@@download/ENCFF001AFB.bigBed	hg19			released				
ENCFF782PBV	bed pepMap	unfiltered peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFB	307081	ENCODE Consortium	fbb8933bf6b85a4b27fafc3c495250ef		https://www.encodeproject.org/files/ENCFF782PBV/@@download/ENCFF782PBV.bed.gz	hg19			released				
ENCFF844ZGY	bed modPepMap	filtered modified peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEY	81801	ENCODE Consortium	f5a4df2d2de29ce76ac5e7a8c721abda		https://www.encodeproject.org/files/ENCFF844ZGY/@@download/ENCFF844ZGY.bed.gz	hg19			released				
ENCFF972XND	bed modPepMap	unfiltered modified peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEZ	114501	ENCODE Consortium	9460859fe91c21984e28f5bd63e76cd2		https://www.encodeproject.org/files/ENCFF972XND/@@download/ENCFF972XND.bed.gz	hg19			released				
ENCFF906KWT	bed pepMap	filtered peptide quantification	ENCSR327BIN	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		cytosol					DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFA	136174	ENCODE Consortium	84e629e79055af23c6de7ac34b0b56a6		https://www.encodeproject.org/files/ENCFF906KWT/@@download/ENCFF906KWT.bed.gz	hg19			released				
ENCFF001AGE	bigBed peptideMapping	unfiltered peptide quantification	ENCSR756IRM	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-29	ENCODE				1	1							350305	Morgan Giddings, UNC	5f3eb5ee31c6b4ac2a29e6751ef590d1		https://www.encodeproject.org/files/ENCFF001AGE/@@download/ENCFF001AGE.bigBed	hg19			released				
ENCFF001AGF	bigBed peptideMapping	filtered peptide quantification	ENCSR756IRM	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-29	ENCODE				1	1							236608	Morgan Giddings, UNC	5d96e3bad2f78631211daa6a3812c9d0		https://www.encodeproject.org/files/ENCFF001AGF/@@download/ENCFF001AGF.bigBed	hg19			released				
ENCFF206DFX	bed peptideMapping	unfiltered peptide quantification	ENCSR756IRM	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGE	128251	ENCODE Consortium	b7dd76b4c3bcff5ac229e0f497d6bf14		https://www.encodeproject.org/files/ENCFF206DFX/@@download/ENCFF206DFX.bed.gz	hg19			released				
ENCFF614XTI	bed peptideMapping	filtered peptide quantification	ENCSR756IRM	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGF	75483	ENCODE Consortium	d5b1fc515d3fb27b07de79170208029d		https://www.encodeproject.org/files/ENCFF614XTI/@@download/ENCFF614XTI.bed.gz	hg19			released				
ENCFF001AGA	bigBed peptideMapping	unfiltered peptide quantification	ENCSR612UOK	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2012-07-18	ENCODE				1	1							1983625	Morgan Giddings, UNC	e8aa0de8e4c31d2d5a606fbcfdfdaf4e		https://www.encodeproject.org/files/ENCFF001AGA/@@download/ENCFF001AGA.bigBed	hg19			released				
ENCFF001AGB	bigBed peptideMapping	filtered peptide quantification	ENCSR612UOK	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2012-07-18	ENCODE				1	1							1263106	Morgan Giddings, UNC	9df4d6e3d33aa5b9cc3c0f81d09f4e9f		https://www.encodeproject.org/files/ENCFF001AGB/@@download/ENCFF001AGB.bigBed	hg19			released				
ENCFF246UUN	bed peptideMapping	unfiltered peptide quantification	ENCSR612UOK	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2012-07-18	ENCODE				1	1						ENCFF001AGA	1312087	ENCODE Consortium	83b340bfe81e522305657364d62a5693		https://www.encodeproject.org/files/ENCFF246UUN/@@download/ENCFF246UUN.bed.gz	hg19			released				
ENCFF627NKB	bed peptideMapping	filtered peptide quantification	ENCSR612UOK	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2012-07-18	ENCODE				1	1						ENCFF001AGB	831372	ENCODE Consortium	6abaf405d496f2b38aa7557e8e9bb599		https://www.encodeproject.org/files/ENCFF627NKB/@@download/ENCFF627NKB.bed.gz	hg19			released				
ENCFF001AGC	bigBed peptideMapping	unfiltered peptide quantification	ENCSR048ZFC	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2011-09-29	ENCODE				1	1							543953	Morgan Giddings, UNC	ba5a125598d65d334351fdd0d474f7a2		https://www.encodeproject.org/files/ENCFF001AGC/@@download/ENCFF001AGC.bigBed	hg19			released				
ENCFF001AGD	bigBed peptideMapping	filtered peptide quantification	ENCSR048ZFC	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2011-09-29	ENCODE				1	1							335338	Morgan Giddings, UNC	18f34c95703708d04b70c1a547c88c03		https://www.encodeproject.org/files/ENCFF001AGD/@@download/ENCFF001AGD.bigBed	hg19			released				
ENCFF597DHS	bed peptideMapping	unfiltered peptide quantification	ENCSR048ZFC	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGC	254150	ENCODE Consortium	ce4c8d9e5e14422c839f801daa69b467		https://www.encodeproject.org/files/ENCFF597DHS/@@download/ENCFF597DHS.bed.gz	hg19			released				
ENCFF487TLY	bed peptideMapping	filtered peptide quantification	ENCSR048ZFC	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		membrane					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGD	128407	ENCODE Consortium	1b0211a9306828b8b4bda05e167f494e		https://www.encodeproject.org/files/ENCFF487TLY/@@download/ENCFF487TLY.bed.gz	hg19			released				
ENCFF001AGG	bigBed peptideMapping	unfiltered peptide quantification	ENCSR640PZU	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1							591164	Morgan Giddings, UNC	01d91e5d0113cc0dbdbc84a3c68d499e		https://www.encodeproject.org/files/ENCFF001AGG/@@download/ENCFF001AGG.bigBed	hg19			released				
ENCFF001AGH	bigBed peptideMapping	filtered peptide quantification	ENCSR640PZU	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1							364253	Morgan Giddings, UNC	d33f3c5ccb65bdc8de149e44569d9200		https://www.encodeproject.org/files/ENCFF001AGH/@@download/ENCFF001AGH.bigBed	hg19			released				
ENCFF745WHT	bed peptideMapping	filtered peptide quantification	ENCSR640PZU	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGH	161388	ENCODE Consortium	2d485291e888855098764d3f5787183a		https://www.encodeproject.org/files/ENCFF745WHT/@@download/ENCFF745WHT.bed.gz	hg19			released				
ENCFF152MLF	bed peptideMapping	unfiltered peptide quantification	ENCSR640PZU	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AGG	292486	ENCODE Consortium	2f321ff7ba91196e544ed396081a41ca		https://www.encodeproject.org/files/ENCFF152MLF/@@download/ENCFF152MLF.bed.gz	hg19			released				
ENCFF001AFK	bigBed modPepMap	filtered modified peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							6238907	Morgan Giddings, UNC	7c242a0ab539c58021b73d0cbc79db45		https://www.encodeproject.org/files/ENCFF001AFK/@@download/ENCFF001AFK.bigBed	hg19			released				
ENCFF001AFL	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							9352204	Morgan Giddings, UNC	554b3bb92175f7b9d6118b10bd312627		https://www.encodeproject.org/files/ENCFF001AFL/@@download/ENCFF001AFL.bigBed	hg19			released				
ENCFF001AFM	bigBed pepMap	filtered peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							6405047	Morgan Giddings, UNC	ff146378049b0f328a271188a4987f8e		https://www.encodeproject.org/files/ENCFF001AFM/@@download/ENCFF001AFM.bigBed	hg19			released				
ENCFF001AFN	bigBed pepMap	unfiltered peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							8846240	Morgan Giddings, UNC	77bfcb57f06bf6f6820787ae87c1bd09		https://www.encodeproject.org/files/ENCFF001AFN/@@download/ENCFF001AFN.bigBed	hg19			released				
ENCFF953DXA	bed pepMap	unfiltered peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFN	7021407	ENCODE Consortium	0881f1a101857b8d4d1e5884e84bb87f		https://www.encodeproject.org/files/ENCFF953DXA/@@download/ENCFF953DXA.bed.gz	hg19			released				
ENCFF355AWG	bed modPepMap	unfiltered modified peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFL	8237106	ENCODE Consortium	be9cb2543e49e4a0d9285d7bf550a2e0		https://www.encodeproject.org/files/ENCFF355AWG/@@download/ENCFF355AWG.bed.gz	hg19			released				
ENCFF794XCQ	bed pepMap	filtered peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFM	5033107	ENCODE Consortium	92cf4d90edc5add6186ee3db3add109e		https://www.encodeproject.org/files/ENCFF794XCQ/@@download/ENCFF794XCQ.bed.gz	hg19			released				
ENCFF450CXO	bed modPepMap	filtered modified peptide quantification	ENCSR818WRJ	protein sequencing by tandem mass spectrometry assay	CL:0002319	neural cell	in vitro differentiated cells	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFK	5362757	ENCODE Consortium	e139410c28890a0e2aa8a5de4f12072e		https://www.encodeproject.org/files/ENCFF450CXO/@@download/ENCFF450CXO.bed.gz	hg19			released				
ENCFF001AFU	bigBed peptideMapping	unfiltered peptide quantification	ENCSR558QVW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-30	ENCODE				1	1							1583179	Morgan Giddings, UNC	e3470688fea3394ab0fe48f8e2c2156c		https://www.encodeproject.org/files/ENCFF001AFU/@@download/ENCFF001AFU.bigBed	hg19			released		mismatched file status		
ENCFF001AFV	bigBed peptideMapping	filtered peptide quantification	ENCSR558QVW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-30	ENCODE				1	1							1056572	Morgan Giddings, UNC	5ff740420d17ca0d117a710cef7da824		https://www.encodeproject.org/files/ENCFF001AFV/@@download/ENCFF001AFV.bigBed	hg19			released		mismatched file status		
ENCFF344QYO	bed peptideMapping	unfiltered peptide quantification	ENCSR558QVW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		mitochondria					DNA		see document	see document		2011-09-30	ENCODE				1	1						ENCFF001AFU	1010515	ENCODE Consortium	6830286d3fdbe01f036550b81dd78c7e		https://www.encodeproject.org/files/ENCFF344QYO/@@download/ENCFF344QYO.bed.gz	hg19			released		mismatched file status		
ENCFF001AFY	bigBed peptideMapping	unfiltered peptide quantification	ENCSR193XVT	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		cytosol					DNA		see document	see document		2011-09-29	ENCODE				1	1							629300	Morgan Giddings, UNC	057fcf4cd5ebe8b43c45bc037d4e2484		https://www.encodeproject.org/files/ENCFF001AFY/@@download/ENCFF001AFY.bigBed	hg19			released				
ENCFF001AFZ	bigBed peptideMapping	filtered peptide quantification	ENCSR193XVT	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		cytosol					DNA		see document	see document		2011-09-29	ENCODE				1	1							411705	Morgan Giddings, UNC	9e9e807cd5d9f5449467e39dd6de9815		https://www.encodeproject.org/files/ENCFF001AFZ/@@download/ENCFF001AFZ.bigBed	hg19			released				
ENCFF568ZXQ	bed peptideMapping	filtered peptide quantification	ENCSR193XVT	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		cytosol					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AFZ	183344	ENCODE Consortium	7445d39af2c4d8f9d2544102e1373a03		https://www.encodeproject.org/files/ENCFF568ZXQ/@@download/ENCFF568ZXQ.bed.gz	hg19			released				
ENCFF530WWZ	bed peptideMapping	unfiltered peptide quantification	ENCSR193XVT	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens		cytosol					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AFY	302527	ENCODE Consortium	1d69fe77079081ebc7830657fa8b1aa6		https://www.encodeproject.org/files/ENCFF530WWZ/@@download/ENCFF530WWZ.bed.gz	hg19			released				
ENCFF001AEU	bigBed modPepMap	filtered modified peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							1544120	Morgan Giddings, UNC	44eeabbd5f5821c84a669d01c8402629		https://www.encodeproject.org/files/ENCFF001AEU/@@download/ENCFF001AEU.bigBed	hg19			released				
ENCFF001AEV	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							2228068	Morgan Giddings, UNC	12d7db7040c0be362e332b558d5b24ce		https://www.encodeproject.org/files/ENCFF001AEV/@@download/ENCFF001AEV.bigBed	hg19			released				
ENCFF001AEW	bigBed pepMap	filtered peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							2205501	Morgan Giddings, UNC	2e9b5c1434fd6ce8db6b1a961cab3a2f		https://www.encodeproject.org/files/ENCFF001AEW/@@download/ENCFF001AEW.bigBed	hg19			released				
ENCFF001AEX	bigBed pepMap	unfiltered peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							3137673	Morgan Giddings, UNC	40f113b3922f852a698435f5408fe1d8		https://www.encodeproject.org/files/ENCFF001AEX/@@download/ENCFF001AEX.bigBed	hg19			released				
ENCFF680CYL	bed modPepMap	filtered modified peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEU	1116819	ENCODE Consortium	48f5ef8c980caada011be9b4bba3feb1		https://www.encodeproject.org/files/ENCFF680CYL/@@download/ENCFF680CYL.bed.gz	hg19			released				
ENCFF536YMD	bed pepMap	unfiltered peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEX	2131155	ENCODE Consortium	29621cb801c0d7795cfb1170b3450116		https://www.encodeproject.org/files/ENCFF536YMD/@@download/ENCFF536YMD.bed.gz	hg19			released				
ENCFF787LHJ	bed pepMap	filtered peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEW	1460218	ENCODE Consortium	429ae16301cac912e68ee2d59989cac2		https://www.encodeproject.org/files/ENCFF787LHJ/@@download/ENCFF787LHJ.bed.gz	hg19			released				
ENCFF447OXW	bed modPepMap	unfiltered modified peptide quantification	ENCSR229NJU	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AEV	1690585	ENCODE Consortium	a7020fcd823819f99a8c60d0913bb395		https://www.encodeproject.org/files/ENCFF447OXW/@@download/ENCFF447OXW.bed.gz	hg19			released				
ENCFF001AFS	bigBed peptideMapping	unfiltered peptide quantification	ENCSR650BMA	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		membrane					DNA		see document	see document		2011-09-30	ENCODE				1	1							1205412	Morgan Giddings, UNC	82c797f4d04cf40fd2d19c053e4f9c18		https://www.encodeproject.org/files/ENCFF001AFS/@@download/ENCFF001AFS.bigBed	hg19			released				
ENCFF001AFT	bigBed peptideMapping	filtered peptide quantification	ENCSR650BMA	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		membrane					DNA		see document	see document		2011-09-30	ENCODE				1	1							602801	Morgan Giddings, UNC	48c09551c9e1243136c5b7c767b7d7da		https://www.encodeproject.org/files/ENCFF001AFT/@@download/ENCFF001AFT.bigBed	hg19			released				
ENCFF705ILU	bed peptideMapping	filtered peptide quantification	ENCSR650BMA	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		membrane					DNA		see document	see document		2011-09-30	ENCODE				1	1						ENCFF001AFT	316020	ENCODE Consortium	c96850b432897ef621bb8f01f067a2a5		https://www.encodeproject.org/files/ENCFF705ILU/@@download/ENCFF705ILU.bed.gz	hg19			released				
ENCFF609OUD	bed peptideMapping	unfiltered peptide quantification	ENCSR650BMA	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		membrane					DNA		see document	see document		2011-09-30	ENCODE				1	1						ENCFF001AFS	711454	ENCODE Consortium	37181ce9a8de0d4bd0f50f6fb358a56d		https://www.encodeproject.org/files/ENCFF609OUD/@@download/ENCFF609OUD.bed.gz	hg19			released				
ENCFF001AFO	bigBed modPepMap	filtered modified peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							1160652	Morgan Giddings, UNC	c0f29940fa26bd6435a05c0727a13aed		https://www.encodeproject.org/files/ENCFF001AFO/@@download/ENCFF001AFO.bigBed	hg19			released		mismatched file status		
ENCFF001AFP	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							2073064	Morgan Giddings, UNC	973654c0eacf2baad52212eb5faf533c		https://www.encodeproject.org/files/ENCFF001AFP/@@download/ENCFF001AFP.bigBed	hg19			released		mismatched file status		
ENCFF001AFQ	bigBed pepMap	filtered peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							1849186	Morgan Giddings, UNC	ffccac776253fadd4057d36584da6d05		https://www.encodeproject.org/files/ENCFF001AFQ/@@download/ENCFF001AFQ.bigBed	hg19			released		mismatched file status		
ENCFF001AFR	bigBed pepMap	unfiltered peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							2681389	Morgan Giddings, UNC	83774503af176fc99ffa321e7e924e06		https://www.encodeproject.org/files/ENCFF001AFR/@@download/ENCFF001AFR.bigBed	hg19			released		mismatched file status		
ENCFF269LHT	bed pepMap	filtered peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFQ	1232673	ENCODE Consortium	0f38e066994ff72a40e3ebceead4dcb0		https://www.encodeproject.org/files/ENCFF269LHT/@@download/ENCFF269LHT.bed.gz	hg19			released		mismatched file status		
ENCFF499OBQ	bed modPepMap	unfiltered modified peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFP	1607254	ENCODE Consortium	1097200a426e25b0714a60a39bfe0d43		https://www.encodeproject.org/files/ENCFF499OBQ/@@download/ENCFF499OBQ.bed.gz	hg19			released		mismatched file status		
ENCFF742UYM	bed pepMap	unfiltered peptide quantification	ENCSR901QEL	protein sequencing by tandem mass spectrometry assay	EFO:0002067	K562	immortalized cell line	adult	female	53 year	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFR	1876168	ENCODE Consortium	0c665b0187e2099946b8edcf0e98e28a		https://www.encodeproject.org/files/ENCFF742UYM/@@download/ENCFF742UYM.bed.gz	hg19			released		mismatched file status		
ENCFF001AFW	bigBed peptideMapping	unfiltered peptide quantification	ENCSR935KWW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1							3635632	Morgan Giddings, UNC	e8ddd3772d665ccef39a3ae1681f037c		https://www.encodeproject.org/files/ENCFF001AFW/@@download/ENCFF001AFW.bigBed	hg19			released				
ENCFF001AFX	bigBed peptideMapping	filtered peptide quantification	ENCSR935KWW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1							2694005	Morgan Giddings, UNC	a92322ea1c90ac46e0ee050231ae37be		https://www.encodeproject.org/files/ENCFF001AFX/@@download/ENCFF001AFX.bigBed	hg19			released				
ENCFF426CAV	bed peptideMapping	filtered peptide quantification	ENCSR935KWW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AFX	1250628	ENCODE Consortium	bf408c5f889c24c4f7dccb1e6b9d1ecc		https://www.encodeproject.org/files/ENCFF426CAV/@@download/ENCFF426CAV.bed.gz	hg19			released				
ENCFF590YTZ	bed peptideMapping	unfiltered peptide quantification	ENCSR935KWW	protein sequencing by tandem mass spectrometry assay	EFO:0002784	GM12878	immortalized cell line	adult	female	unknown	Homo sapiens		nucleus					DNA		see document	see document		2011-09-29	ENCODE				1	1						ENCFF001AFW	1865710	ENCODE Consortium	4d117c3fc2397251d3d8ca1663b8d5de		https://www.encodeproject.org/files/ENCFF590YTZ/@@download/ENCFF590YTZ.bed.gz	hg19			released				
ENCFF001AFC	bigBed modPepMap	filtered modified peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							471944	Morgan Giddings, UNC	236ed7553c31494c478d30f3c4b4350a		https://www.encodeproject.org/files/ENCFF001AFC/@@download/ENCFF001AFC.bigBed	hg19			released		mismatched file status		
ENCFF001AFD	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							642183	Morgan Giddings, UNC	68414caf367b92821519c8f8b95a093c		https://www.encodeproject.org/files/ENCFF001AFD/@@download/ENCFF001AFD.bigBed	hg19			released		mismatched file status		
ENCFF001AFE	bigBed pepMap	filtered peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							1983605	Morgan Giddings, UNC	69da7e343cd62365e4047d23a8ebecfc		https://www.encodeproject.org/files/ENCFF001AFE/@@download/ENCFF001AFE.bigBed	hg19			released		mismatched file status		
ENCFF001AFF	bigBed pepMap	unfiltered peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							2654004	Morgan Giddings, UNC	027ee63b8a9e908c27f63c3de04f0dba		https://www.encodeproject.org/files/ENCFF001AFF/@@download/ENCFF001AFF.bigBed	hg19			released		mismatched file status		
ENCFF625CUG	bed modPepMap	unfiltered modified peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFD	422153	ENCODE Consortium	a165748cf581f93f27e02d6296de1d7b		https://www.encodeproject.org/files/ENCFF625CUG/@@download/ENCFF625CUG.bed.gz	hg19			released		mismatched file status		
ENCFF840VKO	bed modPepMap	filtered modified peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFC	273636	ENCODE Consortium	8697625802bc67e3501477790b43dcf1		https://www.encodeproject.org/files/ENCFF840VKO/@@download/ENCFF840VKO.bed.gz	hg19			released		mismatched file status		
ENCFF513GNE	bed pepMap	unfiltered peptide quantification	ENCSR291STV	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFF	1874808	ENCODE Consortium	d6d278371e4815916118d4e63e5d8852		https://www.encodeproject.org/files/ENCFF513GNE/@@download/ENCFF513GNE.bed.gz	hg19			released		mismatched file status		
ENCFF001AFG	bigBed modPepMap	filtered modified peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							5810462	Morgan Giddings, UNC	adcec5a8cf5dd2afc0e6e710ec9120a7		https://www.encodeproject.org/files/ENCFF001AFG/@@download/ENCFF001AFG.bigBed	hg19			released		mismatched file status		
ENCFF001AFH	bigBed modPepMap	unfiltered modified peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							8047392	Morgan Giddings, UNC	f7d50df97d48c68e98335be5a8484a1e		https://www.encodeproject.org/files/ENCFF001AFH/@@download/ENCFF001AFH.bigBed	hg19			released		mismatched file status		
ENCFF001AFI	bigBed pepMap	filtered peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							7465487	Morgan Giddings, UNC	e9c74319bfe878c057200d57811dc55a		https://www.encodeproject.org/files/ENCFF001AFI/@@download/ENCFF001AFI.bigBed	hg19			released		mismatched file status		
ENCFF001AFJ	bigBed pepMap	unfiltered peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1							10028101	Morgan Giddings, UNC	aff6a4c671c3c342a88955ac0c9e6e00		https://www.encodeproject.org/files/ENCFF001AFJ/@@download/ENCFF001AFJ.bigBed	hg19			released		mismatched file status		
ENCFF106AWZ	bed modPepMap	unfiltered modified peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFH	6938000	ENCODE Consortium	81aad634e17cde8dd07a9e16eb739941		https://www.encodeproject.org/files/ENCFF106AWZ/@@download/ENCFF106AWZ.bed.gz	hg19			released		mismatched file status		
ENCFF129YJS	bed pepMap	filtered peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFI	5931593	ENCODE Consortium	dcb646984635b390de51a438ade8c580		https://www.encodeproject.org/files/ENCFF129YJS/@@download/ENCFF129YJS.bed.gz	hg19			released		mismatched file status		
ENCFF320BEL	bed modPepMap	filtered modified peptide quantification	ENCSR222NIE	protein sequencing by tandem mass spectrometry assay	EFO:0003042	H1-hESC	stem cell	embryonic	male	unknown	Homo sapiens							DNA		see document	see document		2012-09-11	ENCODE				1	1						ENCFF001AFG	4906810	ENCODE Consortium	43d0f84ce7ac98803440096ee807b607		https://www.encodeproject.org/files/ENCFF320BEL/@@download/ENCFF320BEL.bed.gz	hg19			released		mismatched file status		
