#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q7Z2Z2 uniprotkb:Q9Y3A5 intact:EBI-2870376|uniprotkb:B7Z6I0|uniprotkb:A6NKY5|uniprotkb:Q9H8Z6|ensembl:ENSP00000268206 intact:EBI-1046471|ensembl:ENSP00000246868|uniprotkb:Q96FX0|uniprotkb:Q9NV53|uniprotkb:A8K0P4 psi-mi:efl1_human(display_long)|uniprotkb:EFL1(gene name)|psi-mi:EFL1(display_short)|uniprotkb:EFTUD1(gene name synonym)|uniprotkb:Elongation factor Tu GTP-binding domain-containing protein 1(gene name synonym)|uniprotkb:Elongation factor-like 1(gene name synonym)|uniprotkb:FAM42A(gene name synonym)|uniprotkb:Protein FAM42A(gene name synonym) psi-mi:sbds_human(display_long)|uniprotkb:Shwachman-Bodian-Diamond syndrome protein(gene name synonym)|uniprotkb:SBDS(gene name)|psi-mi:SBDS(display_short)|uniprotkb:CGI-97(orf name) psi-mi:"MI:0053"(fluorescence polarization spectroscopy) Gijsbers et al. (2018) pubmed:30545121|imex:IM-27139 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-21463457|imex:IM-27139-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035700.1|refseq:NP_078856.4|refseq:NP_001309774.1|ensembl:ENSG00000140598(gene)|ensembl:ENST00000268206(transcript)|go:"GO:0003746"(translation elongation factor activity)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0043022"(ribosome binding)|go:"GO:0046039"(GTP metabolic process)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR020568|interpro:IPR027417|interpro:IPR035647|interpro:IPR041095|rcsb pdb:5ANB|rcsb pdb:5ANC ensembl:ENSG00000126524(gene)|ensembl:ENST00000246868(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0001833"(inner cell mass cell proliferation)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0008017"(microtubule binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030282"(bone mineralization)|go:"GO:0030595"(leukocyte chemotaxis)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0043022"(ribosome binding)|go:"GO:0048539"(bone marrow development)|interpro:IPR002140(Shwachman-Bodian-Diamond syndrome related)|interpro:IPR018023|interpro:IPR018978|interpro:IPR019783|interpro:IPR036786|interpro:IPR037188|interpro:IPR039100|rcsb pdb:2KDO|rcsb pdb:2L9N|rcsb pdb:5AN9|rcsb pdb:5ANB|rcsb pdb:5ANC|rcsb pdb:6QKL|go:"GO:0007052"(mitotic spindle organization)|refseq:NP_057122.2 - - - figure legend:Table 1, Figure 1, 2|comment:"A two distinct binding sites model with positive cooperativity best describes the interaction [Kd1-Domain 1 (residues 1-94); Kd2 - Domain 2 (residues 94-175): Kd1 (µM) = 5.4; Kd2 (µM) = 0.4]; Hill coefficient -1.8. Mutations were tested on full length construct."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) kd:5.4x10^-6 ~1.0(molar)|kd:0.4x10^-6 ~0.04(molar) 2019/07/03 2019/07/03 rogid:nrmPQn9cjI/pwEEAxZwpLWTPe149606 rogid:msVVYApBFrilDAGn8MafoJVhxsU9606 rigid:0TJY+uazbalQI/y1uZ3AkBnhqV4 false his tag:c-c mutation decreasing interaction strength:19-19|mutation decreasing interaction strength:67-67|fiash label:c-c|mutation decreasing interaction strength:126-126(rs113993995)|mutation disrupting interaction strength:143-143|mutation decreasing interaction strength:167-167|mutation decreasing interaction strength:175-175|mutation disrupting interaction strength:212-212(rs79344818)|binding-associated region:94-250|binding-associated region:1-174|binding-associated region:1-94|binding-associated region:94-175|xpress tag:n-n|his tag:n-n - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53893 uniprotkb:Q07953 intact:EBI-28980|uniprotkb:D6W119|ensemblfungi:YNL163C intact:EBI-27124|uniprotkb:D6VY24|ensemblfungi:YLR022C psi-mi:ria1_yeast(display_long)|uniprotkb:YNL163C(locus name)|uniprotkb:N1718(orf name)|uniprotkb:EFL1(gene name synonym)|uniprotkb:Elongation factor-like 1(gene name synonym)|uniprotkb:EF-2-like GTPase(gene name synonym)|uniprotkb:RIA1(gene name)|psi-mi:RIA1(display_short) psi-mi:sdo1_yeast(display_long)|uniprotkb:YLR022C(locus name)|uniprotkb:SDO1(gene name)|psi-mi:SDO1(display_short) psi-mi:"MI:0826"(x ray scattering) Gijsbers et al. (2018) pubmed:30545121|imex:IM-27139 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-21463693|imex:IM-27139-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014236.1|sgd:S000005107|dip:DIP-2553N|mint:P53893|ensemblfungi:YNL163C(gene)|ensemblfungi:YNL163C_mRNA(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0043022"(ribosome binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR027417|interpro:IPR035647|interpro:IPR041095 refseq:NP_013122.1|sgd:S000004012|interpro:IPR018978|interpro:IPR018023|interpro:IPR019783|interpro:IPR002140(Shwachman-Bodian-Diamond syndrome related)|mint:Q07953|interpro:IPR036786|interpro:IPR037188|interpro:IPR039100|ensemblfungi:YLR022C(gene)|ensemblfungi:YLR022C_mRNA(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0042256"(mature ribosome assembly) - - - figure legend:Figures 3, 4; Supplementary tables 1, 2|comment:"Small Angle Biological Data Bank accession code: SASDET8"|3d-resolution:"Resolution (Å) - 38"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2019/07/03 2019/07/03 rogid:f42pOofRKcjr4zkN4Ifma9+JAVg559292 rogid:hneEs5QCkMZ63vvBEHQArADKpOw559292 rigid:+vcnHzLVPsHCcJ5pxuJ2U6tCQM0 false - - 1 1 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53893 uniprotkb:Q07953 intact:EBI-28980|uniprotkb:D6W119|ensemblfungi:YNL163C intact:EBI-27124|uniprotkb:D6VY24|ensemblfungi:YLR022C psi-mi:ria1_yeast(display_long)|uniprotkb:YNL163C(locus name)|uniprotkb:N1718(orf name)|uniprotkb:EFL1(gene name synonym)|uniprotkb:Elongation factor-like 1(gene name synonym)|uniprotkb:EF-2-like GTPase(gene name synonym)|uniprotkb:RIA1(gene name)|psi-mi:RIA1(display_short) psi-mi:sdo1_yeast(display_long)|uniprotkb:YLR022C(locus name)|uniprotkb:SDO1(gene name)|psi-mi:SDO1(display_short) psi-mi:"MI:0018"(two hybrid) Gijsbers et al. (2018) pubmed:30545121|imex:IM-27139 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-21916392|imex:IM-27139-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014236.1|sgd:S000005107|dip:DIP-2553N|mint:P53893|ensemblfungi:YNL163C(gene)|ensemblfungi:YNL163C_mRNA(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0043022"(ribosome binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000640(Translation elongation factor EFG/EF2, C-terminal)|interpro:IPR000795(Protein synthesis factor, GTP-binding)|interpro:IPR004161(Translation elongation factor EFTu/EF1A, domain 2)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR027417|interpro:IPR035647|interpro:IPR041095 refseq:NP_013122.1|sgd:S000004012|interpro:IPR018978|interpro:IPR018023|interpro:IPR019783|interpro:IPR002140(Shwachman-Bodian-Diamond syndrome related)|mint:Q07953|interpro:IPR036786|interpro:IPR037188|interpro:IPR039100|ensemblfungi:YLR022C(gene)|ensemblfungi:YLR022C_mRNA(transcript)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0042256"(mature ribosome assembly) - - - figure legend:Supplemental figure 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2019/07/03 2019/07/15 rogid:f42pOofRKcjr4zkN4Ifma9+JAVg559292 rogid:hneEs5QCkMZ63vvBEHQArADKpOw559292 rigid:+vcnHzLVPsHCcJ5pxuJ2U6tCQM0 false sufficient binding region:?-? sufficient binding region:94-250("G3DSA:3.30.70.240") - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)