#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:A0A0U1RRE5 uniprotkb:Q9Y333 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-347416|uniprotkb:Q6FGG1|ensembl:ENSP00000414006|ensembl:ENSP00000414634|ensembl:ENSP00000406280|ensembl:ENSP00000364813|ensembl:ENSP00000372883|ensembl:ENSP00000403345 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:lsm2_human(display_long)|uniprotkb:LSM2(gene name)|psi-mi:LSM2(display_short)|uniprotkb:C6orf28(gene name synonym)|uniprotkb:G7B(gene name synonym)|uniprotkb:snRNP core Sm-like protein Sm-x5(gene name synonym)|uniprotkb:Small nuclear ribonuclear protein D homolog(gene name synonym)|uniprotkb:Protein G7b(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_067000.1|ensembl:ENST00000375661(transcript)|ensembl:ENST00000383391(transcript)|ensembl:ENST00000424975(transcript)|ensembl:ENST00000432122(transcript)|ensembl:ENST00000434125(transcript)|ensembl:ENST00000455705(transcript)|go:"GO:0000244"(spliceosomal tri-snRNP complex assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0031267"(small GTPase binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0120115"(Lsm2-8 complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR016654(U6 snRNA-associated Sm-like protein LSm2)|mint:Q9Y333|rcsb pdb:3JCR|rcsb pdb:5O9Z|rcsb pdb:6AH0|rcsb pdb:6AHD|rcsb pdb:6QW6|rcsb pdb:6QX9|rcsb pdb:7ABG|reactome:R-HSA-430039|reactome:R-HSA-72163|reactome:R-HSA-72165|ensembl:ENSG00000172850(gene)|ensembl:ENSG00000204392(gene)|ensembl:ENSG00000224979(gene)|ensembl:ENSG00000225998(gene)|ensembl:ENSG00000231502(gene)|ensembl:ENSG00000236826(gene)|dip:DIP-31139N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:lReyYTJxC/WlYg/ekKaqZiNNdVM9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P08670 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-353844|uniprotkb:Q15867|uniprotkb:Q15868|uniprotkb:Q15869|uniprotkb:Q548L2|uniprotkb:Q6LER9|uniprotkb:Q8N850|uniprotkb:Q96ML2|uniprotkb:Q9NTM3|uniprotkb:B0YJC2|intact:EBI-3442369|uniprotkb:D3DRU4|ensembl:ENSP00000224237|ensembl:ENSP00000446007 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:vime_human(display_long)|uniprotkb:VIM(gene name)|psi-mi:VIM(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_003371.2|ensembl:ENSG00000026025(gene)|ensembl:ENST00000224237(transcript)|ensembl:ENST00000544301(transcript)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005212"(structural constituent of eye lens)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005882"(intermediate filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0014002"(astrocyte development)|go:"GO:0016363"(nuclear matrix)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032967"(positive regulation of collagen biosynthetic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0043005"(neuron projection)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0060020"(Bergmann glial cell differentiation)|go:"GO:0070307"(lens fiber cell development)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071225"(cellular response to muramyl dipeptide)|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0097110"(scaffold protein binding)|go:"GO:1990254"(keratin filament binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR027699|interpro:IPR039008|mint:P08670|rcsb pdb:1GK4|rcsb pdb:1GK6|rcsb pdb:1GK7|rcsb pdb:3G1E|rcsb pdb:3KLT|rcsb pdb:3S4R|rcsb pdb:3SSU|rcsb pdb:3SWK|rcsb pdb:3TRT|rcsb pdb:3UF1|rcsb pdb:4MCY|rcsb pdb:4MCZ|rcsb pdb:4MD0|rcsb pdb:4MD5|rcsb pdb:4MDI|rcsb pdb:4MDJ|rcsb pdb:4YPC|rcsb pdb:4YV3|rcsb pdb:5WHF|rcsb pdb:6ATF|rcsb pdb:6ATI|rcsb pdb:6BIR|rcsb pdb:6YXK|reactome:R-HSA-264870|reactome:R-HSA-390522|reactome:R-HSA-6785807|reactome:R-HSA-9013422|reactome:R-HSA-9613829|reactome:R-HSA-9615710|reactome:R-HSA-9646399|refseq:XP_006717563.1|dip:DIP-32507N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:GhAhVuXMNxi6P5J0CfNi5l9bjRk9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P38646 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-354932|ensembl:ENSP00000297185|uniprotkb:P30036|uniprotkb:P31932|uniprotkb:Q6GU03|uniprotkb:Q9BWB7|uniprotkb:B2RCM1|uniprotkb:Q1HB43|uniprotkb:Q53H23|uniprotkb:Q9UC56 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:grp75_human(display_long)|uniprotkb:HSPA9(gene name)|psi-mi:HSPA9(display_short)|uniprotkb:GRP75(gene name synonym)|uniprotkb:HSPA9B(gene name synonym)|uniprotkb:75 kDa glucose-regulated protein(gene name synonym)|uniprotkb:Heat shock 70 kDa protein 9(gene name synonym)|uniprotkb:Peptide-binding protein 74(gene name synonym)|uniprotkb:Mortalin(gene name synonym)|uniprotkb:mt-HSP70(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) reactome:R-HSA-8949613|reactome:R-HSA-8950505|ensembl:ENSG00000113013(gene)|ensembl:ENST00000297185(transcript)|go:"GO:0001401"(SAM complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005925"(focal adhesion)|go:"GO:0006611"(protein export from nucleus)|go:"GO:0007007"(inner mitochondrial membrane organization)|go:"GO:0016226"(iron-sulfur cluster assembly)|go:"GO:0030218"(erythrocyte differentiation)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0045646"(regulation of erythrocyte differentiation)|go:"GO:0045647"(negative regulation of erythrocyte differentiation)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0140275"(MIB complex)|go:"GO:1902037"(negative regulation of hematopoietic stem cell differentiation)|go:"GO:1903707"(negative regulation of hemopoiesis)|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|go:"GO:0070062"(extracellular exosome)|interpro:IPR043129|mint:P38646|rcsb pdb:3N8E|rcsb pdb:4KBO|rcsb pdb:6NHK|rcsb pdb:6P2U|rcsb pdb:6PMT|reactome:R-HSA-1268020|reactome:R-HSA-3371453|refseq:NP_004125.3|dip:DIP-32936N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:xjSHeTKBb/lH1XNEEiMIjsM+XcE9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P08243 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-722989|uniprotkb:P08184|uniprotkb:Q15666|uniprotkb:Q549T9|uniprotkb:Q96HD0|ensembl:ENSP00000175506|ensembl:ENSP00000377845|ensembl:ENSP00000377846|uniprotkb:A4D1I8|uniprotkb:D6W5R3|uniprotkb:B4DXZ1|uniprotkb:B7ZAA9|uniprotkb:E9PCI3|uniprotkb:E9PCX6 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:asns_human(display_long)|uniprotkb:Glutamine-dependent asparagine synthetase(gene name synonym)|uniprotkb:Cell cycle control protein TS11(gene name synonym)|uniprotkb:ASNS(gene name)|psi-mi:ASNS(display_short)|uniprotkb:TS11(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_001171546.1|refseq:NP_001171547.1|refseq:NP_001171548.1|refseq:NP_001664.3|refseq:NP_597680.2|refseq:NP_899199.2|ensembl:ENSG00000070669(gene)|ensembl:ENST00000175506(transcript)|ensembl:ENST00000394308(transcript)|ensembl:ENST00000394309(transcript)|go:"GO:0001889"(liver development)|go:"GO:0004066"("asparagine synthase (glutamine-hydrolyzing) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0006529"(asparagine biosynthetic process)|go:"GO:0006541"(glutamine metabolic process)|go:"GO:0009416"(response to light stimulus)|go:"GO:0009612"(response to mechanical stimulus)|go:"GO:0009636"(response to toxic substance)|go:"GO:0031427"(response to methotrexate)|go:"GO:0032354"(response to follicle-stimulating hormone)|go:"GO:0032870"(cellular response to hormone stimulus)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043200"(response to amino acid)|go:"GO:0045931"(positive regulation of mitotic cell cycle)|go:"GO:0070981"(L-asparagine biosynthetic process)|interpro:IPR001962(Asparagine synthase)|interpro:IPR006426(Asparagine synthase, glutamine-hydrolyzing)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR017932|interpro:IPR029055|interpro:IPR033738|rcsb pdb:6GQ3|reactome:R-HSA-380994|reactome:R-HSA-8963693|reactome:R-HSA-9633012|reactome:R-HSA-9648895 - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:McR8Ve0DzWhe3JWMYLsCRChiBaY9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q9Y4Z0 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-372521|ensembl:ENSP00000469468 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:lsm4_human(display_long)|uniprotkb:Glycine-rich protein(gene name synonym)|uniprotkb:LSM4(gene name)|psi-mi:LSM4(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_036453.1|ensembl:ENSG00000130520(gene)|ensembl:ENST00000593829(transcript)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005829"(cytosol)|go:"GO:0008380"(RNA splicing)|go:"GO:0016020"(membrane)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033962"(P-body assembly)|go:"GO:0042731"(PH domain binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0043005"(neuron projection)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:0120115"(Lsm2-8 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR027141|interpro:IPR034101|rcsb pdb:3JCR|rcsb pdb:5O9Z|rcsb pdb:6AH0|rcsb pdb:6AHD|rcsb pdb:6QW6|rcsb pdb:6QX9|rcsb pdb:7ABG|reactome:R-HSA-430039|reactome:R-HSA-72163|dip:DIP-31209N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:FlaQveuBbixGvfX47pCm26xscT09606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P62310 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-348239|ensembl:ENSP00000302160|uniprotkb:Q9Y4Z1|uniprotkb:Q6IAH0 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:lsm3_human(display_long)|uniprotkb:MDS017(orf name)|uniprotkb:LSM3(gene name)|psi-mi:LSM3(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000170860(gene)|ensembl:ENST00000306024(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0030629"(U6 snRNA 3'-end binding)|go:"GO:0033962"(P-body assembly)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0120115"(Lsm2-8 complex)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034105|interpro:IPR040002|mint:P62310|rcsb pdb:3JCR|rcsb pdb:5O9Z|rcsb pdb:6AH0|rcsb pdb:6AHD|rcsb pdb:6QW6|rcsb pdb:6QX9|rcsb pdb:7ABG|reactome:R-HSA-430039|reactome:R-HSA-72163|refseq:NP_055278.1|dip:DIP-31218N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:+OnRI9eJcsd1xJe+cUCP7Y/9tt09606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P26196 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-351257|uniprotkb:Q5D048|ensembl:ENSP00000433704|ensembl:ENSP00000442266|ensembl:ENSP00000478754 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:ddx6_human(display_long)|uniprotkb:DDX6(gene name)|psi-mi:DDX6(display_short)|uniprotkb:HLR2(gene name synonym)|uniprotkb:RCK(gene name synonym)|uniprotkb:DEAD box protein 6(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p54(gene name synonym)|uniprotkb:Oncogene RCK(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_004388.2|refseq:NP_001244120.1|ensembl:ENSG00000110367(gene)|ensembl:ENST00000526070(transcript)|ensembl:ENST00000534980(transcript)|ensembl:ENST00000620157(transcript)|go:"GO:0000792"(heterochromatin)|go:"GO:0000932"(P-body)|go:"GO:0001520"(outer dense fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005912"(adherens junction)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016020"(membrane)|go:"GO:0016442"(RISC complex)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019074"(viral RNA genome packaging)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0033391"(chromatoid body)|go:"GO:0033962"(P-body assembly)|go:"GO:0034063"(stress granule assembly)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045296"(cadherin binding)|go:"GO:0045665"(negative regulation of neuron differentiation)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048515"(spermatid differentiation)|go:"GO:0061830"(concave side of sperm head)|go:"GO:0097227"(sperm annulus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1905618"(positive regulation of miRNA-mediated gene silencing by inhibition of translation)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:P26196|rcsb pdb:1VEC|rcsb pdb:2WAX|rcsb pdb:2WAY|rcsb pdb:4CRW|rcsb pdb:4CT4|rcsb pdb:4CT5|rcsb pdb:5ANR|rcsb pdb:6F9S|rcsb pdb:6S8S|reactome:R-HSA-430039|refseq:XP_005271474.1|dip:DIP-29195N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:pBOpwnVU+BmxUyC/uo2ig53QRto9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P11021 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-354921|ensembl:ENSP00000324173|uniprotkb:Q2EF78|uniprotkb:Q9NPF1|uniprotkb:Q9UK02|uniprotkb:B0QZ61 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:bip_human(display_long)|uniprotkb:HSPA5(gene name)|psi-mi:HSPA5(display_short)|uniprotkb:GRP78(gene name synonym)|uniprotkb:Immunoglobulin heavy chain-binding protein(gene name synonym)|uniprotkb:78 kDa glucose-regulated protein(gene name synonym)|uniprotkb:Binding-immunoglobulin protein(gene name synonym)|uniprotkb:Heat shock protein 70 family protein 5(gene name synonym)|uniprotkb:Heat shock protein family A member 5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000044574(gene)|ensembl:ENST00000324460(transcript)|go:"GO:0001554"(luteolysis)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005790"(smooth endoplasmic reticulum)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0006983"(ER overload response)|refseq:NP_005338.1|go:"GO:0009986"(cell surface)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0016020"(membrane)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021589"(cerebellum structural organization)|go:"GO:0021680"(cerebellar Purkinje cell layer development)|go:"GO:0021762"(substantia nigra development)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0030182"(neuron differentiation)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030496"(midbody)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031204"(posttranslational protein targeting to membrane, translocation)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0034663"(endoplasmic reticulum chaperone complex)|go:"GO:0034975"(protein folding in endoplasmic reticulum)|go:"GO:0035437"(maintenance of protein localization in endoplasmic reticulum)|go:"GO:0035690"|go:"GO:0042026"(protein refolding)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042220"(response to cocaine)|go:"GO:0042470"(melanosome)|go:"GO:0043022"(ribosome binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0045296"(cadherin binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0060904"(regulation of protein folding in endoplasmic reticulum)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071236"(cellular response to antibiotic)|go:"GO:0071277"(cellular response to calcium ion)|go:"GO:0071287"(cellular response to manganese ion)|go:"GO:0071320"(cellular response to cAMP)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0097501"(stress response to metal ion)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1901998"(toxin transport)|go:"GO:1903891"(regulation of ATF6-mediated unfolded protein response)|go:"GO:1903894"(regulation of IRE1-mediated unfolded protein response)|go:"GO:1903895"(negative regulation of IRE1-mediated unfolded protein response)|go:"GO:1903897"(regulation of PERK-mediated unfolded protein response)|go:"GO:1904313"(response to methamphetamine hydrochloride)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|interpro:IPR042050|interpro:IPR043129|mint:P11021|rcsb pdb:3IUC|rcsb pdb:3LDL|rcsb pdb:3LDN|rcsb pdb:3LDO|rcsb pdb:3LDP|rcsb pdb:5E84|rcsb pdb:5E85|rcsb pdb:5E86|rcsb pdb:5EVZ|rcsb pdb:5EX5|rcsb pdb:5EXW|rcsb pdb:5EY4|rcsb pdb:5F0X|rcsb pdb:5F1X|rcsb pdb:5F2R|rcsb pdb:6ASY|rcsb pdb:6CZ1|rcsb pdb:6DFM|rcsb pdb:6DFO|rcsb pdb:6DO2|rcsb pdb:6DWS|rcsb pdb:6ZMD|reactome:R-HSA-114608|reactome:R-HSA-3371453|reactome:R-HSA-381033|reactome:R-HSA-381042|reactome:R-HSA-381070|reactome:R-HSA-381183|reactome:R-HSA-983170|dip:DIP-33189N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:O8nTjCciNhD3QsbZmbolQ1IIMn49606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:O15116 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-347619|uniprotkb:B2R5E6|ensembl:ENSP00000310596 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:lsm1_human(display_long)|uniprotkb:LSM1(gene name)|psi-mi:LSM1(display_short)|uniprotkb:CASM(gene name synonym)|uniprotkb:Cancer-associated Sm-like(gene name synonym)|uniprotkb:Small nuclear ribonuclear CaSm(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_055277.1|dip:DIP-31130N|ensembl:ENSG00000175324(gene)|ensembl:ENST00000311351(transcript)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000339"(RNA cap binding)|go:"GO:0000375"(RNA splicing, via transesterification reactions)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0016070"(RNA metabolic process)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0045665"(negative regulation of neuron differentiation)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034104|interpro:IPR044642|reactome:R-HSA-430039|go:"GO:0000932"(P-body) - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:4ZjCoUTZoEAWqp5wvQDTcTr4gs49606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q86TB9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-2562092|uniprotkb:Q8N9M6|uniprotkb:Q2TA86|uniprotkb:Q8NI63|uniprotkb:Q6P166|intact:EBI-2824962|uniprotkb:B3KXT9|ensembl:ENSP00000300146 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:patl1_human(display_long)|uniprotkb:PATL1(gene name)|psi-mi:PATL1(display_short)|uniprotkb:PAT1-like protein 1(gene name synonym)|uniprotkb:OK/KNS-cl.5(orf name)|uniprotkb:Protein PAT1 homolog b(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_689929.2|ensembl:ENSG00000166889(gene)|ensembl:ENST00000300146(transcript)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0016605"(PML body)|go:"GO:0016607"(nuclear speck)|go:"GO:0033962"(P-body assembly)|go:"GO:0034046"("poly(G) binding")|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR019167|interpro:IPR039900|rcsb pdb:2XEQ|rcsb pdb:2XER|rcsb pdb:2XES|reactome:R-HSA-430039 - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:zSppgni6nHKLE+wKkvoXmECuXB09606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q96F86 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-997311|uniprotkb:Q9H797|uniprotkb:B3KPH0|uniprotkb:D3DW61|ensembl:ENSP00000497737|ensembl:ENSP00000320503|ensembl:ENSP00000401343|ensembl:ENSP00000455580 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc3_human(display_long)|uniprotkb:YjeF domain-containing protein 1(gene name synonym)|uniprotkb:LSM16 homolog(gene name synonym)|uniprotkb:EDC3(gene name)|psi-mi:EDC3(display_short)|uniprotkb:PP844(orf name)|uniprotkb:LSM16(gene name synonym)|uniprotkb:YJDC(gene name synonym)|uniprotkb:YJEFN2(gene name synonym)|uniprotkb:YjeF N-terminal domain-containing protein 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_001135915.1|refseq:NP_001135916.1|refseq:NP_079359.2|ensembl:ENST00000315127(transcript)|ensembl:ENST00000426797(transcript)|ensembl:ENST00000568176(transcript)|ensembl:ENST00000647659(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0033962"(P-body assembly)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:1990174"(phosphodiesterase decapping endonuclease activity)|interpro:IPR004443(YjeF-related protein, N-terminal)|interpro:IPR019050|interpro:IPR025609|interpro:IPR025762|interpro:IPR034107|interpro:IPR036652|mint:Q96F86|rcsb pdb:2VC8|rcsb pdb:2WAX|rcsb pdb:2WAY|rcsb pdb:3D3J|rcsb pdb:3D3K|rcsb pdb:6S8S|reactome:R-HSA-430039|ensembl:ENSG00000179151(gene)|dip:DIP-35516N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:AFS114ghTqHNid3eOFB7iQsfwAg9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q9UK45 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-348372|ensembl:ENSP00000252622 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:lsm7_human(display_long)|uniprotkb:LSM7(gene name)|psi-mi:LSM7(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_057283.1|interpro:IPR017132(U6 snRNA-associated Sm-like protein LSm7)|interpro:IPR044641|rcsb pdb:3JCR|rcsb pdb:5O9Z|rcsb pdb:6AH0|rcsb pdb:6AHD|rcsb pdb:6QW6|rcsb pdb:6QX9|rcsb pdb:7ABG|reactome:R-HSA-430039|reactome:R-HSA-72163|go:"GO:0005689"(U12-type spliceosomal complex)|go:"GO:0005829"(cytosol)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:0120115"(Lsm2-8 complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|ensembl:ENSG00000130332(gene)|ensembl:ENST00000252622(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005688"(U6 snRNP)|dip:DIP-31129N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:vT1gI3yzYl37cX++CUGdJowAL909606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q9NPI6 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-374238|ensembl:ENSP00000476386|uniprotkb:B4DHN9|uniprotkb:U3KQM8 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1a_human(display_long)|uniprotkb:DCP1A(gene name)|psi-mi:DCP1A(display_short)|uniprotkb:Transcription factor SMIF(gene name synonym)|uniprotkb:Smad4-interacting transcriptional co-activator(gene name synonym)|uniprotkb:SMIF(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000272886(gene)|ensembl:ENST00000610213(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019894"(kinesin binding)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q9NPI6|rcsb pdb:2WX3|rcsb pdb:4B6H|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-975957|refseq:NP_060873.4|refseq:NP_001277133.1|refseq:NP_001277136.1|refseq:NP_001277134.1|refseq:NP_001277135.1|dip:DIP-31292N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:KIg2pPmAEIiig2SXAJNziN91oCY9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q8IU60 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-521577|uniprotkb:Q6P2D4|uniprotkb:Q7Z5W5|uniprotkb:Q8NBG5|uniprotkb:C9J778|ensembl:ENSP00000373715 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp2_human(display_long)|uniprotkb:Nucleoside diphosphate-linked moiety X motif 20(gene name synonym)|uniprotkb:DCP2(gene name)|psi-mi:DCP2(display_short)|uniprotkb:NUDT20(gene name synonym)|uniprotkb:mRNA-decapping enzyme 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_001229306.1|refseq:NP_689837.2|dip:DIP-31126N|ensembl:ENSG00000172795(gene)|ensembl:ENST00000389063(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0004534"(5'-3' exoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016442"(RISC complex)|go:"GO:0016896"(exoribonuclease activity, producing 5'-phosphomonoesters)|go:"GO:0030054"(cell junction)|go:"GO:0030145"(manganese ion binding)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0050072"("m7G(5')pppN diphosphatase activity")|go:"GO:0070034"(telomerase RNA binding)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:1904872"(regulation of telomerase RNA localization to Cajal body)|interpro:IPR000086(NUDIX hydrolase, core)|interpro:IPR007722(Dcp2, box A)|interpro:IPR015797(NUDIX)|interpro:IPR020084|interpro:IPR036189|interpro:IPR044099|rcsb pdb:5MP0|rcsb pdb:5QOH|rcsb pdb:5QOI|rcsb pdb:5QOJ|rcsb pdb:5QOK|rcsb pdb:5QOL|rcsb pdb:5QOM|rcsb pdb:5QON|rcsb pdb:5QOO|rcsb pdb:5QOP|rcsb pdb:5QOQ|rcsb pdb:5QOR|rcsb pdb:5QOS|rcsb pdb:5QOT|rcsb pdb:5QOU|rcsb pdb:5QOV|rcsb pdb:5QOW|rcsb pdb:5QOX|rcsb pdb:5QOY|rcsb pdb:5QOZ|rcsb pdb:5QP0|rcsb pdb:5QP1|rcsb pdb:5QP2|rcsb pdb:5QP3|rcsb pdb:5QP4|rcsb pdb:5QP5|rcsb pdb:5QP6|rcsb pdb:5QP7|rcsb pdb:5QP8|rcsb pdb:5QP9|rcsb pdb:5QPA|rcsb pdb:5QPB|rcsb pdb:5QPC|reactome:R-HSA-380994|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-450604 - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:3Bo/mLVHBcFZ4VmRqgvE2PWTw+Y9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q8IZD4 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-521595|ensembl:ENSP00000280665|ensembl:ENSP00000494635|uniprotkb:Q86XH9|uniprotkb:Q96BP8|uniprotkb:Q96MZ8|uniprotkb:B4DRD1 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1b_human(display_long)|uniprotkb:DCP1B(gene name)|psi-mi:DCP1B(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000151065(gene)|ensembl:ENSG00000284850(gene)|ensembl:ENST00000280665(transcript)|ensembl:ENST00000647122(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q8IZD4|reactome:R-HSA-430039|refseq:NP_689853.3|dip:DIP-31289N|refseq:XP_011519229.1 - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:fb+/Ls2ohlQHbAa9FZWzpIAH3sU9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058105|imex:IM-29153-21 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2a; Supplementary Data Set 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:7dqhYeuLxyEulUZXQXML4r5nNjU false flag tag:n-n - - - psi-mi:"MI:0102"(sequence tag identification) psi-mi:"MI:0102"(sequence tag identification) uniprotkb:A0A0U1RRE5 uniprotkb:P26196 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-351257|uniprotkb:Q5D048|ensembl:ENSP00000433704|ensembl:ENSP00000442266|ensembl:ENSP00000478754 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:ddx6_human(display_long)|uniprotkb:DDX6(gene name)|psi-mi:DDX6(display_short)|uniprotkb:HLR2(gene name synonym)|uniprotkb:RCK(gene name synonym)|uniprotkb:DEAD box protein 6(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p54(gene name synonym)|uniprotkb:Oncogene RCK(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_004388.2|refseq:NP_001244120.1|ensembl:ENSG00000110367(gene)|ensembl:ENST00000526070(transcript)|ensembl:ENST00000534980(transcript)|ensembl:ENST00000620157(transcript)|go:"GO:0000792"(heterochromatin)|go:"GO:0000932"(P-body)|go:"GO:0001520"(outer dense fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005912"(adherens junction)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016020"(membrane)|go:"GO:0016442"(RISC complex)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0019074"(viral RNA genome packaging)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0033391"(chromatoid body)|go:"GO:0033962"(P-body assembly)|go:"GO:0034063"(stress granule assembly)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0045296"(cadherin binding)|go:"GO:0045665"(negative regulation of neuron differentiation)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048515"(spermatid differentiation)|go:"GO:0061830"(concave side of sperm head)|go:"GO:0097227"(sperm annulus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1905618"(positive regulation of miRNA-mediated gene silencing by inhibition of translation)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:P26196|rcsb pdb:1VEC|rcsb pdb:2WAX|rcsb pdb:2WAY|rcsb pdb:4CRW|rcsb pdb:4CT4|rcsb pdb:4CT5|rcsb pdb:5ANR|rcsb pdb:6F9S|rcsb pdb:6S8S|reactome:R-HSA-430039|refseq:XP_005271474.1|dip:DIP-29195N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:pBOpwnVU+BmxUyC/uo2ig53QRto9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q96F86 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-997311|uniprotkb:Q9H797|uniprotkb:B3KPH0|uniprotkb:D3DW61|ensembl:ENSP00000497737|ensembl:ENSP00000320503|ensembl:ENSP00000401343|ensembl:ENSP00000455580 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc3_human(display_long)|uniprotkb:YjeF domain-containing protein 1(gene name synonym)|uniprotkb:LSM16 homolog(gene name synonym)|uniprotkb:EDC3(gene name)|psi-mi:EDC3(display_short)|uniprotkb:PP844(orf name)|uniprotkb:LSM16(gene name synonym)|uniprotkb:YJDC(gene name synonym)|uniprotkb:YJEFN2(gene name synonym)|uniprotkb:YjeF N-terminal domain-containing protein 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_001135915.1|refseq:NP_001135916.1|refseq:NP_079359.2|ensembl:ENST00000315127(transcript)|ensembl:ENST00000426797(transcript)|ensembl:ENST00000568176(transcript)|ensembl:ENST00000647659(transcript)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0033962"(P-body assembly)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:1990174"(phosphodiesterase decapping endonuclease activity)|interpro:IPR004443(YjeF-related protein, N-terminal)|interpro:IPR019050|interpro:IPR025609|interpro:IPR025762|interpro:IPR034107|interpro:IPR036652|mint:Q96F86|rcsb pdb:2VC8|rcsb pdb:2WAX|rcsb pdb:2WAY|rcsb pdb:3D3J|rcsb pdb:3D3K|rcsb pdb:6S8S|reactome:R-HSA-430039|ensembl:ENSG00000179151(gene)|dip:DIP-35516N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:AFS114ghTqHNid3eOFB7iQsfwAg9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q86TB9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-2562092|uniprotkb:Q8N9M6|uniprotkb:Q2TA86|uniprotkb:Q8NI63|uniprotkb:Q6P166|intact:EBI-2824962|uniprotkb:B3KXT9|ensembl:ENSP00000300146 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:patl1_human(display_long)|uniprotkb:PATL1(gene name)|psi-mi:PATL1(display_short)|uniprotkb:PAT1-like protein 1(gene name synonym)|uniprotkb:OK/KNS-cl.5(orf name)|uniprotkb:Protein PAT1 homolog b(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_689929.2|ensembl:ENSG00000166889(gene)|ensembl:ENST00000300146(transcript)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005829"(cytosol)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0016605"(PML body)|go:"GO:0016607"(nuclear speck)|go:"GO:0033962"(P-body assembly)|go:"GO:0034046"("poly(G) binding")|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR019167|interpro:IPR039900|rcsb pdb:2XEQ|rcsb pdb:2XER|rcsb pdb:2XES|reactome:R-HSA-430039 - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:zSppgni6nHKLE+wKkvoXmECuXB09606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q8IU60 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-521577|uniprotkb:Q6P2D4|uniprotkb:Q7Z5W5|uniprotkb:Q8NBG5|uniprotkb:C9J778|ensembl:ENSP00000373715 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp2_human(display_long)|uniprotkb:Nucleoside diphosphate-linked moiety X motif 20(gene name synonym)|uniprotkb:DCP2(gene name)|psi-mi:DCP2(display_short)|uniprotkb:NUDT20(gene name synonym)|uniprotkb:mRNA-decapping enzyme 2(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) refseq:NP_001229306.1|refseq:NP_689837.2|dip:DIP-31126N|ensembl:ENSG00000172795(gene)|ensembl:ENST00000389063(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0004534"(5'-3' exoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016442"(RISC complex)|go:"GO:0016896"(exoribonuclease activity, producing 5'-phosphomonoesters)|go:"GO:0030054"(cell junction)|go:"GO:0030145"(manganese ion binding)|go:"GO:0032211"(negative regulation of telomere maintenance via telomerase)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0050072"("m7G(5')pppN diphosphatase activity")|go:"GO:0070034"(telomerase RNA binding)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:1904872"(regulation of telomerase RNA localization to Cajal body)|interpro:IPR000086(NUDIX hydrolase, core)|interpro:IPR007722(Dcp2, box A)|interpro:IPR015797(NUDIX)|interpro:IPR020084|interpro:IPR036189|interpro:IPR044099|rcsb pdb:5MP0|rcsb pdb:5QOH|rcsb pdb:5QOI|rcsb pdb:5QOJ|rcsb pdb:5QOK|rcsb pdb:5QOL|rcsb pdb:5QOM|rcsb pdb:5QON|rcsb pdb:5QOO|rcsb pdb:5QOP|rcsb pdb:5QOQ|rcsb pdb:5QOR|rcsb pdb:5QOS|rcsb pdb:5QOT|rcsb pdb:5QOU|rcsb pdb:5QOV|rcsb pdb:5QOW|rcsb pdb:5QOX|rcsb pdb:5QOY|rcsb pdb:5QOZ|rcsb pdb:5QP0|rcsb pdb:5QP1|rcsb pdb:5QP2|rcsb pdb:5QP3|rcsb pdb:5QP4|rcsb pdb:5QP5|rcsb pdb:5QP6|rcsb pdb:5QP7|rcsb pdb:5QP8|rcsb pdb:5QP9|rcsb pdb:5QPA|rcsb pdb:5QPB|rcsb pdb:5QPC|reactome:R-HSA-380994|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-450604 - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:3Bo/mLVHBcFZ4VmRqgvE2PWTw+Y9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q8IZD4 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-521595|ensembl:ENSP00000280665|ensembl:ENSP00000494635|uniprotkb:Q86XH9|uniprotkb:Q96BP8|uniprotkb:Q96MZ8|uniprotkb:B4DRD1 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1b_human(display_long)|uniprotkb:DCP1B(gene name)|psi-mi:DCP1B(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000151065(gene)|ensembl:ENSG00000284850(gene)|ensembl:ENST00000280665(transcript)|ensembl:ENST00000647122(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q8IZD4|reactome:R-HSA-430039|refseq:NP_689853.3|dip:DIP-31289N|refseq:XP_011519229.1 - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:fb+/Ls2ohlQHbAa9FZWzpIAH3sU9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q9NPI6 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-374238|ensembl:ENSP00000476386|uniprotkb:B4DHN9|uniprotkb:U3KQM8 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1a_human(display_long)|uniprotkb:DCP1A(gene name)|psi-mi:DCP1A(display_short)|uniprotkb:Transcription factor SMIF(gene name synonym)|uniprotkb:Smad4-interacting transcriptional co-activator(gene name synonym)|uniprotkb:SMIF(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058145|imex:IM-29153-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000272886(gene)|ensembl:ENST00000610213(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019894"(kinesin binding)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q9NPI6|rcsb pdb:2WX3|rcsb pdb:4B6H|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-975957|refseq:NP_060873.4|refseq:NP_001277133.1|refseq:NP_001277136.1|refseq:NP_001277134.1|refseq:NP_001277135.1|dip:DIP-31292N - - - figure legend:Fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:KIg2pPmAEIiig2SXAJNziN91oCY9606 rigid:m5BmMMziY8DZ4ix8ctuZZgAj2To false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058329|imex:IM-29153-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false flag tag:n-n myc tag:n-n|flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058372|imex:IM-29153-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 3a|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false green fluorescent protein tag:?-?|necessary binding region:22-41 myc tag:n-n|flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q6P2E9 uniprotkb:A0A0U1RRE5 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058430|imex:IM-29153-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) - - - figure legend:Fig. 3c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false myc tag:n-n|flag tag:n-n green fluorescent protein tag:n-n|sufficient binding region:22-41 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q6P2E9 uniprotkb:A0A0U1RRE5 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058444|imex:IM-29153-23 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) - - - figure legend:Fig. 3b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false myc tag:n-n|flag tag:n-n green fluorescent protein tag:c-c|sufficient binding region:22-41 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q6P2E9 uniprotkb:A0A0U1RRE5 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058456|imex:IM-29153-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) - - - figure legend:Fig. 3e|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/09 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false myc tag:n-n|flag tag:n-n mutation with no effect:39-39|mutation with no effect:40-40|mutation with no effect:41-41|mutation with no effect:29-29|mutation disrupting interaction strength:30-30|mutation with no effect:32-32|mutation with no effect:33-33|mutation disrupting interaction strength:34-34|mutation with no effect:35-35|mutation with no effect:36-36|mutation with no effect:38-38|mutation with no effect:37-37|flag tag:n-n|sufficient binding region:22-41|mutation with no effect:22-22|mutation with no effect:23-23|mutation with no effect:24-24|mutation with no effect:25-25|mutation with no effect:26-26|mutation with no effect:27-27|mutation with no effect:28-28 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q9NPI6 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-374238|ensembl:ENSP00000476386|uniprotkb:B4DHN9|uniprotkb:U3KQM8 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1a_human(display_long)|uniprotkb:DCP1A(gene name)|psi-mi:DCP1A(display_short)|uniprotkb:Transcription factor SMIF(gene name synonym)|uniprotkb:Smad4-interacting transcriptional co-activator(gene name synonym)|uniprotkb:SMIF(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058702|imex:IM-29153-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000272886(gene)|ensembl:ENST00000610213(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019894"(kinesin binding)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q9NPI6|rcsb pdb:2WX3|rcsb pdb:4B6H|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-975957|refseq:NP_060873.4|refseq:NP_001277133.1|refseq:NP_001277136.1|refseq:NP_001277134.1|refseq:NP_001277135.1|dip:DIP-31292N - - - figure legend:Supp. Fig. 5|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-293t)|taxid:9606(Homo sapiens 293 cells transformed with SV40 large T antigen) - 2021/08/05 2021/08/10 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:KIg2pPmAEIiig2SXAJNziN91oCY9606 rigid:3PtBbNuzPfpVOqGJO5ubKM5sPhA false flag tag:n-n myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0030"(cross-linking study) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-27058360|imex:IM-29153-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2E|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/17 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false dye label:?-? myc tag:n-n|flag tag:n-n 1 1 psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0096"(pull down) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0486"(UniProt) intact:EBI-27058688|imex:IM-29153-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Supp. Fig. 4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/10 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false glutathione s tranferase tag:n-n|flag tag:n-n flag tag:n-n|myc tag:n-n 1 1 psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-27058348|imex:IM-29153-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2D|comment:Interaction observed when cells treated with siRNA for DCP1A and DCP2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/10 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:6/sR7o49lpvpVhelS1JA/u6toKQ false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q9NPI6 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-374238|ensembl:ENSP00000476386|uniprotkb:B4DHN9|uniprotkb:U3KQM8 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1a_human(display_long)|uniprotkb:DCP1A(gene name)|psi-mi:DCP1A(display_short)|uniprotkb:Transcription factor SMIF(gene name synonym)|uniprotkb:Smad4-interacting transcriptional co-activator(gene name synonym)|uniprotkb:SMIF(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27067675|imex:IM-29153-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000272886(gene)|ensembl:ENST00000610213(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0019894"(kinesin binding)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:1903608"(protein localization to cytoplasmic stress granule)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q9NPI6|rcsb pdb:2WX3|rcsb pdb:4B6H|reactome:R-HSA-430039|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-975957|refseq:NP_060873.4|refseq:NP_001277133.1|refseq:NP_001277136.1|refseq:NP_001277134.1|refseq:NP_001277135.1|dip:DIP-31292N - - - figure legend:Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/17 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:KIg2pPmAEIiig2SXAJNziN91oCY9606 rigid:0UKa0KElnjPrcOBxlratPZWn/Tg false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q6P2E9 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-1006038|uniprotkb:Q13025|uniprotkb:Q13826|uniprotkb:Q6ZR12|uniprotkb:Q7Z6H7|uniprotkb:A6NGM1|uniprotkb:A8K4T4|ensembl:ENSP00000351811 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:edc4_human(display_long)|uniprotkb:Human enhancer of decapping large subunit(gene name synonym)|uniprotkb:Autoantigen Ge-1(gene name synonym)|uniprotkb:Autoantigen RCD-8(gene name synonym)|uniprotkb:EDC4(gene name)|psi-mi:EDC4(display_short)|uniprotkb:HEDLS(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27067675|imex:IM-29153-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000038358(gene)|interpro:IPR036322|mint:Q6P2E9|reactome:R-HSA-430039|ensembl:ENST00000358933(transcript)|go:"GO:0000932"(P-body)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016020"(membrane)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR032401|refseq:NP_055144.3|dip:DIP-31192N - - - figure legend:Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/17 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:V5obZo71xmJbNRv5fc+o7wNdb+Y9606 rigid:0UKa0KElnjPrcOBxlratPZWn/Tg false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:A0A0U1RRE5 uniprotkb:Q8IZD4 intact:EBI-27058088|intact:EBI-28986672|ensembl:ENSP00000489486|ensembl:ENSP00000489583|ensembl:ENSP00000490217 intact:EBI-521595|ensembl:ENSP00000280665|ensembl:ENSP00000494635|uniprotkb:Q86XH9|uniprotkb:Q96BP8|uniprotkb:Q96MZ8|uniprotkb:B4DRD1 psi-mi:nbdy_human(display_long)|uniprotkb:NBDY(gene name)|psi-mi:NBDY(display_short)|uniprotkb:LINC01420(gene name synonym)|uniprotkb:P-body dissociating protein(gene name synonym)|uniprotkb:Protein NoBody(gene name synonym) psi-mi:dcp1b_human(display_long)|uniprotkb:DCP1B(gene name)|psi-mi:DCP1B(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) D'Lima et al. (2017) pubmed:27918561|imex:IM-29153 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0486"(UniProt) intact:EBI-27067675|imex:IM-29153-24 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001335058.1|ensembl:ENSP00000489583|ensembl:ENSP00000489486|ensembl:ENSP00000490217|ensembl:ENSG00000204272(gene)|ensembl:ENST00000374922(transcript)|ensembl:ENST00000423617(transcript)|ensembl:ENST00000637096(transcript)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0006397"(mRNA processing)|go:"GO:0010607"(negative regulation of cytoplasmic mRNA processing body assembly) ensembl:ENSG00000151065(gene)|ensembl:ENSG00000284850(gene)|ensembl:ENST00000280665(transcript)|ensembl:ENST00000647122(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016020"(membrane)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031087"(deadenylation-independent decapping of nuclear-transcribed mRNA)|go:"GO:0043085"(positive regulation of catalytic activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|interpro:IPR010334(Dcp1-like decapping)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR031953|mint:Q8IZD4|reactome:R-HSA-430039|refseq:NP_689853.3|dip:DIP-31289N|refseq:XP_011519229.1 - - - figure legend:Fig. 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2021/08/05 2021/08/17 rogid:PXO6iTcvaZBxsZurQdK/TivrQu09606 rogid:fb+/Ls2ohlQHbAa9FZWzpIAH3sU9606 rigid:0UKa0KElnjPrcOBxlratPZWn/Tg false flag tag:n-n - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)