#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:C4QZ45 uniprotkb:C4QZQ7 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800027|ensemblfungi:CAY68731 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R009 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800218|ensemblfungi:CAY68833 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r009_kompg(display_long)|uniprotkb:PAS_chr2-1_0223(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY68833(transcript)|ensemblfungi:PAS_chr2-1_0223(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491113.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR023580|interpro:IPR020789|interpro:IPR000268(RNA polymerases, N/8 Kd subunits)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:1ay4K0OWVYfU09LaWaEKYqDEXuk644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R0E6 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-21272943|ensemblfungi:CAY68970 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r0e6_kompg(display_long)|uniprotkb:PAS_chr2-1_0350(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:PAS_chr2-1_0350(gene)|go:"GO:0000182"(rDNA binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000776"(kinetochore)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0006342"|go:"GO:0006370"(7-methylguanosine mRNA capping)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0031934"(mating-type region heterochromatin)|go:"GO:0032044"(DSIF complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:2000232"(regulation of rRNA processing)|go:"GO:2001208"(negative regulation of transcription elongation by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|ensemblfungi:CAY68970(transcript)|refseq:XP_002491250.1|rcsb pdb:5XON|interpro:IPR029040|interpro:IPR009287(Transcription initiation Spt4)|interpro:IPR022800|interpro:IPR038510 - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:ywCrJ9W9Xggw4QlYjFSer87BELk644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R1V1 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800134|ensemblfungi:CAY69475 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r1v1_kompg(display_long)|uniprotkb:PAS_chr2-2_0434(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY69475(transcript)|ensemblfungi:PAS_chr2-2_0434(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491755.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR020708|interpro:IPR006110(RNA polymerase Rpb6)|interpro:IPR012293(RNA polymerase subunit, RPB6/omega)|interpro:IPR028363|interpro:IPR036161|interpro:IPR006111(DNA-directed RNA polymerase, 14 to 18 kDa subunit)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:sOgXLbXs4iRGdaUFfb88ZVm1W98644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R273 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800178|ensemblfungi:CAY69597 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r273_kompg(display_long)|uniprotkb:PAS_chr2-2_0309(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY69597(transcript)|ensemblfungi:PAS_chr2-2_0309(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491877.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR005570(RNA polymerase, Rpb8)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:MnvasHhqga4MIKsh8kH1/bpM0wc644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R2U9 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800081|ensemblfungi:CAY69823 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r2u9_kompg(display_long)|uniprotkb:PAS_chr2-2_0104(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|ensemblfungi:CAY69823(transcript)|ensemblfungi:PAS_chr2-2_0104(gene)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031990"(mRNA export from nucleus in response to heat stress)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0045948"(positive regulation of translational initiation)|rcsb pdb:6INQ|refseq:XP_002492103.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR010997(HRDC-like)|interpro:IPR006590(RNA polymerase II, Rpb4, core)|interpro:IPR005574(RNA polymerase II, Rpb4)|interpro:IPR038324|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:/017Xpkf83C3N7U8UYAXzDWDlv8644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R370 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-21272973|ensemblfungi:CAY71204 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r370_kompg(display_long)|uniprotkb:Chromatin elongation factor spt5(gene name synonym)|uniprotkb:transcription Elongation factor SPT5(gene name synonym)|uniprotkb:PAS_chr3_1136(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 interpro:IPR041973|interpro:IPR041975|interpro:IPR041976|interpro:IPR041977|interpro:IPR041978|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY71204(transcript)|ensemblfungi:PAS_chr3_1136(gene)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006397"(mRNA processing)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|refseq:XP_002493383.1|rcsb pdb:5XON|interpro:IPR005824(KOW)|interpro:IPR005100(Supt5 repeat)|interpro:IPR036735|interpro:IPR039385|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR039659|interpro:IPR022581|interpro:IPR017071(Transcription elongation factor Spt5)|interpro:IPR008991(Translation protein SH3-like) - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:fiReSF3elv/T+GigQdEyO6vkdHQ644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R3P8 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800108|ensemblfungi:CAY70112 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r3p8_kompg(display_long)|uniprotkb:PAS_chr3_0157(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6J50|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J51|ensemblfungi:CAY70112(transcript)|ensemblfungi:PAS_chr3_0157(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006383"(transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002492363.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR036710|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR020608|interpro:IPR035913|interpro:IPR020609|interpro:IPR039531|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:uvHyo3JNliA/f1LdlRdTrLHAhu8644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R3Z5 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800241|ensemblfungi:CAY70274 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r3z5_kompg(display_long)|uniprotkb:PAS_chr3_0244(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY70274(transcript)|ensemblfungi:PAS_chr3_0244(gene)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6INQ|refseq:XP_002492460.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR037685|interpro:IPR036603|interpro:IPR009025(DNA-directed RNA polymerase, RBP11-like)|interpro:IPR008193(DNA-directed RNA polymerase Rpb11, 13-16 kDa subunit, conserved site)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:Bcxi1i7CjZerdkNw1zlStjnDbGA644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R4Y0 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20799999|ensemblfungi:CAY70616 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r4y0_kompg(display_long)|uniprotkb:PAS_chr3_0568(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 interpro:IPR042102|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY70616(transcript)|ensemblfungi:PAS_chr3_0568(gene)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002492795.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR000684(RNA polymerase II, heptapeptide repeat, eukaryotic)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR007075(RNA polymerase Rpb1, domain 6)|interpro:IPR007073(RNA polymerase Rpb1, domain 7)|interpro:IPR038593|interpro:IPR038120|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:/Iegq8f+rYdUcNLjKKqdngz4RxI644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R7L2 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800059|ensemblfungi:CAY71587 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r7l2_kompg(display_long)|uniprotkb:PAS_chr4_0344(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY71587(transcript)|ensemblfungi:PAS_chr4_0344(gene)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6INQ|refseq:XP_002493766.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR001514(DNA-directed RNA polymerase, 30-40 kDa subunit, conserved site)|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR036603|interpro:IPR036643|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:aRUBPn6vT0brJH8ce/7n4CfRPV8644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:C4R9A1 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800159|ensemblfungi:CAY72176 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:c4r9a1_kompg(display_long)|uniprotkb:PAS_chr4_0906(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY72176(transcript)|ensemblfungi:PAS_chr4_0906(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0010590"(regulation of septum digestion after cytokinesis)|go:"GO:0097394"(telomeric repeat-containing RNA transcription by RNA polymerase II)|rcsb pdb:6INQ|refseq:XP_002494355.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR036898|interpro:IPR005576(RNA polymerase Rpb7, N-terminal)|interpro:IPR003029(S1, RNA binding)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:uE/3Z3mElfHD6zyWFofgkpflFOg644223 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:F2QMI1 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800261|ensemblfungi:CCA36628 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:f2qmi1_kompc(display_long)|uniprotkb:RPC10(gene name)|psi-mi:RPC10(display_short)|uniprotkb:PP7435_Chr1-0476(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:981350(kompc)|taxid:981350("Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CCA36628(transcript)|ensemblfungi:PP7435_CHR1-0476(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0008270"(zinc ion binding)|rcsb pdb:6INQ|rcsb pdb:5XOG|interpro:IPR006591(RNA polymerase Rbp10)|interpro:IPR029040|interpro:IPR039747|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:XNaJRCB6Mz0dez4DoFiRGfxeoZA981350 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:F2QPE6 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-20800198|ensemblfungi:CCA37274 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:f2qpe6_kompc(display_long)|uniprotkb:RPB9(gene name)|psi-mi:RPB9(display_short)|uniprotkb:PP7435_Chr1-1144(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:981350(kompc)|taxid:981350("Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CCA37274(transcript)|ensemblfungi:PP7435_CHR1-1144(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005730"(nucleolus)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006379"(mRNA cleavage)|go:"GO:0008270"(zinc ion binding)|rcsb pdb:6INQ|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|interpro:IPR019761|interpro:IPR001529(DNA-directed RNA polymerase, M/15 kDa subunit)|interpro:IPR012164(DNA-directed RNA polymerase, subunit C11/M/9)|interpro:IPR034012|interpro:IPR001222(Zinc finger, TFIIS-type)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:K8GCq9GcWsMRVlapEcuaLTOLJfc981350 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:P04908 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-358971|uniprotkb:Q76P63|uniprotkb:P28001|ensembl:ENSP00000303373|ensembl:ENSP00000483842 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:h2a1b_human(display_long)|uniprotkb:H2AC4(gene name)|psi-mi:H2AC4(display_short)|uniprotkb:H2AC8(gene name)|psi-mi:H2AC8(display_short)|uniprotkb:H2AFA(gene name synonym)|uniprotkb:H2AFM(gene name synonym)|uniprotkb:HIST1H2AB(gene name synonym)|uniprotkb:HIST1H2AE(gene name synonym)|uniprotkb:Histone H2A.2(gene name synonym)|uniprotkb:Histone H2A/a(gene name synonym)|uniprotkb:Histone H2A/m(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 refseq:NP_003504.2|refseq:NP_066390.1|ensembl:ENSG00000277075(gene)|ensembl:ENSG00000278463(gene)|ensembl:ENST00000303910(transcript)|ensembl:ENST00000615868(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006342"|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|mint:P04908|rcsb pdb:2CV5|rcsb pdb:2RVQ|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:3AYW|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WKJ|rcsb pdb:3WTP|rcsb pdb:3X1S|rcsb pdb:3X1V|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B40|rcsb pdb:5CPI|rcsb pdb:5CPJ|rcsb pdb:5CPK|rcsb pdb:5GSE|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JRG|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5Z23|rcsb pdb:5ZBX|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6ACL|rcsb pdb:6AEE|rcsb pdb:6BUZ|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IPU|rcsb pdb:6IQ4|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6KE9|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9H|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LE9|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6O1D|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6T79|rcsb pdb:6T7A|rcsb pdb:6T7B|rcsb pdb:6T7C|rcsb pdb:6T7D|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6USJ|rcsb pdb:6V92|rcsb pdb:6YOV|rcsb pdb:7BWD|rcsb pdb:7BXT|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7DBP|rcsb pdb:7K5X|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214847|reactome:R-HSA-3214858|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5689603|reactome:R-HSA-5689880|reactome:R-HSA-5689901|reactome:R-HSA-606279|reactome:R-HSA-73728|rcsb pdb:6JXD|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|dip:DIP-44197N - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:4Qno1mMYZB6FdNoojrzulWLVq849606 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:P06899 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-6150252|uniprotkb:B2R4J4|uniprotkb:O60816|ensembl:ENSP00000342886|ensembl:ENSP00000476136 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:h2b1j_human(display_long)|uniprotkb:H2BC11(gene name)|psi-mi:H2BC11(display_short)|uniprotkb:H2BFR(gene name synonym)|uniprotkb:HIST1H2BJ(gene name synonym)|uniprotkb:Histone H2B.1(gene name synonym)|uniprotkb:Histone H2B.r(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 refseq:NP_066402.2|dip:DIP-421N|ensembl:ENSG00000124635(gene)|ensembl:ENST00000339812(transcript)|ensembl:ENST00000607124(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0002227"(innate immune response in mucosa)|go:"GO:0003677"(DNA binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0010804"(negative regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:0019731"(antibacterial humoral response)|go:"GO:0031640"(killing of cells of another organism)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0050830"(defense response to Gram-positive bacterium)|go:"GO:0061844"(antimicrobial humoral immune response mediated by antimicrobial peptide)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P06899|rcsb pdb:2RVQ|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:3AYW|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WAA|rcsb pdb:3WTP|rcsb pdb:4CAY|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5B40|rcsb pdb:5CPI|rcsb pdb:5CPJ|rcsb pdb:5CPK|rcsb pdb:5FUG|rcsb pdb:5GSE|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JRG|rcsb pdb:5VEY|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5Z23|rcsb pdb:5Z30|rcsb pdb:5ZBX|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6BUZ|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IPU|rcsb pdb:6IQ4|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JOU|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6JXD|rcsb pdb:6K1I|rcsb pdb:6K1J|rcsb pdb:6K1K|rcsb pdb:6KVD|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6O1D|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6USJ|rcsb pdb:6V2K|rcsb pdb:6YOV|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7K5X|rcsb pdb:3WA9|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214847|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5689880|reactome:R-HSA-5693565|reactome:R-HSA-5693571|reactome:R-HSA-5693607|reactome:R-HSA-606279|reactome:R-HSA-69473|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8866654|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225 - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:74GQlSjGG1Ez6Uog74VXPLryKBc9606 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:P84243 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-120658|uniprotkb:P06351|uniprotkb:P33155|uniprotkb:Q5VV55|uniprotkb:Q5VV56|uniprotkb:Q66I33|uniprotkb:Q9V3W4|ensembl:ENSP00000254810|ensembl:ENSP00000355778|ensembl:ENSP00000355780|ensembl:ENSP00000355781|ensembl:ENSP00000465813|ensembl:ENSP00000466020|ensembl:ENSP00000468714|ensembl:ENSP00000499275|ensembl:ENSP00000499385|ensembl:ENSP00000499800 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:h33_human(display_long)|uniprotkb:H3-3A(gene name)|psi-mi:H3-3A(display_short)|uniprotkb:H3-3B(gene name)|psi-mi:H3-3B(display_short)|uniprotkb:H3.3A(gene name synonym)|uniprotkb:H3.3B(gene name synonym)|uniprotkb:H3F3(gene name synonym)|uniprotkb:H3F3A(gene name synonym)|uniprotkb:H3F3B(gene name synonym)|uniprotkb:PP781(orf name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 refseq:NP_002098.1|refseq:NP_005315.1|rcsb pdb:4H9N|rcsb pdb:3QL9|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:3QLA|rcsb pdb:3QLC|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4L58|rcsb pdb:4N4I|rcsb pdb:3WTP|rcsb pdb:4O62|rcsb pdb:4QQ4|rcsb pdb:4TMP|rcsb pdb:4GNE|rcsb pdb:4GNF|rcsb pdb:4U7T|rcsb pdb:4GNG|rcsb pdb:4W5A|rcsb pdb:4GU0|rcsb pdb:4GUR|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:4GUS|rcsb pdb:4GY5|rcsb pdb:5DWQ|rcsb pdb:5DX0|rcsb pdb:5JA4|rcsb pdb:5JJY|ensembl:ENSG00000132475(gene)|ensembl:ENSG00000163041(gene)|rcsb pdb:5JLB|rcsb pdb:5KDM|rcsb pdb:5X7X|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6HGT|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6J9J|rcsb pdb:6PZV|rcsb pdb:6QXZ|rcsb pdb:6R0C|rcsb pdb:6RNY|rcsb pdb:6U04|rcsb pdb:7A08|reactome:R-HSA-427413|rcsb pdb:7CIZ|reactome:R-HSA-5250924|reactome:R-HSA-5334118|rcsb pdb:7CJ0|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-983231|rcsb pdb:7CWH|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-427359|reactome:R-HSA-427389|ensembl:ENST00000254810(transcript)|ensembl:ENST00000366813(transcript)|ensembl:ENST00000366815(transcript)|ensembl:ENST00000366816(transcript)|ensembl:ENST00000586607(transcript)|ensembl:ENST00000587560(transcript)|ensembl:ENST00000589599(transcript)|ensembl:ENST00000655399(transcript)|ensembl:ENST00000661429(transcript)|ensembl:ENST00000666609(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P84243|rcsb pdb:2L43|rcsb pdb:3ASK|rcsb pdb:3ASL|rcsb pdb:3AV2|rcsb pdb:3JVK|rcsb pdb:3MUK|rcsb pdb:3MUL|dip:DIP-40046N - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:cRqA5/IBNfIbbxAnbwLqzXip20I9606 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZ45 uniprotkb:P62805 intact:EBI-21272934|ensemblfungi:CAY68519 intact:EBI-302023|ensembl:ENSP00000244537|ensembl:ENSP00000347168|ensembl:ENSP00000350767|ensembl:ENSP00000366974|ensembl:ENSP00000366956|ensembl:ENSP00000462667|ensembl:ENSP00000367034|ensembl:ENSP00000478519|ensembl:ENSP00000478786|ensembl:ENSP00000443017|ensembl:ENSP00000462355|ensembl:ENSP00000479106|ensembl:ENSP00000479461|uniprotkb:A2VCL0|uniprotkb:P02304|uniprotkb:P02305|uniprotkb:Q6DRA9|uniprotkb:Q6FGB8|uniprotkb:Q6NWP7|ensembl:ENSP00000479794|ensembl:ENSP00000480960|ensembl:ENSP00000481343|ensembl:ENSP00000481486|ensembl:ENSP00000481507|ensembl:ENSP00000482412|ensembl:ENSP00000484789|ensembl:ENSP00000489319|ensembl:ENSP00000489567 psi-mi:c4qz45_kompg(display_long)|uniprotkb:PAS_c121_0006(locus name) psi-mi:h4_human(display_long)|uniprotkb:H4-16(gene name)|psi-mi:H4-16(display_short)|uniprotkb:H4C1(gene name)|psi-mi:H4C1(display_short)|uniprotkb:H4C11(gene name)|psi-mi:H4C11(display_short)|uniprotkb:H4C12(gene name)|psi-mi:H4C12(display_short)|uniprotkb:H4C13(gene name)|psi-mi:H4C13(display_short)|uniprotkb:H4C14(gene name)|psi-mi:H4C14(display_short)|uniprotkb:H4C15(gene name)|psi-mi:H4C15(display_short)|uniprotkb:H4C2(gene name)|psi-mi:H4C2(display_short)|uniprotkb:H4C3(gene name)|psi-mi:H4C3(display_short)|uniprotkb:H4C4(gene name)|psi-mi:H4C4(display_short)|uniprotkb:H4C5(gene name)|psi-mi:H4C5(display_short)|uniprotkb:H4C6(gene name)|psi-mi:H4C6(display_short)|uniprotkb:H4C8(gene name)|psi-mi:H4C8(display_short)|uniprotkb:H4C9(gene name)|psi-mi:H4C9(display_short)|uniprotkb:H4/A(gene name synonym)|uniprotkb:H4/B(gene name synonym)|uniprotkb:H4/C(gene name synonym)|uniprotkb:H4/D(gene name synonym)|uniprotkb:H4/E(gene name synonym)|uniprotkb:H4/G(gene name synonym)|uniprotkb:H4/H(gene name synonym)|uniprotkb:H4/I(gene name synonym)|uniprotkb:H4/J(gene name synonym)|uniprotkb:H4/K(gene name synonym)|uniprotkb:H4/M(gene name synonym)|uniprotkb:H4/N(gene name synonym)|uniprotkb:H4/O(gene name synonym)|uniprotkb:H4F2(gene name synonym)|uniprotkb:H4FA(gene name synonym)|uniprotkb:H4FB(gene name synonym)|uniprotkb:H4FC(gene name synonym)|uniprotkb:H4FD(gene name synonym)|uniprotkb:H4FE(gene name synonym)|uniprotkb:H4FG(gene name synonym)|uniprotkb:H4FH(gene name synonym)|uniprotkb:H4FI(gene name synonym)|uniprotkb:H4FJ(gene name synonym)|uniprotkb:H4FK(gene name synonym)|uniprotkb:H4FM(gene name synonym)|uniprotkb:H4FN(gene name synonym)|uniprotkb:H4FO(gene name synonym)|uniprotkb:HIST1H4A(gene name synonym)|uniprotkb:HIST1H4B(gene name synonym)|uniprotkb:HIST1H4C(gene name synonym)|uniprotkb:HIST1H4D(gene name synonym)|uniprotkb:HIST1H4E(gene name synonym)|uniprotkb:HIST1H4F(gene name synonym)|uniprotkb:HIST1H4H(gene name synonym)|uniprotkb:HIST1H4I(gene name synonym)|uniprotkb:HIST1H4J(gene name synonym)|uniprotkb:HIST1H4K(gene name synonym)|uniprotkb:HIST1H4L(gene name synonym)|uniprotkb:HIST2H4(gene name synonym)|uniprotkb:HIST2H4A(gene name synonym)|uniprotkb:HIST2H4B(gene name synonym)|uniprotkb:HIST4H4(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21272990|wwpdb:6IR9|emdb:EMD-9713|wwpdb:6J4X|emdb:EMD-0672|wwpdb:6J4Y|emdb:EMD-0673|wwpdb:6J4W|emdb:EMD-0671|wwpdb:6J51|emdb:EMD-0676|imex:IM-27000-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J51|ensemblfungi:CAY68519(transcript)|ensemblfungi:PAS_c121_0006(gene)|go:"GO:0005634"(nucleus)|go:"GO:0046872"(metal ion binding)|refseq:XP_002490799.1|interpro:IPR007808(Protein of unknown function DUF701, zinc-binding putative)|interpro:IPR038567 ensembl:ENSG00000197061(gene)|ensembl:ENSG00000276180(gene)|ensembl:ENSG00000197238(gene)|ensembl:ENSG00000276966(gene)|ensembl:ENSG00000277157(gene)|ensembl:ENSG00000270276(gene)|ensembl:ENSG00000197837(gene)|ensembl:ENSG00000270882(gene)|ensembl:ENSG00000278637(gene)|ensembl:ENSG00000273542(gene)|ensembl:ENSG00000274618(gene)|ensembl:ENSG00000278705(gene)|ensembl:ENSG00000275126(gene)|ensembl:ENSG00000158406(gene)|dip:DIP-33079N|ensembl:ENST00000244537(transcript)|ensembl:ENST00000355057(transcript)|ensembl:ENST00000358064(transcript)|ensembl:ENST00000377727(transcript)|ensembl:ENST00000377745(transcript)|ensembl:ENST00000377803(transcript)|ensembl:ENST00000539745(transcript)|ensembl:ENST00000578186(transcript)|ensembl:ENST00000579512(transcript)|ensembl:ENST00000611927(transcript)|ensembl:ENST00000612061(transcript)|ensembl:ENST00000613412(transcript)|ensembl:ENST00000614247(transcript)|ensembl:ENST00000614272(transcript)|ensembl:ENST00000615164(transcript)|ensembl:ENST00000615353(transcript)|ensembl:ENST00000617569(transcript)|ensembl:ENST00000618193(transcript)|ensembl:ENST00000618305(transcript)|ensembl:ENST00000621520(transcript)|ensembl:ENST00000634560(transcript)|ensembl:ENST00000634956(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045653"(negative regulation of megakaryocyte differentiation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0005576"(extracellular region)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001951(Histone H4)|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AYW|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3CFS|rcsb pdb:3CFV|rcsb pdb:3F9W|rcsb pdb:3F9X|rcsb pdb:3F9Y|rcsb pdb:3F9Z|rcsb pdb:3IJ1|rcsb pdb:3JPX|rcsb pdb:3NQJ|rcsb pdb:3NQU|rcsb pdb:3O36|rcsb pdb:3QBY|rcsb pdb:3QZS|rcsb pdb:3QZT|rcsb pdb:3QZV|rcsb pdb:3R45|rcsb pdb:3UVW|rcsb pdb:3UVX|rcsb pdb:3UVY|rcsb pdb:3UW9|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WA9|rcsb pdb:3WAA|rcsb pdb:3WKJ|rcsb pdb:3WTP|rcsb pdb:3X1S|rcsb pdb:3X1T|rcsb pdb:3X1U|rcsb pdb:3X1V|rcsb pdb:4GQB|rcsb pdb:4H9N|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4M38|rcsb pdb:4N3W|rcsb pdb:4N4F|rcsb pdb:4QUT|rcsb pdb:4QUU|rcsb pdb:4QYD|rcsb pdb:4U9W|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4YY6|rcsb pdb:4YYD|rcsb pdb:4YYG|rcsb pdb:4YYH|rcsb pdb:4YYI|rcsb pdb:4YYJ|rcsb pdb:4YYK|rcsb pdb:4YYM|rcsb pdb:4YYN|rcsb pdb:4Z2M|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5B40|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:5BO0|rcsb pdb:5C3I|rcsb pdb:5CPI|interpro:IPR019809|interpro:IPR035425|mint:P62805|rcsb pdb:1ZKK|rcsb pdb:2BQZ|rcsb pdb:2CV5|rcsb pdb:2IG0|rcsb pdb:2KWN|rcsb pdb:2KWO|rcsb pdb:2LVM|rcsb pdb:2QQS|rcsb pdb:2RJE|rcsb pdb:2RNY|interpro:IPR009072(Histone-fold)|rcsb pdb:2RS9|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:5GT3|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JA4|rcsb pdb:5JRG|rcsb pdb:5KDM|rcsb pdb:5TEG|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5YE3|rcsb pdb:5YE4|rcsb pdb:5Z23|rcsb pdb:5Z30|rcsb pdb:5ZBX|rcsb pdb:5ZGC|rcsb pdb:5CPJ|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:5CPK|rcsb pdb:6A5P|rcsb pdb:5FA5|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6ACP|rcsb pdb:6BUZ|rcsb pdb:6C0W|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6FML|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JOU|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6K1I|rcsb pdb:6K1J|rcsb pdb:6K1K|rcsb pdb:6KE9|rcsb pdb:6KVD|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9H|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LE9|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6M4D|rcsb pdb:5FFW|rcsb pdb:5FWE|rcsb pdb:5GSE|rcsb pdb:5GSU|rcsb pdb:5GT0|rcsb pdb:6M4G|rcsb pdb:6M4H|rcsb pdb:6MLC|rcsb pdb:6MUO|rcsb pdb:6MUP|rcsb pdb:6O1D|rcsb pdb:6R0C|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|refseq:NP_001029249.1|refseq:NP_003486.1|refseq:NP_003529.1|refseq:NP_003530.1|refseq:NP_003531.1|refseq:NP_003532.1|refseq:NP_003533.1|refseq:NP_003534.1|refseq:NP_003535.1|refseq:NP_003536.1|refseq:NP_003537.1|refseq:NP_003539.1|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6RNY|rcsb pdb:6RXS|rcsb pdb:6SE0|rcsb pdb:6SE6|rcsb pdb:6SEE|rcsb pdb:6SEF|rcsb pdb:6SEG|rcsb pdb:6T79|rcsb pdb:6T7A|rcsb pdb:6T7B|rcsb pdb:6T7C|rcsb pdb:6T7D|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6UPK|rcsb pdb:6UPL|rcsb pdb:6USJ|rcsb pdb:6V2K|rcsb pdb:6V92|rcsb pdb:6VO5|rcsb pdb:6X59|rcsb pdb:6X5A|rcsb pdb:6XJD|rcsb pdb:6Y5D|rcsb pdb:6YOV|rcsb pdb:7A08|rcsb pdb:7BWD|rcsb pdb:7BXT|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7CIZ|rcsb pdb:7CJ0|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7DBP|rcsb pdb:7JO9|rcsb pdb:7JOA|rcsb pdb:7JZV|rcsb pdb:7K5X|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LMK|rcsb pdb:7LMM|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214841|reactome:R-HSA-3214842|reactome:R-HSA-3214847|reactome:R-HSA-3214858|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-4551638|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5693565|refseq:NP_068803.1|refseq:NP_778224.1|reactome:R-HSA-5693571|reactome:R-HSA-5693607|reactome:R-HSA-606279|reactome:R-HSA-69473|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225 - - - figure legend:Figs. 1 and S5 and S6, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:RkWbUdsBYdChoYY7PNim4W09k0w644223 rogid:LZSfhrpw0PcDREEoJ1UMkBvnUfA9606 rigid:bu2fRSb5w1xmr1TmgmuuE/ZxEX0 false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R009 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800218|ensemblfungi:CAY68833 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r009_kompg(display_long)|uniprotkb:PAS_chr2-1_0223(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY68833(transcript)|ensemblfungi:PAS_chr2-1_0223(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491113.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR023580|interpro:IPR020789|interpro:IPR000268(RNA polymerases, N/8 Kd subunits)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:1ay4K0OWVYfU09LaWaEKYqDEXuk644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R0E6 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-21272943|ensemblfungi:CAY68970 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r0e6_kompg(display_long)|uniprotkb:PAS_chr2-1_0350(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:PAS_chr2-1_0350(gene)|go:"GO:0000182"(rDNA binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000776"(kinetochore)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0006342"|go:"GO:0006370"(7-methylguanosine mRNA capping)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0031934"(mating-type region heterochromatin)|go:"GO:0032044"(DSIF complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0033553"(rDNA heterochromatin)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0090262"(regulation of transcription-coupled nucleotide-excision repair)|go:"GO:2000232"(regulation of rRNA processing)|go:"GO:2001208"(negative regulation of transcription elongation by RNA polymerase I)|go:"GO:2001209"(positive regulation of transcription elongation from RNA polymerase I promoter)|ensemblfungi:CAY68970(transcript)|refseq:XP_002491250.1|rcsb pdb:5XON|interpro:IPR029040|interpro:IPR009287(Transcription initiation Spt4)|interpro:IPR022800|interpro:IPR038510 - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:ywCrJ9W9Xggw4QlYjFSer87BELk644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R1V1 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800134|ensemblfungi:CAY69475 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r1v1_kompg(display_long)|uniprotkb:PAS_chr2-2_0434(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY69475(transcript)|ensemblfungi:PAS_chr2-2_0434(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491755.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR020708|interpro:IPR006110(RNA polymerase Rpb6)|interpro:IPR012293(RNA polymerase subunit, RPB6/omega)|interpro:IPR028363|interpro:IPR036161|interpro:IPR006111(DNA-directed RNA polymerase, 14 to 18 kDa subunit)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:sOgXLbXs4iRGdaUFfb88ZVm1W98644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R273 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800178|ensemblfungi:CAY69597 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r273_kompg(display_long)|uniprotkb:PAS_chr2-2_0309(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY69597(transcript)|ensemblfungi:PAS_chr2-2_0309(gene)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0001056"(RNA polymerase III activity)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0042797"(tRNA transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002491877.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR005570(RNA polymerase, Rpb8)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:MnvasHhqga4MIKsh8kH1/bpM0wc644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R2U9 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800081|ensemblfungi:CAY69823 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r2u9_kompg(display_long)|uniprotkb:PAS_chr2-2_0104(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|ensemblfungi:CAY69823(transcript)|ensemblfungi:PAS_chr2-2_0104(gene)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000932"(P-body)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031990"(mRNA export from nucleus in response to heat stress)|go:"GO:0034402"(recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex)|go:"GO:0045948"(positive regulation of translational initiation)|rcsb pdb:6INQ|refseq:XP_002492103.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR010997(HRDC-like)|interpro:IPR006590(RNA polymerase II, Rpb4, core)|interpro:IPR005574(RNA polymerase II, Rpb4)|interpro:IPR038324|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:/017Xpkf83C3N7U8UYAXzDWDlv8644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R370 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-21272973|ensemblfungi:CAY71204 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r370_kompg(display_long)|uniprotkb:Chromatin elongation factor spt5(gene name synonym)|uniprotkb:transcription Elongation factor SPT5(gene name synonym)|uniprotkb:PAS_chr3_1136(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U interpro:IPR041973|interpro:IPR041975|interpro:IPR041976|interpro:IPR041977|interpro:IPR041978|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY71204(transcript)|ensemblfungi:PAS_chr3_1136(gene)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006397"(mRNA processing)|go:"GO:0032784"(regulation of DNA-templated transcription, elongation)|refseq:XP_002493383.1|rcsb pdb:5XON|interpro:IPR005824(KOW)|interpro:IPR005100(Supt5 repeat)|interpro:IPR036735|interpro:IPR039385|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR039659|interpro:IPR022581|interpro:IPR017071(Transcription elongation factor Spt5)|interpro:IPR008991(Translation protein SH3-like) - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:fiReSF3elv/T+GigQdEyO6vkdHQ644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R3P8 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800108|ensemblfungi:CAY70112 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r3p8_kompg(display_long)|uniprotkb:PAS_chr3_0157(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6J50|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J51|ensemblfungi:CAY70112(transcript)|ensemblfungi:PAS_chr3_0157(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005666"(RNA polymerase III complex)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006383"(transcription by RNA polymerase III)|rcsb pdb:6INQ|refseq:XP_002492363.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR014381(DNA-directed RNA polymerase, RPB5 subunit)|interpro:IPR005571(RNA polymerase, Rpb5, N-terminal)|interpro:IPR036710|interpro:IPR000783(RNA polymerase, subunit H/Rpb5 C-terminal)|interpro:IPR020608|interpro:IPR035913|interpro:IPR020609|interpro:IPR039531|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:uvHyo3JNliA/f1LdlRdTrLHAhu8644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R3Z5 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800241|ensemblfungi:CAY70274 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r3z5_kompg(display_long)|uniprotkb:PAS_chr3_0244(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY70274(transcript)|ensemblfungi:PAS_chr3_0244(gene)|go:"GO:0001055"(RNA polymerase II activity)|go:"GO:0003677"(DNA binding)|go:"GO:0003968"(RNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6INQ|refseq:XP_002492460.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR037685|interpro:IPR036603|interpro:IPR009025(DNA-directed RNA polymerase, RBP11-like)|interpro:IPR008193(DNA-directed RNA polymerase Rpb11, 13-16 kDa subunit, conserved site)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:Bcxi1i7CjZerdkNw1zlStjnDbGA644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R4Y0 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20799999|ensemblfungi:CAY70616 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r4y0_kompg(display_long)|uniprotkb:PAS_chr3_0568(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U interpro:IPR042102|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY70616(transcript)|ensemblfungi:PAS_chr3_0568(gene)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002492795.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR000722(RNA polymerase, alpha subunit)|interpro:IPR000684(RNA polymerase II, heptapeptide repeat, eukaryotic)|interpro:IPR006592(RNA polymerase, N-terminal)|interpro:IPR007080(RNA polymerase Rpb1, domain 1)|interpro:IPR007066(RNA polymerase Rpb1, domain 3)|interpro:IPR007083(RNA polymerase Rpb1, domain 4)|interpro:IPR007081(RNA polymerase Rpb1, domain 5)|interpro:IPR007075(RNA polymerase Rpb1, domain 6)|interpro:IPR007073(RNA polymerase Rpb1, domain 7)|interpro:IPR038593|interpro:IPR038120|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:/Iegq8f+rYdUcNLjKKqdngz4RxI644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R7L2 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800059|ensemblfungi:CAY71587 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r7l2_kompg(display_long)|uniprotkb:PAS_chr4_0344(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY71587(transcript)|ensemblfungi:PAS_chr4_0344(gene)|go:"GO:0000785"(chromatin)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0046983"(protein dimerization activity)|rcsb pdb:6INQ|refseq:XP_002493766.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR001514(DNA-directed RNA polymerase, 30-40 kDa subunit, conserved site)|interpro:IPR011262(DNA-directed RNA polymerase, insert)|interpro:IPR011263(DNA-directed RNA polymerase, RpoA/D/Rpb3-type)|interpro:IPR036603|interpro:IPR036643|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:aRUBPn6vT0brJH8ce/7n4CfRPV8644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:C4R9A1 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800159|ensemblfungi:CAY72176 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:c4r9a1_kompg(display_long)|uniprotkb:PAS_chr4_0906(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CAY72176(transcript)|ensemblfungi:PAS_chr4_0906(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0010590"(regulation of septum digestion after cytokinesis)|go:"GO:0097394"(telomeric repeat-containing RNA transcription by RNA polymerase II)|rcsb pdb:6INQ|refseq:XP_002494355.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR036898|interpro:IPR005576(RNA polymerase Rpb7, N-terminal)|interpro:IPR003029(S1, RNA binding)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:uE/3Z3mElfHD6zyWFofgkpflFOg644223 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:F2QMI1 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800261|ensemblfungi:CCA36628 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:f2qmi1_kompc(display_long)|uniprotkb:RPC10(gene name)|psi-mi:RPC10(display_short)|uniprotkb:PP7435_Chr1-0476(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:981350(kompc)|taxid:981350("Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CCA36628(transcript)|ensemblfungi:PP7435_CHR1-0476(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0008270"(zinc ion binding)|rcsb pdb:6INQ|rcsb pdb:5XOG|interpro:IPR006591(RNA polymerase Rbp10)|interpro:IPR029040|interpro:IPR039747|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:XNaJRCB6Mz0dez4DoFiRGfxeoZA981350 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:F2QPE6 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-20800198|ensemblfungi:CCA37274 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:f2qpe6_kompc(display_long)|uniprotkb:RPB9(gene name)|psi-mi:RPB9(display_short)|uniprotkb:PP7435_Chr1-1144(locus name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:981350(kompc)|taxid:981350("Komagataella phaffii (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|ensemblfungi:CCA37274(transcript)|ensemblfungi:PP7435_CHR1-1144(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005730"(nucleolus)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006379"(mRNA cleavage)|go:"GO:0008270"(zinc ion binding)|rcsb pdb:6INQ|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|interpro:IPR019761|interpro:IPR001529(DNA-directed RNA polymerase, M/15 kDa subunit)|interpro:IPR012164(DNA-directed RNA polymerase, subunit C11/M/9)|interpro:IPR034012|interpro:IPR001222(Zinc finger, TFIIS-type)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:K8GCq9GcWsMRVlapEcuaLTOLJfc981350 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 1 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:P04908 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-358971|uniprotkb:Q76P63|uniprotkb:P28001|ensembl:ENSP00000303373|ensembl:ENSP00000483842 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:h2a1b_human(display_long)|uniprotkb:H2AC4(gene name)|psi-mi:H2AC4(display_short)|uniprotkb:H2AC8(gene name)|psi-mi:H2AC8(display_short)|uniprotkb:H2AFA(gene name synonym)|uniprotkb:H2AFM(gene name synonym)|uniprotkb:HIST1H2AB(gene name synonym)|uniprotkb:HIST1H2AE(gene name synonym)|uniprotkb:Histone H2A.2(gene name synonym)|uniprotkb:Histone H2A/a(gene name synonym)|uniprotkb:Histone H2A/m(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U refseq:NP_003504.2|refseq:NP_066390.1|ensembl:ENSG00000277075(gene)|ensembl:ENSG00000278463(gene)|ensembl:ENST00000303910(transcript)|ensembl:ENST00000615868(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006342"|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002119(Histone H2A)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|interpro:IPR032454|interpro:IPR032458|mint:P04908|rcsb pdb:2CV5|rcsb pdb:2RVQ|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:3AYW|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WKJ|rcsb pdb:3WTP|rcsb pdb:3X1S|rcsb pdb:3X1V|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B40|rcsb pdb:5CPI|rcsb pdb:5CPJ|rcsb pdb:5CPK|rcsb pdb:5GSE|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JRG|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5Z23|rcsb pdb:5ZBX|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6ACL|rcsb pdb:6AEE|rcsb pdb:6BUZ|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IPU|rcsb pdb:6IQ4|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6KE9|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9H|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LE9|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6O1D|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6T79|rcsb pdb:6T7A|rcsb pdb:6T7B|rcsb pdb:6T7C|rcsb pdb:6T7D|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6USJ|rcsb pdb:6V92|rcsb pdb:6YOV|rcsb pdb:7BWD|rcsb pdb:7BXT|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7DBP|rcsb pdb:7K5X|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214847|reactome:R-HSA-3214858|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5689603|reactome:R-HSA-5689880|reactome:R-HSA-5689901|reactome:R-HSA-606279|reactome:R-HSA-73728|rcsb pdb:6JXD|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|dip:DIP-44197N - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:4Qno1mMYZB6FdNoojrzulWLVq849606 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:P06899 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-6150252|uniprotkb:B2R4J4|uniprotkb:O60816|ensembl:ENSP00000342886|ensembl:ENSP00000476136 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:h2b1j_human(display_long)|uniprotkb:H2BC11(gene name)|psi-mi:H2BC11(display_short)|uniprotkb:H2BFR(gene name synonym)|uniprotkb:HIST1H2BJ(gene name synonym)|uniprotkb:Histone H2B.1(gene name synonym)|uniprotkb:Histone H2B.r(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U refseq:NP_066402.2|dip:DIP-421N|ensembl:ENSG00000124635(gene)|ensembl:ENST00000339812(transcript)|ensembl:ENST00000607124(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0002227"(innate immune response in mucosa)|go:"GO:0003677"(DNA binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0010804"(negative regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:0019731"(antibacterial humoral response)|go:"GO:0031640"(killing of cells of another organism)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0050829"(defense response to Gram-negative bacterium)|go:"GO:0050830"(defense response to Gram-positive bacterium)|go:"GO:0061844"(antimicrobial humoral immune response mediated by antimicrobial peptide)|interpro:IPR000558(Histone H2B)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P06899|rcsb pdb:2RVQ|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:3AYW|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WAA|rcsb pdb:3WTP|rcsb pdb:4CAY|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5B40|rcsb pdb:5CPI|rcsb pdb:5CPJ|rcsb pdb:5CPK|rcsb pdb:5FUG|rcsb pdb:5GSE|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JRG|rcsb pdb:5VEY|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5Z23|rcsb pdb:5Z30|rcsb pdb:5ZBX|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6BUZ|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IPU|rcsb pdb:6IQ4|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JOU|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6JXD|rcsb pdb:6K1I|rcsb pdb:6K1J|rcsb pdb:6K1K|rcsb pdb:6KVD|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6O1D|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6USJ|rcsb pdb:6V2K|rcsb pdb:6YOV|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7K5X|rcsb pdb:3WA9|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214847|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5689880|reactome:R-HSA-5693565|reactome:R-HSA-5693571|reactome:R-HSA-5693607|reactome:R-HSA-606279|reactome:R-HSA-69473|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8866654|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225 - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:74GQlSjGG1Ez6Uog74VXPLryKBc9606 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:P84243 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-120658|uniprotkb:P06351|uniprotkb:P33155|uniprotkb:Q5VV55|uniprotkb:Q5VV56|uniprotkb:Q66I33|uniprotkb:Q9V3W4|ensembl:ENSP00000254810|ensembl:ENSP00000355778|ensembl:ENSP00000355780|ensembl:ENSP00000355781|ensembl:ENSP00000465813|ensembl:ENSP00000466020|ensembl:ENSP00000468714|ensembl:ENSP00000499275|ensembl:ENSP00000499385|ensembl:ENSP00000499800 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:h33_human(display_long)|uniprotkb:H3-3A(gene name)|psi-mi:H3-3A(display_short)|uniprotkb:H3-3B(gene name)|psi-mi:H3-3B(display_short)|uniprotkb:H3.3A(gene name synonym)|uniprotkb:H3.3B(gene name synonym)|uniprotkb:H3F3(gene name synonym)|uniprotkb:H3F3A(gene name synonym)|uniprotkb:H3F3B(gene name synonym)|uniprotkb:PP781(orf name) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U refseq:NP_002098.1|refseq:NP_005315.1|rcsb pdb:4H9N|rcsb pdb:3QL9|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:3QLA|rcsb pdb:3QLC|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4L58|rcsb pdb:4N4I|rcsb pdb:3WTP|rcsb pdb:4O62|rcsb pdb:4QQ4|rcsb pdb:4TMP|rcsb pdb:4GNE|rcsb pdb:4GNF|rcsb pdb:4U7T|rcsb pdb:4GNG|rcsb pdb:4W5A|rcsb pdb:4GU0|rcsb pdb:4GUR|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:4GUS|rcsb pdb:4GY5|rcsb pdb:5DWQ|rcsb pdb:5DX0|rcsb pdb:5JA4|rcsb pdb:5JJY|ensembl:ENSG00000132475(gene)|ensembl:ENSG00000163041(gene)|rcsb pdb:5JLB|rcsb pdb:5KDM|rcsb pdb:5X7X|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6HGT|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6J9J|rcsb pdb:6PZV|rcsb pdb:6QXZ|rcsb pdb:6R0C|rcsb pdb:6RNY|rcsb pdb:6U04|rcsb pdb:7A08|reactome:R-HSA-427413|rcsb pdb:7CIZ|reactome:R-HSA-5250924|reactome:R-HSA-5334118|rcsb pdb:7CJ0|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-983231|rcsb pdb:7CWH|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-427359|reactome:R-HSA-427389|ensembl:ENST00000254810(transcript)|ensembl:ENST00000366813(transcript)|ensembl:ENST00000366815(transcript)|ensembl:ENST00000366816(transcript)|ensembl:ENST00000586607(transcript)|ensembl:ENST00000587560(transcript)|ensembl:ENST00000589599(transcript)|ensembl:ENST00000655399(transcript)|ensembl:ENST00000661429(transcript)|ensembl:ENST00000666609(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P84243|rcsb pdb:2L43|rcsb pdb:3ASK|rcsb pdb:3ASL|rcsb pdb:3AV2|rcsb pdb:3JVK|rcsb pdb:3MUK|rcsb pdb:3MUL|dip:DIP-40046N - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:cRqA5/IBNfIbbxAnbwLqzXip20I9606 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination) uniprotkb:C4QZQ7 uniprotkb:P62805 intact:EBI-20800027|ensemblfungi:CAY68731 intact:EBI-302023|ensembl:ENSP00000244537|ensembl:ENSP00000347168|ensembl:ENSP00000350767|ensembl:ENSP00000366974|ensembl:ENSP00000366956|ensembl:ENSP00000462667|ensembl:ENSP00000367034|ensembl:ENSP00000478519|ensembl:ENSP00000478786|ensembl:ENSP00000443017|ensembl:ENSP00000462355|ensembl:ENSP00000479106|ensembl:ENSP00000479461|uniprotkb:A2VCL0|uniprotkb:P02304|uniprotkb:P02305|uniprotkb:Q6DRA9|uniprotkb:Q6FGB8|uniprotkb:Q6NWP7|ensembl:ENSP00000479794|ensembl:ENSP00000480960|ensembl:ENSP00000481343|ensembl:ENSP00000481486|ensembl:ENSP00000481507|ensembl:ENSP00000482412|ensembl:ENSP00000484789|ensembl:ENSP00000489319|ensembl:ENSP00000489567 psi-mi:c4qzq7_kompg(display_long)|uniprotkb:PAS_chr2-1_0125(locus name) psi-mi:h4_human(display_long)|uniprotkb:H4-16(gene name)|psi-mi:H4-16(display_short)|uniprotkb:H4C1(gene name)|psi-mi:H4C1(display_short)|uniprotkb:H4C11(gene name)|psi-mi:H4C11(display_short)|uniprotkb:H4C12(gene name)|psi-mi:H4C12(display_short)|uniprotkb:H4C13(gene name)|psi-mi:H4C13(display_short)|uniprotkb:H4C14(gene name)|psi-mi:H4C14(display_short)|uniprotkb:H4C15(gene name)|psi-mi:H4C15(display_short)|uniprotkb:H4C2(gene name)|psi-mi:H4C2(display_short)|uniprotkb:H4C3(gene name)|psi-mi:H4C3(display_short)|uniprotkb:H4C4(gene name)|psi-mi:H4C4(display_short)|uniprotkb:H4C5(gene name)|psi-mi:H4C5(display_short)|uniprotkb:H4C6(gene name)|psi-mi:H4C6(display_short)|uniprotkb:H4C8(gene name)|psi-mi:H4C8(display_short)|uniprotkb:H4C9(gene name)|psi-mi:H4C9(display_short)|uniprotkb:H4/A(gene name synonym)|uniprotkb:H4/B(gene name synonym)|uniprotkb:H4/C(gene name synonym)|uniprotkb:H4/D(gene name synonym)|uniprotkb:H4/E(gene name synonym)|uniprotkb:H4/G(gene name synonym)|uniprotkb:H4/H(gene name synonym)|uniprotkb:H4/I(gene name synonym)|uniprotkb:H4/J(gene name synonym)|uniprotkb:H4/K(gene name synonym)|uniprotkb:H4/M(gene name synonym)|uniprotkb:H4/N(gene name synonym)|uniprotkb:H4/O(gene name synonym)|uniprotkb:H4F2(gene name synonym)|uniprotkb:H4FA(gene name synonym)|uniprotkb:H4FB(gene name synonym)|uniprotkb:H4FC(gene name synonym)|uniprotkb:H4FD(gene name synonym)|uniprotkb:H4FE(gene name synonym)|uniprotkb:H4FG(gene name synonym)|uniprotkb:H4FH(gene name synonym)|uniprotkb:H4FI(gene name synonym)|uniprotkb:H4FJ(gene name synonym)|uniprotkb:H4FK(gene name synonym)|uniprotkb:H4FM(gene name synonym)|uniprotkb:H4FN(gene name synonym)|uniprotkb:H4FO(gene name synonym)|uniprotkb:HIST1H4A(gene name synonym)|uniprotkb:HIST1H4B(gene name synonym)|uniprotkb:HIST1H4C(gene name synonym)|uniprotkb:HIST1H4D(gene name synonym)|uniprotkb:HIST1H4E(gene name synonym)|uniprotkb:HIST1H4F(gene name synonym)|uniprotkb:HIST1H4H(gene name synonym)|uniprotkb:HIST1H4I(gene name synonym)|uniprotkb:HIST1H4J(gene name synonym)|uniprotkb:HIST1H4K(gene name synonym)|uniprotkb:HIST1H4L(gene name synonym)|uniprotkb:HIST2H4(gene name synonym)|uniprotkb:HIST2H4A(gene name synonym)|uniprotkb:HIST2H4B(gene name synonym)|uniprotkb:HIST4H4(gene name synonym) psi-mi:"MI:0410"(3D electron microscopy) Ehara et al. (2019) imex:IM-27000|pubmed:30733384 taxid:644223(picpg)|taxid:644223("Komagataella pastoris (strain GS115 / ATCC 20864)") taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0465"(DIP) intact:EBI-21273043|wwpdb:6J4Z|emdb:EMD-0674|wwpdb:6J50|emdb:EMD-0675|imex:IM-27000-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|ensemblfungi:CAY68731(transcript)|ensemblfungi:PAS_chr2-1_0125(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0005665"(RNA polymerase II, core complex)|go:"GO:0005721"(pericentric heterochromatin)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0032549"(ribonucleoside binding)|go:"GO:0046872"(metal ion binding)|rcsb pdb:6INQ|refseq:XP_002491011.1|rcsb pdb:5X4Z|rcsb pdb:5X50|rcsb pdb:5X51|rcsb pdb:5XOG|rcsb pdb:5XON|interpro:IPR015712(DNA-directed RNA polymerase, subunit 2)|interpro:IPR007120(DNA-directed RNA polymerase, subunit 2, domain 6)|interpro:IPR037033|interpro:IPR007121(RNA polymerase, beta subunit, conserved site)|interpro:IPR007644(RNA polymerase, beta subunit, protrusion)|interpro:IPR007642(RNA polymerase Rpb2, domain 2)|interpro:IPR037034|interpro:IPR007645(RNA polymerase Rpb2, domain 3)|interpro:IPR007646(RNA polymerase Rpb2, domain 4)|interpro:IPR007647(RNA polymerase Rpb2, domain 5)|interpro:IPR007641(RNA polymerase Rpb2, domain 7)|interpro:IPR014724(RNA polymerase Rpb2, OB-fold)|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U ensembl:ENSG00000197061(gene)|ensembl:ENSG00000276180(gene)|ensembl:ENSG00000197238(gene)|ensembl:ENSG00000276966(gene)|ensembl:ENSG00000277157(gene)|ensembl:ENSG00000270276(gene)|ensembl:ENSG00000197837(gene)|ensembl:ENSG00000270882(gene)|ensembl:ENSG00000278637(gene)|ensembl:ENSG00000273542(gene)|ensembl:ENSG00000274618(gene)|ensembl:ENSG00000278705(gene)|ensembl:ENSG00000275126(gene)|ensembl:ENSG00000158406(gene)|dip:DIP-33079N|ensembl:ENST00000244537(transcript)|ensembl:ENST00000355057(transcript)|ensembl:ENST00000358064(transcript)|ensembl:ENST00000377727(transcript)|ensembl:ENST00000377745(transcript)|ensembl:ENST00000377803(transcript)|ensembl:ENST00000539745(transcript)|ensembl:ENST00000578186(transcript)|ensembl:ENST00000579512(transcript)|ensembl:ENST00000611927(transcript)|ensembl:ENST00000612061(transcript)|ensembl:ENST00000613412(transcript)|ensembl:ENST00000614247(transcript)|ensembl:ENST00000614272(transcript)|ensembl:ENST00000615164(transcript)|ensembl:ENST00000615353(transcript)|ensembl:ENST00000617569(transcript)|ensembl:ENST00000618193(transcript)|ensembl:ENST00000618305(transcript)|ensembl:ENST00000621520(transcript)|ensembl:ENST00000634560(transcript)|ensembl:ENST00000634956(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045653"(negative regulation of megakaryocyte differentiation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0005576"(extracellular region)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001951(Histone H4)|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AYW|rcsb pdb:3AZJ|rcsb pdb:3AZK|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3CFS|rcsb pdb:3CFV|rcsb pdb:3F9W|rcsb pdb:3F9X|rcsb pdb:3F9Y|rcsb pdb:3F9Z|rcsb pdb:3IJ1|rcsb pdb:3JPX|rcsb pdb:3NQJ|rcsb pdb:3NQU|rcsb pdb:3O36|rcsb pdb:3QBY|rcsb pdb:3QZS|rcsb pdb:3QZT|rcsb pdb:3QZV|rcsb pdb:3R45|rcsb pdb:3UVW|rcsb pdb:3UVX|rcsb pdb:3UVY|rcsb pdb:3UW9|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WA9|rcsb pdb:3WAA|rcsb pdb:3WKJ|rcsb pdb:3WTP|rcsb pdb:3X1S|rcsb pdb:3X1T|rcsb pdb:3X1U|rcsb pdb:3X1V|rcsb pdb:4GQB|rcsb pdb:4H9N|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4M38|rcsb pdb:4N3W|rcsb pdb:4N4F|rcsb pdb:4QUT|rcsb pdb:4QUU|rcsb pdb:4QYD|rcsb pdb:4U9W|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4YY6|rcsb pdb:4YYD|rcsb pdb:4YYG|rcsb pdb:4YYH|rcsb pdb:4YYI|rcsb pdb:4YYJ|rcsb pdb:4YYK|rcsb pdb:4YYM|rcsb pdb:4YYN|rcsb pdb:4Z2M|rcsb pdb:4Z5T|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5AY8|rcsb pdb:5B0Y|rcsb pdb:5B0Z|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B2J|rcsb pdb:5B31|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5B40|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:5BO0|rcsb pdb:5C3I|rcsb pdb:5CPI|interpro:IPR019809|interpro:IPR035425|mint:P62805|rcsb pdb:1ZKK|rcsb pdb:2BQZ|rcsb pdb:2CV5|rcsb pdb:2IG0|rcsb pdb:2KWN|rcsb pdb:2KWO|rcsb pdb:2LVM|rcsb pdb:2QQS|rcsb pdb:2RJE|rcsb pdb:2RNY|interpro:IPR009072(Histone-fold)|rcsb pdb:2RS9|rcsb pdb:3A6N|rcsb pdb:3AFA|rcsb pdb:3AN2|rcsb pdb:3AV1|rcsb pdb:3AV2|rcsb pdb:5GT3|rcsb pdb:5GTC|rcsb pdb:5GXQ|rcsb pdb:5JA4|rcsb pdb:5JRG|rcsb pdb:5KDM|rcsb pdb:5TEG|rcsb pdb:5X7X|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5YE3|rcsb pdb:5YE4|rcsb pdb:5Z23|rcsb pdb:5Z30|rcsb pdb:5ZBX|rcsb pdb:5ZGC|rcsb pdb:5CPJ|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:5CPK|rcsb pdb:6A5P|rcsb pdb:5FA5|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6ACP|rcsb pdb:6BUZ|rcsb pdb:6C0W|rcsb pdb:6E0C|rcsb pdb:6E0P|rcsb pdb:6FML|rcsb pdb:6HKT|rcsb pdb:6HTS|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6JOU|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6K1I|rcsb pdb:6K1J|rcsb pdb:6K1K|rcsb pdb:6KE9|rcsb pdb:6KVD|rcsb pdb:6KXV|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9H|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LE9|rcsb pdb:6LER|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6M4D|rcsb pdb:5FFW|rcsb pdb:5FWE|rcsb pdb:5GSE|rcsb pdb:5GSU|rcsb pdb:5GT0|rcsb pdb:6M4G|rcsb pdb:6M4H|rcsb pdb:6MLC|rcsb pdb:6MUO|rcsb pdb:6MUP|rcsb pdb:6O1D|rcsb pdb:6R0C|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|refseq:NP_001029249.1|refseq:NP_003486.1|refseq:NP_003529.1|refseq:NP_003530.1|refseq:NP_003531.1|refseq:NP_003532.1|refseq:NP_003533.1|refseq:NP_003534.1|refseq:NP_003535.1|refseq:NP_003536.1|refseq:NP_003537.1|refseq:NP_003539.1|rcsb pdb:6R92|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6RNY|rcsb pdb:6RXS|rcsb pdb:6SE0|rcsb pdb:6SE6|rcsb pdb:6SEE|rcsb pdb:6SEF|rcsb pdb:6SEG|rcsb pdb:6T79|rcsb pdb:6T7A|rcsb pdb:6T7B|rcsb pdb:6T7C|rcsb pdb:6T7D|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6UPK|rcsb pdb:6UPL|rcsb pdb:6USJ|rcsb pdb:6V2K|rcsb pdb:6V92|rcsb pdb:6VO5|rcsb pdb:6X59|rcsb pdb:6X5A|rcsb pdb:6XJD|rcsb pdb:6Y5D|rcsb pdb:6YOV|rcsb pdb:7A08|rcsb pdb:7BWD|rcsb pdb:7BXT|rcsb pdb:7BY0|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:7CCR|rcsb pdb:7CIZ|rcsb pdb:7CJ0|rcsb pdb:7D1Z|rcsb pdb:7D20|rcsb pdb:7DBP|rcsb pdb:7JO9|rcsb pdb:7JOA|rcsb pdb:7JZV|rcsb pdb:7K5X|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7LMK|rcsb pdb:7LMM|rcsb pdb:7LYC|reactome:R-HSA-110328|reactome:R-HSA-110329|reactome:R-HSA-110330|reactome:R-HSA-110331|reactome:R-HSA-1221632|reactome:R-HSA-171306|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-2559586|reactome:R-HSA-3214815|reactome:R-HSA-3214841|reactome:R-HSA-3214842|reactome:R-HSA-3214847|reactome:R-HSA-3214858|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-4551638|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-5693565|refseq:NP_068803.1|refseq:NP_778224.1|reactome:R-HSA-5693571|reactome:R-HSA-5693607|reactome:R-HSA-606279|reactome:R-HSA-69473|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225 - - - figure legend:Figs. S12, Table S1 and S2|comment:Identifier F2QTN1 in PDB accession code 6J4W has been changed to C4R009 to be consistent with the rest of the PDB accession codes and since they code for the same protein.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/02/14 2019/03/15 rogid:gcT/MsMEB3P8v3j3Pppq08HpzZU644223 rogid:LZSfhrpw0PcDREEoJ1UMkBvnUfA9606 rigid:0fuUi+4L46ky/RrQzst5xPzLNQo false - - 1 2 psi-mi:"MI:2287"(identification by structure determination) psi-mi:"MI:2287"(identification by structure determination)