#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B intact:EBI-27058935 intenz:3.1.13 - intact:EBI-25564924|intact:EBI-25492032|reactome:R-COV-9694688|wwpdb:7diy|wwpdb:7mc6|wwpdb:7mc5|wwpdb:7n0c|emdb:EMD-24103|wwpdb:7n0d|emdb:EMD-24104|wwpdb:7n0b|emdb:EMD-24102 psi-mi:t35p31(display_short)|psi-mi:EBI-27058935(display_long) psi-mi:nsp10-nsp14_sars2-1(display_short)|psi-mi:3.1.13(display_long)|intact:SARS-CoV-2 3'-5' exoribonuclease proof-reading complex(complex recommended name)|intact:"NSP10:NSP14"(complex systematic name)|intact:SARS-CoV-2 NSP14/NSP10 complex(complex synonym) psi-mi:"MI:0410"(3D electron microscopy) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:-1(in vitro)|taxid:-1(In vitro) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27058913|imex:IM-29156-1|wwpdb:7N0B|emdb:EMD-24102 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:2359"(ds rna) psi-mi:"MI:1302"(stable complex) refseq:NC_045512.2(see-also) go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:1905354"(exoribonuclease complex)|pubmed:31440227(see-also)|pubmed:29279395(see-also)|efo:"EFO:0000694"(see-also)|pubmed:32015508(see-also)|pubmed:31987001(see-also)|complex portal:CPX-5692(complex-primary)|evidence ontology:"ECO:0000353"|pubmed:33821277(see-also)|intact:EBI-26971334(exp-evidence) - comment:"residues 29839-29870 from NC_045512.2 (3' region minus polyA tail)" curated-complex:"The SARS-CoV-2 coronavirus 3'-5' exoribonuclease complex which strictly targets double-stranded RNA and can selectively remove a mismatched ribonucleotide at the 3'-end of a dsRNA substrate. Formation of the NSP10-NSP14 complex strongly enhances the exonuclease activity of the bifunctional NSP14 and enhances the fidelity of RNA synthesis by correcting nucleotide incorporation errors made by the RNA-dependent RNA polymerase. May bind to, and act with the nsp7/nsp8/nsp12 polymerase complex (CPX-5742). Proof-reading exonuclease activity may explain why coronaviruses have the largest RNA genomes known to date. Complex formation does not appear to effect the C-terminal N7-methyltransferase activity of NSP14 involved in RNA cap modification."|disease:"Severe acute respiratory syndrome (SARS) [EFO:0000694]: A viral respiratory infection caused by the SARS coronavirus. It is transmitted through close person-to-person contact. It is manifested with high fever, headache, dry cough and myalgias. It may progress to pneumonia and cause death."|complex-properties:NSP10 forms a homododecamer in isolation. A flexible N-terminal domain of NSP14 forms the NSP10 docking site and induces conformational changes in the NSP14 that modulate the distance between the catalytic residues. figure legend:Table S1|comment:"PDBe entries 7n0b and 7n0d appear to have 4 rather than the stated 3 guanine residues at the 5' terminus of the T-strand RNA;the authors state that \"5'-end non-templated nucleotide addition by T7 RNAP has been observed when there are multiple initiating guanosines in the RNA transcript\"."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 - - - false RNA chemical modification:1-1|RNA chemical modification:2-3 his tag:n-n 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) intact:EBI-27058935 intenz:3.1.13 - intact:EBI-25564924|intact:EBI-25492032|reactome:R-COV-9694688|wwpdb:7diy|wwpdb:7mc6|wwpdb:7mc5|wwpdb:7n0c|emdb:EMD-24103|wwpdb:7n0d|emdb:EMD-24104|wwpdb:7n0b|emdb:EMD-24102 psi-mi:t35p31(display_short)|psi-mi:EBI-27058935(display_long) psi-mi:nsp10-nsp14_sars2-1(display_short)|psi-mi:3.1.13(display_long)|intact:SARS-CoV-2 3'-5' exoribonuclease proof-reading complex(complex recommended name)|intact:"NSP10:NSP14"(complex systematic name)|intact:SARS-CoV-2 NSP14/NSP10 complex(complex synonym) psi-mi:"MI:0410"(3D electron microscopy) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:-1(in vitro)|taxid:-1(In vitro) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27058964|imex:IM-29156-3|wwpdb:7n0d|emdb:EMD-24104|wwpdb:7n0c|emdb:EMD-24103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:2359"(ds rna) psi-mi:"MI:1302"(stable complex) refseq:NC_045512.2(see-also) go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:1905354"(exoribonuclease complex)|pubmed:31440227(see-also)|pubmed:29279395(see-also)|efo:"EFO:0000694"(see-also)|pubmed:32015508(see-also)|pubmed:31987001(see-also)|complex portal:CPX-5692(complex-primary)|evidence ontology:"ECO:0000353"|pubmed:33821277(see-also)|intact:EBI-26971334(exp-evidence) - comment:"residues 29839-29870 from NC_045512.2 (3' region minus polyA tail)" curated-complex:"The SARS-CoV-2 coronavirus 3'-5' exoribonuclease complex which strictly targets double-stranded RNA and can selectively remove a mismatched ribonucleotide at the 3'-end of a dsRNA substrate. Formation of the NSP10-NSP14 complex strongly enhances the exonuclease activity of the bifunctional NSP14 and enhances the fidelity of RNA synthesis by correcting nucleotide incorporation errors made by the RNA-dependent RNA polymerase. May bind to, and act with the nsp7/nsp8/nsp12 polymerase complex (CPX-5742). Proof-reading exonuclease activity may explain why coronaviruses have the largest RNA genomes known to date. Complex formation does not appear to effect the C-terminal N7-methyltransferase activity of NSP14 involved in RNA cap modification."|disease:"Severe acute respiratory syndrome (SARS) [EFO:0000694]: A viral respiratory infection caused by the SARS coronavirus. It is transmitted through close person-to-person contact. It is manifested with high fever, headache, dry cough and myalgias. It may progress to pneumonia and cause death."|complex-properties:NSP10 forms a homododecamer in isolation. A flexible N-terminal domain of NSP14 forms the NSP10 docking site and induces conformational changes in the NSP14 that modulate the distance between the catalytic residues. figure legend:Table S1|comment:"PDBe entries 7n0b and 7n0d appear to have 4 rather than the stated 3 guanine residues at the 5' terminus of the T-strand RNA;the authors state that \"5'-end non-templated nucleotide addition by T7 RNAP has been observed when there are multiple initiating guanosines in the RNA transcript\"."|comment:"The \"P\" strand in the 7n0d PDBe entry has a different 5' sequence to that in entry 7n0b and 7n0c. The same sequence as in entries 7n0b and 7n0c has been used here."|comment:Entry 7n0d refers to a higher order oligomer. [Entry 7n0d shows well-resolved densities for five consecutive pyrimidine nucleotides in the substrate-binding pockets of protomers B and D;the exact source and identify of the second RNA substrate molecule are unclear.]|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 - - - false RNA chemical modification:1-1|RNA chemical modification:2-3 mutation:191-191|his tag:n-n - - psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) intact:EBI-27058935 intenz:3.1.13 - intact:EBI-25564924|intact:EBI-25492032|reactome:R-COV-9694688|wwpdb:7diy|wwpdb:7mc6|wwpdb:7mc5|wwpdb:7n0c|emdb:EMD-24103|wwpdb:7n0d|emdb:EMD-24104|wwpdb:7n0b|emdb:EMD-24102 psi-mi:t35p31(display_short)|psi-mi:EBI-27058935(display_long) psi-mi:nsp10-nsp14_sars2-1(display_short)|psi-mi:3.1.13(display_long)|intact:SARS-CoV-2 3'-5' exoribonuclease proof-reading complex(complex recommended name)|intact:"NSP10:NSP14"(complex systematic name)|intact:SARS-CoV-2 NSP14/NSP10 complex(complex synonym) psi-mi:"MI:0410"(3D electron microscopy) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:-1(in vitro)|taxid:-1(In vitro) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059022|imex:IM-29156-7|wwpdb:7n0c|emdb:EMD-24103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:2359"(ds rna) psi-mi:"MI:1302"(stable complex) refseq:NC_045512.2(see-also) go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:1905354"(exoribonuclease complex)|pubmed:31440227(see-also)|pubmed:29279395(see-also)|efo:"EFO:0000694"(see-also)|pubmed:32015508(see-also)|pubmed:31987001(see-also)|complex portal:CPX-5692(complex-primary)|evidence ontology:"ECO:0000353"|pubmed:33821277(see-also)|intact:EBI-26971334(exp-evidence) - comment:"residues 29839-29870 from NC_045512.2 (3' region minus polyA tail)" curated-complex:"The SARS-CoV-2 coronavirus 3'-5' exoribonuclease complex which strictly targets double-stranded RNA and can selectively remove a mismatched ribonucleotide at the 3'-end of a dsRNA substrate. Formation of the NSP10-NSP14 complex strongly enhances the exonuclease activity of the bifunctional NSP14 and enhances the fidelity of RNA synthesis by correcting nucleotide incorporation errors made by the RNA-dependent RNA polymerase. May bind to, and act with the nsp7/nsp8/nsp12 polymerase complex (CPX-5742). Proof-reading exonuclease activity may explain why coronaviruses have the largest RNA genomes known to date. Complex formation does not appear to effect the C-terminal N7-methyltransferase activity of NSP14 involved in RNA cap modification."|disease:"Severe acute respiratory syndrome (SARS) [EFO:0000694]: A viral respiratory infection caused by the SARS coronavirus. It is transmitted through close person-to-person contact. It is manifested with high fever, headache, dry cough and myalgias. It may progress to pneumonia and cause death."|complex-properties:NSP10 forms a homododecamer in isolation. A flexible N-terminal domain of NSP14 forms the NSP10 docking site and induces conformational changes in the NSP14 that modulate the distance between the catalytic residues. figure legend:Table S1|comment:"The \"P\" strand in the 7n0d PDBe entry has a different 5' sequence to that in entry 7n0b and 7n0c. The same sequence as in entries 7n0b and 7n0c has been used here."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 - - - false RNA chemical modification:2-3 mutation:191-191|his tag:n-n 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:P0DTD1-PRO_0000449628 uniprotkb:P0DTD1-PRO_0000449631 intact:EBI-25475880 intact:EBI-25475920 psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p0dtd1-pro_0000449631(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059005|imex:IM-29156-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - chain-seq-start:4254|chain-seq-end:4392 chain-seq-start:5926|chain-seq-end:6452 figure legend:1B|agonist:"MgCl2 (CHEBI:6636 )"|antagonist:"CaCl2 (CHEBI:3312)"|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 rogid:LpGB5BQU5uhWK/60422jkiKHRL82697049 - false - mutation disrupting interaction rate:191-191|his tag:n-n - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 intact:EBI-27058935 intact:EBI-25475880 - psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:t35p31(display_short)|psi-mi:EBI-27058935(display_long) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059005|imex:IM-29156-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:2359"(ds rna) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) refseq:NC_045512.2(see-also) - chain-seq-start:4254|chain-seq-end:4392 comment:"residues 29839-29870 from NC_045512.2 (3' region minus polyA tail)" figure legend:1B|agonist:"MgCl2 (CHEBI:6636 )"|antagonist:"CaCl2 (CHEBI:3312)"|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 - - false - RNA chemical modification:2-3 - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 uniprotkb:P0DTD1-PRO_0000449631 intact:EBI-25475880 intact:EBI-25475920 psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p0dtd1-pro_0000449631(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059052|imex:IM-29156-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - chain-seq-start:4254|chain-seq-end:4392 chain-seq-start:5926|chain-seq-end:6452 figure legend:4B|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 rogid:LpGB5BQU5uhWK/60422jkiKHRL82697049 - false - mutation disrupting interaction rate:191-191|his tag:n-n - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 intact:EBI-27059066 intact:EBI-25475880 - psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p32-1(display_short)|psi-mi:EBI-27059066(display_long) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059052|imex:IM-29156-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - - chain-seq-start:4254|chain-seq-end:4392 - figure legend:4B|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 - - false - mutation with no effect:32-32|mutation decreasing interaction rate:32-32|mutation decreasing interaction rate:32-32 - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449626 uniprotkb:P0DTD1-PRO_0000449628 intact:EBI-25475874 intact:EBI-25475880 psi-mi:p0dtd1-pro_0000449626(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059092|imex:IM-29156-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - chain-seq-start:3943|chain-seq-end:4140 chain-seq-start:4254|chain-seq-end:4392 figure legend:S5B|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:Bxev1BKtZTT1Fyf+lpsPapVosnc2697049 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 - false - - - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449626 uniprotkb:P0DTD1-PRO_0000449631 intact:EBI-25475874 intact:EBI-25475920 psi-mi:p0dtd1-pro_0000449626(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p0dtd1-pro_0000449631(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059092|imex:IM-29156-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - chain-seq-start:3943|chain-seq-end:4140 chain-seq-start:5926|chain-seq-end:6452 figure legend:S5B|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:Bxev1BKtZTT1Fyf+lpsPapVosnc2697049 rogid:LpGB5BQU5uhWK/60422jkiKHRL82697049 - false - his tag:n-n - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449626 intact:EBI-27058935 intact:EBI-25475874 - psi-mi:p0dtd1-pro_0000449626(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:t35p31(display_short)|psi-mi:EBI-27058935(display_long) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059092|imex:IM-29156-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0840"(stimulator) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:2359"(ds rna) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) refseq:NC_045512.2(see-also) - chain-seq-start:3943|chain-seq-end:4140 comment:"residues 29839-29870 from NC_045512.2 (3' region minus polyA tail)" figure legend:S5B|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:Bxev1BKtZTT1Fyf+lpsPapVosnc2697049 - - false - RNA chemical modification:2-3 - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 uniprotkb:P0DTD1-PRO_0000449631 intact:EBI-25475880 intact:EBI-25475920 psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p0dtd1-pro_0000449631(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059107|imex:IM-29156-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - chain-seq-start:4254|chain-seq-end:4392 chain-seq-start:5926|chain-seq-end:6452 figure legend:Supp. figure 9|comment:"It is stated that \"T45 corresponds to the 3'-end 44 nt of SARS-CoV-2 genome followed by a CMP\";however even after removing several residues from both 3' and 5' sequences, no match to any SARS2 sequence was found on Blasting."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 rogid:LpGB5BQU5uhWK/60422jkiKHRL82697049 - false - mutation disrupting interaction rate:191-191|his tag:n-n - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 intact:EBI-27059066 intact:EBI-25475880 - psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:p32-1(display_short)|psi-mi:EBI-27059066(display_long) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059107|imex:IM-29156-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - - chain-seq-start:4254|chain-seq-end:4392 - figure legend:Supp. figure 9|comment:"It is stated that \"T45 corresponds to the 3'-end 44 nt of SARS-CoV-2 genome followed by a CMP\";however even after removing several residues from both 3' and 5' sequences, no match to any SARS2 sequence was found on Blasting."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 - - false - sufficient binding region:1-32 - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449628 intact:EBI-27059122 intact:EBI-25475880 - psi-mi:p0dtd1-pro_0000449628(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:t45(display_short)|psi-mi:EBI-27059122(display_long) psi-mi:"MI:0990"(cleavage assay) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:-1(in vitro)|taxid:-1(In vitro) psi-mi:"MI:0194"(cleavage reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-27059107|imex:IM-29156-15 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) - - chain-seq-start:4254|chain-seq-end:4392 - figure legend:Supp. figure 9|comment:"It is stated that \"T45 corresponds to the 3'-end 44 nt of SARS-CoV-2 genome followed by a CMP\";however even after removing several residues from both 3' and 5' sequences, no match to any SARS2 sequence was found on Blasting."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:L4eD+20oc1IdNFJ9By3H2uun6L02697049 - - false - sufficient binding region:1-45|biotin tag:1-1 - - psi-mi:"MI:0820"(molecular weight estimation by sybr staining) psi-mi:"MI:0820"(molecular weight estimation by sybr staining) uniprotkb:P0DTD1-PRO_0000449626 intenz:3.1.13 intact:EBI-25475874 intact:EBI-25564924|intact:EBI-25492032|reactome:R-COV-9694688|wwpdb:7diy|wwpdb:7mc6|wwpdb:7mc5|wwpdb:7n0c|emdb:EMD-24103|wwpdb:7n0d|emdb:EMD-24104|wwpdb:7n0b|emdb:EMD-24102 psi-mi:p0dtd1-pro_0000449626(display_long)|uniprotkb:rep(gene name)|psi-mi:rep(display_short)|uniprotkb:ORF1ab polyprotein(gene name synonym)|uniprotkb:1a-1b(orf name) psi-mi:nsp10-nsp14_sars2-1(display_short)|psi-mi:3.1.13(display_long)|intact:SARS-CoV-2 3'-5' exoribonuclease proof-reading complex(complex recommended name)|intact:"NSP10:NSP14"(complex systematic name)|intact:SARS-CoV-2 NSP14/NSP10 complex(complex synonym) psi-mi:"MI:0071"(molecular sieving) Liu et al. (2021) imex:IM-29156|pubmed:34315827 taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) taxid:2697049(SARS-CoV-2)|taxid:2697049(SARS-CoV-2) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-27059072|imex:IM-29156-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:1302"(stable complex) intact:EBI-25492095(chain-parent)|uniprotkb:P0DTD1(chain-parent) go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0039694"(viral RNA genome replication)|go:"GO:1905354"(exoribonuclease complex)|pubmed:31440227(see-also)|pubmed:29279395(see-also)|efo:"EFO:0000694"(see-also)|pubmed:32015508(see-also)|pubmed:31987001(see-also)|complex portal:CPX-5692(complex-primary)|evidence ontology:"ECO:0000353"|pubmed:33821277(see-also)|intact:EBI-26971334(exp-evidence) - chain-seq-start:3943|chain-seq-end:4140 curated-complex:"The SARS-CoV-2 coronavirus 3'-5' exoribonuclease complex which strictly targets double-stranded RNA and can selectively remove a mismatched ribonucleotide at the 3'-end of a dsRNA substrate. Formation of the NSP10-NSP14 complex strongly enhances the exonuclease activity of the bifunctional NSP14 and enhances the fidelity of RNA synthesis by correcting nucleotide incorporation errors made by the RNA-dependent RNA polymerase. May bind to, and act with the nsp7/nsp8/nsp12 polymerase complex (CPX-5742). Proof-reading exonuclease activity may explain why coronaviruses have the largest RNA genomes known to date. Complex formation does not appear to effect the C-terminal N7-methyltransferase activity of NSP14 involved in RNA cap modification."|disease:"Severe acute respiratory syndrome (SARS) [EFO:0000694]: A viral respiratory infection caused by the SARS coronavirus. It is transmitted through close person-to-person contact. It is manifested with high fever, headache, dry cough and myalgias. It may progress to pneumonia and cause death."|complex-properties:NSP10 forms a homododecamer in isolation. A flexible N-terminal domain of NSP14 forms the NSP10 docking site and induces conformational changes in the NSP14 that modulate the distance between the catalytic residues. figure legend:Supp. figure 1A,2A|comment:"nsp8 co-eluted with the nsp10-nsp14-RNA complex on the SEC column:association of nsp8 with the nsp10-nsp14-RNA complex is weak."|dataset:Virus - Publications including interactions involving viral proteins|dataset:Coronavirus - Interactions investigated in the context of Coronavirus|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/01 2021/08/10 rogid:Bxev1BKtZTT1Fyf+lpsPapVosnc2697049 - - false his tag:c-c his tag:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)