#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:O65655 intact:EBI-26976751 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 tair:AT2G13540 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:abh1_arath_mrna(display_short)|psi-mi:EBI-26976751(display_long) psi-mi:"MI:1017"(rna immunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26976724|imex:IM-28999-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) - - - - figure legend:4f-g|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 - - false green fluorescent protein tag:?-? - - - psi-mi:"MI:1196"(quantitative reverse transcription pcr) psi-mi:"MI:1196"(quantitative reverse transcription pcr) uniprotkb:O65655 intact:EBI-26980517 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 tair:AT1G72770 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:hab1_arath_rna(display_short)|psi-mi:EBI-26980517(display_long) psi-mi:"MI:1017"(rna immunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26976724|imex:IM-28999-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0320"(ribonucleic acid) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) - - - - figure legend:4f-g|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 - - false green fluorescent protein tag:?-? - - - psi-mi:"MI:1196"(quantitative reverse transcription pcr) psi-mi:"MI:1196"(quantitative reverse transcription pcr) uniprotkb:O65655 uniprotkb:F4I2J8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-8454629|intact:MINT-8414393|uniprotkb:Q9ZWB1|ensemblplants:AT1G03910.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:catin_arath(display_long)|uniprotkb:CTN(gene name)|psi-mi:CTN(display_short)|uniprotkb:F21M11.16(orf name)|uniprotkb:At1g03910(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR018816|interpro:IPR019134|refseq:NP_001184904.1|refseq:NP_171887.1|mint:F4I2J8|ensemblplants:AT1G03910(gene)|ensemblplants:AT1G03910.2(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0045292"(mRNA cis splicing, via spliceosome) - - comment:mint figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:6cvwX4vDrmyOyN+3gGuSLj8jJho3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q56XG6 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3386856|uniprotkb:Q0WWC6|uniprotkb:Q3E9I7|uniprotkb:Q56YP8|uniprotkb:Q93VJ8|uniprotkb:Q9LFN9|uniprotkb:Q9ZS06|uniprotkb:C0Z3C4|uniprotkb:Q9LFN6 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:rh15_arath(display_long)|uniprotkb:UAP56 homolog A(gene name synonym)|uniprotkb:UAP56A(gene name synonym)|uniprotkb:F2I11.60(orf name)|uniprotkb:At5g11170(locus name)|uniprotkb:RH15(gene name)|psi-mi:RH15(display_short)|uniprotkb:RH56(gene name)|psi-mi:RH56(display_short)|uniprotkb:UAP56B(gene name synonym)|uniprotkb:F2I11.90(orf name)|uniprotkb:At5g11200(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) go:"GO:0005829"(cytosol)|go:"GO:0005730"(nucleolus)|go:"GO:0009506"(plasmodesma)|go:"GO:0005524"(ATP binding)|go:"GO:0046686"(response to cadmium ion)|refseq:NP_568244.2|refseq:NP_568245.1|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|interpro:IPR027417|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0051028"(mRNA transport)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0003727"(single-stranded RNA binding) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:PGErFBjvEqSmP1ZbKc/vpdc57OM3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178WKP3 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516605|ensemblplants:AT1G13690.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178wkp3_arath(display_long)|uniprotkb:AN1_LOCUS1484(orf name)|uniprotkb:C24_LOCUS1400(orf name)|uniprotkb:AXX17_At1g14230(locus name)|uniprotkb:AT9943_LOCUS1168(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G13690(gene)|ensemblplants:AT1G13690.1(transcript)|go:"GO:0003723"(RNA binding)|refseq:NP_563931.2|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034168|interpro:IPR035979|interpro:IPR000504(RNA recognition motif, RNP-1) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:boIWi5p2SCg0RogVeBpMejNUCkU3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178VUX9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988873|ensemblplants:AT2G43770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178vux9_arath(display_long)|uniprotkb:AN1_LOCUS10889(orf name)|uniprotkb:AT9943_LOCUS9357(orf name)|uniprotkb:AXX17_At2g41290(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G43770(gene)|ensemblplants:AT2G43770.1(transcript)|refseq:NP_181905.1|interpro:IPR024977|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:RKf5D+EC84rZA2yHtMedhNjN1R43702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9ZV45 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2133109|ensemblplants:AT2G18740.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9zv45_arath(display_long)|uniprotkb:At2g18740(locus name)|uniprotkb:Sm protein E(gene name synonym)|uniprotkb:MSF3.12(gene name)|psi-mi:MSF3.12(display_short)|uniprotkb:MSF3_12(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_179464.1|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR027078|ensemblplants:AT2G18740(gene)|ensemblplants:AT2G18740.1(transcript)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005829"(cytosol)|go:"GO:0008380"(RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048509"(regulation of meristem development)|go:"GO:0071011"(precatalytic spliceosome) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:ujBWxfvEvNZ68Q1mWweNjZSVuw03702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:B3H6J5 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988867|ensemblplants:AT3G49601.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:b3h6j5_arath(display_long)|uniprotkb:At3g49601(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G49601(gene)|ensemblplants:AT3G49601.1(transcript)|refseq:NP_001118799.1|interpro:IPR013170(mRNA splicing factor, Cwf21) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:7k7gB0BtD2p4Wll9zZJD7hup4sE3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O49553 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988853|ensemblplants:AT4G21110.1|ensemblplants:AT4G21110.2|uniprotkb:A0A178V4J0 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:o49553_arath(display_long)|uniprotkb:F7J7.50(orf name)|uniprotkb:F7J7_50(orf name)|uniprotkb:At4g21110(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT4G21110(gene)|ensemblplants:AT4G21110.1(transcript)|ensemblplants:AT4G21110.2(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005829"(cytosol)|refseq:NP_001329615.1|refseq:NP_193843.1|interpro:IPR018230|interpro:IPR001748(G10 protein) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:YgCLVuHCecHcDbfII75sTuJEIPY3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q8L5Y4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988831|ensemblplants:AT2G38770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q8l5y4_arath(display_long)|uniprotkb:EMB2765(gene name)|psi-mi:EMB2765(display_short)|uniprotkb:EMBRYO DEFECTIVE 2765(gene name synonym)|uniprotkb:T6A23.3(orf name)|uniprotkb:T6A23_3(orf name)|uniprotkb:At2g38770(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G38770(gene)|ensemblplants:AT2G38770.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_850297.1|interpro:IPR032174|interpro:IPR026300|interpro:IPR041679|interpro:IPR041677|interpro:IPR027417 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:APJyvG87YiNkzAHToEyUmtUyJac3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LK52 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516817|ensemblplants:AT3G13200.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9lk52_arath(display_long)|uniprotkb:EMB2769(gene name)|psi-mi:EMB2769(display_short)|uniprotkb:EMBRYO DEFECTIVE 2769(gene name synonym)|uniprotkb:At3g13200(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G13200(gene)|ensemblplants:AT3G13200.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045292"(mRNA cis splicing, via spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_566447.1|interpro:IPR006973(Cwf15/Cwc15 cell cycle control protein) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:owb4CePRbSbRHKSBkoqn+f4bhMI3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A384KQ28 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988818|ensemblplants:AT3G18790.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a384kq28_arath(display_long)|uniprotkb:AT9943_LOCUS11425(orf name)|uniprotkb:C24_LOCUS13125(orf name)|uniprotkb:At3g18790(locus name)|uniprotkb:AXX17_At3g19980(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G18790(gene)|ensemblplants:AT3G18790.1(transcript)|go:"GO:0000350"(generation of catalytic spliceosome for second transesterification step)|go:"GO:0005634"(nucleus)|refseq:NP_188509.1|interpro:IPR029012|interpro:IPR009360(Isy1-like splicing)|interpro:IPR037200 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:ANRAH3dGEZLFsDAXeng8uoPHcwk3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:F4JZX8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988802|ensemblplants:AT5G41770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:f4jzx8_arath(display_long)|uniprotkb:K16L22.5(orf name)|uniprotkb:K16L22_5(orf name)|uniprotkb:At5g41770(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G41770(gene)|ensemblplants:AT5G41770.1(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0009536"(plastid)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|refseq:NP_198992.2|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:jmOdYrlYeRpSjBSOWovQDqcFA+g3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9XIJ3 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988789|ensemblplants:AT1G10580.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9xij3_arath(display_long)|uniprotkb:At1g10580(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G10580(gene)|ensemblplants:AT1G10580.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR020472|interpro:IPR032847|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:1lijc/eH/oKwkZ00MbaXjTdG1yI3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SAG7 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988772|ensemblplants:AT1G80930.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9sag7_arath(display_long)|uniprotkb:F23A5.29(orf name)|uniprotkb:F23A5_29(orf name)|uniprotkb:At1g80930(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G80930(gene)|ensemblplants:AT1G80930.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006417"(regulation of translation)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_178208.1|interpro:IPR016024(Armadillo-type fold)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR003890(MIF4G-like, type 3) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:D7QvTapCxqcPlDMXPL2Wwqm+vto3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178ULT4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988762|ensemblplants:AT5G28740.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178ult4_arath(display_long)|uniprotkb:At5g28740(locus name)|uniprotkb:AXX17_At5g29180(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G28740(gene)|ensemblplants:AT5G28740.1(transcript)|go:"GO:0006396"(RNA processing)|refseq:NP_198226.1|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:ROzICR/JwVmoji0XO1VVB1TmqCQ3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:F4HZI8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516058|ensemblplants:AT1G15200.3 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:f4hzi8_arath(display_long)|uniprotkb:F9L1.14(orf name)|uniprotkb:F9L1_14(orf name)|uniprotkb:At1g15200(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G15200(gene)|ensemblplants:AT1G15200.3(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_001185000.1|interpro:IPR039853|interpro:IPR006786(Pinin/SDK/memA protein) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:BugaiL7OAoMm9uqYZNJ7gYmY4/43702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LU46 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988740|ensemblplants:AT5G51280.1|uniprotkb:Q0WWH1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:rh35_arath(display_long)|uniprotkb:RH35(gene name)|psi-mi:RH35(display_short)|uniprotkb:MWD22.23(orf name)|uniprotkb:At5g51280(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G51280(gene)|ensemblplants:AT5G51280.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0008270"(zinc ion binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|refseq:NP_199941.1|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR044113|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR027417|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR001878(Zinc finger, CCHC-type)|interpro:IPR036875 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:6UyprCeY0HpFAL8pJI7bVbQNPR83702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9FVQ1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387014|ensemblplants:AT1G48920.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:nucl1_arath(display_long)|uniprotkb:NUCL1(gene name)|psi-mi:NUCL1(display_short)|uniprotkb:PARL1(gene name synonym)|uniprotkb:Protein NUCLEOLIN LIKE 1(gene name synonym)|uniprotkb:Protein PARALLEL 1(gene name synonym)|uniprotkb:F27K7.6(orf name)|uniprotkb:At1g48920(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G48920(gene)|ensemblplants:AT1G48920.1(transcript)|go:"GO:0000478"(endonucleolytic cleavage involved in rRNA processing)|go:"GO:0001731"(formation of translation preinitiation complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0010305"(leaf vascular tissue pattern formation)|go:"GO:0010588"(cotyledon vascular tissue pattern formation)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034057"(RNA strand-exchange activity)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0080056"(petal vascular tissue pattern formation)|go:"GO:0080057"(sepal vascular tissue pattern formation)|go:"GO:0097010"(eukaryotic translation initiation factor 4F complex assembly)|refseq:NP_175322.1|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR034349|interpro:IPR034350|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:u9+cJna0mkHETsGAL7d/JUmfBXA3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94AH9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382666|uniprotkb:Q9SZZ1|ensemblplants:AT4G25630.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:fbrl2_arath(display_long)|uniprotkb:FIB2(gene name)|psi-mi:FIB2(display_short)|uniprotkb:FLP(gene name synonym)|uniprotkb:Fibrillarin-like protein 2(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym)|uniprotkb:MED36A(gene name synonym)|uniprotkb:MED36_1(gene name synonym)|uniprotkb:L73G19.10(orf name)|uniprotkb:At4g25630(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_567724.1|dip:DIP-39086N|ensemblplants:AT4G25630(gene)|ensemblplants:AT4G25630.1(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004540"(ribonuclease activity)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006952"(defense response)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0016592"(mediator complex)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR029063 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:v1PZJGtjwp7jP3jHT7K1lS7YxT43702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9FEF8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-9161138|uniprotkb:Q9FUZ8|uniprotkb:Q0WLG3|uniprotkb:Q9SP30|uniprotkb:B3H6E7|ensemblplants:AT5G52470.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:fbrl1_arath(display_long)|uniprotkb:FIB1(gene name)|psi-mi:FIB1(display_short)|uniprotkb:FBR1(gene name synonym)|uniprotkb:Fibrillarin-like protein 1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym)|uniprotkb:MED36B(gene name synonym)|uniprotkb:MED36_2(gene name synonym)|uniprotkb:SKIP7(gene name synonym)|uniprotkb:SKP1-interacting partner 7(gene name synonym)|uniprotkb:K24M7.22(orf name)|uniprotkb:At5g52470(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR000692(Fibrillarin)|refseq:NP_001119418.1|refseq:NP_568772.3|interpro:IPR029063|ensemblplants:AT5G52470(gene)|ensemblplants:AT5G52470.1(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0009536"(plastid)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:RhxSA+3K0Bqn1zvqH5wIBVErfwY3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LEY9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988719|ensemblplants:AT5G08180.1|ensemblplants:AT5G08180.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:nhp2_arath(display_long)|uniprotkb:Nhp2-like protein(gene name synonym)|uniprotkb:T22D6.120(orf name)|uniprotkb:At5g08180(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G08180(gene)|ensemblplants:AT5G08180.1(transcript)|ensemblplants:AT5G08180.2(transcript)|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0034513"(box H/ACA snoRNA binding)|refseq:NP_001190260.1|refseq:NP_196435.1|interpro:IPR002415(High mobility group-like nuclear protein)|interpro:IPR029064|interpro:IPR004038(Ribosomal protein L7Ae/L30e/S12e/Gadd45)|interpro:IPR018492 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:CMguH3E2VDwpykDst1yokOIjVw83702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:B5X0I6 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387017|uniprotkb:Q8S8H1|uniprotkb:Q8VYL2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:vip6_arath(display_long)|uniprotkb:ELF8(gene name synonym)|uniprotkb:VIP6(gene name)|psi-mi:VIP6(display_short)|uniprotkb:Protein EARLY FLOWERING 8(gene name synonym)|uniprotkb:Protein VERNALIZATION INDEPENDENCE 6(gene name synonym)|uniprotkb:At2g06210(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009908"(flower development)|go:"GO:0009910"(negative regulation of flower development)|go:"GO:0016571"(histone methylation)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|refseq:NP_178674.7 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:/6fNHK6uBvBUl8ZXhiUdI38Ym0w3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:P43333 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387311|ensemblplants:AT1G09760.1|uniprotkb:O04497 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:ru2a_arath(display_long)|uniprotkb:F21M12.14(orf name)|uniprotkb:At1g09760(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G09760(gene)|ensemblplants:AT1G09760.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0009409"(response to cold)|go:"GO:0015030"(Cajal body)|go:"GO:0030620"(U2 snRNA binding)|refseq:NP_172447.1|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:sKxTmQZrwctw+v0O55lpBoWrvBM3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LNC5 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2292267|ensemblplants:AT1G06220.1|ensemblplants:AT1G06220.2|ensemblplants:AT1G06220.3 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:clo_arath(display_long)|uniprotkb:CLO(gene name)|psi-mi:CLO(display_short)|uniprotkb:GFA1(gene name synonym)|uniprotkb:MEE5(gene name synonym)|uniprotkb:Protein CLOTHO(gene name synonym)|uniprotkb:Protein GAMETOPHYTE FACTOR 1(gene name synonym)|uniprotkb:Protein MATERNAL EFFECT EMBRYO ARREST 5(gene name synonym)|uniprotkb:Protein VAJRA-1(gene name synonym)|uniprotkb:SNU114 homolog(gene name synonym)|uniprotkb:VAJ-1(gene name synonym)|uniprotkb:F9P14.8(orf name)|uniprotkb:At1g06220(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR031950|refseq:NP_172112.1|refseq:NP_849600.1|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR020568|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR044121|refseq:NP_001321282.1|interpro:IPR027417|interpro:IPR035647|interpro:IPR035655|ensemblplants:AT1G06220(gene)|ensemblplants:AT1G06220.1(transcript)|ensemblplants:AT1G06220.2(transcript)|ensemblplants:AT1G06220.3(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0005886"(plasma membrane)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0016607"(nuclear speck)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0045694"(regulation of embryo sac egg cell differentiation)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048437"(floral organ development)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:1990904"(ribonucleoprotein complex) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:tSA+VSjQwcaP24HXjH3yD0pzmpc3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SYP1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1787068|uniprotkb:Q56Z02|uniprotkb:Q8W577|ensemblplants:AT1G20960.1|ensemblplants:AT1G20960.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:dexhc_arath(display_long)|uniprotkb:BRR2A(gene name)|psi-mi:BRR2A(display_short)|uniprotkb:BRR2 homolog A(gene name synonym)|uniprotkb:EMB1507(gene name synonym)|uniprotkb:Pre-mRNA-splicing helicase BRR2A(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1507(gene name synonym)|uniprotkb:F9H16.5(orf name)|uniprotkb:At1g20960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004179(Sec63)|refseq:NP_001185050.1|refseq:NP_173520.1|interpro:IPR036388|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR027417|interpro:IPR035892|interpro:IPR036390|interpro:IPR041094|ensemblplants:AT1G20960(gene)|ensemblplants:AT1G20960.1(transcript)|ensemblplants:AT1G20960.2(transcript)|go:"GO:0000388"("spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0140603"(obsolete ATP hydrolysis activity) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uHcCN21s+AzO0p8LWWv+97lPIBc3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SSD2 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2270869|ensemblplants:AT1G80070.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:prp8a_arath(display_long)|uniprotkb:PRP8A(gene name)|psi-mi:PRP8A(display_short)|uniprotkb:EMB14(gene name synonym)|uniprotkb:EMB177(gene name synonym)|uniprotkb:EMB33(gene name synonym)|uniprotkb:PRP8 homolog A(gene name synonym)|uniprotkb:Protein ABNORMAL SUSPENSOR 2(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 14(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 177(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 33(gene name synonym)|uniprotkb:Protein SUPPRESSOR OF OVEREXPRESSED FCA 81(gene name synonym)|uniprotkb:SOF81(gene name synonym)|uniprotkb:SUS2(gene name synonym)|uniprotkb:F18B13.15(orf name)|uniprotkb:At1g80070(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|refseq:NP_178124.2|interpro:IPR000555(Mov34/MPN/PAD-1)|interpro:IPR012591(PRO8NT)|interpro:IPR012984(PRO, C-terminal)|interpro:IPR012592(PROCN)|interpro:IPR021983|interpro:IPR019581|interpro:IPR019580|interpro:IPR019582|interpro:IPR027652|ensemblplants:AT1G80070(gene)|ensemblplants:AT1G80070.1(transcript)|go:"GO:0000244"(spliceosomal tri-snRNP complex assembly)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005739"(mitochondrion)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030619"(U1 snRNA binding)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0070122"(isopeptidase activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097157"(pre-mRNA intronic binding)|interpro:IPR037518|interpro:IPR042516|interpro:IPR043172|interpro:IPR043173 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:89MpmqrLzCWkjteDzuBdFvnf3Fw3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9S7E6 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988689|ensemblplants:AT1G76300.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:smd3a_arath(display_long)|uniprotkb:snRNP core protein D3-a(gene name synonym)|uniprotkb:F15M4.20(orf name)|uniprotkb:T23E18.23(orf name)|uniprotkb:At1g76300(locus name)|uniprotkb:SMD3A(gene name)|psi-mi:SMD3A(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G76300(gene)|ensemblplants:AT1G76300.1(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|refseq:NP_177757.1|interpro:IPR027141|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034099 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uD7P7bf3istjhGkpIRqGFRs7JNg3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SY09 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-4427140|uniprotkb:F4JHV8|ensemblplants:AT4G02840.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:smd1b_arath(display_long)|uniprotkb:SMD1B(gene name)|psi-mi:SMD1B(display_short)|uniprotkb:T5J8.16(orf name)|uniprotkb:At4g02840(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_001190664.1|refseq:NP_192193.1|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR027141|interpro:IPR034102|ensemblplants:AT4G02840(gene)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0035194"(post-transcriptional gene silencing by RNA)|ensemblplants:AT4G02840.1(transcript)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:jTngHuyDVZ8dnrm3RW+rJALCJxo3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LM92 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988658|ensemblplants:AT1G20580.1|uniprotkb:Q8LC48|uniprotkb:Q9LMW6 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:smd3b_arath(display_long)|uniprotkb:snRNP core protein D3-b(gene name synonym)|uniprotkb:F2D10.7(orf name)|uniprotkb:SMD3B(gene name)|psi-mi:SMD3B(display_short)|uniprotkb:F5M15.9(orf name)|uniprotkb:At1g20580(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G20580(gene)|ensemblplants:AT1G20580.1(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0048589"(developmental growth)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|refseq:NP_564119.1|interpro:IPR027141|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034099 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:x+h+7Pwxg7imPFhFBQKcHPhcqGA3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94EH8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988635|ensemblplants:AT1G66260.1|ensemblplants:AT1G66260.2|uniprotkb:Q9C7U4|uniprotkb:Q9LF77 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:tho4c_arath(display_long)|uniprotkb:ALY3(gene name)|psi-mi:ALY3(display_short)|uniprotkb:DIP1(gene name synonym)|uniprotkb:THO4C(gene name synonym)|uniprotkb:T6J19.1(orf name)|uniprotkb:At1g66260(locus name)|uniprotkb:ALYREF homolog 3(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G66260(gene)|ensemblplants:AT1G66260.1(transcript)|ensemblplants:AT1G66260.2(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0051028"(mRNA transport)|refseq:NP_001185329.1|refseq:NP_564871.1|interpro:IPR025715|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR000504(RNA recognition motif, RNP-1) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:UzHE863eFdsQw/yhocrFd08qBUk3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q6NQ72 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988615|ensemblplants:AT5G37720.1|uniprotkb:Q9FHP9|uniprotkb:Q9LF76 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:tho4d_arath(display_long)|uniprotkb:ALY4(gene name)|psi-mi:ALY4(display_short)|uniprotkb:DIP2(gene name synonym)|uniprotkb:THO4D(gene name synonym)|uniprotkb:K12B20.19(orf name)|uniprotkb:At5g37720(locus name)|uniprotkb:ALYREF homolog 4(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G37720(gene)|ensemblplants:AT5G37720.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006952"(defense response)|go:"GO:0051028"(mRNA transport)|refseq:NP_198588.2|interpro:IPR025715|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR000504(RNA recognition motif, RNP-1) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:+VDy5Bply7Er/Kc3Yhg9eXUknK83702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:F4I9J7 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988584|ensemblplants:AT1G51510.1|uniprotkb:Q8LG23|uniprotkb:Q94AZ6|uniprotkb:Q9C8K3 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:y14_arath(display_long)|uniprotkb:Y14(gene name)|psi-mi:Y14(display_short)|uniprotkb:RBM8(gene name synonym)|uniprotkb:RNA-binding protein 8A(gene name synonym)|uniprotkb:F5D21.5(orf name)|uniprotkb:At1g51510(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G51510(gene)|ensemblplants:AT1G51510.1(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0006417"(regulation of translation)|go:"GO:0008380"(RNA splicing)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0035145"(exon-exon junction complex)|go:"GO:0051028"(mRNA transport)|refseq:NP_564591.1|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR008111(RNA binding motif protein 8)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR033744 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:n7p7IgpFh7wI4nkXYAEG62XJqv03702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O23676 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-4443810|uniprotkb:A0A023T774|ensemblplants:AT1G02140.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:mgn_arath(display_long)|uniprotkb:MAGO(gene name)|psi-mi:MAGO(display_short)|uniprotkb:T7I23.7(orf name)|uniprotkb:At1g02140(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_171716.1|interpro:IPR004023(Mago nashi protein)|interpro:IPR036605|ensemblplants:AT1G02140(gene)|ensemblplants:AT1G02140.1(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006397"(mRNA processing)|go:"GO:0006417"(regulation of translation)|go:"GO:0008380"(RNA splicing)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010183"(pollen tube guidance)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0035145"(exon-exon junction complex)|go:"GO:0051028"(mRNA transport) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uAdh6Zrso2IZn67c1F3PY2BZPcQ3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94A52 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-6921807|ensemblplants:AT3G19760.1|uniprotkb:Q9ZS14 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:rh2_arath(display_long)|uniprotkb:EIF4A3(gene name)|psi-mi:EIF4A3(display_short)|uniprotkb:DEAD-box ATP-dependent RNA helicase 2(gene name synonym)|uniprotkb:RH2(gene name synonym)|uniprotkb:MMB12.25(orf name)|uniprotkb:MMB12.4(orf name)|uniprotkb:At3g19760(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G19760(gene)|ensemblplants:AT3G19760.1(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0001666"(response to hypoxia)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0006417"(regulation of translation)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0035145"(exon-exon junction complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|refseq:NP_188610.1|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR027417|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:+LC/Xf4nhcVCUlH2Rx7bxuisj/Y3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O80653 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430565|uniprotkb:F4I5L6|uniprotkb:Q67YK1|ensemblplants:AT1G77180.1|ensemblplants:AT1G77180.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:skip_arath(display_long)|uniprotkb:SKIP(gene name)|psi-mi:SKIP(display_short)|uniprotkb:EIP1(gene name synonym)|uniprotkb:Protein EARLY FLOWERING AND INSENSITIVE TO PHOTOPERIOD 1(gene name synonym)|uniprotkb:SNW domain-containing protein(gene name synonym)|uniprotkb:T14N5.5(orf name)|uniprotkb:At1g77180(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_001185416.1|refseq:NP_001031291.1|refseq:NP_565151.1|interpro:IPR017862|interpro:IPR004015(SKIP/SNW)|ensemblplants:AT1G77180(gene)|ensemblplants:AT1G77180.1(transcript)|ensemblplants:AT1G77180.2(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0008380"(RNA splicing)|go:"GO:0009651"(response to salt stress)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0010555"(response to mannitol)|go:"GO:0016607"(nuclear speck)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|go:"GO:1901002"(positive regulation of response to salt stress)|go:"GO:1902584"(positive regulation of response to water deprivation)|go:"GO:2000028"(regulation of photoperiodism, flowering) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:mJWhKHfQoAxVBOPHoAouCV1/fIQ3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LNV5 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430550|uniprotkb:Q93XZ5|ensemblplants:AT1G07360.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:c3h4_arath(display_long)|uniprotkb:F22G5.30(orf name)|uniprotkb:At1g07360(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_563788.1|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR032297|interpro:IPR035979|interpro:IPR036855|interpro:IPR039171|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|ensemblplants:AT1G07360(gene)|ensemblplants:AT1G07360.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0046872"(metal ion binding)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:eQGWfQusYq4H2A65OjIapsrYH2Q3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SIH1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2131488|uniprotkb:Q8LF78|ensemblplants:AT2G36130.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:cp18b_arath(display_long)|uniprotkb:CYP18-2(gene name)|psi-mi:CYP18-2(display_short)|uniprotkb:Cyclophilin of 18 kDa 2(gene name synonym)|uniprotkb:Cyclophilin-18-2(gene name synonym)|uniprotkb:F9C22.6(orf name)|uniprotkb:At2g36130(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR044666|interpro:IPR024936|refseq:NP_181157.1|interpro:IPR020892|interpro:IPR002130(Peptidyl-prolyl cis-trans isomerase, cyclophilin-type)|interpro:IPR029000|ensemblplants:AT2G36130(gene)|ensemblplants:AT2G36130.1(transcript)|go:"GO:0000413"(protein peptidyl-prolyl isomerization)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:qCf0Hk/NzloHwN0KHm+nrwOeGZ83702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q949S9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382943|uniprotkb:Q9LV24|ensemblplants:AT3G18165.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:spf27_arath(display_long)|uniprotkb:At3g18165(locus name)|uniprotkb:MOS4(gene name)|psi-mi:MOS4(display_short)|uniprotkb:BCAS2(gene name synonym)|uniprotkb:SPF27(gene name synonym)|uniprotkb:Modifier of SNC1 member 4(gene name synonym)|uniprotkb:Protein BCAS2 homolog(gene name synonym)|uniprotkb:MRC8.16(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_566599.1|interpro:IPR008409(Breast carcinoma amplified sequence 2)|ensemblplants:AT3G18165(gene)|ensemblplants:AT3G18165.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0045087"(innate immune response) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:lf/kqm05GXV1+JI6tpe/hGWDaUk3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:P92948 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382948|intact:EBI-2430472|uniprotkb:B9DFT0|uniprotkb:O04498|uniprotkb:Q6R0C5|ensemblplants:AT1G09770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:cdc5l_arath(display_long)|uniprotkb:CDC5(gene name)|psi-mi:CDC5(display_short)|uniprotkb:MAC1(gene name synonym)|uniprotkb:MYBCD5(gene name synonym)|uniprotkb:Atypical R2R3-MYB transcription factor CDC5(gene name synonym)|uniprotkb:Protein MYB DOMAIN CELL DIVISION CYCLE 5(gene name synonym)|uniprotkb:MOS4-associated complex protein 1(gene name synonym)|uniprotkb:F21M12.15(orf name)|uniprotkb:At1g09770(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_172448.1|interpro:IPR021786|interpro:IPR009057(Homeodomain-like)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR017930|ensemblplants:AT1G09770(gene)|ensemblplants:AT1G09770.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0050832"(defense response to fungus) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:jbgmi/J4gKzeIVghE4O5N/F8NkM3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94BR4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430485|uniprotkb:P93809|uniprotkb:Q56Y87|ensemblplants:AT1G04510.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:pr19a_arath(display_long)|uniprotkb:At1g04510(locus name)|uniprotkb:MAC3A(gene name synonym)|uniprotkb:U-box domain-containing protein 59(gene name synonym)|uniprotkb:Plant U-box protein 59(gene name synonym)|uniprotkb:F19P19.2(orf name)|uniprotkb:PRP19A(gene name)|psi-mi:PRP19A(display_short)|uniprotkb:PUB59(gene name synonym)|uniprotkb:MOS4-associated complex protein 3A(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_563708.1|interpro:IPR013915(Pre-mRNA-splicing factor 19)|interpro:IPR003613(U box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR038959|interpro:IPR036322|ensemblplants:AT1G04510(gene)|ensemblplants:AT1G04510.1(transcript)|go:"GO:0000349"(generation of catalytic spliceosome for first transesterification step)|go:"GO:0000974"(Prp19 complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006281"(DNA repair)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:5dYA8/1YElaRoSYieTMKuZwGWMQ3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O22785 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430519|uniprotkb:C1KE07|uniprotkb:Q3EBP5|ensemblplants:AT2G33340.1|ensemblplants:AT2G33340.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:pr19b_arath(display_long)|uniprotkb:PRP19B(gene name)|psi-mi:PRP19B(display_short)|uniprotkb:MAC3B(gene name synonym)|uniprotkb:U-box domain-containing protein 60(gene name synonym)|uniprotkb:Plant U-box protein 60(gene name synonym)|uniprotkb:F4P9.11(orf name)|uniprotkb:At2g33340(locus name)|uniprotkb:PUB60(gene name synonym)|uniprotkb:MOS4-associated complex protein 3B(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase PRP19 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_850206.4|refseq:NP_850207.4|interpro:IPR013915(Pre-mRNA-splicing factor 19)|interpro:IPR003613(U box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR038959|interpro:IPR036322|ensemblplants:AT2G33340(gene)|ensemblplants:AT2G33340.1(transcript)|ensemblplants:AT2G33340.2(transcript)|go:"GO:0000349"(generation of catalytic spliceosome for first transesterification step)|go:"GO:0000974"(Prp19 complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006281"(DNA repair)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:gOMHnYP2aI2kTjTkjcgWhPh+OJw3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q42384 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382964|ensemblplants:AT4G15900.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:prl1_arath(display_long)|uniprotkb:PRL1(gene name)|psi-mi:PRL1(display_short)|uniprotkb:At4g15900(locus name)|uniprotkb:dl3990w(orf name)|uniprotkb:MAC2(gene name synonym)|uniprotkb:MOS4-associated complex protein 2(gene name synonym)|uniprotkb:FCAALL.40(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_193325.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G15900(gene)|ensemblplants:AT4G15900.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0009749"(response to glucose)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048825"(cotyledon development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:DHIuqlSZSCA6gIlKWKGheBqJCxA3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SEE9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1792008|uniprotkb:F4I4H8|uniprotkb:Q5E925|uniprotkb:Q94AS1|ensemblplants:AT1G16610.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:sr45_arath(display_long)|uniprotkb:SR45(gene name)|psi-mi:SR45(display_short)|uniprotkb:RNPS1(gene name synonym)|uniprotkb:Serine/arginine-rich ribonucleoprotein 1(gene name synonym)|uniprotkb:F19K19.9(orf name)|uniprotkb:At1g16610(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_173107.1|interpro:IPR000504(RNA recognition motif, RNP-1)|refseq:NP_001185014.1|refseq:NP_973844.1|interpro:IPR034201|interpro:IPR035979|mint:Q9SEE9|ensemblplants:AT1G16610(gene)|ensemblplants:AT1G16610.1(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008380"(RNA splicing)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016607"(nuclear speck)|go:"GO:0061574"(ASAP complex) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:lmj1EdP2QteW4/4G6Hqyn5ziwok3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O64644 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-965964|ensemblplants:AT2G45640.1|uniprotkb:Q0WTU2|uniprotkb:Q8L8K8 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:sap18_arath(display_long)|uniprotkb:At2g45640(locus name)|uniprotkb:F17K2.17(orf name)|uniprotkb:18 kDa Sin3-associated polypeptide(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G45640(gene)|ensemblplants:AT2G45640.1(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0009651"(response to salt stress)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|refseq:NP_566050.1|interpro:IPR017250(Histone deacetylase complex, SAP18 subunit)|interpro:IPR010516(Sin3 associated polypeptide p18)|interpro:IPR042534 - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:3ytzuMeRbCrxQDkzywUSvM/XmCM3702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O22826 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430671|ensemblplants:AT2G43770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:o22826_arath(display_long)|uniprotkb:F18O19.12(orf name)|uniprotkb:At2g43770(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988435|imex:IM-28999-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_181905.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR024977|interpro:IPR036322|ensemblplants:AT2G43770(gene)|ensemblplants:AT2G43770.1(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Supplementary Data 3|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:RKf5D+EC84rZA2yHtMedhNjN1R43702 rigid:geBQuKjLHIIhZaEU99czuzQ1iLQ false green fluorescent protein tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178WKP3 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516605|ensemblplants:AT1G13690.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178wkp3_arath(display_long)|uniprotkb:AN1_LOCUS1484(orf name)|uniprotkb:C24_LOCUS1400(orf name)|uniprotkb:AXX17_At1g14230(locus name)|uniprotkb:AT9943_LOCUS1168(orf name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G13690(gene)|ensemblplants:AT1G13690.1(transcript)|go:"GO:0003723"(RNA binding)|refseq:NP_563931.2|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034168|interpro:IPR035979|interpro:IPR000504(RNA recognition motif, RNP-1) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:boIWi5p2SCg0RogVeBpMejNUCkU3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178VUX9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988873|ensemblplants:AT2G43770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178vux9_arath(display_long)|uniprotkb:AN1_LOCUS10889(orf name)|uniprotkb:AT9943_LOCUS9357(orf name)|uniprotkb:AXX17_At2g41290(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G43770(gene)|ensemblplants:AT2G43770.1(transcript)|refseq:NP_181905.1|interpro:IPR024977|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:RKf5D+EC84rZA2yHtMedhNjN1R43702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9ZV45 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2133109|ensemblplants:AT2G18740.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9zv45_arath(display_long)|uniprotkb:At2g18740(locus name)|uniprotkb:Sm protein E(gene name synonym)|uniprotkb:MSF3.12(gene name)|psi-mi:MSF3.12(display_short)|uniprotkb:MSF3_12(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_179464.1|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR027078|ensemblplants:AT2G18740(gene)|ensemblplants:AT2G18740.1(transcript)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005829"(cytosol)|go:"GO:0008380"(RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048509"(regulation of meristem development)|go:"GO:0071011"(precatalytic spliceosome) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:ujBWxfvEvNZ68Q1mWweNjZSVuw03702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O49553 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988853|ensemblplants:AT4G21110.1|ensemblplants:AT4G21110.2|uniprotkb:A0A178V4J0 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:o49553_arath(display_long)|uniprotkb:F7J7.50(orf name)|uniprotkb:F7J7_50(orf name)|uniprotkb:At4g21110(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT4G21110(gene)|ensemblplants:AT4G21110.1(transcript)|ensemblplants:AT4G21110.2(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005829"(cytosol)|refseq:NP_001329615.1|refseq:NP_193843.1|interpro:IPR018230|interpro:IPR001748(G10 protein) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:YgCLVuHCecHcDbfII75sTuJEIPY3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q8L5Y4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988831|ensemblplants:AT2G38770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q8l5y4_arath(display_long)|uniprotkb:EMB2765(gene name)|psi-mi:EMB2765(display_short)|uniprotkb:EMBRYO DEFECTIVE 2765(gene name synonym)|uniprotkb:T6A23.3(orf name)|uniprotkb:T6A23_3(orf name)|uniprotkb:At2g38770(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G38770(gene)|ensemblplants:AT2G38770.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_850297.1|interpro:IPR032174|interpro:IPR026300|interpro:IPR041679|interpro:IPR041677|interpro:IPR027417 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:APJyvG87YiNkzAHToEyUmtUyJac3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LK52 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516817|ensemblplants:AT3G13200.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9lk52_arath(display_long)|uniprotkb:EMB2769(gene name)|psi-mi:EMB2769(display_short)|uniprotkb:EMBRYO DEFECTIVE 2769(gene name synonym)|uniprotkb:At3g13200(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G13200(gene)|ensemblplants:AT3G13200.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045292"(mRNA cis splicing, via spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_566447.1|interpro:IPR006973(Cwf15/Cwc15 cell cycle control protein) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:owb4CePRbSbRHKSBkoqn+f4bhMI3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:F4JZX8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988802|ensemblplants:AT5G41770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:f4jzx8_arath(display_long)|uniprotkb:K16L22.5(orf name)|uniprotkb:K16L22_5(orf name)|uniprotkb:At5g41770(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G41770(gene)|ensemblplants:AT5G41770.1(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0009536"(plastid)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:0071014"(post-mRNA release spliceosomal complex)|refseq:NP_198992.2|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:jmOdYrlYeRpSjBSOWovQDqcFA+g3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9XIJ3 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988789|ensemblplants:AT1G10580.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9xij3_arath(display_long)|uniprotkb:At1g10580(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G10580(gene)|ensemblplants:AT1G10580.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR020472|interpro:IPR032847|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:1lijc/eH/oKwkZ00MbaXjTdG1yI3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SAG7 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988772|ensemblplants:AT1G80930.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:q9sag7_arath(display_long)|uniprotkb:F23A5.29(orf name)|uniprotkb:F23A5_29(orf name)|uniprotkb:At1g80930(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G80930(gene)|ensemblplants:AT1G80930.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006417"(regulation of translation)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_178208.1|interpro:IPR016024(Armadillo-type fold)|interpro:IPR003891(Initiation factor eIF-4 gamma, MA3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR003890(MIF4G-like, type 3) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:D7QvTapCxqcPlDMXPL2Wwqm+vto3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:A0A178ULT4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988762|ensemblplants:AT5G28740.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:a0a178ult4_arath(display_long)|uniprotkb:At5g28740(locus name)|uniprotkb:AXX17_At5g29180(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G28740(gene)|ensemblplants:AT5G28740.1(transcript)|go:"GO:0006396"(RNA processing)|refseq:NP_198226.1|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:ROzICR/JwVmoji0XO1VVB1TmqCQ3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:F4HZI8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-25516058|ensemblplants:AT1G15200.3 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:f4hzi8_arath(display_long)|uniprotkb:F9L1.14(orf name)|uniprotkb:F9L1_14(orf name)|uniprotkb:At1g15200(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G15200(gene)|ensemblplants:AT1G15200.3(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0071013"(catalytic step 2 spliceosome)|refseq:NP_001185000.1|interpro:IPR039853|interpro:IPR006786(Pinin/SDK/memA protein) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:BugaiL7OAoMm9uqYZNJ7gYmY4/43702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LU46 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988740|ensemblplants:AT5G51280.1|uniprotkb:Q0WWH1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:rh35_arath(display_long)|uniprotkb:RH35(gene name)|psi-mi:RH35(display_short)|uniprotkb:MWD22.23(orf name)|uniprotkb:At5g51280(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT5G51280(gene)|ensemblplants:AT5G51280.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0008270"(zinc ion binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|refseq:NP_199941.1|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR044113|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR027417|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR001878(Zinc finger, CCHC-type)|interpro:IPR036875 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:6UyprCeY0HpFAL8pJI7bVbQNPR83702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9FVQ1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387014|ensemblplants:AT1G48920.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:nucl1_arath(display_long)|uniprotkb:NUCL1(gene name)|psi-mi:NUCL1(display_short)|uniprotkb:PARL1(gene name synonym)|uniprotkb:Protein NUCLEOLIN LIKE 1(gene name synonym)|uniprotkb:Protein PARALLEL 1(gene name synonym)|uniprotkb:F27K7.6(orf name)|uniprotkb:At1g48920(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G48920(gene)|ensemblplants:AT1G48920.1(transcript)|go:"GO:0000478"(endonucleolytic cleavage involved in rRNA processing)|go:"GO:0001731"(formation of translation preinitiation complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0010305"(leaf vascular tissue pattern formation)|go:"GO:0010588"(cotyledon vascular tissue pattern formation)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034057"(RNA strand-exchange activity)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0080056"(petal vascular tissue pattern formation)|go:"GO:0080057"(sepal vascular tissue pattern formation)|go:"GO:0097010"(eukaryotic translation initiation factor 4F complex assembly)|refseq:NP_175322.1|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR034349|interpro:IPR034350|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:u9+cJna0mkHETsGAL7d/JUmfBXA3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94AH9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382666|uniprotkb:Q9SZZ1|ensemblplants:AT4G25630.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:fbrl2_arath(display_long)|uniprotkb:FIB2(gene name)|psi-mi:FIB2(display_short)|uniprotkb:FLP(gene name synonym)|uniprotkb:Fibrillarin-like protein 2(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym)|uniprotkb:MED36A(gene name synonym)|uniprotkb:MED36_1(gene name synonym)|uniprotkb:L73G19.10(orf name)|uniprotkb:At4g25630(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_567724.1|dip:DIP-39086N|ensemblplants:AT4G25630(gene)|ensemblplants:AT4G25630.1(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0004540"(ribonuclease activity)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006952"(defense response)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0016592"(mediator complex)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR029063 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:v1PZJGtjwp7jP3jHT7K1lS7YxT43702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9FEF8 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-9161138|uniprotkb:Q9FUZ8|uniprotkb:Q0WLG3|uniprotkb:Q9SP30|uniprotkb:B3H6E7|ensemblplants:AT5G52470.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:fbrl1_arath(display_long)|uniprotkb:FIB1(gene name)|psi-mi:FIB1(display_short)|uniprotkb:FBR1(gene name synonym)|uniprotkb:Fibrillarin-like protein 1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym)|uniprotkb:MED36B(gene name synonym)|uniprotkb:MED36_2(gene name synonym)|uniprotkb:SKIP7(gene name synonym)|uniprotkb:SKP1-interacting partner 7(gene name synonym)|uniprotkb:K24M7.22(orf name)|uniprotkb:At5g52470(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR000692(Fibrillarin)|refseq:NP_001119418.1|refseq:NP_568772.3|interpro:IPR029063|ensemblplants:AT5G52470(gene)|ensemblplants:AT5G52470.1(transcript)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0009536"(plastid)|go:"GO:0030515"(snoRNA binding)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:RhxSA+3K0Bqn1zvqH5wIBVErfwY3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:B5X0I6 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387017|uniprotkb:Q8S8H1|uniprotkb:Q8VYL2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:vip6_arath(display_long)|uniprotkb:ELF8(gene name synonym)|uniprotkb:VIP6(gene name)|psi-mi:VIP6(display_short)|uniprotkb:Protein EARLY FLOWERING 8(gene name synonym)|uniprotkb:Protein VERNALIZATION INDEPENDENCE 6(gene name synonym)|uniprotkb:At2g06210(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009908"(flower development)|go:"GO:0009910"(negative regulation of flower development)|go:"GO:0016571"(histone methylation)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR031101|refseq:NP_178674.7 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:/6fNHK6uBvBUl8ZXhiUdI38Ym0w3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:P43333 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-3387311|ensemblplants:AT1G09760.1|uniprotkb:O04497 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:ru2a_arath(display_long)|uniprotkb:F21M12.14(orf name)|uniprotkb:At1g09760(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G09760(gene)|ensemblplants:AT1G09760.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0009409"(response to cold)|go:"GO:0015030"(Cajal body)|go:"GO:0030620"(U2 snRNA binding)|refseq:NP_172447.1|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR044640 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:sKxTmQZrwctw+v0O55lpBoWrvBM3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LNC5 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2292267|ensemblplants:AT1G06220.1|ensemblplants:AT1G06220.2|ensemblplants:AT1G06220.3 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:clo_arath(display_long)|uniprotkb:CLO(gene name)|psi-mi:CLO(display_short)|uniprotkb:GFA1(gene name synonym)|uniprotkb:MEE5(gene name synonym)|uniprotkb:Protein CLOTHO(gene name synonym)|uniprotkb:Protein GAMETOPHYTE FACTOR 1(gene name synonym)|uniprotkb:Protein MATERNAL EFFECT EMBRYO ARREST 5(gene name synonym)|uniprotkb:Protein VAJRA-1(gene name synonym)|uniprotkb:SNU114 homolog(gene name synonym)|uniprotkb:VAJ-1(gene name synonym)|uniprotkb:F9P14.8(orf name)|uniprotkb:At1g06220(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR031950|refseq:NP_172112.1|refseq:NP_849600.1|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR020568|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR005517(Translation elongation factor EFG/EF2, domain IV)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR044121|refseq:NP_001321282.1|interpro:IPR027417|interpro:IPR035647|interpro:IPR035655|ensemblplants:AT1G06220(gene)|ensemblplants:AT1G06220.1(transcript)|ensemblplants:AT1G06220.2(transcript)|ensemblplants:AT1G06220.3(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0005886"(plasma membrane)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0016607"(nuclear speck)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0045694"(regulation of embryo sac egg cell differentiation)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0048437"(floral organ development)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome)|go:"GO:1990904"(ribonucleoprotein complex) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:tSA+VSjQwcaP24HXjH3yD0pzmpc3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SYP1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1787068|uniprotkb:Q56Z02|uniprotkb:Q8W577|ensemblplants:AT1G20960.1|ensemblplants:AT1G20960.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:dexhc_arath(display_long)|uniprotkb:BRR2A(gene name)|psi-mi:BRR2A(display_short)|uniprotkb:BRR2 homolog A(gene name synonym)|uniprotkb:EMB1507(gene name synonym)|uniprotkb:Pre-mRNA-splicing helicase BRR2A(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1507(gene name synonym)|uniprotkb:F9H16.5(orf name)|uniprotkb:At1g20960(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004179(Sec63)|refseq:NP_001185050.1|refseq:NP_173520.1|interpro:IPR036388|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR027417|interpro:IPR035892|interpro:IPR036390|interpro:IPR041094|ensemblplants:AT1G20960(gene)|ensemblplants:AT1G20960.1(transcript)|ensemblplants:AT1G20960.2(transcript)|go:"GO:0000388"("spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0140603"(obsolete ATP hydrolysis activity) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uHcCN21s+AzO0p8LWWv+97lPIBc3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SSD2 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2270869|ensemblplants:AT1G80070.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:prp8a_arath(display_long)|uniprotkb:PRP8A(gene name)|psi-mi:PRP8A(display_short)|uniprotkb:EMB14(gene name synonym)|uniprotkb:EMB177(gene name synonym)|uniprotkb:EMB33(gene name synonym)|uniprotkb:PRP8 homolog A(gene name synonym)|uniprotkb:Protein ABNORMAL SUSPENSOR 2(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 14(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 177(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 33(gene name synonym)|uniprotkb:Protein SUPPRESSOR OF OVEREXPRESSED FCA 81(gene name synonym)|uniprotkb:SOF81(gene name synonym)|uniprotkb:SUS2(gene name synonym)|uniprotkb:F18B13.15(orf name)|uniprotkb:At1g80070(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|refseq:NP_178124.2|interpro:IPR000555(Mov34/MPN/PAD-1)|interpro:IPR012591(PRO8NT)|interpro:IPR012984(PRO, C-terminal)|interpro:IPR012592(PROCN)|interpro:IPR021983|interpro:IPR019581|interpro:IPR019580|interpro:IPR019582|interpro:IPR027652|ensemblplants:AT1G80070(gene)|ensemblplants:AT1G80070.1(transcript)|go:"GO:0000244"(spliceosomal tri-snRNP complex assembly)|go:"GO:0000380"(alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005739"(mitochondrion)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030619"(U1 snRNA binding)|go:"GO:0030620"(U2 snRNA binding)|go:"GO:0030623"(U5 snRNA binding)|go:"GO:0070122"(isopeptidase activity)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097157"(pre-mRNA intronic binding)|interpro:IPR037518|interpro:IPR042516|interpro:IPR043172|interpro:IPR043173 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:89MpmqrLzCWkjteDzuBdFvnf3Fw3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9S7E6 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988689|ensemblplants:AT1G76300.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:smd3a_arath(display_long)|uniprotkb:snRNP core protein D3-a(gene name synonym)|uniprotkb:F15M4.20(orf name)|uniprotkb:T23E18.23(orf name)|uniprotkb:At1g76300(locus name)|uniprotkb:SMD3A(gene name)|psi-mi:SMD3A(display_short) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G76300(gene)|ensemblplants:AT1G76300.1(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|refseq:NP_177757.1|interpro:IPR027141|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034099 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uD7P7bf3istjhGkpIRqGFRs7JNg3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LM92 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-26988658|ensemblplants:AT1G20580.1|uniprotkb:Q8LC48|uniprotkb:Q9LMW6 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:smd3b_arath(display_long)|uniprotkb:snRNP core protein D3-b(gene name synonym)|uniprotkb:F2D10.7(orf name)|uniprotkb:SMD3B(gene name)|psi-mi:SMD3B(display_short)|uniprotkb:F5M15.9(orf name)|uniprotkb:At1g20580(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT1G20580(gene)|ensemblplants:AT1G20580.1(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005682"(U5 snRNP)|go:"GO:0005685"(U1 snRNP)|go:"GO:0005686"(U2 snRNP)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0034715"(pICln-Sm protein complex)|go:"GO:0034719"(SMN-Sm protein complex)|go:"GO:0048589"(developmental growth)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|refseq:NP_564119.1|interpro:IPR027141|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034099 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:x+h+7Pwxg7imPFhFBQKcHPhcqGA3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O23676 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-4443810|uniprotkb:A0A023T774|ensemblplants:AT1G02140.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:mgn_arath(display_long)|uniprotkb:MAGO(gene name)|psi-mi:MAGO(display_short)|uniprotkb:T7I23.7(orf name)|uniprotkb:At1g02140(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_171716.1|interpro:IPR004023(Mago nashi protein)|interpro:IPR036605|ensemblplants:AT1G02140(gene)|ensemblplants:AT1G02140.1(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006397"(mRNA processing)|go:"GO:0006417"(regulation of translation)|go:"GO:0008380"(RNA splicing)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010183"(pollen tube guidance)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0035145"(exon-exon junction complex)|go:"GO:0051028"(mRNA transport) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:uAdh6Zrso2IZn67c1F3PY2BZPcQ3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94A52 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-6921807|ensemblplants:AT3G19760.1|uniprotkb:Q9ZS14 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:rh2_arath(display_long)|uniprotkb:EIF4A3(gene name)|psi-mi:EIF4A3(display_short)|uniprotkb:DEAD-box ATP-dependent RNA helicase 2(gene name synonym)|uniprotkb:RH2(gene name synonym)|uniprotkb:MMB12.25(orf name)|uniprotkb:MMB12.4(orf name)|uniprotkb:At3g19760(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT3G19760(gene)|ensemblplants:AT3G19760.1(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0001666"(response to hypoxia)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0006417"(regulation of translation)|go:"GO:0008380"(RNA splicing)|go:"GO:0016607"(nuclear speck)|go:"GO:0035145"(exon-exon junction complex)|go:"GO:0051028"(mRNA transport)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|refseq:NP_188610.1|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR027417|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:+LC/Xf4nhcVCUlH2Rx7bxuisj/Y3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O80653 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430565|uniprotkb:F4I5L6|uniprotkb:Q67YK1|ensemblplants:AT1G77180.1|ensemblplants:AT1G77180.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:skip_arath(display_long)|uniprotkb:SKIP(gene name)|psi-mi:SKIP(display_short)|uniprotkb:EIP1(gene name synonym)|uniprotkb:Protein EARLY FLOWERING AND INSENSITIVE TO PHOTOPERIOD 1(gene name synonym)|uniprotkb:SNW domain-containing protein(gene name synonym)|uniprotkb:T14N5.5(orf name)|uniprotkb:At1g77180(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_001185416.1|refseq:NP_001031291.1|refseq:NP_565151.1|interpro:IPR017862|interpro:IPR004015(SKIP/SNW)|ensemblplants:AT1G77180(gene)|ensemblplants:AT1G77180.1(transcript)|ensemblplants:AT1G77180.2(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0008380"(RNA splicing)|go:"GO:0009651"(response to salt stress)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0010228"(vegetative to reproductive phase transition of meristem)|go:"GO:0010555"(response to mannitol)|go:"GO:0016607"(nuclear speck)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0048511"(rhythmic process)|go:"GO:1901002"(positive regulation of response to salt stress)|go:"GO:1902584"(positive regulation of response to water deprivation)|go:"GO:2000028"(regulation of photoperiodism, flowering) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:mJWhKHfQoAxVBOPHoAouCV1/fIQ3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9LNV5 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430550|uniprotkb:Q93XZ5|ensemblplants:AT1G07360.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:c3h4_arath(display_long)|uniprotkb:F22G5.30(orf name)|uniprotkb:At1g07360(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_563788.1|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR032297|interpro:IPR035979|interpro:IPR036855|interpro:IPR039171|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|ensemblplants:AT1G07360(gene)|ensemblplants:AT1G07360.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0046872"(metal ion binding)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071007"(U2-type catalytic step 2 spliceosome) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:eQGWfQusYq4H2A65OjIapsrYH2Q3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SIH1 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2131488|uniprotkb:Q8LF78|ensemblplants:AT2G36130.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:cp18b_arath(display_long)|uniprotkb:CYP18-2(gene name)|psi-mi:CYP18-2(display_short)|uniprotkb:Cyclophilin of 18 kDa 2(gene name synonym)|uniprotkb:Cyclophilin-18-2(gene name synonym)|uniprotkb:F9C22.6(orf name)|uniprotkb:At2g36130(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) interpro:IPR044666|interpro:IPR024936|refseq:NP_181157.1|interpro:IPR020892|interpro:IPR002130(Peptidyl-prolyl cis-trans isomerase, cyclophilin-type)|interpro:IPR029000|ensemblplants:AT2G36130(gene)|ensemblplants:AT2G36130.1(transcript)|go:"GO:0000413"(protein peptidyl-prolyl isomerization)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006457"(protein folding) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:qCf0Hk/NzloHwN0KHm+nrwOeGZ83702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q949S9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382943|uniprotkb:Q9LV24|ensemblplants:AT3G18165.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:spf27_arath(display_long)|uniprotkb:At3g18165(locus name)|uniprotkb:MOS4(gene name)|psi-mi:MOS4(display_short)|uniprotkb:BCAS2(gene name synonym)|uniprotkb:SPF27(gene name synonym)|uniprotkb:Modifier of SNC1 member 4(gene name synonym)|uniprotkb:Protein BCAS2 homolog(gene name synonym)|uniprotkb:MRC8.16(orf name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_566599.1|interpro:IPR008409(Breast carcinoma amplified sequence 2)|ensemblplants:AT3G18165(gene)|ensemblplants:AT3G18165.1(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0045087"(innate immune response) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:lf/kqm05GXV1+JI6tpe/hGWDaUk3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:P92948 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382948|intact:EBI-2430472|uniprotkb:B9DFT0|uniprotkb:O04498|uniprotkb:Q6R0C5|ensemblplants:AT1G09770.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:cdc5l_arath(display_long)|uniprotkb:CDC5(gene name)|psi-mi:CDC5(display_short)|uniprotkb:MAC1(gene name synonym)|uniprotkb:MYBCD5(gene name synonym)|uniprotkb:Atypical R2R3-MYB transcription factor CDC5(gene name synonym)|uniprotkb:Protein MYB DOMAIN CELL DIVISION CYCLE 5(gene name synonym)|uniprotkb:MOS4-associated complex protein 1(gene name synonym)|uniprotkb:F21M12.15(orf name)|uniprotkb:At1g09770(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_172448.1|interpro:IPR021786|interpro:IPR009057(Homeodomain-like)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR017930|ensemblplants:AT1G09770(gene)|ensemblplants:AT1G09770.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0050832"(defense response to fungus) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:jbgmi/J4gKzeIVghE4O5N/F8NkM3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q94BR4 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430485|uniprotkb:P93809|uniprotkb:Q56Y87|ensemblplants:AT1G04510.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:pr19a_arath(display_long)|uniprotkb:At1g04510(locus name)|uniprotkb:MAC3A(gene name synonym)|uniprotkb:U-box domain-containing protein 59(gene name synonym)|uniprotkb:Plant U-box protein 59(gene name synonym)|uniprotkb:F19P19.2(orf name)|uniprotkb:PRP19A(gene name)|psi-mi:PRP19A(display_short)|uniprotkb:PUB59(gene name synonym)|uniprotkb:MOS4-associated complex protein 3A(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_563708.1|interpro:IPR013915(Pre-mRNA-splicing factor 19)|interpro:IPR003613(U box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR038959|interpro:IPR036322|ensemblplants:AT1G04510(gene)|ensemblplants:AT1G04510.1(transcript)|go:"GO:0000349"(generation of catalytic spliceosome for first transesterification step)|go:"GO:0000974"(Prp19 complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006281"(DNA repair)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:5dYA8/1YElaRoSYieTMKuZwGWMQ3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O22785 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-2430519|uniprotkb:C1KE07|uniprotkb:Q3EBP5|ensemblplants:AT2G33340.1|ensemblplants:AT2G33340.2 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:pr19b_arath(display_long)|uniprotkb:PRP19B(gene name)|psi-mi:PRP19B(display_short)|uniprotkb:MAC3B(gene name synonym)|uniprotkb:U-box domain-containing protein 60(gene name synonym)|uniprotkb:Plant U-box protein 60(gene name synonym)|uniprotkb:F4P9.11(orf name)|uniprotkb:At2g33340(locus name)|uniprotkb:PUB60(gene name synonym)|uniprotkb:MOS4-associated complex protein 3B(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase PRP19 2(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_850206.4|refseq:NP_850207.4|interpro:IPR013915(Pre-mRNA-splicing factor 19)|interpro:IPR003613(U box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR038959|interpro:IPR036322|ensemblplants:AT2G33340(gene)|ensemblplants:AT2G33340.1(transcript)|ensemblplants:AT2G33340.2(transcript)|go:"GO:0000349"(generation of catalytic spliceosome for first transesterification step)|go:"GO:0000974"(Prp19 complex)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006281"(DNA repair)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:gOMHnYP2aI2kTjTkjcgWhPh+OJw3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q42384 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1382964|ensemblplants:AT4G15900.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:prl1_arath(display_long)|uniprotkb:PRL1(gene name)|psi-mi:PRL1(display_short)|uniprotkb:At4g15900(locus name)|uniprotkb:dl3990w(orf name)|uniprotkb:MAC2(gene name synonym)|uniprotkb:MOS4-associated complex protein 2(gene name synonym)|uniprotkb:FCAALL.40(orf name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_193325.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G15900(gene)|ensemblplants:AT4G15900.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0009749"(response to glucose)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048825"(cotyledon development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:DHIuqlSZSCA6gIlKWKGheBqJCxA3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:Q9SEE9 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-1792008|uniprotkb:F4I4H8|uniprotkb:Q5E925|uniprotkb:Q94AS1|ensemblplants:AT1G16610.1 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:sr45_arath(display_long)|uniprotkb:SR45(gene name)|psi-mi:SR45(display_short)|uniprotkb:RNPS1(gene name synonym)|uniprotkb:Serine/arginine-rich ribonucleoprotein 1(gene name synonym)|uniprotkb:F19K19.9(orf name)|uniprotkb:At1g16610(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) refseq:NP_173107.1|interpro:IPR000504(RNA recognition motif, RNP-1)|refseq:NP_001185014.1|refseq:NP_973844.1|interpro:IPR034201|interpro:IPR035979|mint:Q9SEE9|ensemblplants:AT1G16610(gene)|ensemblplants:AT1G16610.1(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008380"(RNA splicing)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016607"(nuclear speck)|go:"GO:0061574"(ASAP complex) - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:lmj1EdP2QteW4/4G6Hqyn5ziwok3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:O65655 uniprotkb:O64644 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 intact:EBI-965964|ensemblplants:AT2G45640.1|uniprotkb:Q0WTU2|uniprotkb:Q8L8K8 psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:sap18_arath(display_long)|uniprotkb:At2g45640(locus name)|uniprotkb:F17K2.17(orf name)|uniprotkb:18 kDa Sin3-associated polypeptide(gene name synonym) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-26988965|imex:IM-28999-6 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) ensemblplants:AT2G45640(gene)|ensemblplants:AT2G45640.1(transcript)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0009651"(response to salt stress)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|refseq:NP_566050.1|interpro:IPR017250(Histone deacetylase complex, SAP18 subunit)|interpro:IPR010516(Sin3 associated polypeptide p18)|interpro:IPR042534 - - - figure legend:Supplementary Data 3, Fig. 7a|comment:One of the interactors AT5G44500/AT4G20440 was not captured as the IDs were not mapping to unique protein|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/21 rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 rogid:3ytzuMeRbCrxQDkzywUSvM/XmCM3702 rigid:GLUxCZkKrhA/dWTRa30M2ik93+8 false 15n label:?-? 15n label:?-? - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) intact:EBI-2013402 uniprotkb:O65655 tair:AT5G10140 intact:EBI-26976708|ensemblplants:AT4G39680.1|ensemblplants:AT4G39680.2 psi-mi:flc_arath_gene(display_short)|psi-mi:EBI-2013402(display_long) psi-mi:o65655_arath(display_long)|uniprotkb:T19P19.70(orf name)|uniprotkb:T19P19_70(orf name)|uniprotkb:At4g39680(locus name) psi-mi:"MI:0402"(chromatin immunoprecipitation assay) Bi et al. (2021) imex:IM-28999|pubmed:33574257 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-26989238|imex:IM-28999-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0250"(gene) psi-mi:"MI:0326"(protein) - refseq:NP_001078515.1|refseq:NP_195678.1|interpro:IPR034257|interpro:IPR035979|interpro:IPR032552|interpro:IPR003034(DNA-binding SAP)|interpro:IPR036361|ensemblplants:AT4G39680(gene)|ensemblplants:AT4G39680.1(transcript)|ensemblplants:AT4G39680.2(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane) - - - figure legend:Fig. 5c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-seedling)|taxid:3702(Arabidopsis thaliana) - 2021/05/13 2021/06/09 - rogid:iuKJW8wc59/lUqcW0X3F6RQu3A43702 - false binding-associated region:?-? green fluorescent protein tag:?-? - - psi-mi:"MI:1194"(reverse transcription pcr) psi-mi:"MI:1194"(reverse transcription pcr)