#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B chebi:"CHEBI:16238" uniprotkb:Q92947 intact:EBI-1225105|chebi:"CHEBI:42388"|chebi:"CHEBI:4956"|chebi:"CHEBI:13315"|chebi:"CHEBI:21125" intact:EBI-1236978|uniprotkb:O14719|uniprotkb:A8K2Z2|ensembl:ENSP00000222214|ensembl:ENSP00000466845 psi-mi:fad(display_short)|psi-mi:"CHEBI:16238"(display_long)|intact:"Adenosine 5'-(trihydrogen pyrophosphate), 5'-5'-ester with riboflavine"(synonym)|intact:"adenosine 5'-[3-(riboflavin-5'-yl) dihydrogen diphosphate]"(synonym)|intact:FAD(synonym)|intact:Flavin adenine dinucleotide(synonym)|intact:FLAVIN-ADENINE DINUCLEOTIDE(synonym)|intact:"Riboflavin 5'-(trihydrogen diphosphate), 5'-5'-ester with adenosine"(synonym)|intact:Riboflavin 5'-adenosine diphosphate(synonym)|intact:"adenosine 5'-(3-{D-ribo-5-[7,8-dimethyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-2,3,4-trihydroxypentyl} dihydrogen diphosphate)"(iupac name) psi-mi:gcdh_human(display_long)|uniprotkb:GCDH(gene name)|psi-mi:GCDH(display_short) psi-mi:"MI:0966"(ultraviolet-visible spectroscopy) Ribeiro et al. (2020) imex:IM-28344|pubmed:31491587 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25829356|imex:IM-28344-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - refseq:NP_000150.1|refseq:NP_039663.1|ensembl:ENSG00000105607(gene)|ensembl:ENST00000222214(transcript)|ensembl:ENST00000591470(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0004361"(glutaryl-CoA dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006568"(tryptophan metabolic process)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0046949"(fatty-acyl-CoA biosynthetic process)|interpro:IPR006089(Acyl-CoA dehydrogenase, conserved site)|interpro:IPR006091(Acyl-CoA dehydrogenase/oxidase, central region)|interpro:IPR009075(Acyl-CoA dehydrogenase/oxidase C-terminal)|interpro:IPR009100(Acyl-CoA dehydrogenase/oxidase, middle and N-terminal)|interpro:IPR013786(Acyl-CoA dehydrogenase/oxidase, N-terminal)|interpro:IPR036250|interpro:IPR037069|mint:Q92947|rcsb pdb:1SIQ|rcsb pdb:1SIR|rcsb pdb:2R0M|rcsb pdb:2R0N|reactome:R-HSA-71064|go:"GO:0050660"(flavin adenine dinucleotide binding) - comment:Flavin adenine dinucleotide - figure legend:Fig. 4|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/09/15 2020/09/24 - rogid:W192IQEAyP1SdNxhI62Fh8C2UPU9606 - false - mutation with no effect:227-227(rs121434373)|mutation decreasing interaction strength:400-400(rs121434372)|his tag:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) chebi:"CHEBI:8055" uniprotkb:Q92947 intact:EBI-25829422 intact:EBI-1236978|uniprotkb:O14719|uniprotkb:A8K2Z2|ensembl:ENSP00000222214|ensembl:ENSP00000466845 psi-mi:5-methylphenazinium methyl sulfate(display_short)|psi-mi:"CHEBI:8055"(display_long)|intact:5-Methyl phenazine, methyl sulfate salt(synonym)|intact:5-Methylphenazine methylsulfate(synonym)|intact:5-Methylphenazinium methyl sulphate(synonym)|intact:Methylphenazonium methosulfate(synonym)|intact:N-Methylphenazonium methosulfate(synonym)|intact:N-Methylphenazonium methosulphate(synonym)|intact:Phenazine methosulfate(synonym)|intact:Phenazine methosulphate(synonym)|intact:PMS(synonym)|intact:5-methylphenazin-5-ium methyl sulfate(iupac name) psi-mi:gcdh_human(display_long)|uniprotkb:GCDH(gene name)|psi-mi:GCDH(display_short) psi-mi:"MI:0979"(oxidoreductase assay) Ribeiro et al. (2020) imex:IM-28344|pubmed:31491587 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0945"(oxidoreductase activity electron transfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25829437|imex:IM-28344-3 - - psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - refseq:NP_000150.1|refseq:NP_039663.1|ensembl:ENSG00000105607(gene)|ensembl:ENST00000222214(transcript)|ensembl:ENST00000591470(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0004361"(glutaryl-CoA dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006568"(tryptophan metabolic process)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0046949"(fatty-acyl-CoA biosynthetic process)|interpro:IPR006089(Acyl-CoA dehydrogenase, conserved site)|interpro:IPR006091(Acyl-CoA dehydrogenase/oxidase, central region)|interpro:IPR009075(Acyl-CoA dehydrogenase/oxidase C-terminal)|interpro:IPR009100(Acyl-CoA dehydrogenase/oxidase, middle and N-terminal)|interpro:IPR013786(Acyl-CoA dehydrogenase/oxidase, N-terminal)|interpro:IPR036250|interpro:IPR037069|mint:Q92947|rcsb pdb:1SIQ|rcsb pdb:1SIR|rcsb pdb:2R0M|rcsb pdb:2R0N|reactome:R-HSA-71064|go:"GO:0050660"(flavin adenine dinucleotide binding) - - - figure legend:Table 2|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/09/15 2020/09/25 - rogid:W192IQEAyP1SdNxhI62Fh8C2UPU9606 - false - mutation decreasing interaction rate:227-227(rs121434373)|mutation decreasing interaction rate:400-400(rs121434372)|his tag:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q16134 uniprotkb:Q92947 intact:EBI-2870454|uniprotkb:Q7Z347|uniprotkb:B4E3R9|uniprotkb:J3KND9|ensembl:ENSP00000426638 intact:EBI-1236978|uniprotkb:O14719|uniprotkb:A8K2Z2|ensembl:ENSP00000222214|ensembl:ENSP00000466845 psi-mi:etfd_human(display_long)|uniprotkb:ETFDH(gene name)|psi-mi:ETFDH(display_short)|uniprotkb:Electron-transferring-flavoprotein dehydrogenase(gene name synonym) psi-mi:gcdh_human(display_long)|uniprotkb:GCDH(gene name)|psi-mi:GCDH(display_short) psi-mi:"MI:0979"(oxidoreductase assay) Ribeiro et al. (2020) imex:IM-28344|pubmed:31491587 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0945"(oxidoreductase activity electron transfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25829758|imex:IM-28344-5 - - psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004444.2|refseq:NP_001268666.1|ensembl:ENSG00000171503(gene)|ensembl:ENST00000511912(transcript)|go:"GO:0004174"(electron-transferring-flavoprotein dehydrogenase activity)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0009055"(electron transfer activity)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0022900"(electron transport chain)|go:"GO:0022904"(respiratory electron transport chain)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0043783"(oxidoreductase activity, acting on metal ions, flavin as acceptor)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0048039"(ubiquinone binding)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR017896|interpro:IPR036188|interpro:IPR040156|reactome:R-HSA-611105 refseq:NP_000150.1|refseq:NP_039663.1|ensembl:ENSG00000105607(gene)|ensembl:ENST00000222214(transcript)|ensembl:ENST00000591470(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0004361"(glutaryl-CoA dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006568"(tryptophan metabolic process)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0046949"(fatty-acyl-CoA biosynthetic process)|interpro:IPR006089(Acyl-CoA dehydrogenase, conserved site)|interpro:IPR006091(Acyl-CoA dehydrogenase/oxidase, central region)|interpro:IPR009075(Acyl-CoA dehydrogenase/oxidase C-terminal)|interpro:IPR009100(Acyl-CoA dehydrogenase/oxidase, middle and N-terminal)|interpro:IPR013786(Acyl-CoA dehydrogenase/oxidase, N-terminal)|interpro:IPR036250|interpro:IPR037069|mint:Q92947|rcsb pdb:1SIQ|rcsb pdb:1SIR|rcsb pdb:2R0M|rcsb pdb:2R0N|reactome:R-HSA-71064|go:"GO:0050660"(flavin adenine dinucleotide binding) - - - figure legend:Table 2|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2020/09/15 2020/09/23 rogid:QxTEfbpk0s15/wNFzKQk7d2h5jQ9606 rogid:W192IQEAyP1SdNxhI62Fh8C2UPU9606 rigid:Dp7D6z2xboQzi7CF94LqgVtGwbA false - his tag:c-c|mutation disrupting interaction rate:227-227(rs121434373)|mutation decreasing interaction rate:400-400(rs121434372) - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) chebi:"CHEBI:15524" uniprotkb:Q92947 intact:EBI-25829794|chebi:"CHEBI:5436"|chebi:"CHEBI:14326"|chebi:"CHEBI:24332" intact:EBI-1236978|uniprotkb:O14719|uniprotkb:A8K2Z2|ensembl:ENSP00000222214|ensembl:ENSP00000466845 psi-mi:glutaryl-coa(display_short)|psi-mi:"CHEBI:15524"(display_long)|intact:4-carboxybutanoyl-coenzyme A(synonym)|intact:"coenzyme A, S-(hydrogen pentanedioate)"(synonym)|intact:Glutaryl-CoA(synonym)|intact:glutaryl-coenzyme A(synonym)|intact:"3'-phosphoadenosine 5'-{3-[(3R)-4-{[3-({2-[(4-carboxybutanoyl)sulfanyl]ethyl}amino)-3-oxopropyl]amino}-3-hydroxy-2,2-dimethyl-4-oxobutyl] dihydrogen diphosphate}"(iupac name)|intact:4-carboxybutanoyl-CoA(synonym) psi-mi:gcdh_human(display_long)|uniprotkb:GCDH(gene name)|psi-mi:GCDH(display_short) psi-mi:"MI:0979"(oxidoreductase assay) Ribeiro et al. (2020) imex:IM-28344|pubmed:31491587 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0945"(oxidoreductase activity electron transfer reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-25829769|imex:IM-28344-7 - - psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - refseq:NP_000150.1|refseq:NP_039663.1|ensembl:ENSG00000105607(gene)|ensembl:ENST00000222214(transcript)|ensembl:ENST00000591470(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0004361"(glutaryl-CoA dehydrogenase activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006568"(tryptophan metabolic process)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0046949"(fatty-acyl-CoA biosynthetic process)|interpro:IPR006089(Acyl-CoA dehydrogenase, conserved site)|interpro:IPR006091(Acyl-CoA dehydrogenase/oxidase, central region)|interpro:IPR009075(Acyl-CoA dehydrogenase/oxidase C-terminal)|interpro:IPR009100(Acyl-CoA dehydrogenase/oxidase, middle and N-terminal)|interpro:IPR013786(Acyl-CoA dehydrogenase/oxidase, N-terminal)|interpro:IPR036250|interpro:IPR037069|mint:Q92947|rcsb pdb:1SIQ|rcsb pdb:1SIR|rcsb pdb:2R0M|rcsb pdb:2R0N|reactome:R-HSA-71064|go:"GO:0050660"(flavin adenine dinucleotide binding) - - - figure legend:Table 3, Fig. 5|dataset:Rare diseases - Interactions investigated in the context of Rare genetic disease|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) kcat:3.1x1^1(second -1) 2020/09/15 2020/09/25 - rogid:W192IQEAyP1SdNxhI62Fh8C2UPU9606 - false - his tag:c-c|mutation disrupting interaction rate:227-227(rs121434373)|mutation decreasing interaction rate:400-400(rs121434372) - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)