#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9NVV9 uniprotkb:Q9NUQ8 intact:EBI-741515|uniprotkb:Q53FQ1|uniprotkb:Q6IA99|ensembl:ENSP00000254250|uniprotkb:A6NCB6|uniprotkb:D3DSY5|uniprotkb:H9KV49 intact:EBI-717672|uniprotkb:Q86UA2|uniprotkb:Q8NAN1|uniprotkb:Q96GS8|uniprotkb:Q9H7A8|uniprotkb:A8K241|ensembl:ENSP00000411471 psi-mi:thap1_human(display_long)|uniprotkb:THAP1(gene name)|psi-mi:THAP1(display_short) psi-mi:abcf3_human(display_long)|uniprotkb:ABCF3(gene name)|psi-mi:ABCF3(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463877 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060575.1|ensembl:ENSG00000131931(gene)|ensembl:ENST00000254250(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001650"(fibrillar center)|go:"GO:0001935"(endothelial cell proliferation)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016605"(PML body)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR006612(Zinc finger, C2CH-type)|interpro:IPR026516|interpro:IPR038441|mint:Q9NVV9|rcsb pdb:2JTG|rcsb pdb:2KO0|rcsb pdb:2L1G|refseq:NP_945354.1|entrezgene/locuslink:55145(identity) refseq:NP_060828.2|ensembl:ENSG00000161204(gene)|ensembl:ENST00000429586(transcript)|interpro:IPR003593(AAA+ ATPase, core)|go:"GO:0005524"(ATP binding)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|go:"GO:0016020"(membrane)|mint:Q9NUQ8|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0045296"(cadherin binding)|go:"GO:0051607"(defense response to virus)|interpro:IPR003439(ABC transporter-like)|entrezgene/locuslink:55324(identity) intact:EBI-16432406(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/KO90pu5tBnIVq9SMx1JYPXFCEQ9606 rogid:lCleN3/TzwUbPMZzkKRJzNygge89606 rigid:z3DCG+LS3ZkLK7CT5jMtr1cjZUE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z645 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16432404 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z645_human(display_long)|uniprotkb:ABCF3(gene name)|psi-mi:ABCF3(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463861 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0005524"(ATP binding)|interpro:IPR003439(ABC transporter-like)|interpro:IPR027417|entrezgene/locuslink:55324(identity) intact:EBI-16429865(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:LUXhV0mfHbsf8mpOg/NiZs9wjgY9606 rigid:fBvZehgUFGbuAJOfeOCPumeHL2k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61289 uniprotkb:Q9NUQ8 intact:EBI-355546|uniprotkb:O35563|uniprotkb:P97373|uniprotkb:Q12920|uniprotkb:Q13172|uniprotkb:Q9BQD9|uniprotkb:A8K9A3|ensembl:ENSP00000466794 intact:EBI-717672|uniprotkb:Q86UA2|uniprotkb:Q8NAN1|uniprotkb:Q96GS8|uniprotkb:Q9H7A8|uniprotkb:A8K241|ensembl:ENSP00000411471 psi-mi:psme3_human(display_long)|uniprotkb:PSME3(gene name)|psi-mi:PSME3(display_short)|uniprotkb:Proteasome activator 28 subunit gamma(gene name synonym)|uniprotkb:Activator of multicatalytic protease subunit 3(gene name synonym)|uniprotkb:11S regulator complex subunit gamma(gene name synonym)|uniprotkb:Ki nuclear autoantigen(gene name synonym) psi-mi:abcf3_human(display_long)|uniprotkb:ABCF3(gene name)|psi-mi:ABCF3(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463909 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005780.2|refseq:NP_789839.1|ensembl:ENSG00000131467(gene)|ensembl:ENST00000590720(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0002039"(p53 binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0007049"(cell cycle)|go:"GO:0008537"(proteasome activator complex)|go:"GO:0010950"(positive regulation of endopeptidase activity)|go:"GO:0016020"(membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0061133"(endopeptidase activator activity)|go:"GO:0061136"(regulation of proteasomal protein catabolic process)|go:"GO:0097371"(MDM2/MDM4 family protein binding)|go:"GO:2000045"(regulation of G1/S transition of mitotic cell cycle)|go:"GO:2001237"(negative regulation of extrinsic apoptotic signaling pathway)|interpro:IPR003185(Proteasome activator pa28, REG alpha subunit)|interpro:IPR003186(Proteasome activator pa28, REG beta subunit)|interpro:IPR009077(Proteasome activator pa28, REG alpha/beta subunit)|interpro:IPR036252|interpro:IPR036996|interpro:IPR036997|mint:P61289|reactome:R-HSA-1169091|reactome:R-HSA-1234176|reactome:R-HSA-1236974|reactome:R-HSA-1236978|reactome:R-HSA-174084|reactome:R-HSA-174113|reactome:R-HSA-174154|reactome:R-HSA-174178|reactome:R-HSA-174184|reactome:R-HSA-180534|reactome:R-HSA-180585|reactome:R-HSA-187577|reactome:R-HSA-195253|reactome:R-HSA-202424|reactome:R-HSA-211733|reactome:R-HSA-2467813|reactome:R-HSA-2871837|reactome:R-HSA-349425|reactome:R-HSA-350562|reactome:R-HSA-382556|reactome:R-HSA-450408|reactome:R-HSA-4608870|reactome:R-HSA-4641257|reactome:R-HSA-4641258|reactome:R-HSA-5358346|reactome:R-HSA-5362768|reactome:R-HSA-5607761|reactome:R-HSA-5607764|reactome:R-HSA-5610780|reactome:R-HSA-5610783|reactome:R-HSA-5610785|reactome:R-HSA-5632684|reactome:R-HSA-5658442|reactome:R-HSA-5668541|reactome:R-HSA-5676590|reactome:R-HSA-5678895|reactome:R-HSA-5687128|reactome:R-HSA-5689603|reactome:R-HSA-5689880|reactome:R-HSA-68827|reactome:R-HSA-68949|reactome:R-HSA-69017|reactome:R-HSA-69481|reactome:R-HSA-69601|reactome:R-HSA-75815|reactome:R-HSA-8852276|reactome:R-HSA-8854050|reactome:R-HSA-8932339|reactome:R-HSA-8939236|reactome:R-HSA-8939902|reactome:R-HSA-8941858|reactome:R-HSA-8948751|reactome:R-HSA-8951664|reactome:R-HSA-9010553|reactome:R-HSA-9020702|reactome:R-HSA-9604323|reactome:R-HSA-983168|entrezgene/locuslink:10197(identity) refseq:NP_060828.2|ensembl:ENSG00000161204(gene)|ensembl:ENST00000429586(transcript)|interpro:IPR003593(AAA+ ATPase, core)|go:"GO:0005524"(ATP binding)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|go:"GO:0016020"(membrane)|mint:Q9NUQ8|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0045296"(cadherin binding)|go:"GO:0051607"(defense response to virus)|interpro:IPR003439(ABC transporter-like)|entrezgene/locuslink:55324(identity) intact:EBI-16434200(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:6EQY2Kj3Juf++m4eBDzPWMgbC2k9606 rogid:lCleN3/TzwUbPMZzkKRJzNygge89606 rigid:UAIzPgFd55gU0U/qzKLjthwbCrc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:Q9NUQ8 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-717672|uniprotkb:Q86UA2|uniprotkb:Q8NAN1|uniprotkb:Q96GS8|uniprotkb:Q9H7A8|uniprotkb:A8K241|ensembl:ENSP00000411471 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:abcf3_human(display_long)|uniprotkb:ABCF3(gene name)|psi-mi:ABCF3(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463925 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) refseq:NP_060828.2|ensembl:ENSG00000161204(gene)|ensembl:ENST00000429586(transcript)|interpro:IPR003593(AAA+ ATPase, core)|go:"GO:0005524"(ATP binding)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|go:"GO:0016020"(membrane)|mint:Q9NUQ8|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0045296"(cadherin binding)|go:"GO:0051607"(defense response to virus)|interpro:IPR003439(ABC transporter-like)|entrezgene/locuslink:55324(identity) intact:EBI-16435052(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:lCleN3/TzwUbPMZzkKRJzNygge89606 rigid:H84lLCCKKriRrGaEaXl3Rgy5Y8A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:Q8NC06-3 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-12811089|ensembl:ENSP00000405969|ensembl:ENSP00000465484|ensembl:ENSP00000465610 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:q8nc06-3(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463941 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) ensembl:ENSG00000181513(gene)|ensembl:ENST00000431281(transcript)|ensembl:ENST00000586346(transcript)|ensembl:ENST00000591859(transcript)|intact:EBI-11288411(isoform-parent)|uniprotkb:Q8NC06-3(isoform-parent)|uniprotkb:Q8NC06(isoform-parent)|entrezgene/locuslink:79777(identity) intact:EBI-16431309(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:3B+wNzSVplS3qK5wXZj4EdiPcHU9606 rigid:a1jKG0mAeoqOuB6wRWdfZfGkWyY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:A0A0S2Z5W7 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-16439276 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:a0a0s2z5w7_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463957 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0016021"(integral component of membrane)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|refseq:XP_006722148.1|interpro:IPR035984|entrezgene/locuslink:79777(identity) intact:EBI-16431309(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:HNnpsSnhfzjAoJRLrRJcCTSb45o9606 rigid:kuBqfD3GDDtoLp2m6E9muMgj7qQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:Q8NC06 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-11288411|uniprotkb:D3DX64|uniprotkb:Q8IUT1|uniprotkb:Q9H8Q4|ensembl:ENSP00000366154|ensembl:ENSP00000482750|intact:EBI-16463973 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:acbd4_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463976 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) refseq:NP_001129177.1|refseq:NP_001129178.1|refseq:NP_001129179.1|refseq:NP_078998.1|refseq:NP_001308281.1|refseq:NP_001308282.1|refseq:XP_016880577.1|refseq:XP_016880580.1|refseq:XP_016880581.1|ensembl:ENSG00000181513(gene)|ensembl:ENST00000376955(transcript)|ensembl:ENST00000619916(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0008289"(lipid binding)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|interpro:IPR035984|rcsb pdb:2WH5|reactome:R-HSA-390918|entrezgene/locuslink:79777(identity) intact:EBI-16431309(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:GtdCbchDgfXEHVgEUU7JnVpA7DQ9606 rigid:pMWfy772sh+KNDjkDk/vu8Uopmw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HAQ2 uniprotkb:Q8NC06-3 intact:EBI-8472129|intact:MINT-8417679|uniprotkb:Q9H8A4|uniprotkb:Q86Z28|ensembl:ENSP00000265529|ensembl:ENSP00000391100|ensembl:ENSP00000507186 intact:EBI-12811089|ensembl:ENSP00000405969|ensembl:ENSP00000465484|ensembl:ENSP00000465610 psi-mi:kif9_human(display_long)|uniprotkb:KIF9(gene name)|psi-mi:KIF9(display_short) psi-mi:q8nc06-3(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463992 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011532306.1|refseq:NP_071737.1|refseq:NP_001128350.1|refseq:NP_878905.2|refseq:XP_016862518.1|ensembl:ENSG00000088727(gene)|ensembl:ENST00000265529(transcript)|ensembl:ENST00000452770(transcript)|ensembl:ENST00000684063(transcript)|go:"GO:0002102"(podosome)|go:"GO:0003777"(microtubule motor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005871"(kinesin complex)|go:"GO:0005874"(microtubule)|go:"GO:0007018"(microtubule-based movement)|go:"GO:0008017"(microtubule binding)|go:"GO:0022617"(extracellular matrix disassembly)|go:"GO:0031982"(vesicle)|go:"GO:0042802"(identical protein binding)|go:"GO:0071801"(regulation of podosome assembly)|go:"GO:1903008"(organelle disassembly)|go:"GO:1990939"|interpro:IPR001752(Kinesin, motor region)|interpro:IPR019821|interpro:IPR027417|interpro:IPR027640|interpro:IPR036961|mint:Q9HAQ2|rcsb pdb:3NWN|reactome:R-HSA-6811434|reactome:R-HSA-983189|entrezgene/locuslink:64147(identity) ensembl:ENSG00000181513(gene)|ensembl:ENST00000431281(transcript)|ensembl:ENST00000586346(transcript)|ensembl:ENST00000591859(transcript)|intact:EBI-11288411(isoform-parent)|uniprotkb:Q8NC06-3(isoform-parent)|uniprotkb:Q8NC06(isoform-parent)|entrezgene/locuslink:79777(identity) intact:EBI-16432580(see-also) comment:mint|comment:homomint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:53+NnzzIaB0e+FlgTdFXGvetKtg9606 rogid:3B+wNzSVplS3qK5wXZj4EdiPcHU9606 rigid:fHyscIUKPzE5Pmb9q0Ks4YU66Y4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HAQ2 uniprotkb:A0A0S2Z5W7 intact:EBI-8472129|intact:MINT-8417679|uniprotkb:Q9H8A4|uniprotkb:Q86Z28|ensembl:ENSP00000265529|ensembl:ENSP00000391100|ensembl:ENSP00000507186 intact:EBI-16439276 psi-mi:kif9_human(display_long)|uniprotkb:KIF9(gene name)|psi-mi:KIF9(display_short) psi-mi:a0a0s2z5w7_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464008 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011532306.1|refseq:NP_071737.1|refseq:NP_001128350.1|refseq:NP_878905.2|refseq:XP_016862518.1|ensembl:ENSG00000088727(gene)|ensembl:ENST00000265529(transcript)|ensembl:ENST00000452770(transcript)|ensembl:ENST00000684063(transcript)|go:"GO:0002102"(podosome)|go:"GO:0003777"(microtubule motor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005871"(kinesin complex)|go:"GO:0005874"(microtubule)|go:"GO:0007018"(microtubule-based movement)|go:"GO:0008017"(microtubule binding)|go:"GO:0022617"(extracellular matrix disassembly)|go:"GO:0031982"(vesicle)|go:"GO:0042802"(identical protein binding)|go:"GO:0071801"(regulation of podosome assembly)|go:"GO:1903008"(organelle disassembly)|go:"GO:1990939"|interpro:IPR001752(Kinesin, motor region)|interpro:IPR019821|interpro:IPR027417|interpro:IPR027640|interpro:IPR036961|mint:Q9HAQ2|rcsb pdb:3NWN|reactome:R-HSA-6811434|reactome:R-HSA-983189|entrezgene/locuslink:64147(identity) go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0016021"(integral component of membrane)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|refseq:XP_006722148.1|interpro:IPR035984|entrezgene/locuslink:79777(identity) intact:EBI-16432580(see-also) comment:mint|comment:homomint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:53+NnzzIaB0e+FlgTdFXGvetKtg9606 rogid:HNnpsSnhfzjAoJRLrRJcCTSb45o9606 rigid:p3F+p9dQoeO/9dhRV/qA/E+G66w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HAQ2 uniprotkb:Q8NC06 intact:EBI-8472129|intact:MINT-8417679|uniprotkb:Q9H8A4|uniprotkb:Q86Z28|ensembl:ENSP00000265529|ensembl:ENSP00000391100|ensembl:ENSP00000507186 intact:EBI-11288411|uniprotkb:D3DX64|uniprotkb:Q8IUT1|uniprotkb:Q9H8Q4|ensembl:ENSP00000366154|ensembl:ENSP00000482750|intact:EBI-16463973 psi-mi:kif9_human(display_long)|uniprotkb:KIF9(gene name)|psi-mi:KIF9(display_short) psi-mi:acbd4_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464024 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011532306.1|refseq:NP_071737.1|refseq:NP_001128350.1|refseq:NP_878905.2|refseq:XP_016862518.1|ensembl:ENSG00000088727(gene)|ensembl:ENST00000265529(transcript)|ensembl:ENST00000452770(transcript)|ensembl:ENST00000684063(transcript)|go:"GO:0002102"(podosome)|go:"GO:0003777"(microtubule motor activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005871"(kinesin complex)|go:"GO:0005874"(microtubule)|go:"GO:0007018"(microtubule-based movement)|go:"GO:0008017"(microtubule binding)|go:"GO:0022617"(extracellular matrix disassembly)|go:"GO:0031982"(vesicle)|go:"GO:0042802"(identical protein binding)|go:"GO:0071801"(regulation of podosome assembly)|go:"GO:1903008"(organelle disassembly)|go:"GO:1990939"|interpro:IPR001752(Kinesin, motor region)|interpro:IPR019821|interpro:IPR027417|interpro:IPR027640|interpro:IPR036961|mint:Q9HAQ2|rcsb pdb:3NWN|reactome:R-HSA-6811434|reactome:R-HSA-983189|entrezgene/locuslink:64147(identity) refseq:NP_001129177.1|refseq:NP_001129178.1|refseq:NP_001129179.1|refseq:NP_078998.1|refseq:NP_001308281.1|refseq:NP_001308282.1|refseq:XP_016880577.1|refseq:XP_016880580.1|refseq:XP_016880581.1|ensembl:ENSG00000181513(gene)|ensembl:ENST00000376955(transcript)|ensembl:ENST00000619916(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0008289"(lipid binding)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|interpro:IPR035984|rcsb pdb:2WH5|reactome:R-HSA-390918|entrezgene/locuslink:79777(identity) intact:EBI-16432580(see-also) comment:mint|comment:homomint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:53+NnzzIaB0e+FlgTdFXGvetKtg9606 rogid:GtdCbchDgfXEHVgEUU7JnVpA7DQ9606 rigid:wa1KZ4o42ubKnhyIhbRnHOzwcu0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:Q8NC06-3 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-12811089|ensembl:ENSP00000405969|ensembl:ENSP00000465484|ensembl:ENSP00000465610 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:q8nc06-3(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464040 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) ensembl:ENSG00000181513(gene)|ensembl:ENST00000431281(transcript)|ensembl:ENST00000586346(transcript)|ensembl:ENST00000591859(transcript)|intact:EBI-11288411(isoform-parent)|uniprotkb:Q8NC06-3(isoform-parent)|uniprotkb:Q8NC06(isoform-parent)|entrezgene/locuslink:79777(identity) intact:EBI-16433303(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:3B+wNzSVplS3qK5wXZj4EdiPcHU9606 rigid:Y2WnEM4IXKqL0lIun0e+UYGIVcM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:A0A0S2Z5W7 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-16439276 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:a0a0s2z5w7_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464056 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0016021"(integral component of membrane)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|refseq:XP_006722148.1|interpro:IPR035984|entrezgene/locuslink:79777(identity) intact:EBI-16433303(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:HNnpsSnhfzjAoJRLrRJcCTSb45o9606 rigid:34E8NEbJzAcYHMoD4f8LjJWco/Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:Q8NC06 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-11288411|uniprotkb:D3DX64|uniprotkb:Q8IUT1|uniprotkb:Q9H8Q4|ensembl:ENSP00000366154|ensembl:ENSP00000482750|intact:EBI-16463973 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:acbd4_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464072 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) refseq:NP_001129177.1|refseq:NP_001129178.1|refseq:NP_001129179.1|refseq:NP_078998.1|refseq:NP_001308281.1|refseq:NP_001308282.1|refseq:XP_016880577.1|refseq:XP_016880580.1|refseq:XP_016880581.1|ensembl:ENSG00000181513(gene)|ensembl:ENST00000376955(transcript)|ensembl:ENST00000619916(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0008289"(lipid binding)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|interpro:IPR035984|rcsb pdb:2WH5|reactome:R-HSA-390918|entrezgene/locuslink:79777(identity) intact:EBI-16433303(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:GtdCbchDgfXEHVgEUU7JnVpA7DQ9606 rigid:4lVHE43HkhHsQPGeBgIXg2Ag/bM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:Q8NC06-3 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-12811089|ensembl:ENSP00000405969|ensembl:ENSP00000465484|ensembl:ENSP00000465610 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:q8nc06-3(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464088 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) ensembl:ENSG00000181513(gene)|ensembl:ENST00000431281(transcript)|ensembl:ENST00000586346(transcript)|ensembl:ENST00000591859(transcript)|intact:EBI-11288411(isoform-parent)|uniprotkb:Q8NC06-3(isoform-parent)|uniprotkb:Q8NC06(isoform-parent)|entrezgene/locuslink:79777(identity) intact:EBI-16435658(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:3B+wNzSVplS3qK5wXZj4EdiPcHU9606 rigid:8u90uFjZeSf3NTigJAs3LmQzpko true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:A0A0S2Z5W7 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-16439276 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:a0a0s2z5w7_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464104 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0016021"(integral component of membrane)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|refseq:XP_006722148.1|interpro:IPR035984|entrezgene/locuslink:79777(identity) intact:EBI-16435658(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:HNnpsSnhfzjAoJRLrRJcCTSb45o9606 rigid:WupXLsT/fqjlN0zVQVSY86SYrTM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:Q8NC06 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-11288411|uniprotkb:D3DX64|uniprotkb:Q8IUT1|uniprotkb:Q9H8Q4|ensembl:ENSP00000366154|ensembl:ENSP00000482750|intact:EBI-16463973 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:acbd4_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464120 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) refseq:NP_001129177.1|refseq:NP_001129178.1|refseq:NP_001129179.1|refseq:NP_078998.1|refseq:NP_001308281.1|refseq:NP_001308282.1|refseq:XP_016880577.1|refseq:XP_016880580.1|refseq:XP_016880581.1|ensembl:ENSG00000181513(gene)|ensembl:ENST00000376955(transcript)|ensembl:ENST00000619916(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0008289"(lipid binding)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|interpro:IPR035984|rcsb pdb:2WH5|reactome:R-HSA-390918|entrezgene/locuslink:79777(identity) intact:EBI-16435658(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:GtdCbchDgfXEHVgEUU7JnVpA7DQ9606 rigid:4tUNKovV1oeDpJfUCGYPxQWIl8Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q8NC06-3 intact:EBI-16439278 intact:EBI-12811089|ensembl:ENSP00000405969|ensembl:ENSP00000465484|ensembl:ENSP00000465610 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:q8nc06-3(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464136 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) ensembl:ENSG00000181513(gene)|ensembl:ENST00000431281(transcript)|ensembl:ENST00000586346(transcript)|ensembl:ENST00000591859(transcript)|intact:EBI-11288411(isoform-parent)|uniprotkb:Q8NC06-3(isoform-parent)|uniprotkb:Q8NC06(isoform-parent)|entrezgene/locuslink:79777(identity) intact:EBI-16439289(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:3B+wNzSVplS3qK5wXZj4EdiPcHU9606 rigid:okrjLyPD+lP7YCJ3ndkHWHncgxk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q8NC06 intact:EBI-16439278 intact:EBI-11288411|uniprotkb:D3DX64|uniprotkb:Q8IUT1|uniprotkb:Q9H8Q4|ensembl:ENSP00000366154|ensembl:ENSP00000482750|intact:EBI-16463973 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:acbd4_human(display_long)|uniprotkb:ACBD4(gene name)|psi-mi:ACBD4(display_short)|uniprotkb:HMFT0700(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464152 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:NP_001129177.1|refseq:NP_001129178.1|refseq:NP_001129179.1|refseq:NP_078998.1|refseq:NP_001308281.1|refseq:NP_001308282.1|refseq:XP_016880577.1|refseq:XP_016880580.1|refseq:XP_016880581.1|ensembl:ENSG00000181513(gene)|ensembl:ENST00000376955(transcript)|ensembl:ENST00000619916(transcript)|go:"GO:0000062"(fatty-acyl-CoA binding)|go:"GO:0008289"(lipid binding)|interpro:IPR000582(Acyl-CoA-binding protein, ACBP)|interpro:IPR014352(FERM/acyl-CoA-binding protein, 3-helical bundle)|interpro:IPR022408|interpro:IPR035984|rcsb pdb:2WH5|reactome:R-HSA-390918|entrezgene/locuslink:79777(identity) intact:EBI-16439289(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:GtdCbchDgfXEHVgEUU7JnVpA7DQ9606 rigid:fovy9MT8NydHLCiJx3MlDPu1i6o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q93062-3 uniprotkb:Q9NUQ8 intact:EBI-740343|ensembl:ENSP00000340176 intact:EBI-717672|uniprotkb:Q86UA2|uniprotkb:Q8NAN1|uniprotkb:Q96GS8|uniprotkb:Q9H7A8|uniprotkb:A8K241|ensembl:ENSP00000411471 psi-mi:q93062-3(display_long)|uniprotkb:RBPMS(gene name)|psi-mi:RBPMS(display_short)|uniprotkb:HERMES(gene name synonym)|uniprotkb:Heart and RRM expressed sequence(gene name synonym) psi-mi:abcf3_human(display_long)|uniprotkb:ABCF3(gene name)|psi-mi:ABCF3(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16463893 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740322(rbpms_human)|uniprotkb:Q93062-3(isoform-parent)|ensembl:ENSG00000157110(gene)|ensembl:ENST00000339877(transcript)|entrezgene/locuslink:11030(identity) refseq:NP_060828.2|ensembl:ENSG00000161204(gene)|ensembl:ENST00000429586(transcript)|interpro:IPR003593(AAA+ ATPase, core)|go:"GO:0005524"(ATP binding)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|go:"GO:0016020"(membrane)|mint:Q9NUQ8|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|go:"GO:0045296"(cadherin binding)|go:"GO:0051607"(defense response to virus)|interpro:IPR003439(ABC transporter-like)|entrezgene/locuslink:55324(identity) intact:EBI-16433714(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nlPMQAJoKEbPYBwsL3xodmCKd7c9606 rogid:lCleN3/TzwUbPMZzkKRJzNygge89606 rigid:z6SDo5ZJlomDoVXTHLU51VWV2SQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50542-3 uniprotkb:Q9ULJ7-2 intact:EBI-12181987|ensembl:ENSP00000266564|ensembl:ENSP00000500230 intact:EBI-12239063|ensembl:ENSP00000425355 psi-mi:p50542-3(display_long)|uniprotkb:PEX5(gene name)|psi-mi:PEX5(display_short)|uniprotkb:PTS1-BP(gene name synonym)|uniprotkb:PXR1(gene name synonym)|uniprotkb:Peroxin-5(gene name synonym)|uniprotkb:Peroxisomal C-terminal targeting signal import receptor(gene name synonym)|uniprotkb:Peroxisome receptor 1(gene name synonym) psi-mi:q9ulj7-2(display_long)|uniprotkb:ANKRD50(gene name)|psi-mi:ANKRD50(display_short)|uniprotkb:KIAA1223(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464332 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-597835(isoform-parent)|uniprotkb:P50542-3(isoform-parent)|ensembl:ENSG00000139197(gene)|ensembl:ENSG00000288217(gene)|ensembl:ENST00000266564(transcript)|ensembl:ENST00000672776(transcript)|entrezgene/locuslink:5830(identity) intact:EBI-5653671(isoform-parent)|uniprotkb:Q9ULJ7-2(isoform-parent)|ensembl:ENSG00000151458(gene)|ensembl:ENST00000515641(transcript)|entrezgene/locuslink:57182(identity) intact:EBI-16433395(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:HHmRC1+icpDic4lf7z1DLsXG/gY9606 rogid:vF7ybJTcu6xrDedqEvvMz+15f3Y9606 rigid:jzZZwZ6yey6fym6J4qhv8p0XJrk true - sufficient binding region:508-1250 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y4X0 uniprotkb:Q6FHY5 intact:EBI-8583355|ensembl:ENSP00000262844|uniprotkb:Q8WX22|intact:MINT-3086664|uniprotkb:Q5JYV9|uniprotkb:Q6P9D8|uniprotkb:Q9UIQ8 intact:EBI-16439278 psi-mi:ammr1_human(display_long)|uniprotkb:AMMECR1(gene name)|psi-mi:AMMECR1(display_short) psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464316 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000101935(gene)|ensembl:ENST00000262844(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|interpro:IPR002733(AMMECR1)|interpro:IPR023473|interpro:IPR027485|interpro:IPR036071|mint:Q9Y4X0|refseq:NP_001020751.1|refseq:NP_056180.1|refseq:NP_001165160.1|entrezgene/locuslink:9949(identity) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) intact:EBI-16439299(see-also) comment:mint|comment:homomint|function:"Defects in AMMECR1 may be a cause of AMME complex [MIM:300194]; also known as Alport syndrome with mental retardation, midface hypoplasia and elliptocytosis. The AMME complex is a contiguous gene deletion syndrome" - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:epeJrGQt5CbnPII1/FSttS0KzwE9606 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rigid:JRTxJMggk5NoA0L3DkjM6f4vA6c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95967 uniprotkb:Q9Y4X0-3 intact:EBI-743414|uniprotkb:O75967|uniprotkb:A8K7R4|uniprotkb:B3KM31|uniprotkb:B3KQT1|ensembl:ENSP00000309953|ensembl:ENSP00000435295 intact:EBI-12823597|ensembl:ENSP00000361129 psi-mi:fbln4_human(display_long)|uniprotkb:Fibulin-4(gene name synonym)|uniprotkb:Protein UPH1(gene name synonym)|uniprotkb:EFEMP2(gene name)|psi-mi:EFEMP2(display_short)|uniprotkb:FBLN4(gene name synonym)|uniprotkb:UNQ200/PRO226(orf name) psi-mi:q9y4x0-3(display_long)|uniprotkb:AMMECR1(gene name)|psi-mi:AMMECR1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464300 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_058634.4|ensembl:ENSG00000172638(gene)|ensembl:ENST00000307998(transcript)|ensembl:ENST00000531972(transcript)|go:"GO:0001527"(microfibril)|go:"GO:0005201"(extracellular matrix structural constituent)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005604"(basement membrane)|go:"GO:0008201"(heparin binding)|go:"GO:0031012"(extracellular matrix)|go:"GO:0035904"(aorta development)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0048251"(elastic fiber assembly)|go:"GO:0060414"(aorta smooth muscle tissue morphogenesis)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071953"(elastic fiber)|go:"GO:0097084"(vascular associated smooth muscle cell development)|go:"GO:1903561"(extracellular vesicle)|go:"GO:1904026"(regulation of collagen fibril organization)|go:"GO:1904028"(positive regulation of collagen fibril organization)|go:"GO:1904706"(negative regulation of vascular associated smooth muscle cell proliferation)|go:"GO:1904831"(positive regulation of aortic smooth muscle cell differentiation)|go:"GO:1905609"(positive regulation of smooth muscle cell-matrix adhesion)|interpro:IPR000152(Aspartic acid and asparagine hydroxylation site)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR001881(EGF-like calcium-binding)|interpro:IPR009030(Growth factor, receptor)|interpro:IPR018097|interpro:IPR026823|interpro:IPR026824|mint:O95967|rcsb pdb:2KL7|reactome:R-HSA-2129379|dip:DIP-34518N|entrezgene/locuslink:30008(identity) uniprotkb:Q9Y4X0-3(isoform-parent)|ensembl:ENSG00000101935(gene)|ensembl:ENST00000372059(transcript)|intact:EBI-8583355(isoform-parent)|entrezgene/locuslink:9949(identity) intact:EBI-16433227(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:L8jMp8rFYb6DRRusfWgyd9zN2KI9606 rogid:lLHOM38DC5g4w13Mv5lvL9Ci6Ec9606 rigid:p+gCaNkGJbBQAk96n6i3aYaUncI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:Q9Y4X0-3 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-12823597|ensembl:ENSP00000361129 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:q9y4x0-3(display_long)|uniprotkb:AMMECR1(gene name)|psi-mi:AMMECR1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464284 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) uniprotkb:Q9Y4X0-3(isoform-parent)|ensembl:ENSG00000101935(gene)|ensembl:ENST00000372059(transcript)|intact:EBI-8583355(isoform-parent)|entrezgene/locuslink:9949(identity) intact:EBI-16432098(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:lLHOM38DC5g4w13Mv5lvL9Ci6Ec9606 rigid:ckur0mjrtKfJI7kWjGEHJY+zBrc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5JR59-3 uniprotkb:P31749 intact:EBI-11522433|ensembl:ENSP00000370186 intact:EBI-296087|uniprotkb:Q9BWB6|ensembl:ENSP00000270202|ensembl:ENSP00000384293|ensembl:ENSP00000385326|ensembl:ENSP00000450688|ensembl:ENSP00000451166|ensembl:ENSP00000451828|ensembl:ENSP00000507879|ensembl:ENSP00000497822|uniprotkb:B2RAM5|uniprotkb:B7Z5R1 psi-mi:q5jr59-3(display_long)|uniprotkb:MTUS2(gene name)|psi-mi:MTUS2(display_short)|uniprotkb:CAZIP(gene name synonym)|uniprotkb:Cardiac zipper protein(gene name synonym)|uniprotkb:KIAA0774(gene name synonym)|uniprotkb:Microtubule plus-end tracking protein TIP150(gene name synonym)|uniprotkb:TIP150(gene name synonym) psi-mi:akt1_human(display_long)|uniprotkb:AKT1(gene name)|psi-mi:AKT1(display_short)|uniprotkb:PKB(gene name synonym)|uniprotkb:RAC(gene name synonym)|uniprotkb:RAC-PK-alpha(gene name synonym)|uniprotkb:Protein kinase B(gene name synonym)|uniprotkb:Proto-oncogene c-Akt(gene name synonym)|uniprotkb:Protein kinase B alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464268 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000132938(gene)|ensembl:ENST00000380808(transcript)|intact:EBI-742948(isoform-parent)|uniprotkb:Q5JR59-3(isoform-parent)|entrezgene/locuslink:23281(identity) go:"GO:0008283"(cell population proliferation)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008286"(insulin receptor signaling pathway)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0008643"(carbohydrate transport)|go:"GO:0009408"(response to heat)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0010595"(positive regulation of endothelial cell migration)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010748"(negative regulation of long-chain fatty acid import across plasma membrane)|go:"GO:0010761"(fibroblast migration)|go:"GO:0010763"(positive regulation of fibroblast migration)|go:"GO:0010765"(positive regulation of sodium ion transport)|go:"GO:0010907"(positive regulation of glucose metabolic process)|go:"GO:0010918"(positive regulation of mitochondrial membrane potential)|go:"GO:0010951"(negative regulation of endopeptidase activity)|go:"GO:0010975"(regulation of neuron projection development)|go:"GO:0014065"(phosphatidylinositol 3-kinase signaling)|go:"GO:0007568"(aging)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0016301"(kinase activity)|go:"GO:0016310"(phosphorylation)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019899"(enzyme binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030154"(cell differentiation)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030212"(hyaluronan metabolic process)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030334"(regulation of cell migration)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0036064"(ciliary basal body)|go:"GO:0038061"(NIK/NF-kappaB signaling)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043276"(anoikis)|go:"GO:0043325"(phosphatidylinositol-3,4-bisphosphate binding)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043536"(positive regulation of blood vessel endothelial cell migration)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045600"(positive regulation of fat cell differentiation)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|ensembl:ENSG00000142208(gene)|go:"GO:0031295"(T cell costimulation)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0031641"(regulation of myelination)|go:"GO:0031663"(lipopolysaccharide-mediated signaling pathway)|go:"GO:0031929"(TOR signaling)|go:"GO:0031982"(vesicle)|go:"GO:0031999"(negative regulation of fatty acid beta-oxidation)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032094"(response to food)|go:"GO:0032270"(positive regulation of cellular protein metabolic process)|go:"GO:0032287"(peripheral nervous system myelin maintenance)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032794"(GTPase activating protein binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032929"(negative regulation of superoxide anion generation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034405"(response to fluid shear stress)|go:"GO:0034614"(cellular response to reactive oxygen species)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035655"(interleukin-18-mediated signaling pathway)|go:"GO:0035924"(cellular response to vascular endothelial growth factor stimulus)|ensembl:ENST00000349310(transcript)|ensembl:ENST00000402615(transcript)|ensembl:ENST00000407796(transcript)|ensembl:ENST00000554581(transcript)|ensembl:ENST00000554848(transcript)|ensembl:ENST00000555528(transcript)|ensembl:ENST00000649815(transcript)|ensembl:ENST00000683722(transcript)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0001893"(maternal placenta development)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001938"(positive regulation of endothelial cell proliferation)|go:"GO:0002042"(cell migration involved in sprouting angiogenesis)|go:"GO:0002931"(response to ischemia)|go:"GO:0003376"(sphingosine-1-phosphate receptor signaling pathway)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004712"(protein serine/threonine/tyrosine kinase activity)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005547"(phosphatidylinositol-3,4,5-trisphosphate binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005978"(glycogen biosynthetic process)|go:"GO:0005979"(regulation of glycogen biosynthetic process)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006412"(translation)|go:"GO:0006417"(regulation of translation)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006924"(activation-induced cell death of T cells)|go:"GO:0006954"(inflammatory response)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007165"(signal transduction)|go:"GO:0007173"(epidermal growth factor receptor signaling pathway)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0007249"(I-kappaB kinase/NF-kappaB signaling)|go:"GO:0007281"(germ cell development)|go:"GO:0005739"(mitochondrion)|go:"GO:0045725"(positive regulation of glycogen biosynthetic process)|go:"GO:0045737"(positive regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045792"(negative regulation of cell size)|go:"GO:0045861"(negative regulation of proteolysis)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045907"(positive regulation of vasoconstriction)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046329"(negative regulation of JNK cascade)|go:"GO:0046622"(positive regulation of organ growth)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0046889"(positive regulation of lipid biosynthetic process)|go:"GO:0048009"(insulin-like growth factor receptor signaling pathway)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051000"(positive regulation of nitric-oxide synthase activity)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051146"(striated muscle cell differentiation)|go:"GO:0051721"(protein phosphatase 2A binding)|go:"GO:0060079"(excitatory postsynaptic potential)|go:"GO:0060416"(response to growth hormone)|go:"GO:0060644"(mammary gland epithelial cell differentiation)|go:"GO:0060709"(glycogen cell differentiation involved in embryonic placenta development)|go:"GO:0060716"(labyrinthine layer blood vessel development)|go:"GO:0070141"(response to UV-A)|go:"GO:0070848"(response to growth factor)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071380"(cellular response to prostaglandin E stimulus)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071889"(14-3-3 protein binding)|go:"GO:0071901"(negative regulation of protein serine/threonine kinase activity)|go:"GO:0072655"(establishment of protein localization to mitochondrion)|go:"GO:0072656"(maintenance of protein location in mitochondrion)|go:"GO:0071276"(cellular response to cadmium ion)|go:"GO:0090201"(negative regulation of release of cytochrome c from mitochondria)|go:"GO:0097011"(cellular response to granulocyte macrophage colony-stimulating factor stimulus)|go:"GO:0097194"(execution phase of apoptosis)|go:"GO:0098794"(postsynapse)|go:"GO:0099104"(potassium channel activator activity)|go:"GO:0100002"(negative regulation of protein kinase activity by protein phosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:0110099"(negative regulation of calcium import into the mitochondrion)|go:"GO:0140052"(cellular response to oxidised low-density lipoprotein particle stimulus)|go:"GO:1900087"(positive regulation of G1/S transition of mitotic cell cycle)|go:"GO:1900182"(positive regulation of protein localization to nucleus)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|go:"GO:1902176"(negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903038"(negative regulation of leukocyte cell-cell adhesion)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1903715"(regulation of aerobic respiration)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990418"(response to insulin-like growth factor stimulus)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|go:"GO:2000074"(regulation of type B pancreatic cell development)|go:"GO:2000402"(negative regulation of lymphocyte migration)|go:"GO:2001240"(negative regulation of extrinsic apoptotic signaling pathway in absence of ligand)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|interpro:IPR034676|interpro:IPR039026|interpro:IPR039027|mint:P31749|rcsb pdb:1H10|rcsb pdb:1UNP|rcsb pdb:1UNQ|reactome:R-HSA-1474151|reactome:R-HSA-165159|reactome:R-HSA-198323|reactome:R-HSA-198693|reactome:R-HSA-199418|reactome:R-HSA-203615|reactome:R-HSA-211163|reactome:R-HSA-354192|reactome:R-HSA-3769402|reactome:R-HSA-389357|reactome:R-HSA-389513|reactome:R-HSA-392451|reactome:R-HSA-450385|reactome:R-HSA-450604|reactome:R-HSA-5218920|rcsb pdb:6S9X|reactome:R-HSA-5628897|reactome:R-HSA-5674400|reactome:R-HSA-111447|reactome:R-HSA-6785807|reactome:R-HSA-6804757|reactome:R-HSA-6804758|reactome:R-HSA-6804759|reactome:R-HSA-1257604|reactome:R-HSA-1358803|reactome:R-HSA-1445148|reactome:R-HSA-6811558|reactome:R-HSA-69202|reactome:R-HSA-69656|reactome:R-HSA-8849469|reactome:R-HSA-8876198|reactome:R-HSA-8941332|reactome:R-HSA-8948751|reactome:R-HSA-9009391|rcsb pdb:1UNR|rcsb pdb:2UVM|rcsb pdb:2UZR|rcsb pdb:2UZS|rcsb pdb:3CQU|rcsb pdb:3CQW|rcsb pdb:3MV5|rcsb pdb:3MVH|rcsb pdb:3O96|rcsb pdb:3OCB|rcsb pdb:3OW4|rcsb pdb:3QKK|rcsb pdb:3QKL|rcsb pdb:3QKM|rcsb pdb:4EJN|rcsb pdb:4EKK|rcsb pdb:4EKL|rcsb pdb:4GV1|rcsb pdb:5KCV|rcsb pdb:6BUU|rcsb pdb:6CCY|rcsb pdb:6HHF|rcsb pdb:6HHG|rcsb pdb:6HHH|rcsb pdb:6HHI|rcsb pdb:6HHJ|rcsb pdb:6NPZ|rcsb pdb:6S9W|reactome:R-HSA-9607240|reactome:R-HSA-9614399|reactome:R-HSA-9634638|reactome:R-HSA-9604323|refseq:NP_001014431.1|refseq:NP_001014432.1|refseq:NP_005154.2|refseq:XP_005267458.1|dip:DIP-24269N|entrezgene/locuslink:207(identity) intact:EBI-16440828(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:npId9tC7VoLN/jteoBiRbSYChPs9606 rogid:9bYBB1SbEBm+NM0maKOC5Bx6KlI9606 rigid:ruA0QdGBkyEQDYPkkYEF4UTqqP4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-10177480 uniprotkb:P31749 - intact:EBI-296087|uniprotkb:Q9BWB6|ensembl:ENSP00000270202|ensembl:ENSP00000384293|ensembl:ENSP00000385326|ensembl:ENSP00000450688|ensembl:ENSP00000451166|ensembl:ENSP00000451828|ensembl:ENSP00000507879|ensembl:ENSP00000497822|uniprotkb:B2RAM5|uniprotkb:B7Z5R1 psi-mi:clone_11897(display_short)|psi-mi:EBI-10177480(display_long)|uniprotkb:Cerebral protein 11(gene name synonym)|uniprotkb:KIAA0481(gene name synonym)|uniprotkb:hucep-11(orf name)|uniprotkb:TMCC2(gene name)|psi-mi:TMCC2(display_short) psi-mi:akt1_human(display_long)|uniprotkb:AKT1(gene name)|psi-mi:AKT1(display_short)|uniprotkb:PKB(gene name synonym)|uniprotkb:RAC(gene name synonym)|uniprotkb:RAC-PK-alpha(gene name synonym)|uniprotkb:Protein kinase B(gene name synonym)|uniprotkb:Proto-oncogene c-Akt(gene name synonym)|uniprotkb:Protein kinase B alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464252 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:O75069-4(see-also)|intact:EBI-12696212(see-also)|intact:EBI-726731(see-also)|entrezgene/locuslink:9911(identity) go:"GO:0008283"(cell population proliferation)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008286"(insulin receptor signaling pathway)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0008643"(carbohydrate transport)|go:"GO:0009408"(response to heat)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0010595"(positive regulation of endothelial cell migration)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0010748"(negative regulation of long-chain fatty acid import across plasma membrane)|go:"GO:0010761"(fibroblast migration)|go:"GO:0010763"(positive regulation of fibroblast migration)|go:"GO:0010765"(positive regulation of sodium ion transport)|go:"GO:0010907"(positive regulation of glucose metabolic process)|go:"GO:0010918"(positive regulation of mitochondrial membrane potential)|go:"GO:0010951"(negative regulation of endopeptidase activity)|go:"GO:0010975"(regulation of neuron projection development)|go:"GO:0014065"(phosphatidylinositol 3-kinase signaling)|go:"GO:0007568"(aging)|go:"GO:0016242"(negative regulation of macroautophagy)|go:"GO:0016301"(kinase activity)|go:"GO:0016310"(phosphorylation)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019899"(enzyme binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0030027"(lamellipodium)|go:"GO:0030030"(cell projection organization)|go:"GO:0030154"(cell differentiation)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030212"(hyaluronan metabolic process)|go:"GO:0030235"(nitric-oxide synthase regulator activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0030334"(regulation of cell migration)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0036064"(ciliary basal body)|go:"GO:0038061"(NIK/NF-kappaB signaling)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043276"(anoikis)|go:"GO:0043325"(phosphatidylinositol-3,4-bisphosphate binding)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0043491"(protein kinase B signaling)|go:"GO:0043536"(positive regulation of blood vessel endothelial cell migration)|go:"GO:0045429"(positive regulation of nitric oxide biosynthetic process)|go:"GO:0045600"(positive regulation of fat cell differentiation)|go:"GO:0031234"(extrinsic component of cytoplasmic side of plasma membrane)|ensembl:ENSG00000142208(gene)|go:"GO:0031295"(T cell costimulation)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0031641"(regulation of myelination)|go:"GO:0031663"(lipopolysaccharide-mediated signaling pathway)|go:"GO:0031929"(TOR signaling)|go:"GO:0031982"(vesicle)|go:"GO:0031999"(negative regulation of fatty acid beta-oxidation)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032094"(response to food)|go:"GO:0032270"(positive regulation of cellular protein metabolic process)|go:"GO:0032287"(peripheral nervous system myelin maintenance)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0032794"(GTPase activating protein binding)|go:"GO:0032869"(cellular response to insulin stimulus)|go:"GO:0032929"(negative regulation of superoxide anion generation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034405"(response to fluid shear stress)|go:"GO:0034614"(cellular response to reactive oxygen species)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0035655"(interleukin-18-mediated signaling pathway)|go:"GO:0035924"(cellular response to vascular endothelial growth factor stimulus)|ensembl:ENST00000349310(transcript)|ensembl:ENST00000402615(transcript)|ensembl:ENST00000407796(transcript)|ensembl:ENST00000554581(transcript)|ensembl:ENST00000554848(transcript)|ensembl:ENST00000555528(transcript)|ensembl:ENST00000649815(transcript)|ensembl:ENST00000683722(transcript)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0001893"(maternal placenta development)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0001938"(positive regulation of endothelial cell proliferation)|go:"GO:0002042"(cell migration involved in sprouting angiogenesis)|go:"GO:0002931"(response to ischemia)|go:"GO:0003376"(sphingosine-1-phosphate receptor signaling pathway)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004712"(protein serine/threonine/tyrosine kinase activity)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005547"(phosphatidylinositol-3,4,5-trisphosphate binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005978"(glycogen biosynthetic process)|go:"GO:0005979"(regulation of glycogen biosynthetic process)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0006412"(translation)|go:"GO:0006417"(regulation of translation)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006809"(nitric oxide biosynthetic process)|go:"GO:0006924"(activation-induced cell death of T cells)|go:"GO:0006954"(inflammatory response)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0007165"(signal transduction)|go:"GO:0007173"(epidermal growth factor receptor signaling pathway)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0007249"(I-kappaB kinase/NF-kappaB signaling)|go:"GO:0007281"(germ cell development)|go:"GO:0005739"(mitochondrion)|go:"GO:0045725"(positive regulation of glycogen biosynthetic process)|go:"GO:0045737"(positive regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045792"(negative regulation of cell size)|go:"GO:0045861"(negative regulation of proteolysis)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045907"(positive regulation of vasoconstriction)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046326"(positive regulation of glucose import)|go:"GO:0046329"(negative regulation of JNK cascade)|go:"GO:0046622"(positive regulation of organ growth)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0046889"(positive regulation of lipid biosynthetic process)|go:"GO:0048009"(insulin-like growth factor receptor signaling pathway)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:0051000"(positive regulation of nitric-oxide synthase activity)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051146"(striated muscle cell differentiation)|go:"GO:0051721"(protein phosphatase 2A binding)|go:"GO:0060079"(excitatory postsynaptic potential)|go:"GO:0060416"(response to growth hormone)|go:"GO:0060644"(mammary gland epithelial cell differentiation)|go:"GO:0060709"(glycogen cell differentiation involved in embryonic placenta development)|go:"GO:0060716"(labyrinthine layer blood vessel development)|go:"GO:0070141"(response to UV-A)|go:"GO:0070848"(response to growth factor)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071380"(cellular response to prostaglandin E stimulus)|go:"GO:0071407"(cellular response to organic cyclic compound)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071889"(14-3-3 protein binding)|go:"GO:0071901"(negative regulation of protein serine/threonine kinase activity)|go:"GO:0072655"(establishment of protein localization to mitochondrion)|go:"GO:0072656"(maintenance of protein location in mitochondrion)|go:"GO:0071276"(cellular response to cadmium ion)|go:"GO:0090201"(negative regulation of release of cytochrome c from mitochondria)|go:"GO:0097011"(cellular response to granulocyte macrophage colony-stimulating factor stimulus)|go:"GO:0097194"(execution phase of apoptosis)|go:"GO:0098794"(postsynapse)|go:"GO:0099104"(potassium channel activator activity)|go:"GO:0100002"(negative regulation of protein kinase activity by protein phosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:0110099"(negative regulation of calcium import into the mitochondrion)|go:"GO:0140052"(cellular response to oxidised low-density lipoprotein particle stimulus)|go:"GO:1900087"(positive regulation of G1/S transition of mitotic cell cycle)|go:"GO:1900182"(positive regulation of protein localization to nucleus)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|go:"GO:1902176"(negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903038"(negative regulation of leukocyte cell-cell adhesion)|go:"GO:1903078"(positive regulation of protein localization to plasma membrane)|go:"GO:1903715"(regulation of aerobic respiration)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990418"(response to insulin-like growth factor stimulus)|go:"GO:2000010"(positive regulation of protein localization to cell surface)|go:"GO:2000074"(regulation of type B pancreatic cell development)|go:"GO:2000402"(negative regulation of lymphocyte migration)|go:"GO:2001240"(negative regulation of extrinsic apoptotic signaling pathway in absence of ligand)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|interpro:IPR034676|interpro:IPR039026|interpro:IPR039027|mint:P31749|rcsb pdb:1H10|rcsb pdb:1UNP|rcsb pdb:1UNQ|reactome:R-HSA-1474151|reactome:R-HSA-165159|reactome:R-HSA-198323|reactome:R-HSA-198693|reactome:R-HSA-199418|reactome:R-HSA-203615|reactome:R-HSA-211163|reactome:R-HSA-354192|reactome:R-HSA-3769402|reactome:R-HSA-389357|reactome:R-HSA-389513|reactome:R-HSA-392451|reactome:R-HSA-450385|reactome:R-HSA-450604|reactome:R-HSA-5218920|rcsb pdb:6S9X|reactome:R-HSA-5628897|reactome:R-HSA-5674400|reactome:R-HSA-111447|reactome:R-HSA-6785807|reactome:R-HSA-6804757|reactome:R-HSA-6804758|reactome:R-HSA-6804759|reactome:R-HSA-1257604|reactome:R-HSA-1358803|reactome:R-HSA-1445148|reactome:R-HSA-6811558|reactome:R-HSA-69202|reactome:R-HSA-69656|reactome:R-HSA-8849469|reactome:R-HSA-8876198|reactome:R-HSA-8941332|reactome:R-HSA-8948751|reactome:R-HSA-9009391|rcsb pdb:1UNR|rcsb pdb:2UVM|rcsb pdb:2UZR|rcsb pdb:2UZS|rcsb pdb:3CQU|rcsb pdb:3CQW|rcsb pdb:3MV5|rcsb pdb:3MVH|rcsb pdb:3O96|rcsb pdb:3OCB|rcsb pdb:3OW4|rcsb pdb:3QKK|rcsb pdb:3QKL|rcsb pdb:3QKM|rcsb pdb:4EJN|rcsb pdb:4EKK|rcsb pdb:4EKL|rcsb pdb:4GV1|rcsb pdb:5KCV|rcsb pdb:6BUU|rcsb pdb:6CCY|rcsb pdb:6HHF|rcsb pdb:6HHG|rcsb pdb:6HHH|rcsb pdb:6HHI|rcsb pdb:6HHJ|rcsb pdb:6NPZ|rcsb pdb:6S9W|reactome:R-HSA-9607240|reactome:R-HSA-9614399|reactome:R-HSA-9634638|reactome:R-HSA-9604323|refseq:NP_001014431.1|refseq:NP_001014432.1|refseq:NP_005154.2|refseq:XP_005267458.1|dip:DIP-24269N|entrezgene/locuslink:207(identity) intact:EBI-16430472(see-also) no-uniprot-update:|caution:The sequence has been withdrawn from uniprot. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/22 rogid:hIJ1KAUaIyjszZvvmcTXV6Nox8o9606 rogid:9bYBB1SbEBm+NM0maKOC5Bx6KlI9606 rigid:inJCrqJY5vATY8nElu6HXfZwBCY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P31323 uniprotkb:A0A0S2Z5A1 intact:EBI-2930670|ensembl:ENSP00000265717|ensembl:ENSP00000491687|uniprotkb:A4D0R9 intact:EBI-16464200 psi-mi:kap3_human(display_long)|uniprotkb:PRKAR2B(gene name)|psi-mi:PRKAR2B(display_short) psi-mi:a0a0s2z5a1_human(display_long)|uniprotkb:AKAP10(gene name)|psi-mi:AKAP10(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464235 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000005249(gene)|ensembl:ENSG00000284096(gene)|ensembl:ENST00000265717(transcript)|ensembl:ENST00000639737(transcript)|go:"GO:0004862"(cAMP-dependent protein kinase inhibitor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006631"(fatty acid metabolic process)|go:"GO:0005952"(cAMP-dependent protein kinase complex)|go:"GO:0007612"(learning)|go:"GO:0008603"(cAMP-dependent protein kinase regulator activity)|go:"GO:0010738"(regulation of protein kinase A signaling)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030552"(cAMP binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043949"(regulation of cAMP-mediated signaling)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0070062"(extracellular exosome)|go:"GO:0097332"(response to antipsychotic drug)|go:"GO:0097338"(response to clozapine)|go:"GO:0097546"(ciliary base)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:2000480"(negative regulation of cAMP-dependent protein kinase activity)|interpro:IPR000595(Cyclic nucleotide-binding)|interpro:IPR003117(cAMP-dependent protein kinase, regulatory subunit, type I/II alpha/beta)|interpro:IPR012198(cAMP-dependent protein kinase regulatory subunit)|interpro:IPR014710(RmlC-like jelly roll fold)|interpro:IPR018488|interpro:IPR018490|mint:P31323|reactome:R-HSA-163615|reactome:R-HSA-164378|reactome:R-HSA-180024|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-381676|reactome:R-HSA-432040|reactome:R-HSA-442720|reactome:R-HSA-5610787|reactome:R-HSA-5620912|reactome:R-HSA-8854518|reactome:R-HSA-9660821|reactome:R-HSA-9664323|reactome:R-HSA-983231|refseq:NP_002727.2|dip:DIP-554N|entrezgene/locuslink:5577(identity) go:"GO:0016301"(kinase activity)|entrezgene/locuslink:11216(identity) intact:EBI-16431706(see-also)|intact:EBI-16431721(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:P643dCCYtpt/EkR7tmZrbo97FLE9606 rogid:xFdTRYl8qw6Ue2e94+e/kOyic3A9606 rigid:5KO+2BTLTOEa6bqNXOG+9D/snAI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UKT9 uniprotkb:A0A0S2Z551 intact:EBI-747204|uniprotkb:Q8WWQ9|uniprotkb:Q8WWR0|uniprotkb:Q8WWR1|uniprotkb:Q8WWR2|uniprotkb:Q8WWR3|uniprotkb:Q8N574|uniprotkb:B4DVV5|uniprotkb:Q69BL6|uniprotkb:Q69BL7|uniprotkb:Q69BL8|uniprotkb:Q69BL9|uniprotkb:Q69BM0|uniprotkb:Q69BM1|uniprotkb:Q69BM2|uniprotkb:Q69BM3|uniprotkb:Q69BM5|ensembl:ENSP00000344544 intact:EBI-16431716 psi-mi:ikzf3_human(display_long)|uniprotkb:ZNFN1A3(gene name synonym)|uniprotkb:Ikaros family zinc finger protein 3(gene name synonym)|uniprotkb:IKZF3(gene name)|psi-mi:IKZF3(display_short) psi-mi:a0a0s2z551_human(display_long)|uniprotkb:AKAP10(gene name)|psi-mi:AKAP10(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464219 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001271443.1|refseq:NP_001271444.1|refseq:NP_036613.2|refseq:NP_899051.1|refseq:NP_899052.1|refseq:NP_899053.1|refseq:NP_899054.1|refseq:NP_899055.1|refseq:NP_001271445.1|refseq:NP_001244337.1|refseq:NP_001244338.1|refseq:NP_001244339.1|refseq:NP_001244340.1|refseq:NP_001244341.1|refseq:NP_001244342.1|refseq:NP_001244343.1|ensembl:ENSG00000161405(gene)|ensembl:ENST00000346872(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0009617"(response to bacterium)|go:"GO:0030888"(regulation of B cell proliferation)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045577"(regulation of B cell differentiation)|go:"GO:0045619"(regulation of lymphocyte differentiation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|go:"GO:0046872"(metal ion binding)|dip:DIP-56975N|entrezgene/locuslink:22806(identity) go:"GO:0016301"(kinase activity)|go:"GO:0051018"(protein kinase A binding)|interpro:IPR037719|entrezgene/locuslink:11216(identity) intact:EBI-16428928(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2Kp6LefSLfK5VIiE6DmQusFIfMY9606 rogid:O6Li2aTpDpFy7i6Ia/aZ/+E95iE9606 rigid:rUft2z4F9+7j93SKFlsHZk8UPNM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UKT9 uniprotkb:A0A0S2Z5A1 intact:EBI-747204|uniprotkb:Q8WWQ9|uniprotkb:Q8WWR0|uniprotkb:Q8WWR1|uniprotkb:Q8WWR2|uniprotkb:Q8WWR3|uniprotkb:Q8N574|uniprotkb:B4DVV5|uniprotkb:Q69BL6|uniprotkb:Q69BL7|uniprotkb:Q69BL8|uniprotkb:Q69BL9|uniprotkb:Q69BM0|uniprotkb:Q69BM1|uniprotkb:Q69BM2|uniprotkb:Q69BM3|uniprotkb:Q69BM5|ensembl:ENSP00000344544 intact:EBI-16464200 psi-mi:ikzf3_human(display_long)|uniprotkb:ZNFN1A3(gene name synonym)|uniprotkb:Ikaros family zinc finger protein 3(gene name synonym)|uniprotkb:IKZF3(gene name)|psi-mi:IKZF3(display_short) psi-mi:a0a0s2z5a1_human(display_long)|uniprotkb:AKAP10(gene name)|psi-mi:AKAP10(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001271443.1|refseq:NP_001271444.1|refseq:NP_036613.2|refseq:NP_899051.1|refseq:NP_899052.1|refseq:NP_899053.1|refseq:NP_899054.1|refseq:NP_899055.1|refseq:NP_001271445.1|refseq:NP_001244337.1|refseq:NP_001244338.1|refseq:NP_001244339.1|refseq:NP_001244340.1|refseq:NP_001244341.1|refseq:NP_001244342.1|refseq:NP_001244343.1|ensembl:ENSG00000161405(gene)|ensembl:ENST00000346872(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0009617"(response to bacterium)|go:"GO:0030888"(regulation of B cell proliferation)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045577"(regulation of B cell differentiation)|go:"GO:0045619"(regulation of lymphocyte differentiation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|go:"GO:0046872"(metal ion binding)|dip:DIP-56975N|entrezgene/locuslink:22806(identity) go:"GO:0016301"(kinase activity)|entrezgene/locuslink:11216(identity) intact:EBI-16428928(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2Kp6LefSLfK5VIiE6DmQusFIfMY9606 rogid:xFdTRYl8qw6Ue2e94+e/kOyic3A9606 rigid:VghsukR1voK/uKzmq639Jx44fks true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NPC6 uniprotkb:A0A0S2Z3G1 intact:EBI-746712|uniprotkb:O43415|uniprotkb:Q9HB92|ensembl:ENSP00000306997 intact:EBI-16430749 psi-mi:myoz2_human(display_long)|uniprotkb:Calsarcin-1(gene name synonym)|uniprotkb:FATZ-related protein 2(gene name synonym)|uniprotkb:MYOZ2(gene name)|psi-mi:MYOZ2(display_short)|uniprotkb:C4orf5(gene name synonym) psi-mi:a0a0s2z3g1_human(display_long)|uniprotkb:ACTN4(gene name)|psi-mi:ACTN4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464184 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_057683.1|ensembl:ENSG00000172399(gene)|ensembl:ENST00000307128(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003779"(actin binding)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0030017"(sarcomere)|go:"GO:0030018"(Z disc)|go:"GO:0030346"(protein phosphatase 2B binding)|go:"GO:0031433"(telethonin binding)|go:"GO:0043503"(skeletal muscle fiber adaptation)|go:"GO:0045214"(sarcomere organization)|go:"GO:0051373"(FATZ binding)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|interpro:IPR008438(Calcineurin-binding)|entrezgene/locuslink:51778(identity) entrezgene/locuslink:81(identity) intact:EBI-16439028(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Y2B5tDM2oGscI8xiTwB69hFEhL89606 rogid:cBkc6vvPxaFNKnw/GZkKFkGYW5I9606 rigid:1Rmf3VjG47s27Au2CKav4P+m0fc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:O43707 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-351526|uniprotkb:O76048|uniprotkb:D6PXK4|ensembl:ENSP00000252699|ensembl:ENSP00000489220|uniprotkb:A4K467 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:actn4_human(display_long)|uniprotkb:ACTN4(gene name)|psi-mi:ACTN4(display_short)|uniprotkb:Non-muscle alpha-actinin 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464168 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) refseq:NP_004915.2|ensembl:ENSG00000130402(gene)|ensembl:ENSG00000282844(gene)|ensembl:ENST00000252699(transcript)|ensembl:ENST00000634960(transcript)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001882"(nucleoside binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0003779"(actin binding)|go:"GO:0005178"(integrin binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005925"(focal adhesion)|go:"GO:0015031"(protein transport)|go:"GO:0016604"(nuclear body)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030050"(vesicle transport along actin filament)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0031093"(platelet alpha granule lumen)|go:"GO:0031143"(pseudopodium)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0032417"("positive regulation of sodium:proton antiporter activity")|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0035357"(peroxisome proliferator activated receptor signaling pathway)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042974"(retinoic acid receptor binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051015"(actin filament binding)|go:"GO:0051272"(positive regulation of cellular component movement)|go:"GO:0070062"(extracellular exosome)|go:"GO:1900025"(negative regulation of substrate adhesion-dependent cell spreading)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:1903506"(regulation of nucleic acid-templated transcription)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR014837(EF-hand, Ca insensitive)|interpro:IPR018159|interpro:IPR018247|interpro:IPR036872|mint:O43707|rcsb pdb:1WLX|rcsb pdb:1YDI|rcsb pdb:2R0O|rcsb pdb:6O31|rcsb pdb:6OA6|reactome:R-HSA-114608|reactome:R-HSA-373753|dip:DIP-33179N|entrezgene/locuslink:81(identity) intact:EBI-16430751(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:kTYezA2lEtL/AQPfCQ8BE79nzow9606 rigid:D/3niI5MABckYB1EwQvY8KlKoWs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VSY0 uniprotkb:A0A0S2Z4X7 intact:EBI-743722|uniprotkb:Q9BYI2|uniprotkb:Q96LI0|uniprotkb:Q9BYI1|uniprotkb:Q9H225|ensembl:ENSP00000365550 intact:EBI-16464351 psi-mi:gkap1_human(display_long)|uniprotkb:GKAP42(gene name synonym)|uniprotkb:cGMP-dependent protein kinase-anchoring protein of 42 kDa(gene name synonym)|uniprotkb:FKSG21(orf name)|uniprotkb:GKAP1(gene name)|psi-mi:GKAP1(display_short) psi-mi:a0a0s2z4x7_human(display_long)|uniprotkb:AP3B1(gene name)|psi-mi:AP3B1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464354 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165113(gene)|refseq:NP_001129425.1|refseq:NP_079487.2|refseq:XP_011517360.1|refseq:XP_005252298.1|ensembl:ENST00000376371(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007165"(signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046628"(positive regulation of insulin receptor signaling pathway)|interpro:IPR026109|dip:DIP-47324N|entrezgene/locuslink:80318(identity) go:"GO:0016192"(vesicle-mediated transport)|interpro:IPR026739|entrezgene/locuslink:8546(identity) intact:EBI-16438960(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WPAqDDTftv300tbwXkusTo6tmUo9606 rogid:kjlUsukeYVoZcSb+7MoA5pV5ilg9606 rigid:zJXW/f799yyXUhbV4GUccfGVtbw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14613 intact:EBI-16464370 intact:EBI-3438291|uniprotkb:Q9UNS0|uniprotkb:B2RD85|ensembl:ENSP00000279249|ensembl:ENSP00000431660 - psi-mi:borg1_human(display_long)|uniprotkb:CDC42EP2(gene name)|psi-mi:CDC42EP2(display_short)|uniprotkb:BORG1(gene name synonym)|uniprotkb:CEP2(gene name synonym)|uniprotkb:Binder of Rho GTPases 1(gene name synonym) psi-mi:"ccsb isoform id: arhgap26_2"(display_short)|psi-mi:EBI-16464370(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464373 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006770.1|ensembl:ENSG00000149798(gene)|ensembl:ENST00000279249(transcript)|ensembl:ENST00000533419(transcript)|go:"GO:0001515"(opioid peptide activity)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0007015"(actin filament organization)|go:"GO:0007266"(Rho protein signal transduction)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0012505"(endomembrane system)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0031267"(small GTPase binding)|go:"GO:0031274"(positive regulation of pseudopodium assembly)|go:"GO:0031334"(positive regulation of protein-containing complex assembly)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0071346"(cellular response to interferon-gamma)|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR017363(Cdc42 effector protein 2)|interpro:IPR029273|reactome:R-HSA-5687128|reactome:R-HSA-9013148|reactome:R-HSA-9013406|refseq:XP_016872583.1|entrezgene/locuslink:10435(identity) entrezgene/locuslink:23092(identity) intact:EBI-16430972(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9oBDq+/9RNfIIl3yJWKUaxKelcs9606 rogid:RizkcONMrxJVxr6OeCJ46Hx8tKU9606 rigid:ATcgQ0tOMWLdWgg+VgHH9OHdT7o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q53EZ4 uniprotkb:A0A0S2Z543 intact:EBI-747776|uniprotkb:Q32WF5|uniprotkb:Q3MV20|uniprotkb:Q5VY28|uniprotkb:Q6N034|ensembl:ENSP00000360540|uniprotkb:Q96H32|uniprotkb:Q9NVS7|uniprotkb:B2RDG8|intact:EBI-10173536|uniprotkb:D3DR37|intact:EBI-28973801 intact:EBI-16464389 psi-mi:cep55_human(display_long)|uniprotkb:Up-regulated in colon cancer 6(gene name synonym)|uniprotkb:CEP55(gene name)|psi-mi:CEP55(display_short)|uniprotkb:URCC6(gene name synonym)|uniprotkb:C10orf3(gene name synonym) psi-mi:a0a0s2z543_human(display_long)|uniprotkb:ARHGEF15(gene name)|psi-mi:ARHGEF15(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464398 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001120654.1|refseq:NP_060601.3|ensembl:ENSG00000138180(gene)|ensembl:ENST00000371485(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0014066"(regulation of phosphatidylinositol 3-kinase signaling)|go:"GO:0016020"(membrane)|go:"GO:0030496"(midbody)|go:"GO:0032154"(cleavage furrow)|go:"GO:0034451"(centriolar satellite)|go:"GO:0042802"(identical protein binding)|go:"GO:0045171"(intercellular bridge)|go:"GO:0045184"(establishment of protein localization)|go:"GO:0061952"(midbody abscission)|go:"GO:0090543"(Flemming body)|go:"GO:1904888"(cranial skeletal system development)|interpro:IPR022008|interpro:IPR038926|mint:Q53EZ4|rcsb pdb:3E1R|rcsb pdb:3WUT|rcsb pdb:3WUU|rcsb pdb:3WUV|go:"GO:0005814"(centriole)|ensembl:ENSP00000360540|dip:DIP-44581N|entrezgene/locuslink:55165(identity) go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|interpro:IPR000219("Dbl homology (DH) domain")|interpro:IPR035899|entrezgene/locuslink:22899(identity) intact:EBI-16434808(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tuo36vVb8ZgPDR81YjZFNEg559w9606 rogid:g+l8vXDSIS++OznFBOdMJnkI30Q9606 rigid:xMFhNM1fWEHcAnUpz3DL9m6rQrk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P41212 uniprotkb:O15169 intact:EBI-1372759|uniprotkb:A3QVP6|uniprotkb:Q9UMF6|uniprotkb:Q9UMF7|uniprotkb:Q9UMG0|uniprotkb:A8K076|ensembl:ENSP00000379658 intact:EBI-710484|uniprotkb:Q4TT26|uniprotkb:Q4TT27|ensembl:ENSP00000262320|uniprotkb:Q86YA7|uniprotkb:Q8WVW6|uniprotkb:Q96S28 psi-mi:etv6_human(display_long)|uniprotkb:ETS translocation variant 6(gene name synonym)|uniprotkb:ETS-related protein Tel1(gene name synonym)|uniprotkb:ETV6(gene name)|psi-mi:ETV6(display_short)|uniprotkb:TEL(gene name synonym)|uniprotkb:TEL1(gene name synonym) psi-mi:axin1_human(display_long)|uniprotkb:Axis inhibition protein 1(gene name synonym)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:AXIN(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464414 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001978.1|dip:DIP-17028N|ensembl:ENSG00000139083(gene)|ensembl:ENST00000396373(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007296"(vitellogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0022008"(neurogenesis)|go:"GO:0030154"(cell differentiation)|go:"GO:0071425"(hematopoietic stem cell proliferation)|go:"GO:0097152"(mesenchymal cell apoptotic process)|interpro:IPR000418(Ets)|rcsb pdb:5L0P|rcsb pdb:7JU2|rcsb pdb:7N1O|rcsb pdb:7N2B|reactome:R-HSA-9673768|reactome:R-HSA-9703465|interpro:IPR003118(Sterile alpha motif/pointed)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR036388|interpro:IPR036390|mint:P41212|rcsb pdb:1JI7|rcsb pdb:1LKY|rcsb pdb:2DAO|rcsb pdb:2QAR|rcsb pdb:2QB0|rcsb pdb:2QB1|entrezgene/locuslink:2120(identity) refseq:NP_003493.1|refseq:NP_851393.1|ensembl:ENSG00000103126(gene)|ensembl:ENST00000262320(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0010800"(positive regulation of peptidyl-threonine phosphorylation)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034622"|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046332"(SMAD binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051443"(positive regulation of ubiquitin-protein transferase activity)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:0070411"(I-SMAD binding)|go:"GO:0071944"(cell periphery)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:2000060"(positive regulation of ubiquitin-dependent protein catabolic process)|interpro:IPR001158(DIX)|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR029797|interpro:IPR032101|interpro:IPR036305|interpro:IPR038207|interpro:IPR043581|mint:O15169|rcsb pdb:1DK8|rcsb pdb:1EMU|rcsb pdb:1O9U|rcsb pdb:3ZDI|rcsb pdb:4B7T|rcsb pdb:4NM0|rcsb pdb:4NM3|rcsb pdb:4NM5|rcsb pdb:4NM7|rcsb pdb:4NU1|rcsb pdb:5WZZ|rcsb pdb:6JCK|reactome:R-HSA-195253|reactome:R-HSA-196299|reactome:R-HSA-201681|reactome:R-HSA-4641257|reactome:R-HSA-4641262|reactome:R-HSA-5339716|reactome:R-HSA-5358747|reactome:R-HSA-5358749|reactome:R-HSA-5358751|reactome:R-HSA-5358752|reactome:R-HSA-5467337|reactome:R-HSA-5467340|reactome:R-HSA-5467348|reactome:R-HSA-5689880|reactome:R-HSA-8931987|reactome:R-HSA-8939256|reactome:R-HSA-9018519|dip:DIP-34630N|entrezgene/locuslink:8312(identity) intact:EBI-16430351(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ekItHLbEk2Expb+mR7jHa6dPBo89606 rogid:uO+LxY/7ibIZqdd5onbfXqGAZeo9606 rigid:Up2GwGxvAWYZ3lN0ev9SV/BX8vA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H257-2 uniprotkb:A0A0S2Z4M1 intact:EBI-11530605|ensembl:ENSP00000360799 intact:EBI-16429430 psi-mi:q9h257-2(display_long)|uniprotkb:CARD9(gene name)|psi-mi:CARD9(display_short) psi-mi:a0a0s2z4m1_human(display_long)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:Axis inhibition protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464430 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751319(isoform-parent)|uniprotkb:Q9H257-2(isoform-parent)|ensembl:ENSG00000187796(gene)|ensembl:ENST00000371734(transcript)|entrezgene/locuslink:64170(identity) go:"GO:0005634"(nucleus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|interpro:IPR038207|interpro:IPR029797|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR032101|interpro:IPR001158(DIX)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR036305|interpro:IPR043581|entrezgene/locuslink:8312(identity) intact:EBI-16435952(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZXH7B3K5NAzF1LZaeK50ciH1RTE9606 rogid:a88vM0ThHyb/x1DAIHx9I86ppFk9606 rigid:p5u4NP8iUvjq1AqyH2ZFVedYWZc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14596-2 uniprotkb:O15169 intact:EBI-11081753|ensembl:ENSP00000467816 intact:EBI-710484|uniprotkb:Q4TT26|uniprotkb:Q4TT27|ensembl:ENSP00000262320|uniprotkb:Q86YA7|uniprotkb:Q8WVW6|uniprotkb:Q96S28 psi-mi:q14596-2(display_long)|uniprotkb:NBR1(gene name)|psi-mi:NBR1(display_short)|uniprotkb:1A13B(gene name synonym)|uniprotkb:Cell migration-inducing gene 19 protein(gene name synonym)|uniprotkb:KIAA0049(gene name synonym)|uniprotkb:M17S2(gene name synonym)|uniprotkb:Membrane component chromosome 17 surface marker 2(gene name synonym)|uniprotkb:Neighbor of BRCA1 gene 1 protein(gene name synonym)|uniprotkb:Protein 1A1-3B(gene name synonym)|uniprotkb:MIG19(orf name) psi-mi:axin1_human(display_long)|uniprotkb:Axis inhibition protein 1(gene name synonym)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:AXIN(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464446 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-742698(isoform-parent)|ensembl:ENSG00000188554(gene)|ensembl:ENST00000589872(transcript)|uniprotkb:Q14596-2(isoform-parent)|entrezgene/locuslink:4077(identity) refseq:NP_003493.1|refseq:NP_851393.1|ensembl:ENSG00000103126(gene)|ensembl:ENST00000262320(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0010800"(positive regulation of peptidyl-threonine phosphorylation)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034622"|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046332"(SMAD binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051443"(positive regulation of ubiquitin-protein transferase activity)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:0070411"(I-SMAD binding)|go:"GO:0071944"(cell periphery)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:2000060"(positive regulation of ubiquitin-dependent protein catabolic process)|interpro:IPR001158(DIX)|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR029797|interpro:IPR032101|interpro:IPR036305|interpro:IPR038207|interpro:IPR043581|mint:O15169|rcsb pdb:1DK8|rcsb pdb:1EMU|rcsb pdb:1O9U|rcsb pdb:3ZDI|rcsb pdb:4B7T|rcsb pdb:4NM0|rcsb pdb:4NM3|rcsb pdb:4NM5|rcsb pdb:4NM7|rcsb pdb:4NU1|rcsb pdb:5WZZ|rcsb pdb:6JCK|reactome:R-HSA-195253|reactome:R-HSA-196299|reactome:R-HSA-201681|reactome:R-HSA-4641257|reactome:R-HSA-4641262|reactome:R-HSA-5339716|reactome:R-HSA-5358747|reactome:R-HSA-5358749|reactome:R-HSA-5358751|reactome:R-HSA-5358752|reactome:R-HSA-5467337|reactome:R-HSA-5467340|reactome:R-HSA-5467348|reactome:R-HSA-5689880|reactome:R-HSA-8931987|reactome:R-HSA-8939256|reactome:R-HSA-9018519|dip:DIP-34630N|entrezgene/locuslink:8312(identity) intact:EBI-16437295(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:KrZKoabpN1yOvD3Bt6+CCN9Wv5g9606 rogid:uO+LxY/7ibIZqdd5onbfXqGAZeo9606 rigid:kRH7pDWAN2cnIuUQGo5+hm9S0kU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96C92-2 uniprotkb:O15169 intact:EBI-10178036|ensembl:ENSP00000298537 intact:EBI-710484|uniprotkb:Q4TT26|uniprotkb:Q4TT27|ensembl:ENSP00000262320|uniprotkb:Q86YA7|uniprotkb:Q8WVW6|uniprotkb:Q96S28 psi-mi:q96c92-2(display_long)|uniprotkb:ENTR1(gene name)|psi-mi:ENTR1(display_short)|uniprotkb:Antigen NY-CO-3(gene name synonym)|uniprotkb:SDCCAG3(gene name synonym)|uniprotkb:Serologically defined colon cancer antigen 3(gene name synonym) psi-mi:axin1_human(display_long)|uniprotkb:Axis inhibition protein 1(gene name synonym)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:AXIN(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464462 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165689(gene)|ensembl:ENST00000298537(transcript)|intact:EBI-717093(isoform-parent)|uniprotkb:Q96C92-2(isoform-parent)|entrezgene/locuslink:10807(identity) refseq:NP_003493.1|refseq:NP_851393.1|ensembl:ENSG00000103126(gene)|ensembl:ENST00000262320(transcript)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0010800"(positive regulation of peptidyl-threonine phosphorylation)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0016328"(lateral plasma membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034622"|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046332"(SMAD binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051443"(positive regulation of ubiquitin-protein transferase activity)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0070016"(armadillo repeat domain binding)|go:"GO:0070411"(I-SMAD binding)|go:"GO:0071944"(cell periphery)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:2000060"(positive regulation of ubiquitin-dependent protein catabolic process)|interpro:IPR001158(DIX)|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR029797|interpro:IPR032101|interpro:IPR036305|interpro:IPR038207|interpro:IPR043581|mint:O15169|rcsb pdb:1DK8|rcsb pdb:1EMU|rcsb pdb:1O9U|rcsb pdb:3ZDI|rcsb pdb:4B7T|rcsb pdb:4NM0|rcsb pdb:4NM3|rcsb pdb:4NM5|rcsb pdb:4NM7|rcsb pdb:4NU1|rcsb pdb:5WZZ|rcsb pdb:6JCK|reactome:R-HSA-195253|reactome:R-HSA-196299|reactome:R-HSA-201681|reactome:R-HSA-4641257|reactome:R-HSA-4641262|reactome:R-HSA-5339716|reactome:R-HSA-5358747|reactome:R-HSA-5358749|reactome:R-HSA-5358751|reactome:R-HSA-5358752|reactome:R-HSA-5467337|reactome:R-HSA-5467340|reactome:R-HSA-5467348|reactome:R-HSA-5689880|reactome:R-HSA-8931987|reactome:R-HSA-8939256|reactome:R-HSA-9018519|dip:DIP-34630N|entrezgene/locuslink:8312(identity) intact:EBI-16437475(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:U/LI/NOqf74lz75tLcsSMQJAAnE9606 rogid:uO+LxY/7ibIZqdd5onbfXqGAZeo9606 rigid:HVECZLCPSZg03L8BOjsYWr56/IY true sufficient binding region:59-412 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96K21-3 uniprotkb:A0A0S2Z4M1 intact:EBI-10187928|ensembl:ENSP00000299173 intact:EBI-16429430 psi-mi:q96k21-3(display_long)|uniprotkb:ZFYVE19(gene name)|psi-mi:ZFYVE19(display_short)|uniprotkb:ANCHR(gene name synonym)|uniprotkb:MLL partner containing FYVE domain(gene name synonym)|uniprotkb:MPFYVE(gene name synonym)|uniprotkb:Zinc finger FYVE domain-containing protein 19(gene name synonym) psi-mi:a0a0s2z4m1_human(display_long)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:Axis inhibition protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464481 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166140(gene)|ensembl:ENST00000299173(transcript)|intact:EBI-6448240(isoform-parent)|entrezgene/locuslink:84936(identity) go:"GO:0005634"(nucleus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|interpro:IPR038207|interpro:IPR029797|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR032101|interpro:IPR001158(DIX)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR036305|interpro:IPR043581|entrezgene/locuslink:8312(identity) intact:EBI-16439174(see-also) isoform-comment:No experimental confirmation available. Contains a phosphoserine at position 286. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9uSIHmzDgn4qCPE8iSmYVruIUgY9606 rogid:a88vM0ThHyb/x1DAIHx9I86ppFk9606 rigid:F/6xO2n3U5i58emI0+yzmjvOSY0 true sufficient binding region:76-403 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12933 uniprotkb:A0A0S2Z4M1 intact:EBI-355744|uniprotkb:Q96NT2|uniprotkb:A8K107|uniprotkb:B4DPJ7|uniprotkb:Q7Z337|intact:EBI-1046651|ensembl:ENSP00000247668 intact:EBI-16429430 psi-mi:traf2_human(display_long)|uniprotkb:TRAF2(gene name)|psi-mi:TRAF2(display_short)|uniprotkb:TRAP3(gene name synonym)|uniprotkb:Tumor necrosis factor type 2 receptor-associated protein 3(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRAF2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRAF2(gene name synonym) psi-mi:a0a0s2z4m1_human(display_long)|uniprotkb:AXIN1(gene name)|psi-mi:AXIN1(display_short)|uniprotkb:Axis inhibition protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464500 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_066961.2|refseq:XP_011517279.1|refseq:XP_011517280.1|refseq:XP_011517276.1|refseq:XP_011517277.1|refseq:XP_011517278.1|ensembl:ENSG00000127191(gene)|ensembl:ENST00000247668(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0002637"(regulation of immunoglobulin production)|go:"GO:0002726"(positive regulation of T cell cytokine production)|go:"GO:0002947"(tumor necrosis factor receptor superfamily complex)|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043507"(positive regulation of JUN kinase activity)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045121"(membrane raft)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046625"(sphingolipid binding)|go:"GO:0048255"(mRNA stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0097057"(TRAF2-GSTP1 complex)|go:"GO:0097300"(programmed necrotic cell death)|go:"GO:0097400"(interleukin-17-mediated signaling pathway)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1903265"(positive regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990604"(IRE1-TRAF2-ASK1 complex)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005174"(CD40 receptor binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0007165"(signal transduction)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0023019"(signal transduction involved in regulation of gene expression)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031435"(mitogen-activated protein kinase kinase kinase binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0032743"(positive regulation of interleukin-2 production)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034351"(negative regulation of glial cell apoptotic process)|go:"GO:0034622"|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035631"(CD40 receptor complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043120"(tumor necrosis factor binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027133|interpro:IPR032070|interpro:IPR037305|interpro:IPR043211|mint:Q12933|rcsb pdb:1CA4|rcsb pdb:1CA9|rcsb pdb:1CZY|rcsb pdb:1CZZ|rcsb pdb:1D00|rcsb pdb:1D01|rcsb pdb:1D0A|rcsb pdb:1D0J|rcsb pdb:1F3V|rcsb pdb:1QSC|rcsb pdb:3KNV|rcsb pdb:3M06|rcsb pdb:3M0A|rcsb pdb:3M0D|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-5357786|reactome:R-HSA-5357905|reactome:R-HSA-5357956|reactome:R-HSA-5668541|reactome:R-HSA-5675482|reactome:R-HSA-5676594|reactome:R-HSA-5689880|reactome:R-HSA-69416|reactome:R-HSA-75893|reactome:R-HSA-933541|reactome:R-HSA-933542|reactome:R-HSA-9693928|refseq:XP_016870584.1|dip:DIP-6223N|entrezgene/locuslink:7186(identity) go:"GO:0005634"(nucleus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008013"(beta-catenin binding)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030877"(beta-catenin destruction complex)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|interpro:IPR038207|interpro:IPR029797|interpro:IPR014936(Axin beta-catenin binding)|interpro:IPR032101|interpro:IPR001158(DIX)|interpro:IPR016137(Regulator of G protein signalling superfamily)|interpro:IPR024066|interpro:IPR029071|interpro:IPR036305|interpro:IPR043581|entrezgene/locuslink:8312(identity) intact:EBI-16440624(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JhaoM5kRLh3zwhXr+BsCCRNOYa09606 rogid:a88vM0ThHyb/x1DAIHx9I86ppFk9606 rigid:EWPqB4NXOGu6G8E/SIvjn/vUBRk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z3F5 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16464516 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z3f5_human(display_long)|uniprotkb:BAG1(gene name)|psi-mi:BAG1(display_short)|uniprotkb:hCG_30265(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464519 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0051087"(chaperone binding)|interpro:IPR029071|interpro:IPR017093(Molecular chaperone regulator BAG-1)|interpro:IPR039773|entrezgene/locuslink:573(identity) intact:EBI-16429885(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:gGnYMRMOEGnL3NKQfvuAHRMvIS49606 rigid:T833yVID2/ZZX1lu8rLm1fK2fpI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P11142 uniprotkb:A0A0S2Z3F5 intact:EBI-351896|uniprotkb:Q9H3R6|ensembl:ENSP00000227378|ensembl:ENSP00000432083|ensembl:ENSP00000437125 intact:EBI-16464516 psi-mi:hsp7c_human(display_long)|uniprotkb:HSPA8(gene name)|psi-mi:HSPA8(display_short)|uniprotkb:HSC70(gene name synonym)|uniprotkb:HSP73(gene name synonym)|uniprotkb:HSPA10(gene name synonym)|uniprotkb:Heat shock 70 kDa protein 8(gene name synonym)|uniprotkb:Lipopolysaccharide-associated protein 1(gene name synonym) psi-mi:a0a0s2z3f5_human(display_long)|uniprotkb:BAG1(gene name)|psi-mi:BAG1(display_short)|uniprotkb:hCG_30265(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464535 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006588.1|refseq:NP_694881.1|refseq:XP_011541100.1|ensembl:ENSG00000109971(gene)|ensembl:ENST00000227378(transcript)|ensembl:ENST00000532636(transcript)|ensembl:ENST00000534624(transcript)|go:"GO:0000974"(Prp19 complex)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005764"(lysosome)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006457"(protein folding)|go:"GO:0006986"(response to unfolded protein)|go:"GO:0008380"(RNA splicing)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0016020"(membrane)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0023026"(MHC class II protein complex binding)|go:"GO:0030425"(dendrite)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0034774"(secretory granule lumen)|go:"GO:0042026"(protein refolding)|go:"GO:0042470"(melanosome)|go:"GO:0005925"(focal adhesion)|go:"GO:0043195"(terminal bouton)|go:"GO:0043202"(lysosomal lumen)|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0044829"(positive regulation by host of viral genome replication)|go:"GO:0045296"(cadherin binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0048026"(positive regulation of mRNA splicing, via spliceosome)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0055131"(C3HC4-type RING finger domain binding)|go:"GO:0061024"(membrane organization)|go:"GO:0061202"(clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane)|go:"GO:0061635"(regulation of protein complex stability)|go:"GO:0061684"(chaperone-mediated autophagy)|go:"GO:0061738"(late endosomal microautophagy)|go:"GO:0061740"(protein targeting to lysosome involved in chaperone-mediated autophagy)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072562"(blood microparticle)|go:"GO:0098575"(lumenal side of lysosomal membrane)|go:"GO:0098684"(photoreceptor ribbon synapse)|go:"GO:0098690"(glycinergic synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099175"(regulation of postsynapse organization)|go:"GO:0099523"(presynaptic cytosol)|go:"GO:0099524"(postsynaptic cytosol)|go:"GO:0099634"(postsynaptic specialization membrane)|go:"GO:0101031"(chaperone complex)|go:"GO:0140545"(protein disaggregase activity)|go:"GO:0140597"(protein carrier chaperone)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902904"(negative regulation of supramolecular fiber organization)|go:"GO:1904589"(regulation of protein import)|go:"GO:1904764"(chaperone-mediated autophagy translocation complex disassembly)|go:"GO:1904813"(ficolin-1-rich granule lumen)|go:"GO:1990832"(slow axonal transport)|go:"GO:1990833"(clathrin-uncoating ATPase activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|interpro:IPR043129|mint:P11142|rcsb pdb:3AGY|rcsb pdb:3AGZ|rcsb pdb:3ESK|rcsb pdb:3FZF|rcsb pdb:3FZH|rcsb pdb:3FZK|rcsb pdb:3FZL|rcsb pdb:3FZM|rcsb pdb:3LDQ|rcsb pdb:3M3Z|rcsb pdb:4H5N|rcsb pdb:4H5R|rcsb pdb:4H5T|rcsb pdb:4H5V|rcsb pdb:4H5W|rcsb pdb:4HWI|rcsb pdb:4KBQ|rcsb pdb:5AQF|rcsb pdb:5AQG|rcsb pdb:5AQH|rcsb pdb:5AQI|rcsb pdb:5AQJ|rcsb pdb:5AQK|rcsb pdb:5AQL|rcsb pdb:5AQM|rcsb pdb:5AQN|rcsb pdb:5AQO|rcsb pdb:5AQP|rcsb pdb:5AQQ|rcsb pdb:5AQR|rcsb pdb:5AQS|rcsb pdb:5AQT|rcsb pdb:5AQU|rcsb pdb:5AQV|rcsb pdb:6B1I|rcsb pdb:6B1M|rcsb pdb:6B1N|rcsb pdb:6ZYJ|reactome:R-HSA-3371453|reactome:R-HSA-3371497|reactome:R-HSA-3371568|reactome:R-HSA-3371571|reactome:R-HSA-432720|reactome:R-HSA-432722|reactome:R-HSA-447041|reactome:R-HSA-450408|reactome:R-HSA-6785807|reactome:R-HSA-6798695|reactome:R-HSA-72163|reactome:R-HSA-8856828|reactome:R-HSA-8876725|reactome:R-HSA-888590|reactome:R-HSA-9613354|reactome:R-HSA-9613829|reactome:R-HSA-9615710|dip:DIP-32874N|entrezgene/locuslink:3312(identity) go:"GO:0051087"(chaperone binding)|interpro:IPR029071|interpro:IPR017093(Molecular chaperone regulator BAG-1)|interpro:IPR039773|entrezgene/locuslink:573(identity) intact:EBI-16435304(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:0I+wYut3naJRzzgmMSax/1mZZwA9606 rogid:gGnYMRMOEGnL3NKQfvuAHRMvIS49606 rigid:oe9lFbF+bMDhuR65mxgXnhpm/8A true sufficient binding region:61-646 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96LI6 uniprotkb:E9PJI6 intact:EBI-3957665|uniprotkb:Q17RC0|uniprotkb:Q7Z4L8|uniprotkb:Q9BZA2|uniprotkb:Q9BZA3|ensembl:ENSP00000303599|ensembl:ENSP00000306549 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:hsfy1_human(display_long)|uniprotkb:HSFY1(gene name)|psi-mi:HSFY1(display_short)|uniprotkb:HSFY2(gene name)|psi-mi:HSFY2(display_short)|uniprotkb:HSF2L(gene name synonym)|uniprotkb:HSFY(gene name synonym)|uniprotkb:Heat shock transcription factor 2-like protein(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464554 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001001877.1|refseq:NP_149099.2|refseq:NP_689797.1|refseq:NP_714927.1|ensembl:ENSG00000169953(gene)|ensembl:ENSG00000172468(gene)|ensembl:ENST00000304790(transcript)|ensembl:ENST00000307393(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000232("Heat shock factor (HSF)-type, DNA-binding")|interpro:IPR027725|interpro:IPR027730|interpro:IPR036388|interpro:IPR036390|refseq:XP_016885520.1|entrezgene/locuslink:86614(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16429303(see-also)|intact:EBI-16429320(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:grGh9Q0MUaspNXflIH6A5orHPEs9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:Riu0x0QOlmHVjtKcbfq0kNfFqfs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96LI6 intact:EBI-16431359 intact:EBI-3957665|uniprotkb:Q17RC0|uniprotkb:Q7Z4L8|uniprotkb:Q9BZA2|uniprotkb:Q9BZA3|ensembl:ENSP00000303599|ensembl:ENSP00000306549 - psi-mi:hsfy1_human(display_long)|uniprotkb:HSFY1(gene name)|psi-mi:HSFY1(display_short)|uniprotkb:HSFY2(gene name)|psi-mi:HSFY2(display_short)|uniprotkb:HSF2L(gene name synonym)|uniprotkb:HSFY(gene name synonym)|uniprotkb:Heat shock transcription factor 2-like protein(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464571 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001001877.1|refseq:NP_149099.2|refseq:NP_689797.1|refseq:NP_714927.1|ensembl:ENSG00000169953(gene)|ensembl:ENSG00000172468(gene)|ensembl:ENST00000304790(transcript)|ensembl:ENST00000307393(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000232("Heat shock factor (HSF)-type, DNA-binding")|interpro:IPR027725|interpro:IPR027730|interpro:IPR036388|interpro:IPR036390|refseq:XP_016885520.1|entrezgene/locuslink:86614(identity) entrezgene/locuslink:54971(identity) intact:EBI-16429303(see-also)|intact:EBI-16429320(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:grGh9Q0MUaspNXflIH6A5orHPEs9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:0AsA1HYSt8wxzPgsWXtUDNKLQ5k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96LI6 uniprotkb:A0A0S2Z5G4 intact:EBI-3957665|uniprotkb:Q17RC0|uniprotkb:Q7Z4L8|uniprotkb:Q9BZA2|uniprotkb:Q9BZA3|ensembl:ENSP00000303599|ensembl:ENSP00000306549 intact:EBI-16429704 psi-mi:hsfy1_human(display_long)|uniprotkb:HSFY1(gene name)|psi-mi:HSFY1(display_short)|uniprotkb:HSFY2(gene name)|psi-mi:HSFY2(display_short)|uniprotkb:HSF2L(gene name synonym)|uniprotkb:HSFY(gene name synonym)|uniprotkb:Heat shock transcription factor 2-like protein(gene name synonym) psi-mi:a0a0s2z5g4_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464588 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001001877.1|refseq:NP_149099.2|refseq:NP_689797.1|refseq:NP_714927.1|ensembl:ENSG00000169953(gene)|ensembl:ENSG00000172468(gene)|ensembl:ENST00000304790(transcript)|ensembl:ENST00000307393(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000232("Heat shock factor (HSF)-type, DNA-binding")|interpro:IPR027725|interpro:IPR027730|interpro:IPR036388|interpro:IPR036390|refseq:XP_016885520.1|entrezgene/locuslink:86614(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:XP_016878869.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16429303(see-also)|intact:EBI-16429320(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_7 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:grGh9Q0MUaspNXflIH6A5orHPEs9606 rogid:B3CbJKL7yJtM34eeaCkXyqqisnQ9606 rigid:54sfxAW+hFPcqDNjvDPKm3ecPak true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 uniprotkb:E9PJI6 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464605 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16429710(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:p30fRFIYCMlacTWa9gRsmYqWS6k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 intact:EBI-16431359 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 - psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464621 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) entrezgene/locuslink:54971(identity) intact:EBI-16429710(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:FEqP6w0nijw+nAuN7FKTxG6NQHA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 uniprotkb:Q8N9N5-7 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 intact:EBI-16429296|ensembl:ENSP00000444352 psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:q8n9n5-7(display_long)|uniprotkb:BEN domain-containing protein 1(gene name synonym)|uniprotkb:Btg3-associated nuclear protein(gene name synonym)|uniprotkb:Scaffold/matrix-associated region-1-binding protein(gene name synonym)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short)|uniprotkb:BEND1(gene name synonym)|uniprotkb:SMAR1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464637 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000538234(transcript)|intact:EBI-744695(isoform-parent)|entrezgene/locuslink:54971(identity) intact:EBI-16429710(see-also) - isoform-comment:No experimental confirmation available. comment:"Evidence for isoform CCSB isoform ID: BANP_4 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:t2jbYP8LrjN6XFcera/qV+cHUNg9606 rigid:lo+yzkwx10cVCUSMrRozAnN7R4Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z3K3 uniprotkb:E9PJI6 intact:EBI-1389308|uniprotkb:O75049|uniprotkb:Q5SZS2|uniprotkb:Q5SZS3|uniprotkb:Q5SZS4|uniprotkb:Q8TDZ7|uniprotkb:Q9Y4X7|uniprotkb:Q3LIC4|uniprotkb:Q5SZS1|intact:EBI-2560449|intact:EBI-11742841|uniprotkb:B4DTP8|uniprotkb:B4DYL9|uniprotkb:B7ZBY5|uniprotkb:E9PM80|intact:EBI-14072025|intact:EBI-17205119|intact:EBI-22321456|intact:EBI-12748249|intact:EBI-16429759|ensembl:ENSP00000271715 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:pogz_human(display_long)|uniprotkb:POGZ(gene name)|psi-mi:POGZ(display_short)|uniprotkb:KIAA0461(gene name synonym)|uniprotkb:Nbla00003(orf name)|uniprotkb:SUHW5(gene name synonym)|uniprotkb:ZNF280E(gene name synonym)|uniprotkb:ZNF635(gene name synonym)|uniprotkb:Suppressor of hairy wing homolog 5(gene name synonym)|uniprotkb:Zinc finger protein 280E(gene name synonym)|uniprotkb:Zinc finger protein 635(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464653 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001181866.1|refseq:NP_001181867.1|refseq:NP_055915.2|refseq:NP_665739.3|refseq:NP_997054.1|refseq:XP_016856234.1|refseq:XP_016856235.1|refseq:XP_016856237.1|refseq:XP_016856238.1|refseq:XP_005245056.1|refseq:XP_005245057.1|refseq:XP_005245058.1|refseq:XP_005245062.1|refseq:XP_005245063.1|dip:DIP-38044N|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007064"(mitotic sister chromatid cohesion)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|ensembl:ENSG00000143442(gene)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|ensembl:ENST00000271715(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0051382"(kinetochore assembly)|interpro:IPR004875(CENP-B protein)|interpro:IPR006600(Centromere protein B, helix-turn-helix)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|mint:Q7Z3K3|rcsb pdb:2E72|rcsb pdb:2N3A|rcsb pdb:6EMP|entrezgene/locuslink:23126(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16429761(see-also)|intact:EBI-16429771(see-also)|intact:EBI-16429781(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:sCOIY8KsHRQtfcoSA9Tixl9yIsc9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:bFzMxsTxvIvA0ZIpzqnUmIe6GSc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96QF0-7 uniprotkb:E9PJI6 intact:EBI-11984839|ensembl:ENSP00000368092 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:q96qf0-7(display_long)|uniprotkb:RAB3IP(gene name)|psi-mi:RAB3IP(display_short)|uniprotkb:RABIN8(gene name synonym)|uniprotkb:Rabin-3(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464689 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96QF0-7(isoform-parent)|intact:EBI-747844(isoform-parent)|ensembl:ENSG00000127328(gene)|ensembl:ENST00000378815(transcript)|entrezgene/locuslink:117177(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16429803(see-also)|intact:EBI-16429813(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AbUJj24KJUXc9MOj/FSx+ogmdfI9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:qVwxbL/qtc1gHwsI0/sInluUTQY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z3K3 intact:EBI-16431359 intact:EBI-1389308|uniprotkb:O75049|uniprotkb:Q5SZS2|uniprotkb:Q5SZS3|uniprotkb:Q5SZS4|uniprotkb:Q8TDZ7|uniprotkb:Q9Y4X7|uniprotkb:Q3LIC4|uniprotkb:Q5SZS1|intact:EBI-2560449|intact:EBI-11742841|uniprotkb:B4DTP8|uniprotkb:B4DYL9|uniprotkb:B7ZBY5|uniprotkb:E9PM80|intact:EBI-14072025|intact:EBI-17205119|intact:EBI-22321456|intact:EBI-12748249|intact:EBI-16429759|ensembl:ENSP00000271715 - psi-mi:pogz_human(display_long)|uniprotkb:POGZ(gene name)|psi-mi:POGZ(display_short)|uniprotkb:KIAA0461(gene name synonym)|uniprotkb:Nbla00003(orf name)|uniprotkb:SUHW5(gene name synonym)|uniprotkb:ZNF280E(gene name synonym)|uniprotkb:ZNF635(gene name synonym)|uniprotkb:Suppressor of hairy wing homolog 5(gene name synonym)|uniprotkb:Zinc finger protein 280E(gene name synonym)|uniprotkb:Zinc finger protein 635(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464671 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001181866.1|refseq:NP_001181867.1|refseq:NP_055915.2|refseq:NP_665739.3|refseq:NP_997054.1|refseq:XP_016856234.1|refseq:XP_016856235.1|refseq:XP_016856237.1|refseq:XP_016856238.1|refseq:XP_005245056.1|refseq:XP_005245057.1|refseq:XP_005245058.1|refseq:XP_005245062.1|refseq:XP_005245063.1|dip:DIP-38044N|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007064"(mitotic sister chromatid cohesion)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|ensembl:ENSG00000143442(gene)|go:"GO:0046872"(metal ion binding)|go:"GO:0051301"(cell division)|ensembl:ENST00000271715(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0051382"(kinetochore assembly)|interpro:IPR004875(CENP-B protein)|interpro:IPR006600(Centromere protein B, helix-turn-helix)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|mint:Q7Z3K3|rcsb pdb:2E72|rcsb pdb:2N3A|rcsb pdb:6EMP|entrezgene/locuslink:23126(identity) entrezgene/locuslink:54971(identity) intact:EBI-16429761(see-also)|intact:EBI-16429771(see-also)|intact:EBI-16429781(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:sCOIY8KsHRQtfcoSA9Tixl9yIsc9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:ii6NNBDdNySCT3D570TmdMrBs0w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050-2 uniprotkb:E9PJI6 intact:EBI-5237510|ensembl:ENSP00000354492 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:q08050-2(display_long)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:FOXM1-b(isoform synonym)|uniprotkb:FoxM1B(isoform synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465007 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-866480(isoform-parent)|ensembl:ENSG00000111206(gene)|ensembl:ENST00000361953(transcript)|entrezgene/locuslink:2305(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16434868(see-also)|intact:EBI-16434905(see-also)|intact:EBI-16434915(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OErBT+uyHfgzDn6xI1OC8CATC049606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:ClJeMYYas/DLNOW6abFOHNGUUl8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BUZ4 intact:EBI-16431359 intact:EBI-3650647|uniprotkb:O75615|uniprotkb:Q14848|uniprotkb:Q2KJU4|uniprotkb:Q2PJN8|ensembl:ENSP00000262395 - psi-mi:traf4_human(display_long)|uniprotkb:TRAF4(gene name)|psi-mi:TRAF4(display_short)|uniprotkb:CART1(gene name synonym)|uniprotkb:MLN62(gene name synonym)|uniprotkb:RNF83(gene name synonym)|uniprotkb:Cysteine-rich domain associated with RING and Traf domains protein 1(gene name synonym)|uniprotkb:Metastatic lymph node gene 62 protein(gene name synonym)|uniprotkb:RING finger protein 83(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464988 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004286.2|dip:DIP-40910N|ensembl:ENSG00000076604(gene)|ensembl:ENST00000262395(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006915"(apoptotic process)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0007585"(respiratory gaseous exchange by respiratory system)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030323"(respiratory tube development)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050699"(WW domain binding)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027138|interpro:IPR037307|interpro:IPR043211|mint:Q9BUZ4|rcsb pdb:2EOD|rcsb pdb:2YUC|rcsb pdb:3ZJB|rcsb pdb:4K8U|rcsb pdb:4M4E|rcsb pdb:5YC1|entrezgene/locuslink:9618(identity) entrezgene/locuslink:54971(identity) intact:EBI-16433516(see-also)|intact:EBI-16433526(see-also)|intact:EBI-16433536(see-also)|intact:EBI-16433546(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Bjl/NCcleyKgZb7suHw3AVWpG09606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:1iZBVaBf2RHTlnMFCcxEhlhqYko true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BUZ4 uniprotkb:E9PJI6 intact:EBI-3650647|uniprotkb:O75615|uniprotkb:Q14848|uniprotkb:Q2KJU4|uniprotkb:Q2PJN8|ensembl:ENSP00000262395 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:traf4_human(display_long)|uniprotkb:TRAF4(gene name)|psi-mi:TRAF4(display_short)|uniprotkb:CART1(gene name synonym)|uniprotkb:MLN62(gene name synonym)|uniprotkb:RNF83(gene name synonym)|uniprotkb:Cysteine-rich domain associated with RING and Traf domains protein 1(gene name synonym)|uniprotkb:Metastatic lymph node gene 62 protein(gene name synonym)|uniprotkb:RING finger protein 83(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464969 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004286.2|dip:DIP-40910N|ensembl:ENSG00000076604(gene)|ensembl:ENST00000262395(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006915"(apoptotic process)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0007585"(respiratory gaseous exchange by respiratory system)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030323"(respiratory tube development)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050699"(WW domain binding)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027138|interpro:IPR037307|interpro:IPR043211|mint:Q9BUZ4|rcsb pdb:2EOD|rcsb pdb:2YUC|rcsb pdb:3ZJB|rcsb pdb:4K8U|rcsb pdb:4M4E|rcsb pdb:5YC1|entrezgene/locuslink:9618(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16433516(see-also)|intact:EBI-16433526(see-also)|intact:EBI-16433536(see-also)|intact:EBI-16433546(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Bjl/NCcleyKgZb7suHw3AVWpG09606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:8CCbSDS1Vxm+048AznupzQXW3ds true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 intact:EBI-16431359 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 - psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464950 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) entrezgene/locuslink:54971(identity) intact:EBI-16433313(see-also)|intact:EBI-16433323(see-also)|intact:EBI-16433333(see-also)|intact:EBI-16433343(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:C11XXi5gd+6AQlZieuOxrg4LAWs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:E9PJI6 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464931 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16433313(see-also)|intact:EBI-16433323(see-also)|intact:EBI-16433333(see-also)|intact:EBI-16433343(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:tyxCVy+vKP0nDSYB+PgosCXTvtI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5TD97 uniprotkb:A0A0S2Z5G4 intact:EBI-750641|uniprotkb:Q5TD98|uniprotkb:Q8WW21|uniprotkb:Q9NQU2|uniprotkb:B2RBD1|uniprotkb:E1P526|ensembl:ENSP00000326022|ensembl:ENSP00000396390|ensembl:ENSP00000442357 intact:EBI-16429704 psi-mi:fhl5_human(display_long)|uniprotkb:Activator of cAMP-responsive element modulator in testis(gene name synonym)|uniprotkb:FHL5(gene name)|psi-mi:FHL5(display_short)|uniprotkb:ACT(gene name synonym) psi-mi:a0a0s2z5g4_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464915 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001164278.1|refseq:NP_065228.4|refseq:NP_001309395.1|refseq:NP_001309396.1|ensembl:ENSG00000112214(gene)|ensembl:ENST00000326771(transcript)|ensembl:ENST00000450218(transcript)|ensembl:ENST00000541107(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0030018"(Z disc)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|interpro:IPR042947|mint:Q5TD97|rcsb pdb:1X68|entrezgene/locuslink:9457(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:XP_016878869.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16432466(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_7 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AYHIHh+ibS4sNYAZY4ghojZOJOI9606 rogid:B3CbJKL7yJtM34eeaCkXyqqisnQ9606 rigid:f1EpXrYmhkBVEXbnKjXen6vO60g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5TD97 uniprotkb:B4DE54 intact:EBI-750641|uniprotkb:Q5TD98|uniprotkb:Q8WW21|uniprotkb:Q9NQU2|uniprotkb:B2RBD1|uniprotkb:E1P526|ensembl:ENSP00000326022|ensembl:ENSP00000396390|ensembl:ENSP00000442357 intact:EBI-16429313 psi-mi:fhl5_human(display_long)|uniprotkb:Activator of cAMP-responsive element modulator in testis(gene name synonym)|uniprotkb:FHL5(gene name)|psi-mi:FHL5(display_short)|uniprotkb:ACT(gene name synonym) psi-mi:b4de54_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464899 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001164278.1|refseq:NP_065228.4|refseq:NP_001309395.1|refseq:NP_001309396.1|ensembl:ENSG00000112214(gene)|ensembl:ENST00000326771(transcript)|ensembl:ENST00000450218(transcript)|ensembl:ENST00000541107(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0030018"(Z disc)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|interpro:IPR042947|mint:Q5TD97|rcsb pdb:1X68|entrezgene/locuslink:9457(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:NP_001167010.1|refseq:NP_001167013.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16432466(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_5 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AYHIHh+ibS4sNYAZY4ghojZOJOI9606 rogid:B0JdOqrjin6J5XTIC/0dXs6kRyw9606 rigid:QBD3Rqe4ftOZNMVpav4O3bmxrMk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5TD97 intact:EBI-16431359 intact:EBI-750641|uniprotkb:Q5TD98|uniprotkb:Q8WW21|uniprotkb:Q9NQU2|uniprotkb:B2RBD1|uniprotkb:E1P526|ensembl:ENSP00000326022|ensembl:ENSP00000396390|ensembl:ENSP00000442357 - psi-mi:fhl5_human(display_long)|uniprotkb:Activator of cAMP-responsive element modulator in testis(gene name synonym)|uniprotkb:FHL5(gene name)|psi-mi:FHL5(display_short)|uniprotkb:ACT(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464883 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001164278.1|refseq:NP_065228.4|refseq:NP_001309395.1|refseq:NP_001309396.1|ensembl:ENSG00000112214(gene)|ensembl:ENST00000326771(transcript)|ensembl:ENST00000450218(transcript)|ensembl:ENST00000541107(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0030018"(Z disc)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|interpro:IPR042947|mint:Q5TD97|rcsb pdb:1X68|entrezgene/locuslink:9457(identity) entrezgene/locuslink:54971(identity) intact:EBI-16432466(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AYHIHh+ibS4sNYAZY4ghojZOJOI9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:XLlpUR0/1u2hL1cfaiKN/5Hit8c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5TD97 uniprotkb:E9PJI6 intact:EBI-750641|uniprotkb:Q5TD98|uniprotkb:Q8WW21|uniprotkb:Q9NQU2|uniprotkb:B2RBD1|uniprotkb:E1P526|ensembl:ENSP00000326022|ensembl:ENSP00000396390|ensembl:ENSP00000442357 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:fhl5_human(display_long)|uniprotkb:Activator of cAMP-responsive element modulator in testis(gene name synonym)|uniprotkb:FHL5(gene name)|psi-mi:FHL5(display_short)|uniprotkb:ACT(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464867 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001164278.1|refseq:NP_065228.4|refseq:NP_001309395.1|refseq:NP_001309396.1|ensembl:ENSG00000112214(gene)|ensembl:ENST00000326771(transcript)|ensembl:ENST00000450218(transcript)|ensembl:ENST00000541107(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0030018"(Z disc)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|interpro:IPR042947|mint:Q5TD97|rcsb pdb:1X68|entrezgene/locuslink:9457(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16432466(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AYHIHh+ibS4sNYAZY4ghojZOJOI9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:NqMj4Xt9CQGHwNDdHWPPY5E2sLI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:E9PJI6 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464847 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16431349(see-also)|intact:EBI-16431361(see-also)|intact:EBI-16431371(see-also)|intact:EBI-16431381(see-also)|intact:EBI-16431391(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:w3JmXLU7ivVJwtXtIg0LThX7p7s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H2G9 uniprotkb:A0A0S2Z5G4 intact:EBI-2548012|intact:EBI-28986503|ensembl:ENSP00000327541|ensembl:ENSP00000356782|uniprotkb:O15298|uniprotkb:Q5T531|uniprotkb:Q5T533|uniprotkb:Q9GZX4 intact:EBI-16429704 psi-mi:go45_human(display_long)|uniprotkb:BLZF1(gene name)|psi-mi:BLZF1(display_short)|uniprotkb:JEM1(gene name synonym)|uniprotkb:Basic leucine zipper nuclear factor 1(gene name synonym)|uniprotkb:JEM-1(gene name synonym)|uniprotkb:p45 basic leucine-zipper nuclear factor(gene name synonym) psi-mi:a0a0s2z5g4_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464831 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011508394.1|ensembl:ENSG00000117475(gene)|ensembl:ENST00000329281(transcript)|ensembl:ENST00000367808(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007030"(Golgi organization)|go:"GO:0019899"(enzyme binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|interpro:IPR013183(Protein of unknown function DUF1721, fungi)|interpro:IPR027095|mint:Q9H2G9|reactome:R-HSA-162658|refseq:NP_003657.1|ensembl:ENSP00000327541|ensembl:ENST00000367807|ensembl:ENSP00000356781|ensembl:ENSP00000356782|refseq:NP_001307901.1|refseq:NP_001307902.1|entrezgene/locuslink:8548(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:XP_016878869.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16430992(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_7 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FqMAghbeSRbqLmtaKELM5JZ+H3s9606 rogid:B3CbJKL7yJtM34eeaCkXyqqisnQ9606 rigid:qKyzV4pxzBmU3GbxYqtRnVRMXy0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H2G9 intact:EBI-16431359 intact:EBI-2548012|intact:EBI-28986503|ensembl:ENSP00000327541|ensembl:ENSP00000356782|uniprotkb:O15298|uniprotkb:Q5T531|uniprotkb:Q5T533|uniprotkb:Q9GZX4 - psi-mi:go45_human(display_long)|uniprotkb:BLZF1(gene name)|psi-mi:BLZF1(display_short)|uniprotkb:JEM1(gene name synonym)|uniprotkb:Basic leucine zipper nuclear factor 1(gene name synonym)|uniprotkb:JEM-1(gene name synonym)|uniprotkb:p45 basic leucine-zipper nuclear factor(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464815 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011508394.1|ensembl:ENSG00000117475(gene)|ensembl:ENST00000329281(transcript)|ensembl:ENST00000367808(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007030"(Golgi organization)|go:"GO:0019899"(enzyme binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|interpro:IPR013183(Protein of unknown function DUF1721, fungi)|interpro:IPR027095|mint:Q9H2G9|reactome:R-HSA-162658|refseq:NP_003657.1|ensembl:ENSP00000327541|ensembl:ENST00000367807|ensembl:ENSP00000356781|ensembl:ENSP00000356782|refseq:NP_001307901.1|refseq:NP_001307902.1|entrezgene/locuslink:8548(identity) entrezgene/locuslink:54971(identity) intact:EBI-16430992(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FqMAghbeSRbqLmtaKELM5JZ+H3s9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:rkLtDvBC2R7FVyBI2um7pITV6mo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H2G9 uniprotkb:E9PJI6 intact:EBI-2548012|intact:EBI-28986503|ensembl:ENSP00000327541|ensembl:ENSP00000356782|uniprotkb:O15298|uniprotkb:Q5T531|uniprotkb:Q5T533|uniprotkb:Q9GZX4 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:go45_human(display_long)|uniprotkb:BLZF1(gene name)|psi-mi:BLZF1(display_short)|uniprotkb:JEM1(gene name synonym)|uniprotkb:Basic leucine zipper nuclear factor 1(gene name synonym)|uniprotkb:JEM-1(gene name synonym)|uniprotkb:p45 basic leucine-zipper nuclear factor(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464799 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011508394.1|ensembl:ENSG00000117475(gene)|ensembl:ENST00000329281(transcript)|ensembl:ENST00000367808(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007030"(Golgi organization)|go:"GO:0019899"(enzyme binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|interpro:IPR013183(Protein of unknown function DUF1721, fungi)|interpro:IPR027095|mint:Q9H2G9|reactome:R-HSA-162658|refseq:NP_003657.1|ensembl:ENSP00000327541|ensembl:ENST00000367807|ensembl:ENSP00000356781|ensembl:ENSP00000356782|refseq:NP_001307901.1|refseq:NP_001307902.1|entrezgene/locuslink:8548(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16430992(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FqMAghbeSRbqLmtaKELM5JZ+H3s9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:g16T9KXTyDoEEMofKcOSVtZYRzU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TAP6 intact:EBI-16431359 intact:EBI-742887|ensembl:ENSP00000262127|uniprotkb:Q658N5|uniprotkb:Q9H9U7|uniprotkb:B0YJB2|uniprotkb:B4DXG5|uniprotkb:B4DZW1 - psi-mi:cep76_human(display_long)|uniprotkb:CEP76(gene name)|psi-mi:CEP76(display_short)|uniprotkb:C18orf9(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464781 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079175.2|ensembl:ENSG00000101624(gene)|ensembl:ENST00000262127(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046599"(regulation of centriole replication)|interpro:IPR028926|interpro:IPR038765|mint:Q8TAP6|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_001258918.1|entrezgene/locuslink:79959(identity) entrezgene/locuslink:54971(identity) intact:EBI-16430502(see-also)|intact:EBI-16430512(see-also)|intact:EBI-16430522(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fWzb8oIU35oVWomyDrf8u5sbxUk9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:5e1vuQqfY8tSCso7BRxHnZ3FlfE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96QF0-7 intact:EBI-16431359 intact:EBI-11984839|ensembl:ENSP00000368092 - psi-mi:q96qf0-7(display_long)|uniprotkb:RAB3IP(gene name)|psi-mi:RAB3IP(display_short)|uniprotkb:RABIN8(gene name synonym)|uniprotkb:Rabin-3(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464746 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96QF0-7(isoform-parent)|intact:EBI-747844(isoform-parent)|ensembl:ENSG00000127328(gene)|ensembl:ENST00000378815(transcript)|entrezgene/locuslink:117177(identity) entrezgene/locuslink:54971(identity) intact:EBI-16429803(see-also)|intact:EBI-16429813(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AbUJj24KJUXc9MOj/FSx+ogmdfI9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:SEfKTmI2u6xaTU/4ViZu6iZ4zkE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TAP6 uniprotkb:E9PJI6 intact:EBI-742887|ensembl:ENSP00000262127|uniprotkb:Q658N5|uniprotkb:Q9H9U7|uniprotkb:B0YJB2|uniprotkb:B4DXG5|uniprotkb:B4DZW1 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:cep76_human(display_long)|uniprotkb:CEP76(gene name)|psi-mi:CEP76(display_short)|uniprotkb:C18orf9(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16464763 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079175.2|ensembl:ENSG00000101624(gene)|ensembl:ENST00000262127(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046599"(regulation of centriole replication)|interpro:IPR028926|interpro:IPR038765|mint:Q8TAP6|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_001258918.1|entrezgene/locuslink:79959(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16430502(see-also)|intact:EBI-16430512(see-also)|intact:EBI-16430522(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fWzb8oIU35oVWomyDrf8u5sbxUk9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:EmSSswSXRWuu4+7OZJZA2pHyy5o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16440472 intact:EBI-16431359 - - psi-mi:"ccsb orf id: 9576"(display_short)|psi-mi:EBI-16440472(display_long) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465540 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:57573(identity) entrezgene/locuslink:54971(identity) intact:EBI-16440474(see-also)|intact:EBI-16440484(see-also)|intact:EBI-16440494(see-also)|intact:EBI-16440534(see-also)|intact:EBI-16440544(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:x1KdEVhuKo5sZGVPBGE9eyTup9w9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:Kjl4ERNshVBdkbDxPPjV/XO6JZw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6P1W5 intact:EBI-16431359 intact:EBI-946029|uniprotkb:B3KVT1|uniprotkb:Q96IC8|ensembl:ENSP00000435634|uniprotkb:D3DPR3|uniprotkb:E9PJ76 - psi-mi:ca094_human(display_long)|uniprotkb:C1orf94(gene name)|psi-mi:C1orf94(display_short) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465519 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001128206.1|refseq:NP_116273.2|ensembl:ENSG00000142698(gene)|ensembl:ENST00000488417(transcript)|interpro:IPR031496|entrezgene/locuslink:84970(identity) entrezgene/locuslink:54971(identity) intact:EBI-16440388(see-also)|intact:EBI-16440400(see-also)|intact:EBI-16440412(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y1o4xWvTl2CBA1J7jsP7y8ZjLzM9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:EpQQ8lh9BWVISt2FiFU1y/Y7Q0E true sufficient binding region:191-598 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6P1W5 uniprotkb:E9PJI6 intact:EBI-946029|uniprotkb:B3KVT1|uniprotkb:Q96IC8|ensembl:ENSP00000435634|uniprotkb:D3DPR3|uniprotkb:E9PJ76 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:ca094_human(display_long)|uniprotkb:C1orf94(gene name)|psi-mi:C1orf94(display_short) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465498 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001128206.1|refseq:NP_116273.2|ensembl:ENSG00000142698(gene)|ensembl:ENST00000488417(transcript)|interpro:IPR031496|entrezgene/locuslink:84970(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16440388(see-also)|intact:EBI-16440400(see-also)|intact:EBI-16440412(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y1o4xWvTl2CBA1J7jsP7y8ZjLzM9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:CwGh8gLo942BIljrssdHbGHV+Os true sufficient binding region:191-598 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:E9PJI6 intact:EBI-16439278 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465478 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16439329(see-also)|intact:EBI-16439339(see-also)|intact:EBI-16439349(see-also)|intact:EBI-16439359(see-also)|intact:EBI-16439369(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:ZJTXeJaR2kS/7ERGf1hIvT2q9A4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NF64 intact:EBI-16431359 intact:EBI-745786|uniprotkb:O94790|uniprotkb:Q0VGB4|uniprotkb:Q659A8|uniprotkb:Q6JKL5|uniprotkb:Q8WTX8|uniprotkb:Q96Q01|uniprotkb:Q9BQH7|uniprotkb:A4D2K7|uniprotkb:D3DVL1|intact:EBI-28976701|ensembl:ENSP00000311778|ensembl:ENSP00000414723 - psi-mi:zmiz2_human(display_long)|uniprotkb:PIAS-like protein Zimp7(gene name synonym)|uniprotkb:ZMIZ2(gene name)|psi-mi:ZMIZ2(display_short)|uniprotkb:KIAA1886(gene name synonym)|uniprotkb:HRIHFB2007(orf name)|uniprotkb:ZIMP7(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465456 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_113637.3|refseq:NP_777589.2|ensembl:ENST00000265346|ensembl:ENSP00000265346|ensembl:ENSP00000311778|ensembl:ENST00000413916|ensembl:ENSP00000409648|ensembl:ENSP00000414723|refseq:NP_001287888.1|ensembl:ENSG00000122515(gene)|ensembl:ENST00000309315(transcript)|ensembl:ENST00000441627(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0043596"(nuclear replication fork)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048096"|interpro:IPR004181(Zinc finger, MIZ-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|refseq:XP_005249926.1|refseq:XP_005249929.1|entrezgene/locuslink:83637(identity) entrezgene/locuslink:54971(identity) intact:EBI-16439186(see-also)|intact:EBI-16439198(see-also)|intact:EBI-16439210(see-also)|intact:EBI-16439222(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gkO57EyOLACt/8WYxFQbasiqRro9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:SywWL6wJwqVVQ7SwwBjdZ5K+3pU true sufficient binding region:479-920 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NF64 uniprotkb:E9PJI6 intact:EBI-745786|uniprotkb:O94790|uniprotkb:Q0VGB4|uniprotkb:Q659A8|uniprotkb:Q6JKL5|uniprotkb:Q8WTX8|uniprotkb:Q96Q01|uniprotkb:Q9BQH7|uniprotkb:A4D2K7|uniprotkb:D3DVL1|intact:EBI-28976701|ensembl:ENSP00000311778|ensembl:ENSP00000414723 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:zmiz2_human(display_long)|uniprotkb:PIAS-like protein Zimp7(gene name synonym)|uniprotkb:ZMIZ2(gene name)|psi-mi:ZMIZ2(display_short)|uniprotkb:KIAA1886(gene name synonym)|uniprotkb:HRIHFB2007(orf name)|uniprotkb:ZIMP7(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465434 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_113637.3|refseq:NP_777589.2|ensembl:ENST00000265346|ensembl:ENSP00000265346|ensembl:ENSP00000311778|ensembl:ENST00000413916|ensembl:ENSP00000409648|ensembl:ENSP00000414723|refseq:NP_001287888.1|ensembl:ENSG00000122515(gene)|ensembl:ENST00000309315(transcript)|ensembl:ENST00000441627(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0043596"(nuclear replication fork)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048096"|interpro:IPR004181(Zinc finger, MIZ-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|refseq:XP_005249926.1|refseq:XP_005249929.1|entrezgene/locuslink:83637(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16439186(see-also)|intact:EBI-16439198(see-also)|intact:EBI-16439210(see-also)|intact:EBI-16439222(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gkO57EyOLACt/8WYxFQbasiqRro9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:TG6CNLvch64nTfTJklVSe4Eibyw true sufficient binding region:479-920 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HAN9 intact:EBI-16431359 intact:EBI-3917542|uniprotkb:Q8TAE9|uniprotkb:Q9H6B6|uniprotkb:Q9H247|uniprotkb:B1AN63|ensembl:ENSP00000366410|ensembl:ENSP00000435134 - psi-mi:nmna1_human(display_long)|uniprotkb:NMNAT1(gene name)|psi-mi:NMNAT1(display_short)|uniprotkb:NMNAT(gene name synonym)|uniprotkb:Nicotinate-nucleotide adenylyltransferase 1(gene name synonym)|uniprotkb:Nicotinamide-nucleotide adenylyltransferase 1(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465416 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284707.1|refseq:NP_073624.2|ensembl:ENSG00000173614(gene)|ensembl:ENST00000377205(transcript)|ensembl:ENST00000462686(transcript)|go:"GO:0000309"(nicotinamide-nucleotide adenylyltransferase activity)|go:"GO:0004515"(nicotinate-nucleotide adenylyltransferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0009165"(nucleotide biosynthetic process)|go:"GO:0009435"(NAD biosynthetic process)|go:"GO:0009611"(response to wounding)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:1902511"(negative regulation of apoptotic DNA fragmentation)|go:"GO:1990966"(ATP generation from poly-ADP-D-ribose)|interpro:IPR004821(Cytidyltransferase-related)|interpro:IPR005248(Probable nicotinate-nucleotide adenylyltransferase)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|mint:Q9HAN9|rcsb pdb:1GZU|rcsb pdb:1KKU|rcsb pdb:1KQN|rcsb pdb:1KQO|rcsb pdb:1KR2|reactome:R-HSA-196807|refseq:XP_016857596.1|dip:DIP-60881N|entrezgene/locuslink:64802(identity) entrezgene/locuslink:54971(identity) intact:EBI-16438880(see-also)|intact:EBI-16438890(see-also)|intact:EBI-16438900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:KwV9lz04z3ptlVpKu3b534Yekpc9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:/Ll38steqYxamkTP1HwueCufmMs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HAN9 uniprotkb:E9PJI6 intact:EBI-3917542|uniprotkb:Q8TAE9|uniprotkb:Q9H6B6|uniprotkb:Q9H247|uniprotkb:B1AN63|ensembl:ENSP00000366410|ensembl:ENSP00000435134 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:nmna1_human(display_long)|uniprotkb:NMNAT1(gene name)|psi-mi:NMNAT1(display_short)|uniprotkb:NMNAT(gene name synonym)|uniprotkb:Nicotinate-nucleotide adenylyltransferase 1(gene name synonym)|uniprotkb:Nicotinamide-nucleotide adenylyltransferase 1(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465398 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284707.1|refseq:NP_073624.2|ensembl:ENSG00000173614(gene)|ensembl:ENST00000377205(transcript)|ensembl:ENST00000462686(transcript)|go:"GO:0000309"(nicotinamide-nucleotide adenylyltransferase activity)|go:"GO:0004515"(nicotinate-nucleotide adenylyltransferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0009165"(nucleotide biosynthetic process)|go:"GO:0009435"(NAD biosynthetic process)|go:"GO:0009611"(response to wounding)|go:"GO:0016604"(nuclear body)|go:"GO:0042802"(identical protein binding)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:1902511"(negative regulation of apoptotic DNA fragmentation)|go:"GO:1990966"(ATP generation from poly-ADP-D-ribose)|interpro:IPR004821(Cytidyltransferase-related)|interpro:IPR005248(Probable nicotinate-nucleotide adenylyltransferase)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|mint:Q9HAN9|rcsb pdb:1GZU|rcsb pdb:1KKU|rcsb pdb:1KQN|rcsb pdb:1KQO|rcsb pdb:1KR2|reactome:R-HSA-196807|refseq:XP_016857596.1|dip:DIP-60881N|entrezgene/locuslink:64802(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16438880(see-also)|intact:EBI-16438890(see-also)|intact:EBI-16438900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:KwV9lz04z3ptlVpKu3b534Yekpc9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:2/Mk2hotNFGkedZ8W815tUibD9I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O60479 intact:EBI-16431359 intact:EBI-3908248|uniprotkb:B3KQL6|ensembl:ENSP00000389870 - psi-mi:dlx3_human(display_long)|uniprotkb:DLX3(gene name)|psi-mi:DLX3(display_short) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465380 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005211.1|ensembl:ENSG00000064195(gene)|ensembl:ENST00000434704(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|interpro:IPR000047(Helix-turn-helix motif, lambda-like repressor)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR022135|rcsb pdb:4XRS|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001568"(blood vessel development)|go:"GO:0001890"(placenta development)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0030154"(cell differentiation)|go:"GO:0030855"(epithelial cell differentiation)|go:"GO:0042475"(odontogenesis of dentin-containing tooth)|go:"GO:0071895"(odontoblast differentiation)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|entrezgene/locuslink:1747(identity) entrezgene/locuslink:54971(identity) intact:EBI-16438402(see-also)|intact:EBI-16438412(see-also)|intact:EBI-16438422(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kU9aTRVuPjo/1OrEyWfyX4PMK9w9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:l+hOzs2ZxPgJo09uitNV34vNDRo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O60479 uniprotkb:E9PJI6 intact:EBI-3908248|uniprotkb:B3KQL6|ensembl:ENSP00000389870 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:dlx3_human(display_long)|uniprotkb:DLX3(gene name)|psi-mi:DLX3(display_short) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465362 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005211.1|ensembl:ENSG00000064195(gene)|ensembl:ENST00000434704(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|interpro:IPR000047(Helix-turn-helix motif, lambda-like repressor)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR022135|rcsb pdb:4XRS|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001568"(blood vessel development)|go:"GO:0001890"(placenta development)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0030154"(cell differentiation)|go:"GO:0030855"(epithelial cell differentiation)|go:"GO:0042475"(odontogenesis of dentin-containing tooth)|go:"GO:0071895"(odontoblast differentiation)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|entrezgene/locuslink:1747(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16438402(see-also)|intact:EBI-16438412(see-also)|intact:EBI-16438422(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kU9aTRVuPjo/1OrEyWfyX4PMK9w9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:vW37ddjzdRaaUlfle279LowFihQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050 uniprotkb:A0A0S2Z5G4 intact:EBI-866480|uniprotkb:O43258|uniprotkb:O43259|uniprotkb:O43260|uniprotkb:Q4ZGG7|uniprotkb:Q9BRL2|ensembl:ENSP00000352901 intact:EBI-16429704 psi-mi:foxm1_human(display_long)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym) psi-mi:a0a0s2z5g4_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465345 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_068772.2|refseq:NP_973731.1|refseq:NP_973732.1|refseq:NP_001230017.1|refseq:NP_001230018.1|dip:DIP-36754N|ensembl:ENSG00000111206(gene)|ensembl:ENST00000359843(transcript)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032873"(negative regulation of stress-activated MAPK cascade)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090344"(negative regulation of cell aging)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000781"(positive regulation of double-strand break repair)|interpro:IPR001766(Fork head transcription factor)|interpro:IPR018122|interpro:IPR030456|interpro:IPR036388|interpro:IPR036390|interpro:IPR042839|rcsb pdb:3G73|reactome:R-HSA-156711|reactome:R-HSA-69273|entrezgene/locuslink:2305(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:XP_016878869.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16437890(see-also)|intact:EBI-16437900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_7 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1jKIeT/XYuwT7KzYJbwdQXq7hM9606 rogid:B3CbJKL7yJtM34eeaCkXyqqisnQ9606 rigid:d0wWL85AFpJXEeXCyz4drdP3pVk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050 uniprotkb:B4DE54 intact:EBI-866480|uniprotkb:O43258|uniprotkb:O43259|uniprotkb:O43260|uniprotkb:Q4ZGG7|uniprotkb:Q9BRL2|ensembl:ENSP00000352901 intact:EBI-16429313 psi-mi:foxm1_human(display_long)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym) psi-mi:b4de54_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465328 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_068772.2|refseq:NP_973731.1|refseq:NP_973732.1|refseq:NP_001230017.1|refseq:NP_001230018.1|dip:DIP-36754N|ensembl:ENSG00000111206(gene)|ensembl:ENST00000359843(transcript)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032873"(negative regulation of stress-activated MAPK cascade)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090344"(negative regulation of cell aging)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000781"(positive regulation of double-strand break repair)|interpro:IPR001766(Fork head transcription factor)|interpro:IPR018122|interpro:IPR030456|interpro:IPR036388|interpro:IPR036390|interpro:IPR042839|rcsb pdb:3G73|reactome:R-HSA-156711|reactome:R-HSA-69273|entrezgene/locuslink:2305(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:NP_001167010.1|refseq:NP_001167013.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16437890(see-also)|intact:EBI-16437900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_5 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1jKIeT/XYuwT7KzYJbwdQXq7hM9606 rogid:B0JdOqrjin6J5XTIC/0dXs6kRyw9606 rigid:6k3W8FLqpAWGYWUM4YQyc8Rt96o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050 intact:EBI-16431359 intact:EBI-866480|uniprotkb:O43258|uniprotkb:O43259|uniprotkb:O43260|uniprotkb:Q4ZGG7|uniprotkb:Q9BRL2|ensembl:ENSP00000352901 - psi-mi:foxm1_human(display_long)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465311 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_068772.2|refseq:NP_973731.1|refseq:NP_973732.1|refseq:NP_001230017.1|refseq:NP_001230018.1|dip:DIP-36754N|ensembl:ENSG00000111206(gene)|ensembl:ENST00000359843(transcript)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032873"(negative regulation of stress-activated MAPK cascade)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090344"(negative regulation of cell aging)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000781"(positive regulation of double-strand break repair)|interpro:IPR001766(Fork head transcription factor)|interpro:IPR018122|interpro:IPR030456|interpro:IPR036388|interpro:IPR036390|interpro:IPR042839|rcsb pdb:3G73|reactome:R-HSA-156711|reactome:R-HSA-69273|entrezgene/locuslink:2305(identity) entrezgene/locuslink:54971(identity) intact:EBI-16437890(see-also)|intact:EBI-16437900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1jKIeT/XYuwT7KzYJbwdQXq7hM9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:x+oS2iSCrlYC7unbRSx9XPqvai0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050 uniprotkb:E9PJI6 intact:EBI-866480|uniprotkb:O43258|uniprotkb:O43259|uniprotkb:O43260|uniprotkb:Q4ZGG7|uniprotkb:Q9BRL2|ensembl:ENSP00000352901 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:foxm1_human(display_long)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465294 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_068772.2|refseq:NP_973731.1|refseq:NP_973732.1|refseq:NP_001230017.1|refseq:NP_001230018.1|dip:DIP-36754N|ensembl:ENSG00000111206(gene)|ensembl:ENST00000359843(transcript)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0019901"(protein kinase binding)|go:"GO:0032873"(negative regulation of stress-activated MAPK cascade)|go:"GO:0042127"(regulation of cell population proliferation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046578"(regulation of Ras protein signal transduction)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0090344"(negative regulation of cell aging)|go:"GO:2000377"(regulation of reactive oxygen species metabolic process)|go:"GO:2000781"(positive regulation of double-strand break repair)|interpro:IPR001766(Fork head transcription factor)|interpro:IPR018122|interpro:IPR030456|interpro:IPR036388|interpro:IPR036390|interpro:IPR042839|rcsb pdb:3G73|reactome:R-HSA-156711|reactome:R-HSA-69273|entrezgene/locuslink:2305(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16437890(see-also)|intact:EBI-16437900(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1jKIeT/XYuwT7KzYJbwdQXq7hM9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:fxjclG4s540yKAPBau19zsQUuQs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O94842 intact:EBI-16431359 intact:EBI-948613|ensembl:ENSP00000393080|ensembl:ENSP00000477868|intact:EBI-10965337|uniprotkb:B4DPY8|uniprotkb:E7EV69|uniprotkb:B4DSM0 - psi-mi:tox4_human(display_long)|uniprotkb:Epidermal Langerhans cell protein LCP1(gene name synonym)|uniprotkb:TOX4(gene name)|psi-mi:TOX4(display_short)|uniprotkb:KIAA0737(gene name synonym)|uniprotkb:C14orf92(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000092203(gene)|ensembl:ENST00000448790(transcript)|ensembl:ENST00000613569(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0072357"(PTW/PP1 phosphatase complex)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR036910|interpro:IPR037985|mint:O94842|refseq:NP_055643.1|refseq:NP_001290452.1|entrezgene/locuslink:9878(identity) entrezgene/locuslink:54971(identity) intact:EBI-16437830(see-also)|intact:EBI-16437840(see-also)|intact:EBI-16437850(see-also)|intact:EBI-16437860(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tiW0mcDNOr9TsvNLVZ+f36eiNpY9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:bC3VjCDwZN0DROCXFITAFmHsHT4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O94842 uniprotkb:E9PJI6 intact:EBI-948613|ensembl:ENSP00000393080|ensembl:ENSP00000477868|intact:EBI-10965337|uniprotkb:B4DPY8|uniprotkb:E7EV69|uniprotkb:B4DSM0 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:tox4_human(display_long)|uniprotkb:Epidermal Langerhans cell protein LCP1(gene name synonym)|uniprotkb:TOX4(gene name)|psi-mi:TOX4(display_short)|uniprotkb:KIAA0737(gene name synonym)|uniprotkb:C14orf92(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465256 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000092203(gene)|ensembl:ENST00000448790(transcript)|ensembl:ENST00000613569(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0072357"(PTW/PP1 phosphatase complex)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR036910|interpro:IPR037985|mint:O94842|refseq:NP_055643.1|refseq:NP_001290452.1|entrezgene/locuslink:9878(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16437830(see-also)|intact:EBI-16437840(see-also)|intact:EBI-16437850(see-also)|intact:EBI-16437860(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tiW0mcDNOr9TsvNLVZ+f36eiNpY9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:EiDWkcZNRU9NrZCdRoXvrag0oQo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14192 intact:EBI-16431359 intact:EBI-701903|ensembl:ENSP00000322909|ensembl:ENSP00000344266|ensembl:ENSP00000377020|ensembl:ENSP00000377021|ensembl:ENSP00000386633|ensembl:ENSP00000386665|ensembl:ENSP00000386892|ensembl:ENSP00000433567|uniprotkb:Q13229|uniprotkb:Q13644|uniprotkb:Q9P294|uniprotkb:Q2I5I4|uniprotkb:Q5TM15 - psi-mi:fhl2_human(display_long)|uniprotkb:Skeletal muscle LIM-protein 3(gene name synonym)|uniprotkb:LIM domain protein DRAL(gene name synonym)|uniprotkb:FHL2(gene name)|psi-mi:FHL2(display_short)|uniprotkb:DRAL(gene name synonym)|uniprotkb:SLIM3(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465237 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000115641(gene)|ensembl:ENST00000322142(transcript)|ensembl:ENST00000344213(transcript)|ensembl:ENST00000393352(transcript)|ensembl:ENST00000393353(transcript)|ensembl:ENST00000408995(transcript)|ensembl:ENST00000409177(transcript)|ensembl:ENST00000409807(transcript)|ensembl:ENST00000530340(transcript)|refseq:NP_001034581.1|refseq:NP_001441.4|refseq:NP_963849.1|refseq:NP_963851.2|refseq:NP_001305823.1|refseq:NP_001305824.1|refseq:NP_001305825.1|refseq:NP_001305826.1|refseq:XP_011509100.1|dip:DIP-5980N|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0008134"(transcription factor binding)|go:"GO:0009725"(response to hormone)|go:"GO:0030018"(Z disc)|go:"GO:0031430"(M band)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043425"(bHLH transcription factor binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0055014"(atrial cardiac muscle cell development)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060347"(heart trabecula formation)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|mint:Q14192|rcsb pdb:1X4K|rcsb pdb:1X4L|rcsb pdb:2D8Z|rcsb pdb:2MIU|reactome:R-HSA-1989781|entrezgene/locuslink:2274(identity) entrezgene/locuslink:54971(identity) intact:EBI-16437435(see-also)|intact:EBI-16437445(see-also)|intact:EBI-16437455(see-also)|intact:EBI-16437465(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4X5kI037ASzuT1zACXH89BkwDBk9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:ArVONf/tPqxkF5FnpVL0oIF91CQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14192 uniprotkb:E9PJI6 intact:EBI-701903|ensembl:ENSP00000322909|ensembl:ENSP00000344266|ensembl:ENSP00000377020|ensembl:ENSP00000377021|ensembl:ENSP00000386633|ensembl:ENSP00000386665|ensembl:ENSP00000386892|ensembl:ENSP00000433567|uniprotkb:Q13229|uniprotkb:Q13644|uniprotkb:Q9P294|uniprotkb:Q2I5I4|uniprotkb:Q5TM15 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:fhl2_human(display_long)|uniprotkb:Skeletal muscle LIM-protein 3(gene name synonym)|uniprotkb:LIM domain protein DRAL(gene name synonym)|uniprotkb:FHL2(gene name)|psi-mi:FHL2(display_short)|uniprotkb:DRAL(gene name synonym)|uniprotkb:SLIM3(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465218 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000115641(gene)|ensembl:ENST00000322142(transcript)|ensembl:ENST00000344213(transcript)|ensembl:ENST00000393352(transcript)|ensembl:ENST00000393353(transcript)|ensembl:ENST00000408995(transcript)|ensembl:ENST00000409177(transcript)|ensembl:ENST00000409807(transcript)|ensembl:ENST00000530340(transcript)|refseq:NP_001034581.1|refseq:NP_001441.4|refseq:NP_963849.1|refseq:NP_963851.2|refseq:NP_001305823.1|refseq:NP_001305824.1|refseq:NP_001305825.1|refseq:NP_001305826.1|refseq:XP_011509100.1|dip:DIP-5980N|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0008134"(transcription factor binding)|go:"GO:0009725"(response to hormone)|go:"GO:0030018"(Z disc)|go:"GO:0031430"(M band)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043425"(bHLH transcription factor binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0055014"(atrial cardiac muscle cell development)|go:"GO:0055015"(ventricular cardiac muscle cell development)|go:"GO:0060347"(heart trabecula formation)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|mint:Q14192|rcsb pdb:1X4K|rcsb pdb:1X4L|rcsb pdb:2D8Z|rcsb pdb:2MIU|reactome:R-HSA-1989781|entrezgene/locuslink:2274(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16437435(see-also)|intact:EBI-16437445(see-also)|intact:EBI-16437455(see-also)|intact:EBI-16437465(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4X5kI037ASzuT1zACXH89BkwDBk9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:z+XvVjtUKkSeByz5ElLk9kPZ0+s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P86478 uniprotkb:B4DE54 intact:EBI-12700196|ensembl:ENSP00000404281|uniprotkb:Q8N7V5 intact:EBI-16429313 psi-mi:pr20e_human(display_long)|uniprotkb:PRR20E(gene name)|psi-mi:PRR20E(display_short) psi-mi:b4de54_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465201 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000234278(gene)|ensembl:ENST00000434815(transcript)|interpro:IPR031439|refseq:NP_001123876.1|refseq:NP_001123877.1|refseq:NP_001123878.1|refseq:NP_001123879.1|refseq:NP_940843.1|refseq:XP_016855016.1|entrezgene/locuslink:122183(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:NP_001167010.1|refseq:NP_001167013.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16436727(see-also)|intact:EBI-16436737(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_5 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2wZckiY1jYSxwgm2NPfkiJDu4Bw9606 rogid:B0JdOqrjin6J5XTIC/0dXs6kRyw9606 rigid:Fl8GdB3MsrIP3VDT6c8M093Yi1w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P86478 intact:EBI-16431359 intact:EBI-12700196|ensembl:ENSP00000404281|uniprotkb:Q8N7V5 - psi-mi:pr20e_human(display_long)|uniprotkb:PRR20E(gene name)|psi-mi:PRR20E(display_short) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465184 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000234278(gene)|ensembl:ENST00000434815(transcript)|interpro:IPR031439|refseq:NP_001123876.1|refseq:NP_001123877.1|refseq:NP_001123878.1|refseq:NP_001123879.1|refseq:NP_940843.1|refseq:XP_016855016.1|entrezgene/locuslink:122183(identity) entrezgene/locuslink:54971(identity) intact:EBI-16436727(see-also)|intact:EBI-16436737(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2wZckiY1jYSxwgm2NPfkiJDu4Bw9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:ynnEBv5/cqBJh9ZTjBhXgiqcdgU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P86478 uniprotkb:E9PJI6 intact:EBI-12700196|ensembl:ENSP00000404281|uniprotkb:Q8N7V5 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:pr20e_human(display_long)|uniprotkb:PRR20E(gene name)|psi-mi:PRR20E(display_short) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465167 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000234278(gene)|ensembl:ENST00000434815(transcript)|interpro:IPR031439|refseq:NP_001123876.1|refseq:NP_001123877.1|refseq:NP_001123878.1|refseq:NP_001123879.1|refseq:NP_940843.1|refseq:XP_016855016.1|entrezgene/locuslink:122183(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16436727(see-also)|intact:EBI-16436737(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2wZckiY1jYSxwgm2NPfkiJDu4Bw9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:EOu8xuF/rc7WEpcjTwn869dUJUo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14627 uniprotkb:B4DE54 intact:EBI-10181162|uniprotkb:Q5JS20|uniprotkb:A1A513|ensembl:ENSP00000362613 intact:EBI-16429313 psi-mi:cdx4_human(display_long)|uniprotkb:CDX4(gene name)|psi-mi:CDX4(display_short)|uniprotkb:Caudal-type homeobox protein 4(gene name synonym) psi-mi:b4de54_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465151 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005184.1|ensembl:ENSG00000131264(gene)|ensembl:ENST00000373514(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001568"(blood vessel development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0030154"(cell differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060711"(labyrinthine layer development)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000047(Helix-turn-helix motif, lambda-like repressor)|interpro:IPR001356(Homeobox)|interpro:IPR006820(Caudal-like activation region)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|entrezgene/locuslink:1046(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:NP_001167010.1|refseq:NP_001167013.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16436717(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_5 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VjY+YbGRK+B4KOkI47ekRlWKivE9606 rogid:B0JdOqrjin6J5XTIC/0dXs6kRyw9606 rigid:wBqtU0sX2M51v2L91qJeOjKyA+4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14627 intact:EBI-16431359 intact:EBI-10181162|uniprotkb:Q5JS20|uniprotkb:A1A513|ensembl:ENSP00000362613 - psi-mi:cdx4_human(display_long)|uniprotkb:CDX4(gene name)|psi-mi:CDX4(display_short)|uniprotkb:Caudal-type homeobox protein 4(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465135 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005184.1|ensembl:ENSG00000131264(gene)|ensembl:ENST00000373514(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001568"(blood vessel development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0030154"(cell differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060711"(labyrinthine layer development)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000047(Helix-turn-helix motif, lambda-like repressor)|interpro:IPR001356(Homeobox)|interpro:IPR006820(Caudal-like activation region)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|entrezgene/locuslink:1046(identity) entrezgene/locuslink:54971(identity) intact:EBI-16436717(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VjY+YbGRK+B4KOkI47ekRlWKivE9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:sypmBy2E5FBONvXS3MKybukBaGI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14627 uniprotkb:E9PJI6 intact:EBI-10181162|uniprotkb:Q5JS20|uniprotkb:A1A513|ensembl:ENSP00000362613 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:cdx4_human(display_long)|uniprotkb:CDX4(gene name)|psi-mi:CDX4(display_short)|uniprotkb:Caudal-type homeobox protein 4(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465119 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005184.1|ensembl:ENSG00000131264(gene)|ensembl:ENST00000373514(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001568"(blood vessel development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009948"(anterior/posterior axis specification)|go:"GO:0030154"(cell differentiation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060711"(labyrinthine layer development)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000047(Helix-turn-helix motif, lambda-like repressor)|interpro:IPR001356(Homeobox)|interpro:IPR006820(Caudal-like activation region)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|entrezgene/locuslink:1046(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16436717(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VjY+YbGRK+B4KOkI47ekRlWKivE9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:zuMpXlWCHKcb4unxVXA++V9+CTU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:E9PJI6 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465099 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16435668(see-also)|intact:EBI-16435678(see-also)|intact:EBI-16435688(see-also)|intact:EBI-16435698(see-also)|intact:EBI-16435708(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:ifGScY2hev4/H5TLPtC+jPHfVWs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q02446 intact:EBI-16431359 intact:EBI-10198587|uniprotkb:Q32M52|uniprotkb:O60402|ensembl:ENSP00000222584 - psi-mi:sp4_human(display_long)|uniprotkb:SP4(gene name)|psi-mi:SP4(display_short)|uniprotkb:SPR-1(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465080 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003103.2|refseq:NP_001313472.1|ensembl:ENSP00000222584|ensembl:ENSG00000105866(gene)|ensembl:ENST00000222584(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR030453|interpro:IPR036236|entrezgene/locuslink:6671(identity) entrezgene/locuslink:54971(identity) intact:EBI-16435380(see-also)|intact:EBI-16435390(see-also)|intact:EBI-16435400(see-also)|intact:EBI-16435410(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:DK4Of4EpByHdtSsZb3eAiOlGFNY9606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:xHXnes3iVcxaHxP4otHDvAA+LIA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q02446 uniprotkb:E9PJI6 intact:EBI-10198587|uniprotkb:Q32M52|uniprotkb:O60402|ensembl:ENSP00000222584 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:sp4_human(display_long)|uniprotkb:SP4(gene name)|psi-mi:SP4(display_short)|uniprotkb:SPR-1(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465061 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003103.2|refseq:NP_001313472.1|ensembl:ENSP00000222584|ensembl:ENSG00000105866(gene)|ensembl:ENST00000222584(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR030453|interpro:IPR036236|entrezgene/locuslink:6671(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16435380(see-also)|intact:EBI-16435390(see-also)|intact:EBI-16435400(see-also)|intact:EBI-16435410(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:DK4Of4EpByHdtSsZb3eAiOlGFNY9606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:Pd+yVoJd2HfoKZYFYSQ3L2gwAbg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050-2 uniprotkb:A0A0S2Z5G4 intact:EBI-5237510|ensembl:ENSP00000354492 intact:EBI-16429704 psi-mi:q08050-2(display_long)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:FOXM1-b(isoform synonym)|uniprotkb:FoxM1B(isoform synonym) psi-mi:a0a0s2z5g4_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465043 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-866480(isoform-parent)|ensembl:ENSG00000111206(gene)|ensembl:ENST00000361953(transcript)|entrezgene/locuslink:2305(identity) interpro:IPR042343|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|refseq:XP_016878869.1|interpro:IPR018379|entrezgene/locuslink:54971(identity) intact:EBI-16434868(see-also)|intact:EBI-16434905(see-also)|intact:EBI-16434915(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_7 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OErBT+uyHfgzDn6xI1OC8CATC049606 rogid:B3CbJKL7yJtM34eeaCkXyqqisnQ9606 rigid:nqkpWWaVhlIHhQqKQU6GvZxS/BM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08050-2 intact:EBI-16431359 intact:EBI-5237510|ensembl:ENSP00000354492 - psi-mi:q08050-2(display_long)|uniprotkb:FOXM1(gene name)|psi-mi:FOXM1(display_short)|uniprotkb:FKHL16(gene name synonym)|uniprotkb:HFH11(gene name synonym)|uniprotkb:MPP2(gene name synonym)|uniprotkb:WIN(gene name synonym)|uniprotkb:Forkhead-related protein FKHL16(gene name synonym)|uniprotkb:Hepatocyte nuclear factor 3 forkhead homolog 11(gene name synonym)|uniprotkb:M-phase phosphoprotein 2(gene name synonym)|uniprotkb:MPM-2 reactive phosphoprotein 2(gene name synonym)|uniprotkb:Transcription factor Trident(gene name synonym)|uniprotkb:Winged-helix factor from INS-1 cells(gene name synonym)|uniprotkb:FOXM1-b(isoform synonym)|uniprotkb:FoxM1B(isoform synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465025 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-866480(isoform-parent)|ensembl:ENSG00000111206(gene)|ensembl:ENST00000361953(transcript)|entrezgene/locuslink:2305(identity) entrezgene/locuslink:54971(identity) intact:EBI-16434868(see-also)|intact:EBI-16434905(see-also)|intact:EBI-16434915(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OErBT+uyHfgzDn6xI1OC8CATC049606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:A//m5nsV5BKmHEWq5Cbky7XfVUQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12933 uniprotkb:E9PJI6 intact:EBI-355744|uniprotkb:Q96NT2|uniprotkb:A8K107|uniprotkb:B4DPJ7|uniprotkb:Q7Z337|intact:EBI-1046651|ensembl:ENSP00000247668 intact:EBI-16437731|ensembl:ENSP00000431812 psi-mi:traf2_human(display_long)|uniprotkb:TRAF2(gene name)|psi-mi:TRAF2(display_short)|uniprotkb:TRAP3(gene name synonym)|uniprotkb:Tumor necrosis factor type 2 receptor-associated protein 3(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRAF2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRAF2(gene name synonym) psi-mi:e9pji6_human(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465560 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_066961.2|refseq:XP_011517279.1|refseq:XP_011517280.1|refseq:XP_011517276.1|refseq:XP_011517277.1|refseq:XP_011517278.1|ensembl:ENSG00000127191(gene)|ensembl:ENST00000247668(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0002637"(regulation of immunoglobulin production)|go:"GO:0002726"(positive regulation of T cell cytokine production)|go:"GO:0002947"(tumor necrosis factor receptor superfamily complex)|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043507"(positive regulation of JUN kinase activity)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045121"(membrane raft)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046625"(sphingolipid binding)|go:"GO:0048255"(mRNA stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0097057"(TRAF2-GSTP1 complex)|go:"GO:0097300"(programmed necrotic cell death)|go:"GO:0097400"(interleukin-17-mediated signaling pathway)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1903265"(positive regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990604"(IRE1-TRAF2-ASK1 complex)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005174"(CD40 receptor binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0007165"(signal transduction)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0023019"(signal transduction involved in regulation of gene expression)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031435"(mitogen-activated protein kinase kinase kinase binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0032743"(positive regulation of interleukin-2 production)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034351"(negative regulation of glial cell apoptotic process)|go:"GO:0034622"|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035631"(CD40 receptor complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043120"(tumor necrosis factor binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027133|interpro:IPR032070|interpro:IPR037305|interpro:IPR043211|mint:Q12933|rcsb pdb:1CA4|rcsb pdb:1CA9|rcsb pdb:1CZY|rcsb pdb:1CZZ|rcsb pdb:1D00|rcsb pdb:1D01|rcsb pdb:1D0A|rcsb pdb:1D0J|rcsb pdb:1F3V|rcsb pdb:1QSC|rcsb pdb:3KNV|rcsb pdb:3M06|rcsb pdb:3M0A|rcsb pdb:3M0D|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-5357786|reactome:R-HSA-5357905|reactome:R-HSA-5357956|reactome:R-HSA-5668541|reactome:R-HSA-5675482|reactome:R-HSA-5676594|reactome:R-HSA-5689880|reactome:R-HSA-69416|reactome:R-HSA-75893|reactome:R-HSA-933541|reactome:R-HSA-933542|reactome:R-HSA-9693928|refseq:XP_016870584.1|dip:DIP-6223N|entrezgene/locuslink:7186(identity) ensembl:ENSG00000172530(gene)|ensembl:ENST00000466197(transcript)|interpro:IPR042343|entrezgene/locuslink:54971(identity) intact:EBI-16440634(see-also)|intact:EBI-16440644(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_2 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JhaoM5kRLh3zwhXr+BsCCRNOYa09606 rogid:7cRt4IDU8Mehi7xlruMSFkll1zw9606 rigid:BBFTgcm3BI4aGb8Mk+DeygVLNXA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96LC9 uniprotkb:Q07817-2 intact:EBI-3919268|ensembl:ENSP00000346697|ensembl:ENSP00000380703|ensembl:ENSP00000453522|ensembl:ENSP00000453892|uniprotkb:Q7Z7D5|uniprotkb:Q9H7K7|uniprotkb:Q6NT30|uniprotkb:Q6P9F6|uniprotkb:Q6NT56|uniprotkb:Q7Z7D4|uniprotkb:Q2M396 intact:EBI-11091297|ensembl:ENSP00000365223|ensembl:ENSP00000411252 psi-mi:bmf_human(display_long)|uniprotkb:BMF(gene name)|psi-mi:BMF(display_short) psi-mi:q07817-2(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:Apoptosis regulator Bcl-X(gene name synonym)|uniprotkb:BCL2L(gene name synonym)|uniprotkb:BCLX(gene name synonym)|uniprotkb:Bcl-xS(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465594 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000104081(gene)|ensembl:ENST00000354670(transcript)|ensembl:ENST00000397573(transcript)|ensembl:ENST00000561282(transcript)|ensembl:ENST00000561360(transcript)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016459"(myosin complex)|go:"GO:0031334"(positive regulation of protein-containing complex assembly)|go:"GO:0034644"(cellular response to UV)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043276"(anoikis)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|interpro:IPR028192|reactome:R-HSA-111453|reactome:R-HSA-139910|refseq:NP_001003940.1|refseq:NP_001003942.1|refseq:NP_001003943.1|refseq:NP_277038.1|entrezgene/locuslink:90427(identity) ensembl:ENSG00000171552(gene)|ensembl:ENST00000376055(transcript)|ensembl:ENST00000422920(transcript)|intact:EBI-78035(isoform-parent)|uniprotkb:Q07817-2(isoform-parent)|entrezgene/locuslink:598(identity) intact:EBI-16431439(see-also)|intact:EBI-16431451(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_2 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2i6Tua07jZ3glxnc0ruMueU/JZw9606 rogid:NuCOMqr3shrrS2ILt09VPU3WROU9606 rigid:A1EKQaHkB59ikhPsYdlO4bbrFZk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12933 intact:EBI-16431359 intact:EBI-355744|uniprotkb:Q96NT2|uniprotkb:A8K107|uniprotkb:B4DPJ7|uniprotkb:Q7Z337|intact:EBI-1046651|ensembl:ENSP00000247668 - psi-mi:traf2_human(display_long)|uniprotkb:TRAF2(gene name)|psi-mi:TRAF2(display_short)|uniprotkb:TRAP3(gene name synonym)|uniprotkb:Tumor necrosis factor type 2 receptor-associated protein 3(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRAF2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRAF2(gene name synonym) psi-mi:"ccsb isoform id: banp_3"(display_short)|psi-mi:EBI-16431359(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465577 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_066961.2|refseq:XP_011517279.1|refseq:XP_011517280.1|refseq:XP_011517276.1|refseq:XP_011517277.1|refseq:XP_011517278.1|ensembl:ENSG00000127191(gene)|ensembl:ENST00000247668(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0002637"(regulation of immunoglobulin production)|go:"GO:0002726"(positive regulation of T cell cytokine production)|go:"GO:0002947"(tumor necrosis factor receptor superfamily complex)|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043507"(positive regulation of JUN kinase activity)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045121"(membrane raft)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046625"(sphingolipid binding)|go:"GO:0048255"(mRNA stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0097057"(TRAF2-GSTP1 complex)|go:"GO:0097300"(programmed necrotic cell death)|go:"GO:0097400"(interleukin-17-mediated signaling pathway)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1903265"(positive regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990604"(IRE1-TRAF2-ASK1 complex)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005174"(CD40 receptor binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0007165"(signal transduction)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0023019"(signal transduction involved in regulation of gene expression)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031435"(mitogen-activated protein kinase kinase kinase binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0032743"(positive regulation of interleukin-2 production)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034351"(negative regulation of glial cell apoptotic process)|go:"GO:0034622"|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035631"(CD40 receptor complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043120"(tumor necrosis factor binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027133|interpro:IPR032070|interpro:IPR037305|interpro:IPR043211|mint:Q12933|rcsb pdb:1CA4|rcsb pdb:1CA9|rcsb pdb:1CZY|rcsb pdb:1CZZ|rcsb pdb:1D00|rcsb pdb:1D01|rcsb pdb:1D0A|rcsb pdb:1D0J|rcsb pdb:1F3V|rcsb pdb:1QSC|rcsb pdb:3KNV|rcsb pdb:3M06|rcsb pdb:3M0A|rcsb pdb:3M0D|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-5357786|reactome:R-HSA-5357905|reactome:R-HSA-5357956|reactome:R-HSA-5668541|reactome:R-HSA-5675482|reactome:R-HSA-5676594|reactome:R-HSA-5689880|reactome:R-HSA-69416|reactome:R-HSA-75893|reactome:R-HSA-933541|reactome:R-HSA-933542|reactome:R-HSA-9693928|refseq:XP_016870584.1|dip:DIP-6223N|entrezgene/locuslink:7186(identity) entrezgene/locuslink:54971(identity) intact:EBI-16440634(see-also)|intact:EBI-16440644(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BANP_3 expression is provided in figureS2G."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JhaoM5kRLh3zwhXr+BsCCRNOYa09606 rogid:phgk1PxCdw0huTZTOM6vU3FYuC89606 rigid:zXWMX7GYzE+rYGqMrK8rI0iYhDw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q92934 uniprotkb:A0A0S2Z3D2 intact:EBI-700771|uniprotkb:O14803|uniprotkb:Q6FH21|ensembl:ENSP00000309103|ensembl:ENSP00000378040 intact:EBI-16431449 psi-mi:bad_human(display_long)|uniprotkb:Bcl-2-binding component 6(gene name synonym)|uniprotkb:Bcl-2-like protein 8(gene name synonym)|uniprotkb:BAD(gene name)|psi-mi:BAD(display_short)|uniprotkb:BBC6(gene name synonym)|uniprotkb:BCL2L8(gene name synonym)|uniprotkb:Bcl-xL/Bcl-2-associated death promoter(gene name synonym)|uniprotkb:Bcl2 antagonist of cell death(gene name synonym) psi-mi:a0a0s2z3d2_human(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:Bcl-2-like protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465627 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004313.1|refseq:NP_116784.1|dip:DIP-29184N|ensembl:ENSG00000002330(gene)|ensembl:ENST00000309032(transcript)|ensembl:ENST00000394532(transcript)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006007"(glucose catabolic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008289"(lipid binding)|go:"GO:0008625"(extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0008656"(cysteine-type endopeptidase activator activity involved in apoptotic process)|go:"GO:0009749"(response to glucose)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0010918"(positive regulation of mitochondrial membrane potential)|go:"GO:0019050"(suppression by virus of host apoptotic process)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030346"(protein phosphatase 2B binding)|go:"GO:0032024"(positive regulation of insulin secretion)|go:"GO:0032355"(response to estradiol)|go:"GO:0032570"(response to progesterone)|go:"GO:0033133"(positive regulation of glucokinase activity)|go:"GO:0033574"(response to testosterone)|go:"GO:0034201"(response to oleic acid)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0042493"|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043200"(response to amino acid)|go:"GO:0043280"(positive regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043422"(protein kinase B binding)|go:"GO:0044342"(type B pancreatic cell proliferation)|go:"GO:0045471"(response to ethanol)|go:"GO:0045579"(positive regulation of B cell differentiation)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0045862"(positive regulation of proteolysis)|go:"GO:0046031"(ADP metabolic process)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046902"(regulation of mitochondrial membrane permeability)|go:"GO:0046931"(pore complex assembly)|go:"GO:0050679"(positive regulation of epithelial cell proliferation)|go:"GO:0051384"(response to glucocorticoid)|go:"GO:0051592"(response to calcium ion)|go:"GO:0060139"(positive regulation of apoptotic process by virus)|go:"GO:0071247"(cellular response to chromate)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071396"(cellular response to lipid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071889"(14-3-3 protein binding)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0097191"(extrinsic apoptotic signaling pathway)|go:"GO:0097192"(extrinsic apoptotic signaling pathway in absence of ligand)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901216"(positive regulation of neuron death)|go:"GO:1901423"(response to benzene)|go:"GO:1902220"(positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress)|go:"GO:1904710"(positive regulation of granulosa cell apoptotic process)|go:"GO:2000078"(positive regulation of type B pancreatic cell development)|interpro:IPR018868|mint:Q92934|rcsb pdb:1G5J|reactome:R-HSA-111447|reactome:R-HSA-111453|reactome:R-HSA-193648|reactome:R-HSA-198323|reactome:R-HSA-5674400|entrezgene/locuslink:572(identity) go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR026298|interpro:IPR020731|interpro:IPR002475(BCL2-like apoptosis inhibitor)|interpro:IPR003093(Apoptosis regulator Bcl-2 protein, BH4)|interpro:IPR013279(Apoptosis regulator, Bcl-X)|interpro:IPR020728|interpro:IPR036834|entrezgene/locuslink:598(identity) intact:EBI-16433819(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_3 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2c2kSu+3ZHnx458SDbvIcdGV4PA9606 rogid:3qwkOrNcTdGiBthNQHV3qpVD13s9606 rigid:WOzWuD/uK7QBBg8FJwVGoYz8Z1A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q92934 uniprotkb:Q07817-2 intact:EBI-700771|uniprotkb:O14803|uniprotkb:Q6FH21|ensembl:ENSP00000309103|ensembl:ENSP00000378040 intact:EBI-11091297|ensembl:ENSP00000365223|ensembl:ENSP00000411252 psi-mi:bad_human(display_long)|uniprotkb:Bcl-2-binding component 6(gene name synonym)|uniprotkb:Bcl-2-like protein 8(gene name synonym)|uniprotkb:BAD(gene name)|psi-mi:BAD(display_short)|uniprotkb:BBC6(gene name synonym)|uniprotkb:BCL2L8(gene name synonym)|uniprotkb:Bcl-xL/Bcl-2-associated death promoter(gene name synonym)|uniprotkb:Bcl2 antagonist of cell death(gene name synonym) psi-mi:q07817-2(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:Apoptosis regulator Bcl-X(gene name synonym)|uniprotkb:BCL2L(gene name synonym)|uniprotkb:BCLX(gene name synonym)|uniprotkb:Bcl-xS(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465611 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004313.1|refseq:NP_116784.1|dip:DIP-29184N|ensembl:ENSG00000002330(gene)|ensembl:ENST00000309032(transcript)|ensembl:ENST00000394532(transcript)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006007"(glucose catabolic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008289"(lipid binding)|go:"GO:0008625"(extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0008656"(cysteine-type endopeptidase activator activity involved in apoptotic process)|go:"GO:0009749"(response to glucose)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0010918"(positive regulation of mitochondrial membrane potential)|go:"GO:0019050"(suppression by virus of host apoptotic process)|go:"GO:0019221"(cytokine-mediated signaling pathway)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030346"(protein phosphatase 2B binding)|go:"GO:0032024"(positive regulation of insulin secretion)|go:"GO:0032355"(response to estradiol)|go:"GO:0032570"(response to progesterone)|go:"GO:0033133"(positive regulation of glucokinase activity)|go:"GO:0033574"(response to testosterone)|go:"GO:0034201"(response to oleic acid)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0042493"|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043200"(response to amino acid)|go:"GO:0043280"(positive regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043422"(protein kinase B binding)|go:"GO:0044342"(type B pancreatic cell proliferation)|go:"GO:0045471"(response to ethanol)|go:"GO:0045579"(positive regulation of B cell differentiation)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0045862"(positive regulation of proteolysis)|go:"GO:0046031"(ADP metabolic process)|go:"GO:0046034"(ATP metabolic process)|go:"GO:0046902"(regulation of mitochondrial membrane permeability)|go:"GO:0046931"(pore complex assembly)|go:"GO:0050679"(positive regulation of epithelial cell proliferation)|go:"GO:0051384"(response to glucocorticoid)|go:"GO:0051592"(response to calcium ion)|go:"GO:0060139"(positive regulation of apoptotic process by virus)|go:"GO:0071247"(cellular response to chromate)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0071316"(cellular response to nicotine)|go:"GO:0071396"(cellular response to lipid)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071889"(14-3-3 protein binding)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0097191"(extrinsic apoptotic signaling pathway)|go:"GO:0097192"(extrinsic apoptotic signaling pathway in absence of ligand)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|go:"GO:0097202"(activation of cysteine-type endopeptidase activity)|go:"GO:1901216"(positive regulation of neuron death)|go:"GO:1901423"(response to benzene)|go:"GO:1902220"(positive regulation of intrinsic apoptotic signaling pathway in response to osmotic stress)|go:"GO:1904710"(positive regulation of granulosa cell apoptotic process)|go:"GO:2000078"(positive regulation of type B pancreatic cell development)|interpro:IPR018868|mint:Q92934|rcsb pdb:1G5J|reactome:R-HSA-111447|reactome:R-HSA-111453|reactome:R-HSA-193648|reactome:R-HSA-198323|reactome:R-HSA-5674400|entrezgene/locuslink:572(identity) ensembl:ENSG00000171552(gene)|ensembl:ENST00000376055(transcript)|ensembl:ENST00000422920(transcript)|intact:EBI-78035(isoform-parent)|uniprotkb:Q07817-2(isoform-parent)|entrezgene/locuslink:598(identity) intact:EBI-16433819(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_2 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2c2kSu+3ZHnx458SDbvIcdGV4PA9606 rogid:NuCOMqr3shrrS2ILt09VPU3WROU9606 rigid:2NTFzffv7sWgyu+aMlbuPQeksys true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WWW0-2 uniprotkb:A0A0S2Z4Q5 intact:EBI-960502|ensembl:ENSP00000462576 intact:EBI-16465731 psi-mi:q8www0-2(display_long)|uniprotkb:B(isoform synonym)|uniprotkb:RASSF5(gene name)|psi-mi:RASSF5(display_short)|uniprotkb:NORE1(gene name synonym)|uniprotkb:RAPL(gene name synonym)|uniprotkb:New ras effector 1(gene name synonym)|uniprotkb:Regulator for cell adhesion and polarization enriched in lymphoid tissues(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465752 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-367390(q8www0_human)|ensembl:ENSG00000266094(gene)|ensembl:ENST00000577571(transcript)|uniprotkb:Q8WWW0-2(isoform-parent)|entrezgene/locuslink:83593(identity) entrezgene/locuslink:8945(identity) intact:EBI-16430021(see-also)|intact:EBI-16430031(see-also) isoform-comment:Initiator Met-1 is removed. Contains a N-acetylthreonine at position 2. - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zcc13rWLmCPQVfU4D6bvIiAnIbc9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:OYpdezIR2SdeuLfywqlB4Y8InAk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C026 uniprotkb:A0A0S2Z4Q5 intact:EBI-720828|ensembl:ENSP00000298355|uniprotkb:Q92557|uniprotkb:Q96D24|uniprotkb:Q96NI4|uniprotkb:Q9C025|uniprotkb:Q9C027|uniprotkb:D3DSB7|uniprotkb:D3DSB8 intact:EBI-16465731 psi-mi:trim9_human(display_long)|uniprotkb:RING finger protein 91(gene name synonym)|uniprotkb:TRIM9(gene name)|psi-mi:TRIM9(display_short)|uniprotkb:KIAA0282(gene name synonym)|uniprotkb:RNF91(gene name synonym)|uniprotkb:Tripartite motif-containing protein 9(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM9(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465786 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100505(gene)|ensembl:ENST00000298355(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005856"(cytoskeleton)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030425"(dendrite)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003649(B-box, C-terminal)|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR017903|interpro:IPR017907|interpro:IPR036116|interpro:IPR043136|rcsb pdb:2DB8|rcsb pdb:7B2S|reactome:R-HSA-983168|refseq:XP_011534691.1|refseq:NP_055978.4|refseq:NP_443210.1|refseq:XP_016876434.1|entrezgene/locuslink:114088(identity) entrezgene/locuslink:8945(identity) intact:EBI-16431493(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:cWf6NobHVvKBKNqclJsLeoJKfMw9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:umZzOXc+BSoh3FXyg6cx6pfeIZ8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00444 uniprotkb:A0A0S2Z4Q5 intact:EBI-746202|uniprotkb:Q8IYF0|uniprotkb:Q96Q95|uniprotkb:B2RAL0|uniprotkb:B7Z837|uniprotkb:B7Z8G7|uniprotkb:Q9UD84|uniprotkb:Q9UDE2|ensembl:ENSP00000270861 intact:EBI-16465731 psi-mi:plk4_human(display_long)|uniprotkb:Polo-like kinase 4(gene name synonym)|uniprotkb:Serine/threonine-protein kinase Sak(gene name synonym)|uniprotkb:Serine/threonine-protein kinase 18(gene name synonym)|uniprotkb:PLK4(gene name)|psi-mi:PLK4(display_short)|uniprotkb:SAK(gene name synonym)|uniprotkb:STK18(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465802 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177728.1|refseq:NP_001177730.1|refseq:NP_055079.3|dip:DIP-34467N|rcsb pdb:5LHZ|rcsb pdb:6N45|rcsb pdb:6N46|rcsb pdb:6W38|rcsb pdb:6W3I|rcsb pdb:6W3J|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|rcsb pdb:5LHY|reactome:R-HSA-5620912|reactome:R-HSA-8854518|ensembl:ENSG00000142731(gene)|ensembl:ENST00000270861(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000922"(spindle pole)|go:"GO:0001741"(XY body)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007099"(centriole replication)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0046601"(positive regulation of centriole replication)|go:"GO:0060271"(cilium assembly)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0098535"(de novo centriole assembly involved in multi-ciliated epithelial cell differentiation)|go:"GO:0098536"(deuterosome)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR000959(POLO box duplicated region)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR033696|interpro:IPR033698|interpro:IPR033699|interpro:IPR033700|mint:O00444|rcsb pdb:2N19|rcsb pdb:3COK|rcsb pdb:4JXF|rcsb pdb:4N7V|rcsb pdb:4N7Z|rcsb pdb:4N9J|rcsb pdb:4YUR|rcsb pdb:4YYP|entrezgene/locuslink:10733(identity) entrezgene/locuslink:8945(identity) intact:EBI-16432676(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:xqjVEnoGXDk/+2AzLRAkyPK80OI9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:OwfhuvELWC1WlvvffUkpRIc4WXA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00444 uniprotkb:A0A0S2Z507 intact:EBI-746202|uniprotkb:Q8IYF0|uniprotkb:Q96Q95|uniprotkb:B2RAL0|uniprotkb:B7Z837|uniprotkb:B7Z8G7|uniprotkb:Q9UD84|uniprotkb:Q9UDE2|ensembl:ENSP00000270861 intact:EBI-16429247 psi-mi:plk4_human(display_long)|uniprotkb:Polo-like kinase 4(gene name synonym)|uniprotkb:Serine/threonine-protein kinase Sak(gene name synonym)|uniprotkb:Serine/threonine-protein kinase 18(gene name synonym)|uniprotkb:PLK4(gene name)|psi-mi:PLK4(display_short)|uniprotkb:SAK(gene name synonym)|uniprotkb:STK18(gene name synonym) psi-mi:a0a0s2z507_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465818 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177728.1|refseq:NP_001177730.1|refseq:NP_055079.3|dip:DIP-34467N|rcsb pdb:5LHZ|rcsb pdb:6N45|rcsb pdb:6N46|rcsb pdb:6W38|rcsb pdb:6W3I|rcsb pdb:6W3J|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|rcsb pdb:5LHY|reactome:R-HSA-5620912|reactome:R-HSA-8854518|ensembl:ENSG00000142731(gene)|ensembl:ENST00000270861(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000922"(spindle pole)|go:"GO:0001741"(XY body)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007099"(centriole replication)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0046601"(positive regulation of centriole replication)|go:"GO:0060271"(cilium assembly)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0098535"(de novo centriole assembly involved in multi-ciliated epithelial cell differentiation)|go:"GO:0098536"(deuterosome)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR000959(POLO box duplicated region)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR033696|interpro:IPR033698|interpro:IPR033699|interpro:IPR033700|mint:O00444|rcsb pdb:2N19|rcsb pdb:3COK|rcsb pdb:4JXF|rcsb pdb:4N7V|rcsb pdb:4N7Z|rcsb pdb:4N9J|rcsb pdb:4YUR|rcsb pdb:4YYP|entrezgene/locuslink:10733(identity) go:"GO:0046983"(protein dimerization activity)|interpro:IPR021977|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036047|interpro:IPR036322|entrezgene/locuslink:8945(identity) intact:EBI-16432676(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BTRC_3 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:xqjVEnoGXDk/+2AzLRAkyPK80OI9606 rogid:MFv+nq3XA7DR61lk2x4jN8sKfCw9606 rigid:HT4+0clf0EvS6FwXkeFXn0WudT4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00444 uniprotkb:B7Z3H4 intact:EBI-746202|uniprotkb:Q8IYF0|uniprotkb:Q96Q95|uniprotkb:B2RAL0|uniprotkb:B7Z837|uniprotkb:B7Z8G7|uniprotkb:Q9UD84|uniprotkb:Q9UDE2|ensembl:ENSP00000270861 intact:EBI-16429269|ensembl:ENSP00000377088 psi-mi:plk4_human(display_long)|uniprotkb:Polo-like kinase 4(gene name synonym)|uniprotkb:Serine/threonine-protein kinase Sak(gene name synonym)|uniprotkb:Serine/threonine-protein kinase 18(gene name synonym)|uniprotkb:PLK4(gene name)|psi-mi:PLK4(display_short)|uniprotkb:SAK(gene name synonym)|uniprotkb:STK18(gene name synonym) psi-mi:b7z3h4_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short)|uniprotkb:hCG_1811016(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465834 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177728.1|refseq:NP_001177730.1|refseq:NP_055079.3|dip:DIP-34467N|rcsb pdb:5LHZ|rcsb pdb:6N45|rcsb pdb:6N46|rcsb pdb:6W38|rcsb pdb:6W3I|rcsb pdb:6W3J|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|rcsb pdb:5LHY|reactome:R-HSA-5620912|reactome:R-HSA-8854518|ensembl:ENSG00000142731(gene)|ensembl:ENST00000270861(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000922"(spindle pole)|go:"GO:0001741"(XY body)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007099"(centriole replication)|go:"GO:0032154"(cleavage furrow)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0046601"(positive regulation of centriole replication)|go:"GO:0060271"(cilium assembly)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0098535"(de novo centriole assembly involved in multi-ciliated epithelial cell differentiation)|go:"GO:0098536"(deuterosome)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR000959(POLO box duplicated region)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR033696|interpro:IPR033698|interpro:IPR033699|interpro:IPR033700|mint:O00444|rcsb pdb:2N19|rcsb pdb:3COK|rcsb pdb:4JXF|rcsb pdb:4N7V|rcsb pdb:4N7Z|rcsb pdb:4N9J|rcsb pdb:4YUR|rcsb pdb:4YYP|entrezgene/locuslink:10733(identity) ensembl:ENSG00000166167(gene)|ensembl:ENST00000393441(transcript)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR001680(WD40 repeat)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR021977|interpro:IPR036047|interpro:IPR036322|refseq:NP_001243785.1|entrezgene/locuslink:8945(identity) intact:EBI-16432676(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BTRC_4 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:xqjVEnoGXDk/+2AzLRAkyPK80OI9606 rogid:IbM+YU1ikaWXnOc33Set3iX0O+Q9606 rigid:augjcqPlx9PF/mNB8QjLoBzzObY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P18848 uniprotkb:A0A0S2Z4Q5 intact:EBI-492498|uniprotkb:Q9UH31|ensembl:ENSP00000336790|ensembl:ENSP00000379912|ensembl:ENSP00000501783|ensembl:ENSP00000501863|ensembl:ENSP00000502400|ensembl:ENSP00000502610|ensembl:ENSP00000505360|ensembl:ENSP00000384587|intact:EBI-740263|uniprotkb:Q96AQ3 intact:EBI-16465731 psi-mi:atf4_human(display_long)|uniprotkb:Activating transcription factor 4(gene name synonym)|uniprotkb:CREB2(gene name synonym)|uniprotkb:ATF4(gene name)|psi-mi:ATF4(display_short)|uniprotkb:TXREB(gene name synonym)|uniprotkb:Cyclic AMP-responsive element-binding protein 2(gene name synonym)|uniprotkb:Tax-responsive enhancer element-binding protein 67(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465850 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001666.2|refseq:NP_877962.1|ensembl:ENSG00000128272(gene)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005886"(plasma membrane)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0008140"(cAMP response element binding protein binding)|go:"GO:0010575"(positive regulation of vascular endothelial growth factor production)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030282"(bone mineralization)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031667"(response to nutrient levels)|go:"GO:0032057"(negative regulation of translational initiation in response to stress)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070309"(lens fiber cell morphogenesis)|go:"GO:0070982"(L-asparagine metabolic process)|go:"GO:0120163"(negative regulation of cold-induced thermogenesis)|go:"GO:0140467"(integrated stress response signaling)|go:"GO:0140468"(HRI-mediated signaling)|go:"GO:1903204"(negative regulation of oxidative stress-induced neuron death)|go:"GO:1903351"(cellular response to dopamine)|go:"GO:1990037"(Lewy body core)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990589"(ATF4-CREB1 transcription factor complex)|go:"GO:1990590"(ATF1-ATF4 transcription factor complex)|go:"GO:1990617"(CHOP-ATF4 complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR004827("Basic-leucine zipper (bZIP) transcription factor")|interpro:IPR029811|mint:P18848|rcsb pdb:1CI6|reactome:R-HSA-380994|reactome:R-HSA-381042|reactome:R-HSA-381183|reactome:R-HSA-9633012|reactome:R-HSA-9648895|go:"GO:0043005"(neuron projection)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045667"(regulation of osteoblast differentiation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034644"(cellular response to UV)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035162"(embryonic hemopoiesis)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0036091"(positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress)|go:"GO:0036499"(PERK-mediated unfolded protein response)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048167"(regulation of synaptic plasticity)|go:"GO:0061395"(positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|ensembl:ENST00000337304(transcript)|ensembl:ENST00000396680(transcript)|ensembl:ENST00000404241(transcript)|ensembl:ENST00000674568(transcript)|ensembl:ENST00000674835(transcript)|ensembl:ENST00000674920(transcript)|ensembl:ENST00000676346(transcript)|ensembl:ENST00000679776(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|refseq:XP_016884296.1|dip:DIP-354N|entrezgene/locuslink:468(identity) entrezgene/locuslink:8945(identity) intact:EBI-16434975(see-also)|intact:EBI-16434985(see-also) crc64:3BBB7379DC3B0D07|comment:"No Uniprot Update and Caution removed \" The protein could not be merged with EBI-12907955 because of some conflicts with the protein sequence (features which cannot be shifted).\" -EBI-12907955 no longer exists." - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2UolKWXxKFddysaOo70/U/1pI5k9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:WVl3z4HbM4ROl58XwRA3gRAw7m4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C026-5 uniprotkb:A0A0S2Z4Q5 intact:EBI-16437499|ensembl:ENSP00000353561 intact:EBI-16465731 psi-mi:q9c026-5(display_long)|uniprotkb:RING finger protein 91(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM9(gene name synonym)|uniprotkb:Tripartite motif-containing protein 9(gene name synonym)|uniprotkb:TRIM9(gene name)|psi-mi:TRIM9(display_short)|uniprotkb:KIAA0282(gene name synonym)|uniprotkb:RNF91(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465867 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100505(gene)|ensembl:ENST00000360392(transcript)|intact:EBI-720828(isoform-parent)|uniprotkb:Q9C026-5(isoform-parent)|entrezgene/locuslink:114088(identity) entrezgene/locuslink:8945(identity) intact:EBI-16437506(see-also)|intact:EBI-16437516(see-also)|intact:EBI-16437526(see-also) isoform-comment:May be due to intron retention. - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:6t1br4sRAyAn+kB91xNFnS/ZhVc9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:ie0AUaZRWYs/blB5M4VLgTC3rU0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P18848 uniprotkb:A0A0S2Z4Q5 intact:EBI-492498|uniprotkb:Q9UH31|ensembl:ENSP00000336790|ensembl:ENSP00000379912|ensembl:ENSP00000501783|ensembl:ENSP00000501863|ensembl:ENSP00000502400|ensembl:ENSP00000502610|ensembl:ENSP00000505360|ensembl:ENSP00000384587|intact:EBI-740263|uniprotkb:Q96AQ3 intact:EBI-16465731 psi-mi:atf4_human(display_long)|uniprotkb:Activating transcription factor 4(gene name synonym)|uniprotkb:CREB2(gene name synonym)|uniprotkb:ATF4(gene name)|psi-mi:ATF4(display_short)|uniprotkb:TXREB(gene name synonym)|uniprotkb:Cyclic AMP-responsive element-binding protein 2(gene name synonym)|uniprotkb:Tax-responsive enhancer element-binding protein 67(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465885 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001666.2|refseq:NP_877962.1|ensembl:ENSG00000128272(gene)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005886"(plasma membrane)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0008140"(cAMP response element binding protein binding)|go:"GO:0010575"(positive regulation of vascular endothelial growth factor production)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016607"(nuclear speck)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030282"(bone mineralization)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031667"(response to nutrient levels)|go:"GO:0032057"(negative regulation of translational initiation in response to stress)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070309"(lens fiber cell morphogenesis)|go:"GO:0070982"(L-asparagine metabolic process)|go:"GO:0120163"(negative regulation of cold-induced thermogenesis)|go:"GO:0140467"(integrated stress response signaling)|go:"GO:0140468"(HRI-mediated signaling)|go:"GO:1903204"(negative regulation of oxidative stress-induced neuron death)|go:"GO:1903351"(cellular response to dopamine)|go:"GO:1990037"(Lewy body core)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990589"(ATF4-CREB1 transcription factor complex)|go:"GO:1990590"(ATF1-ATF4 transcription factor complex)|go:"GO:1990617"(CHOP-ATF4 complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR004827("Basic-leucine zipper (bZIP) transcription factor")|interpro:IPR029811|mint:P18848|rcsb pdb:1CI6|reactome:R-HSA-380994|reactome:R-HSA-381042|reactome:R-HSA-381183|reactome:R-HSA-9633012|reactome:R-HSA-9648895|go:"GO:0043005"(neuron projection)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045667"(regulation of osteoblast differentiation)|go:"GO:0034198"(cellular response to amino acid starvation)|go:"GO:0034399"(nuclear periphery)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0034644"(cellular response to UV)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035162"(embryonic hemopoiesis)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0036091"(positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress)|go:"GO:0036499"(PERK-mediated unfolded protein response)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048167"(regulation of synaptic plasticity)|go:"GO:0061395"(positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|ensembl:ENST00000337304(transcript)|ensembl:ENST00000396680(transcript)|ensembl:ENST00000404241(transcript)|ensembl:ENST00000674568(transcript)|ensembl:ENST00000674835(transcript)|ensembl:ENST00000674920(transcript)|ensembl:ENST00000676346(transcript)|ensembl:ENST00000679776(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|refseq:XP_016884296.1|dip:DIP-354N|entrezgene/locuslink:468(identity) entrezgene/locuslink:8945(identity) intact:EBI-16437999(see-also)|intact:EBI-16438009(see-also)|intact:EBI-16438019(see-also) crc64:3BBB7379DC3B0D07|comment:"No Uniprot Update and Caution removed \" The protein could not be merged with EBI-12907955 because of some conflicts with the protein sequence (features which cannot be shifted).\" -EBI-12907955 no longer exists." - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2UolKWXxKFddysaOo70/U/1pI5k9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:WVl3z4HbM4ROl58XwRA3gRAw7m4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:A0A0S2Z5Z3 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-16435510 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:a0a0s2z5z3_human(display_long)|uniprotkb:C6orf142(gene name)|psi-mi:C6orf142(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465903 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) interpro:IPR029331|entrezgene/locuslink:90523(identity) intact:EBI-16435748(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: C6orf142_6 expression is provided in figureS2A."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:PfQUKaz+GBfRD1ufYrtnB7serb89606 rigid:AqbexUScQYtjqBs/sb4BSv3omcY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O76003 uniprotkb:A0A0S2Z341 intact:EBI-374781|uniprotkb:Q96CE0|uniprotkb:Q9P1B0|uniprotkb:Q9P1B1|uniprotkb:B3KMP7|uniprotkb:B3KMQ5|uniprotkb:Q5JV01|ensembl:ENSP00000330836|ensembl:ENSP00000357633|ensembl:ENSP00000435445|uniprotkb:D3DRG2 intact:EBI-16465919 psi-mi:glrx3_human(display_long)|uniprotkb:GLRX3(gene name)|psi-mi:GLRX3(display_short)|uniprotkb:Thioredoxin-like protein 2(gene name synonym)|uniprotkb:PKC-interacting cousin of thioredoxin(gene name synonym)|uniprotkb:PKC-theta-interacting protein(gene name synonym)|uniprotkb:PICOT(gene name synonym)|uniprotkb:HUSSY-22(orf name)|uniprotkb:TXNL2(gene name synonym) psi-mi:a0a0s2z341_human(display_long)|uniprotkb:CA9(gene name)|psi-mi:CA9(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465922 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000108010(gene)|ensembl:ENST00000331244(transcript)|ensembl:ENST00000368644(transcript)|ensembl:ENST00000481034(transcript)|go:"GO:0002026"(regulation of the force of heart contraction)|go:"GO:0003723"(RNA binding)|go:"GO:0005080"(protein kinase C binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0006879"(cellular iron ion homeostasis)|go:"GO:0010614"(negative regulation of cardiac muscle hypertrophy)|go:"GO:0030018"(Z disc)|go:"GO:0030425"(dendrite)|go:"GO:0042802"(identical protein binding)|go:"GO:0044571"([2Fe-2S] cluster assembly)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0097428"(protein maturation by iron-sulfur cluster transfer)|go:"GO:0097573"(glutathione oxidoreductase activity)|interpro:IPR002109(Glutaredoxin)|interpro:IPR004480(Glutaredoxin-related protein)|interpro:IPR013766(Thioredoxin domain)|interpro:IPR033658|interpro:IPR036249|mint:O76003|rcsb pdb:2DIY|rcsb pdb:2WZ9|rcsb pdb:2YAN|rcsb pdb:3ZYW|reactome:R-HSA-917937|refseq:NP_001186797.1|refseq:NP_006532.2|dip:DIP-31306N|entrezgene/locuslink:10539(identity) go:"GO:0004089"(carbonate dehydratase activity)|go:"GO:0008270"(zinc ion binding)|interpro:IPR001148(Carbonic anhydrase, eukaryotic)|interpro:IPR018338|interpro:IPR018429|interpro:IPR023561|interpro:IPR036398|entrezgene/locuslink:768(identity) intact:EBI-16436308(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iKUSt6zbNzzXSKvW+vXMq3hKsEM9606 rogid:EghTBTX6++a4s0rZn43UQmLE2hY9606 rigid:nGdFzILF2SgFRTtJ1UCju3LACAs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TAP6 uniprotkb:P20807-4 intact:EBI-742887|ensembl:ENSP00000262127|uniprotkb:Q658N5|uniprotkb:Q9H9U7|uniprotkb:B0YJB2|uniprotkb:B4DXG5|uniprotkb:B4DZW1 intact:EBI-11532021|ensembl:ENSP00000380384 psi-mi:cep76_human(display_long)|uniprotkb:CEP76(gene name)|psi-mi:CEP76(display_short)|uniprotkb:C18orf9(gene name synonym) psi-mi:p20807-4(display_long)|uniprotkb:CAPN3(gene name)|psi-mi:CAPN3(display_short)|uniprotkb:CANP3(gene name synonym)|uniprotkb:CANPL3(gene name synonym)|uniprotkb:Calcium-activated neutral proteinase 3(gene name synonym)|uniprotkb:Calpain L3(gene name synonym)|uniprotkb:Calpain p94(gene name synonym)|uniprotkb:Muscle-specific calcium-activated neutral protease 3(gene name synonym)|uniprotkb:NCL1(gene name synonym)|uniprotkb:New calpain 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465938 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079175.2|ensembl:ENSG00000101624(gene)|ensembl:ENST00000262127(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046599"(regulation of centriole replication)|interpro:IPR028926|interpro:IPR038765|mint:Q8TAP6|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_001258918.1|entrezgene/locuslink:79959(identity) intact:EBI-5655000(isoform-parent)|uniprotkb:P20807-4(isoform-parent)|ensembl:ENSG00000092529(gene)|ensembl:ENST00000397200(transcript)|entrezgene/locuslink:825(identity) intact:EBI-16430534(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fWzb8oIU35oVWomyDrf8u5sbxUk9606 rogid:6TrGg2jigHr0xYLsxBNCLjAl3J89606 rigid:zbx/WzOE/aQ1Pn576idO9YXdrRI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75410-7 uniprotkb:A0A0S2Z4Q5 intact:EBI-12007872|ensembl:ENSP00000428706 intact:EBI-16465731 psi-mi:o75410-7(display_long)|uniprotkb:TACC1(gene name)|psi-mi:TACC1(display_short)|uniprotkb:Gastric cancer antigen Ga55(gene name synonym)|uniprotkb:KIAA1103(gene name synonym)|uniprotkb:Taxin-1(gene name synonym) psi-mi:a0a0s2z4q5_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465734 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-624237(isoform-parent)|ensembl:ENSG00000147526(gene)|ensembl:ENST00000518415(transcript)|uniprotkb:O75410-7(isoform-parent)|entrezgene/locuslink:6867(identity) entrezgene/locuslink:8945(identity) intact:EBI-16429237(see-also)|intact:EBI-16429259(see-also)|intact:EBI-16429286(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BTRC_2 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:l8Qbl9ca/hqZkBKqQ2v6GjaAEgk9606 rogid:/y4SRSYmWMFGSM+YV0H4YbmUGxY9606 rigid:Y1E2GXW8zC78AjPtjK2jUX20nuw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96IJ6 uniprotkb:A0A0S2Z3I5 intact:EBI-750953|uniprotkb:A6NJ74|uniprotkb:A8K3Q6|uniprotkb:Q53GI0|uniprotkb:Q9NWC3|uniprotkb:Q9Y5P5|uniprotkb:B3KMT4|ensembl:ENSP00000315925|ensembl:ENSP00000340760|ensembl:ENSP00000350949|ensembl:ENSP00000363016|ensembl:ENSP00000478700|ensembl:ENSP00000506941 intact:EBI-16465708 psi-mi:gmppa_human(display_long)|uniprotkb:GMPPA(gene name)|psi-mi:GMPPA(display_short)|uniprotkb:GTP-mannose-1-phosphate guanylyltransferase alpha(gene name synonym)|uniprotkb:GDP-mannose pyrophosphorylase A(gene name synonym) psi-mi:a0a0s2z3i5_human(display_long)|uniprotkb:BTC(gene name)|psi-mi:BTC(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465715 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_037467.2|refseq:NP_995319.1|refseq:XP_005246543.1|refseq:XP_016859398.1|refseq:XP_016859399.1|refseq:XP_016859400.1|ensembl:ENSG00000144591(gene)|ensembl:ENST00000313597(transcript)|ensembl:ENST00000341142(transcript)|ensembl:ENST00000358215(transcript)|ensembl:ENST00000373908(transcript)|ensembl:ENST00000622191(transcript)|ensembl:ENST00000683946(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0009058"(biosynthetic process)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR005835(Nucleotidyl transferase)|interpro:IPR018357|interpro:IPR029044|mint:Q96IJ6|rcsb pdb:7D72|rcsb pdb:7D73|rcsb pdb:7D74|reactome:R-HSA-446205|entrezgene/locuslink:29926(identity) go:"GO:0005154"(epidermal growth factor receptor binding)|interpro:IPR015497(Epidermal growth factor receptor ligand)|refseq:NP_001303892.1|entrezgene/locuslink:685(identity) intact:EBI-16434559(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ASWzJoQB8W+e2OKYEenXpUJxflI9606 rogid:e2V7UBBKhvGhrrNRn8H+4nwIV+o9606 rigid:eXcFmDhYsdGjbCuVNz60c7s5HcE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:Q07817-2 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-11091297|ensembl:ENSP00000365223|ensembl:ENSP00000411252 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:q07817-2(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:Apoptosis regulator Bcl-X(gene name synonym)|uniprotkb:BCL2L(gene name synonym)|uniprotkb:BCLX(gene name synonym)|uniprotkb:Bcl-xS(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465692 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) ensembl:ENSG00000171552(gene)|ensembl:ENST00000376055(transcript)|ensembl:ENST00000422920(transcript)|intact:EBI-78035(isoform-parent)|uniprotkb:Q07817-2(isoform-parent)|entrezgene/locuslink:598(identity) intact:EBI-16436941(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_2 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:NuCOMqr3shrrS2ILt09VPU3WROU9606 rigid:uX21Cd9Z84JOwEn7Tevp8AddFM0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:Q07817 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-78035|intact:EBI-28978054|ensembl:ENSP00000302564|ensembl:ENSP00000365230|ensembl:ENSP00000389688|ensembl:ENSP00000390760|ensembl:ENSP00000395545|ensembl:ENSP00000401173|ensembl:ENSP00000503725|ensembl:ENSP00000504237|ensembl:ENSP00000504387|ensembl:ENSP00000504536|uniprotkb:Q5TE65|uniprotkb:Q92976|uniprotkb:Q5CZ89|uniprotkb:E1P5L6 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:b2cl1_human(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:BCL2L(gene name synonym)|uniprotkb:BCLX(gene name synonym)|uniprotkb:Apoptosis regulator Bcl-X(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465676 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) refseq:NP_001182.1|refseq:NP_612815.1|ensembl:ENSG00000171552(gene)|ensembl:ENST00000307677(transcript)|ensembl:ENST00000376062(transcript)|ensembl:ENST00000420488(transcript)|ensembl:ENST00000434194(transcript)|ensembl:ENST00000439267(transcript)|ensembl:ENST00000456404(transcript)|ensembl:ENST00000676582(transcript)|ensembl:ENST00000676942(transcript)|ensembl:ENST00000677194(transcript)|ensembl:ENST00000678563(transcript)|go:"GO:0001541"(ovarian follicle development)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006897"(endocytosis)|go:"GO:0007281"(germ cell development)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008283"(cell population proliferation)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008584"(male gonad development)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0009566"(fertilization)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019050"(suppression by virus of host apoptotic process)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034097"(response to cytokine)|go:"GO:0040008"(regulation of growth)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0046898"(response to cycloheximide)|go:"GO:0046902"(regulation of mitochondrial membrane permeability)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051434"(BH3 domain binding)|go:"GO:0051607"(defense response to virus)|go:"GO:0051881"(regulation of mitochondrial membrane potential)|go:"GO:0070584"(mitochondrion morphogenesis)|go:"GO:0071230"(cellular response to amino acid stimulus)|go:"GO:0071312"(cellular response to alkaloid)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0071839"(apoptotic process in bone marrow cell)|go:"GO:0090201"(negative regulation of release of cytochrome c from mitochondria)|go:"GO:0097136"(Bcl-2 family protein complex)|go:"GO:0097192"(extrinsic apoptotic signaling pathway in absence of ligand)|go:"GO:0097284"(hepatocyte apoptotic process)|go:"GO:1900118"(negative regulation of execution phase of apoptosis)|go:"GO:1902042"(negative regulation of extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:1902230"(negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:1902236"(negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903077"(negative regulation of protein localization to plasma membrane)|go:"GO:2000811"(negative regulation of anoikis)|go:"GO:2001240"(negative regulation of extrinsic apoptotic signaling pathway in absence of ligand)|go:"GO:2001243"(negative regulation of intrinsic apoptotic signaling pathway)|interpro:IPR002475(BCL2-like apoptosis inhibitor)|interpro:IPR003093(Apoptosis regulator Bcl-2 protein, BH4)|interpro:IPR004725(Apoptosis regulator Bcl-X protein)|interpro:IPR013279(Apoptosis regulator, Bcl-X)|interpro:IPR020717|interpro:IPR020726|interpro:IPR020728|interpro:IPR020731|interpro:IPR026298|interpro:IPR036834|mint:Q07817|rcsb pdb:1BXL|rcsb pdb:1G5J|rcsb pdb:1LXL|rcsb pdb:1MAZ|rcsb pdb:1R2D|rcsb pdb:1R2E|rcsb pdb:1R2G|rcsb pdb:1R2H|rcsb pdb:1R2I|rcsb pdb:1YSG|rcsb pdb:1YSI|rcsb pdb:1YSN|rcsb pdb:2B48|rcsb pdb:2LP8|rcsb pdb:2LPC|rcsb pdb:2M03|rcsb pdb:2M04|rcsb pdb:2ME8|rcsb pdb:2ME9|rcsb pdb:2MEJ|rcsb pdb:2O1Y|rcsb pdb:2O2M|rcsb pdb:2O2N|rcsb pdb:2P1L|rcsb pdb:2PON|rcsb pdb:2YJ1|rcsb pdb:2YQ6|rcsb pdb:2YQ7|rcsb pdb:2YXJ|rcsb pdb:3CVA|rcsb pdb:3FDL|rcsb pdb:3FDM|rcsb pdb:3INQ|rcsb pdb:3IO8|rcsb pdb:3PL7|rcsb pdb:3QKD|rcsb pdb:3R85|rcsb pdb:6IJQ|rcsb pdb:6LHD|rcsb pdb:6O0K|rcsb pdb:6O0L|rcsb pdb:6O0M|rcsb pdb:6O0O|rcsb pdb:6O0P|rcsb pdb:6RNU|rcsb pdb:6ST2|rcsb pdb:6UVC|rcsb pdb:6UVD|rcsb pdb:6UVE|rcsb pdb:6UVF|rcsb pdb:6UVG|rcsb pdb:6UVH|rcsb pdb:6VWC|rcsb pdb:6X7I|rcsb pdb:6YLI|rcsb pdb:6ZHC|rcsb pdb:7CA4|rcsb pdb:7JGV|rcsb pdb:7JGW|rcsb pdb:7LH7|reactome:R-HSA-111453|reactome:R-HSA-6785807|reactome:R-HSA-844455|reactome:R-HSA-9648002|reactome:R-HSA-9702518|rcsb pdb:3SP7|rcsb pdb:3SPF|rcsb pdb:3WIZ|rcsb pdb:3ZK6|rcsb pdb:3ZLN|rcsb pdb:6F46|rcsb pdb:6HJL|rcsb pdb:3ZLO|rcsb pdb:3ZLR|rcsb pdb:4A1U|rcsb pdb:4A1W|rcsb pdb:4AQ3|rcsb pdb:4BPK|rcsb pdb:4C52|rcsb pdb:4C5D|rcsb pdb:4CIN|rcsb pdb:4EHR|rcsb pdb:4HNJ|rcsb pdb:4IEH|rcsb pdb:4PPI|rcsb pdb:4QVE|rcsb pdb:4QVF|rcsb pdb:4QVX|rcsb pdb:4TUH|rcsb pdb:4Z9V|rcsb pdb:5AGW|rcsb pdb:5AGX|rcsb pdb:5B1Z|rcsb pdb:5C3G|rcsb pdb:5FMJ|rcsb pdb:5FMK|rcsb pdb:5VAY|rcsb pdb:5VX3|rcsb pdb:6BF2|rcsb pdb:6DCN|rcsb pdb:6DCO|ensembl:ENSP00000365223|ensembl:ENSP00000365230|ensembl:ENSP00000390760|ensembl:ENST00000376055|ensembl:ENST00000422920|ensembl:ENSP00000411252|ensembl:ENSP00000401173|ensembl:ENSP00000389688|ensembl:ENSP00000395545|ensembl:ENSP00000503725|ensembl:ENSP00000504536|ensembl:ENSP00000504387|ensembl:ENSP00000504237|ensembl:ENSP00000302564|refseq:NP_001304848.1|refseq:NP_001304849.1|refseq:NP_001304850.1|refseq:NP_001309168.1|refseq:NP_001309169.1|refseq:NP_001309171.1|refseq:XP_011527266.1|refseq:XP_016883482.1|dip:DIP-30916N|entrezgene/locuslink:598(identity) intact:EBI-16436941(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_1 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:lDDsMUf2W6uLKpfM3h4N364tpWg9606 rigid:349mrjMS6yPo8eQPu2qSoZiPagM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13323 uniprotkb:Q07817-2 intact:EBI-700794|uniprotkb:Q16582|uniprotkb:Q6FH93|ensembl:ENSP00000216115 intact:EBI-11091297|ensembl:ENSP00000365223|ensembl:ENSP00000411252 psi-mi:bik_human(display_long)|uniprotkb:Apoptosis inducer NBK(gene name synonym)|uniprotkb:BP4(gene name synonym)|uniprotkb:BIP1(gene name synonym)|uniprotkb:BIK(gene name)|psi-mi:BIK(display_short)|uniprotkb:NBK(gene name synonym) psi-mi:q07817-2(display_long)|uniprotkb:BCL2L1(gene name)|psi-mi:BCL2L1(display_short)|uniprotkb:Apoptosis regulator Bcl-X(gene name synonym)|uniprotkb:BCL2L(gene name synonym)|uniprotkb:BCLX(gene name synonym)|uniprotkb:Bcl-xS(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465659 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001188.1|dip:DIP-928N|ensembl:ENSG00000100290(gene)|ensembl:ENST00000216115(transcript)|go:"GO:0006915"(apoptotic process)|go:"GO:0008584"(male gonad development)|go:"GO:0008637"(apoptotic mitochondrial changes)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031334"(positive regulation of protein-containing complex assembly)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|interpro:IPR020728|interpro:IPR024579|rcsb pdb:2IPE|entrezgene/locuslink:638(identity) ensembl:ENSG00000171552(gene)|ensembl:ENST00000376055(transcript)|ensembl:ENST00000422920(transcript)|intact:EBI-78035(isoform-parent)|uniprotkb:Q07817-2(isoform-parent)|entrezgene/locuslink:598(identity) intact:EBI-16433829(see-also)|intact:EBI-16433839(see-also) - - comment:"Evidence for isoform CCSB isoform ID: BCL2L1_2 expression is provided in figureS2F."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M34Yl66KzkhNSq7e3WKQMb6WDqU9606 rogid:NuCOMqr3shrrS2ILt09VPU3WROU9606 rigid:9pFUlsrK0+X5qdQyZNT821PTDmM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WWW0-2 uniprotkb:B7Z3H4 intact:EBI-960502|ensembl:ENSP00000462576 intact:EBI-16429269|ensembl:ENSP00000377088 psi-mi:q8www0-2(display_long)|uniprotkb:B(isoform synonym)|uniprotkb:RASSF5(gene name)|psi-mi:RASSF5(display_short)|uniprotkb:NORE1(gene name synonym)|uniprotkb:RAPL(gene name synonym)|uniprotkb:New ras effector 1(gene name synonym)|uniprotkb:Regulator for cell adhesion and polarization enriched in lymphoid tissues(gene name synonym) psi-mi:b7z3h4_human(display_long)|uniprotkb:BTRC(gene name)|psi-mi:BTRC(display_short)|uniprotkb:hCG_1811016(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465769 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-367390(q8www0_human)|ensembl:ENSG00000266094(gene)|ensembl:ENST00000577571(transcript)|uniprotkb:Q8WWW0-2(isoform-parent)|entrezgene/locuslink:83593(identity) ensembl:ENSG00000166167(gene)|ensembl:ENST00000393441(transcript)|go:"GO:0046983"(protein dimerization activity)|interpro:IPR001680(WD40 repeat)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR021977|interpro:IPR036047|interpro:IPR036322|refseq:NP_001243785.1|entrezgene/locuslink:8945(identity) intact:EBI-16430021(see-also)|intact:EBI-16430031(see-also) isoform-comment:Initiator Met-1 is removed. Contains a N-acetylthreonine at position 2. - comment:"Evidence for isoform CCSB isoform ID: BTRC_4 expression is provided in figure2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zcc13rWLmCPQVfU4D6bvIiAnIbc9606 rogid:IbM+YU1ikaWXnOc33Set3iX0O+Q9606 rigid:Ldmv65EjGabKFtCADqD1QeRZWZA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C040 uniprotkb:A0A0S2Z535 intact:EBI-749840|uniprotkb:O60272|uniprotkb:Q9BSI9|uniprotkb:Q9UFZ1|ensembl:ENSP00000415812|ensembl:ENSP00000501586|ensembl:ENSP00000501612|ensembl:ENSP00000501652|ensembl:ENSP00000501662|ensembl:ENSP00000501792|ensembl:ENSP00000501822|ensembl:ENSP00000501951|ensembl:ENSP00000501994|ensembl:ENSP00000502089|ensembl:ENSP00000502114|ensembl:ENSP00000502159|ensembl:ENSP00000502273|ensembl:ENSP00000502348|ensembl:ENSP00000502356|ensembl:ENSP00000502519|ensembl:ENSP00000502543|ensembl:ENSP00000502676|uniprotkb:D3DP09 intact:EBI-16466123 psi-mi:trim2_human(display_long)|uniprotkb:RING finger protein 86(gene name synonym)|uniprotkb:TRIM2(gene name)|psi-mi:TRIM2(display_short)|uniprotkb:KIAA0517(gene name synonym)|uniprotkb:RNF86(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM2(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRIM2(gene name synonym) psi-mi:a0a0s2z535_human(display_long)|uniprotkb:CDK20(gene name)|psi-mi:CDK20(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466134 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001123539.1|refseq:NP_056086.2|ensembl:ENST00000437508(transcript)|ensembl:ENST00000674874(transcript)|ensembl:ENST00000674876(transcript)|ensembl:ENSG00000109654(gene)|refseq:XP_016863433.1|refseq:XP_016863434.1|refseq:XP_016863437.1|refseq:XP_016863438.1|refseq:XP_016863439.1|refseq:XP_016863440.1|refseq:XP_016863441.1|ensembl:ENST00000674976(transcript)|ensembl:ENST00000675054(transcript)|ensembl:ENST00000675159(transcript)|ensembl:ENST00000675293(transcript)|ensembl:ENST00000675315(transcript)|ensembl:ENST00000675384(transcript)|ensembl:ENST00000675745(transcript)|ensembl:ENST00000675835(transcript)|ensembl:ENST00000676172(transcript)|ensembl:ENST00000676252(transcript)|ensembl:ENST00000676264(transcript)|ensembl:ENST00000676348(transcript)|ensembl:ENST00000676374(transcript)|ensembl:ENST00000676423(transcript)|ensembl:ENST00000676458(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR017868|interpro:IPR017907|interpro:IPR027370|mint:Q9C040|rcsb pdb:7B2R|reactome:R-HSA-877300|go:"GO:0043523"(regulation of neuron apoptotic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001258(NHL repeat)|interpro:IPR001298(Filamin/ABP280 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR011042(Six-bladed beta-propeller, TolB-like)|interpro:IPR013017(NHL repeat, subgroup)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:23321(identity) go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|interpro:IPR011009(Protein kinase-like)|interpro:IPR000719(Protein kinase, core)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|entrezgene/locuslink:23552(identity) intact:EBI-16432961(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vcyraMhX0YqrCi9PXhvlJ7QqhGs9606 rogid:bNr8fCnUh6JVd1nweyJnl1vRq1U9606 rigid:RAHCkB0+YYLFoW7ICeJTbEGiVtk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C040 uniprotkb:Q8IZL9-5 intact:EBI-749840|uniprotkb:O60272|uniprotkb:Q9BSI9|uniprotkb:Q9UFZ1|ensembl:ENSP00000415812|ensembl:ENSP00000501586|ensembl:ENSP00000501612|ensembl:ENSP00000501652|ensembl:ENSP00000501662|ensembl:ENSP00000501792|ensembl:ENSP00000501822|ensembl:ENSP00000501951|ensembl:ENSP00000501994|ensembl:ENSP00000502089|ensembl:ENSP00000502114|ensembl:ENSP00000502159|ensembl:ENSP00000502273|ensembl:ENSP00000502348|ensembl:ENSP00000502356|ensembl:ENSP00000502519|ensembl:ENSP00000502543|ensembl:ENSP00000502676|uniprotkb:D3DP09 intact:EBI-16466096|ensembl:ENSP00000365043 psi-mi:trim2_human(display_long)|uniprotkb:RING finger protein 86(gene name synonym)|uniprotkb:TRIM2(gene name)|psi-mi:TRIM2(display_short)|uniprotkb:KIAA0517(gene name synonym)|uniprotkb:RNF86(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM2(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRIM2(gene name synonym) psi-mi:q8izl9-5(display_long)|uniprotkb:CDK-activating kinase p42(gene name synonym)|uniprotkb:Cell cycle-related kinase(gene name synonym)|uniprotkb:Cell division protein kinase 20(gene name synonym)|uniprotkb:Cyclin-dependent protein kinase H(gene name synonym)|uniprotkb:Cyclin-kinase-activating kinase p42(gene name synonym)|uniprotkb:CDK20(gene name)|psi-mi:CDK20(display_short)|uniprotkb:CCRK(gene name synonym)|uniprotkb:CDCH(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466104 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001123539.1|refseq:NP_056086.2|ensembl:ENST00000437508(transcript)|ensembl:ENST00000674874(transcript)|ensembl:ENST00000674876(transcript)|ensembl:ENSG00000109654(gene)|refseq:XP_016863433.1|refseq:XP_016863434.1|refseq:XP_016863437.1|refseq:XP_016863438.1|refseq:XP_016863439.1|refseq:XP_016863440.1|refseq:XP_016863441.1|ensembl:ENST00000674976(transcript)|ensembl:ENST00000675054(transcript)|ensembl:ENST00000675159(transcript)|ensembl:ENST00000675293(transcript)|ensembl:ENST00000675315(transcript)|ensembl:ENST00000675384(transcript)|ensembl:ENST00000675745(transcript)|ensembl:ENST00000675835(transcript)|ensembl:ENST00000676172(transcript)|ensembl:ENST00000676252(transcript)|ensembl:ENST00000676264(transcript)|ensembl:ENST00000676348(transcript)|ensembl:ENST00000676374(transcript)|ensembl:ENST00000676423(transcript)|ensembl:ENST00000676458(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR017868|interpro:IPR017907|interpro:IPR027370|mint:Q9C040|rcsb pdb:7B2R|reactome:R-HSA-877300|go:"GO:0043523"(regulation of neuron apoptotic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001258(NHL repeat)|interpro:IPR001298(Filamin/ABP280 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR011042(Six-bladed beta-propeller, TolB-like)|interpro:IPR013017(NHL repeat, subgroup)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:23321(identity) intact:EBI-6128565(isoform-parent)|ensembl:ENSG00000156345(gene)|ensembl:ENST00000375883(transcript)|entrezgene/locuslink:23552(identity) intact:EBI-16432961(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vcyraMhX0YqrCi9PXhvlJ7QqhGs9606 rogid:8/Rfk69ifNEUfBSw6ZmO3XtVpR49606 rigid:ln15B++HH1aVtBp2Icj2CUXlMPA true - sufficient binding region:1-284 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C040 uniprotkb:Q8IZL9-3 intact:EBI-749840|uniprotkb:O60272|uniprotkb:Q9BSI9|uniprotkb:Q9UFZ1|ensembl:ENSP00000415812|ensembl:ENSP00000501586|ensembl:ENSP00000501612|ensembl:ENSP00000501652|ensembl:ENSP00000501662|ensembl:ENSP00000501792|ensembl:ENSP00000501822|ensembl:ENSP00000501951|ensembl:ENSP00000501994|ensembl:ENSP00000502089|ensembl:ENSP00000502114|ensembl:ENSP00000502159|ensembl:ENSP00000502273|ensembl:ENSP00000502348|ensembl:ENSP00000502356|ensembl:ENSP00000502519|ensembl:ENSP00000502543|ensembl:ENSP00000502676|uniprotkb:D3DP09 intact:EBI-16466072|ensembl:ENSP00000474485 psi-mi:trim2_human(display_long)|uniprotkb:RING finger protein 86(gene name synonym)|uniprotkb:TRIM2(gene name)|psi-mi:TRIM2(display_short)|uniprotkb:KIAA0517(gene name synonym)|uniprotkb:RNF86(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM2(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRIM2(gene name synonym) psi-mi:q8izl9-3(display_long)|uniprotkb:CDK-activating kinase p42(gene name synonym)|uniprotkb:Cell cycle-related kinase(gene name synonym)|uniprotkb:Cell division protein kinase 20(gene name synonym)|uniprotkb:Cyclin-dependent protein kinase H(gene name synonym)|uniprotkb:Cyclin-kinase-activating kinase p42(gene name synonym)|uniprotkb:CDK20(gene name)|psi-mi:CDK20(display_short)|uniprotkb:CCRK(gene name synonym)|uniprotkb:CDCH(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466080 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001123539.1|refseq:NP_056086.2|ensembl:ENST00000437508(transcript)|ensembl:ENST00000674874(transcript)|ensembl:ENST00000674876(transcript)|ensembl:ENSG00000109654(gene)|refseq:XP_016863433.1|refseq:XP_016863434.1|refseq:XP_016863437.1|refseq:XP_016863438.1|refseq:XP_016863439.1|refseq:XP_016863440.1|refseq:XP_016863441.1|ensembl:ENST00000674976(transcript)|ensembl:ENST00000675054(transcript)|ensembl:ENST00000675159(transcript)|ensembl:ENST00000675293(transcript)|ensembl:ENST00000675315(transcript)|ensembl:ENST00000675384(transcript)|ensembl:ENST00000675745(transcript)|ensembl:ENST00000675835(transcript)|ensembl:ENST00000676172(transcript)|ensembl:ENST00000676252(transcript)|ensembl:ENST00000676264(transcript)|ensembl:ENST00000676348(transcript)|ensembl:ENST00000676374(transcript)|ensembl:ENST00000676423(transcript)|ensembl:ENST00000676458(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR017868|interpro:IPR017907|interpro:IPR027370|mint:Q9C040|rcsb pdb:7B2R|reactome:R-HSA-877300|go:"GO:0043523"(regulation of neuron apoptotic process)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001258(NHL repeat)|interpro:IPR001298(Filamin/ABP280 repeat)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR011042(Six-bladed beta-propeller, TolB-like)|interpro:IPR013017(NHL repeat, subgroup)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:23321(identity) intact:EBI-6128565(isoform-parent)|ensembl:ENSG00000156345(gene)|ensembl:ENST00000605159(transcript)|entrezgene/locuslink:23552(identity) intact:EBI-16432961(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vcyraMhX0YqrCi9PXhvlJ7QqhGs9606 rogid:mzVgLqbO3Gx5NNkSScj/30Q6PkI9606 rigid:jHbYac9KDRaDIeBQjd6t/DiRLl0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96BA8 uniprotkb:Q8TCZ2 intact:EBI-6942903|ensembl:ENSP00000481956|intact:MINT-268046|intact:MINT-8162577|uniprotkb:Q8N2D5|uniprotkb:Q96CP0 intact:EBI-2824782|uniprotkb:B3KWG2|uniprotkb:E7EMK5|uniprotkb:A8K2D5|uniprotkb:Q9BQG9|uniprotkb:Q8TCZ0|uniprotkb:Q8TCZ1|uniprotkb:Q8TAW2|uniprotkb:A8K5R0|ensembl:ENSP00000359403|uniprotkb:B4DDL7|uniprotkb:E9PD27 psi-mi:cr3l1_human(display_long)|uniprotkb:CREB3L1(gene name)|psi-mi:CREB3L1(display_short)|uniprotkb:OASIS(gene name synonym)|uniprotkb:PSEC0238(orf name)|uniprotkb:Old astrocyte specifically-induced substance(gene name synonym) psi-mi:c99l2_human(display_long)|uniprotkb:CD99L2(gene name)|psi-mi:CD99L2(display_short)|uniprotkb:MIC2L1(gene name synonym)|uniprotkb:MIC2-like protein 1(gene name synonym)|uniprotkb:UNQ1964/PRO4486(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466056 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000157613(gene)|ensembl:ENST00000621158(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0032967"(positive regulation of collagen biosynthetic process)|go:"GO:0035497"(cAMP response element binding)|go:"GO:0040037"(negative regulation of fibroblast growth factor receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046332"(SMAD binding)|go:"GO:0070278"(extracellular matrix constituent secretion)|go:"GO:1902236"(negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903671"(negative regulation of sprouting angiogenesis)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR004827("Basic-leucine zipper (bZIP) transcription factor")|interpro:IPR029805|mint:Q96BA8|reactome:R-HSA-8874211|refseq:NP_443086.1|entrezgene/locuslink:90993(identity) refseq:XP_011529504.1|ensembl:ENSG00000102181(gene)|ensembl:ENST00000370377(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007155"(cell adhesion)|go:"GO:0016021"(integral component of membrane)|interpro:IPR022078|reactome:R-HSA-202733|refseq:NP_001171737.1|refseq:NP_001229543.1|refseq:NP_113650.2|refseq:NP_604394.1|refseq:NP_604395.1|entrezgene/locuslink:83692(identity) intact:EBI-16438188(see-also) comment:mint|function:"Transcription factor that acts during endoplasmic reticulum stress by activating unfolded protein response target genes. Specifically involved in ER-stress response in astrocytes in the central nervous system (By similartity). May play a role in gliosis. In vitro, binds to box-B element, cAMP response element (CRE) and CRE-like sequences, and activates transcription through box-B element but not through CRE" - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:sMWUFmBeBBCO+T0Y2CuB/un1lBg9606 rogid:cOdUpR8H6oxHn9UfccggMMm1Z2Q9606 rigid:LBAu+8JribIhl/WWeNW/Nntefpw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRI3 uniprotkb:Q8TCZ2 intact:EBI-8644112|ensembl:ENSP00000363396|intact:MINT-8163383|uniprotkb:Q71RC8 intact:EBI-2824782|uniprotkb:B3KWG2|uniprotkb:E7EMK5|uniprotkb:A8K2D5|uniprotkb:Q9BQG9|uniprotkb:Q8TCZ0|uniprotkb:Q8TCZ1|uniprotkb:Q8TAW2|uniprotkb:A8K5R0|ensembl:ENSP00000359403|uniprotkb:B4DDL7|uniprotkb:E9PD27 psi-mi:znt2_human(display_long)|uniprotkb:SLC30A2(gene name)|psi-mi:SLC30A2(display_short)|uniprotkb:Solute carrier family 30 member 2(gene name synonym)|uniprotkb:ZNT2(gene name synonym) psi-mi:c99l2_human(display_long)|uniprotkb:CD99L2(gene name)|psi-mi:CD99L2(display_short)|uniprotkb:MIC2L1(gene name synonym)|uniprotkb:MIC2-like protein 1(gene name synonym)|uniprotkb:UNQ1964/PRO4486(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466040 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158014(gene)|ensembl:ENST00000374278(transcript)|go:"GO:0005385"(zinc ion transmembrane transporter activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0010043"(response to zinc ion)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0061090"(positive regulation of sequestering of zinc ion)|go:"GO:0071577"(zinc ion transmembrane transport)|interpro:IPR002524(Cation efflux protein)|interpro:IPR027469|interpro:IPR036837|reactome:R-HSA-435368|refseq:NP_001004434.1|refseq:NP_115902.1|entrezgene/locuslink:7780(identity) refseq:XP_011529504.1|ensembl:ENSG00000102181(gene)|ensembl:ENST00000370377(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007155"(cell adhesion)|go:"GO:0016021"(integral component of membrane)|interpro:IPR022078|reactome:R-HSA-202733|refseq:NP_001171737.1|refseq:NP_001229543.1|refseq:NP_113650.2|refseq:NP_604394.1|refseq:NP_604395.1|entrezgene/locuslink:83692(identity) intact:EBI-16434931(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E8UyE30F1s0H0A4awhgqZ6MIEuU9606 rogid:cOdUpR8H6oxHn9UfccggMMm1Z2Q9606 rigid:tf6rjO6yp1ZvueG+S880wOt+Y/0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43765 uniprotkb:A0A0S2Z5R8 intact:EBI-347996|ensembl:ENSP00000221566|ensembl:ENSP00000503397|ensembl:ENSP00000504495|uniprotkb:Q9BTZ9|intact:EBI-1045243|uniprotkb:Q6FIA9|uniprotkb:D6W610 intact:EBI-16434925 psi-mi:sgta_human(display_long)|uniprotkb:SGTA(gene name)|psi-mi:SGTA(display_short)|uniprotkb:SGT(gene name synonym)|uniprotkb:Alpha-SGT(gene name synonym)|uniprotkb:Vpu-binding protein(gene name synonym)|uniprotkb:SGT1(gene name synonym) psi-mi:a0a0s2z5r8_human(display_long)|uniprotkb:CD99L2(gene name)|psi-mi:CD99L2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466024 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:4CPG|rcsb pdb:4GOD|rcsb pdb:4GOE|rcsb pdb:4GOF|reactome:R-HSA-9609523|rcsb pdb:2VYI|ensembl:ENSG00000104969(gene)|ensembl:ENST00000221566(transcript)|ensembl:ENST00000676943(transcript)|ensembl:ENST00000677149(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006620"(posttranslational protein targeting to endoplasmic reticulum membrane)|go:"GO:0016020"(membrane)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0071816"(tail-anchored membrane protein insertion into ER membrane)|go:"GO:0072380"(TRC complex)|go:"GO:0098850"(extrinsic component of synaptic vesicle membrane)|go:"GO:1903070"(negative regulation of ER-associated ubiquitin-dependent protein catabolic process)|go:"GO:1903071"(positive regulation of ER-associated ubiquitin-dependent protein catabolic process)|go:"GO:1903646"(positive regulation of chaperone-mediated protein folding)|go:"GO:1904288"(BAT3 complex binding)|go:"GO:2000059"(negative regulation of ubiquitin-dependent protein catabolic process)|interpro:IPR001440(Tetratricopeptide TPR-1)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR032374|mint:O43765|refseq:XP_011526480.1|refseq:NP_003012.1|entrezgene/locuslink:6449(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR022078|entrezgene/locuslink:83692(identity) intact:EBI-16434057(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:r/Cyj4UJk/cS8QdrbjhTZMPCigI9606 rogid:h2nTTqEOlXrDcArFAaSjcDJDju49606 rigid:brRCihx/XTqw59QsNiqCMTTKe+E true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0 uniprotkb:A0A0S2Z5R8 intact:EBI-741480|uniprotkb:Q8IXS9|uniprotkb:Q8N2Q3|uniprotkb:Q9H0T8|uniprotkb:Q9H3R4|uniprotkb:Q9HAZ5|intact:EBI-28967608|ensembl:ENSP00000365576|uniprotkb:Q5T6J5|uniprotkb:Q5T6J9|uniprotkb:A0A024R284 intact:EBI-16434925 psi-mi:ubql1_human(display_long)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym) psi-mi:a0a0s2z5r8_human(display_long)|uniprotkb:CD99L2(gene name)|psi-mi:CD99L2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466008 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000257468|ensembl:ENSP00000257468|ensembl:ENSP00000365576|ensembl:ENSG00000135018(gene)|ensembl:ENST00000376395(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000502"(proteasome complex)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016235"(aggresome)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019900"(kinase binding)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035973"(aggrephagy)|go:"GO:0042802"(identical protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0097352"(autophagosome maturation)|go:"GO:1901340"(negative regulation of store-operated calcium channel activity)|go:"GO:1902175"(regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903071"(positive regulation of ER-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000626(Ubiquitin)|interpro:IPR006636(Heat shock chaperonin-binding)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR028430|interpro:IPR029071|mint:Q9UMX0|rcsb pdb:2JY5|rcsb pdb:2JY6|rcsb pdb:2KLC|reactome:R-HSA-8856825|refseq:NP_038466.2|refseq:NP_444295.1|dip:DIP-41629N|entrezgene/locuslink:29979(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR022078|entrezgene/locuslink:83692(identity) intact:EBI-16432790(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nCFfZbGCTvRYaXhQ4R99XblslvM9606 rogid:h2nTTqEOlXrDcArFAaSjcDJDju49606 rigid:P98P5AiwDt/mdctHeYlXN1mHfz8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:A0A0S2Z5R8 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16434925 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:a0a0s2z5r8_human(display_long)|uniprotkb:CD99L2(gene name)|psi-mi:CD99L2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465992 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR022078|entrezgene/locuslink:83692(identity) intact:EBI-16431106(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:h2nTTqEOlXrDcArFAaSjcDJDju49606 rigid:Frs+yUg7yJ0yHSxIQOC/JWh9uZ0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P42575 uniprotkb:A0A0S2Z3I0 intact:EBI-520342|ensembl:ENSP00000312664|uniprotkb:P42576|uniprotkb:D3DXD6|uniprotkb:Q59F21|uniprotkb:Q7KZL6|uniprotkb:Q86UJ3|uniprotkb:Q9BUP7|uniprotkb:Q9BZK9|uniprotkb:A8K5F9|uniprotkb:E9PDN0|uniprotkb:Q9BZL0 intact:EBI-16465973 psi-mi:casp2_human(display_long)|uniprotkb:Protease ICH-1(gene name synonym)|uniprotkb:Neural precursor cell expressed developmentally down-regulated protein 2(gene name synonym)|uniprotkb:CASP2(gene name)|psi-mi:CASP2(display_short)|uniprotkb:ICH1(gene name synonym)|uniprotkb:NEDD2(gene name synonym) psi-mi:a0a0s2z3i0_human(display_long)|uniprotkb:CASP2(gene name)|psi-mi:CASP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465976 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000106144(gene)|ensembl:ENST00000310447(transcript)|go:"GO:0001554"(luteolysis)|go:"GO:0003407"(neural retina development)|go:"GO:0004197"(cysteine-type endopeptidase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0006977"(DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest)|go:"GO:0007420"(brain development)|go:"GO:0007568"(aging)|go:"GO:0008630"(intrinsic apoptotic signaling pathway in response to DNA damage)|go:"GO:0016020"(membrane)|go:"GO:0016485"(protein processing)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0035234"(ectopic germ cell programmed cell death)|go:"GO:0042802"(identical protein binding)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0097153"(cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0097190"(apoptotic signaling pathway)|go:"GO:0097192"(extrinsic apoptotic signaling pathway in absence of ligand)|go:"GO:0097194"(execution phase of apoptosis)|go:"GO:0097199"(cysteine-type endopeptidase activity involved in apoptotic signaling pathway)|go:"GO:0097200"(cysteine-type endopeptidase activity involved in execution phase of apoptosis)|go:"GO:2001235"(positive regulation of apoptotic signaling pathway)|interpro:IPR001309(Peptidase C14, ICE, catalytic subunit p20)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR002138(Peptidase C14, caspase non-catalytic subunit p10)|interpro:IPR002398(Peptidase C14, caspase precursor p45)|interpro:IPR011029(DEATH-like)|interpro:IPR015917(Peptidase C14, caspase precursor p45, core)|interpro:IPR016129(Peptidase C14, ICE, catalytic subunit p20, active site)|interpro:IPR029030|interpro:IPR033139|interpro:IPR035702|rcsb pdb:1PYO|rcsb pdb:2P2C|rcsb pdb:3R5J|rcsb pdb:3R6G|rcsb pdb:3R6L|rcsb pdb:3R7B|rcsb pdb:3R7N|refseq:NP_001215.1|refseq:NP_116764.2|refseq:NP_116765.2|rcsb pdb:3R7S|rcsb pdb:3RJM|rcsb pdb:6GKF|rcsb pdb:6GKG|rcsb pdb:6S9K|rcsb pdb:6SAD|rcsb pdb:6Y8B|rcsb pdb:6Y8D|reactome:R-HSA-168638|reactome:R-HSA-205025|reactome:R-HSA-6803207|entrezgene/locuslink:835(identity) go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR011029(DEATH-like)|entrezgene/locuslink:835(identity) intact:EBI-16433486(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3WFvmDoYbW3J84Yd9RVGAOcR8ig9606 rogid:ckpVZUI1KmwvIG8BejUQJBKJ5Zk9606 rigid:wo+/Z9AOwRB5k6/5zbJn1XZZ0rc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TAP6 uniprotkb:P20807-2 intact:EBI-742887|ensembl:ENSP00000262127|uniprotkb:Q658N5|uniprotkb:Q9H9U7|uniprotkb:B0YJB2|uniprotkb:B4DXG5|uniprotkb:B4DZW1 intact:EBI-16433991|ensembl:ENSP00000183936 psi-mi:cep76_human(display_long)|uniprotkb:CEP76(gene name)|psi-mi:CEP76(display_short)|uniprotkb:C18orf9(gene name synonym) psi-mi:p20807-2(display_long)|uniprotkb:Calcium-activated neutral proteinase 3(gene name synonym)|uniprotkb:Calpain L3(gene name synonym)|uniprotkb:Calpain p94(gene name synonym)|uniprotkb:Muscle-specific calcium-activated neutral protease 3(gene name synonym)|uniprotkb:New calpain 1(gene name synonym)|uniprotkb:CAPN3(gene name)|psi-mi:CAPN3(display_short)|uniprotkb:CANP3(gene name synonym)|uniprotkb:CANPL3(gene name synonym)|uniprotkb:NCL1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16465954 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079175.2|ensembl:ENSG00000101624(gene)|ensembl:ENST00000262127(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046599"(regulation of centriole replication)|interpro:IPR028926|interpro:IPR038765|mint:Q8TAP6|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_001258918.1|entrezgene/locuslink:79959(identity) intact:EBI-5655000(isoform-parent)|ensembl:ENSG00000092529(gene)|ensembl:ENST00000349748(transcript)|entrezgene/locuslink:825(identity) intact:EBI-16430534(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fWzb8oIU35oVWomyDrf8u5sbxUk9606 rogid:Gp5IWqWrBXlXLtZ/K/fkkGHncHc9606 rigid:NzbxgrxZr704cltpDah83mavur8 true - sufficient binding region:465-729 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P30279 uniprotkb:Q00535-2 intact:EBI-748789|uniprotkb:Q13955|uniprotkb:Q5U035|uniprotkb:A8K531|ensembl:ENSP00000261254|ensembl:ENSP00000502597|ensembl:ENSP00000502654 intact:EBI-16466150|ensembl:ENSP00000297518 psi-mi:ccnd2_human(display_long)|uniprotkb:CCND2(gene name)|psi-mi:CCND2(display_short) psi-mi:q00535-2(display_long)|uniprotkb:Cell division protein kinase 5(gene name synonym)|uniprotkb:Serine/threonine-protein kinase PSSALRE(gene name synonym)|uniprotkb:Tau protein kinase II catalytic subunit(gene name synonym)|uniprotkb:CDK5-SV(isoform synonym)|uniprotkb:CDK5(gene name)|psi-mi:CDK5(display_short)|uniprotkb:CDKN5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466158 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001750.1|ensembl:ENSG00000118971(gene)|ensembl:ENST00000261254(transcript)|ensembl:ENST00000676279(transcript)|ensembl:ENST00000676411(transcript)|go:"GO:0000079"(regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0000785"(chromatin)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0045737"(positive regulation of cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0051301"(cell division)|go:"GO:0071481"(cellular response to X-ray)|go:"GO:0097129"(cyclin D2-CDK4 complex)|go:"GO:1900087"(positive regulation of G1/S transition of mitotic cell cycle)|interpro:IPR004367(Cyclin, C-terminal)|interpro:IPR006671(Cyclin, N-terminal)|interpro:IPR013763(Cyclin-related)|interpro:IPR015451(Cyclin D)|interpro:IPR036915|interpro:IPR039361|mint:P30279|rcsb pdb:6EI2|reactome:R-HSA-69231|reactome:R-HSA-8934593|reactome:R-HSA-9661069|go:"GO:0005829"(cytosol)|go:"GO:0007616"(long-term memory)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008344"(adult locomotory behavior)|go:"GO:0016538"(cyclin-dependent protein serine/threonine kinase regulator activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044772"(mitotic cell cycle phase transition)|dip:DIP-178N|entrezgene/locuslink:894(identity) ensembl:ENSG00000164885(gene)|ensembl:ENST00000297518(transcript)|intact:EBI-1041567(isoform-parent)|entrezgene/locuslink:1020(identity) intact:EBI-16437667(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7DtKJiw07/E5uNvUagbYbcAo7kM9606 rogid:pxKjln6Un7Mq+4T2JOI8igx0S2E9606 rigid:4Vi5IuVIlpqvnkHKxznyiW+w2MA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15645 uniprotkb:P27918 intact:EBI-358993|uniprotkb:C9K0T3|uniprotkb:O15324|ensembl:ENSP00000166345|uniprotkb:D3DTC0 intact:EBI-9038570|uniprotkb:O15134|uniprotkb:O15135|uniprotkb:O15136|uniprotkb:O75826|ensembl:ENSP00000247153|ensembl:ENSP00000380189 psi-mi:pch2_human(display_long)|uniprotkb:TRIP13(gene name)|psi-mi:TRIP13(display_short)|uniprotkb:Thyroid receptor-interacting protein 13(gene name synonym)|uniprotkb:PCH2(gene name synonym)|uniprotkb:Thyroid hormone receptor interactor 13(gene name synonym)|uniprotkb:Human papillomavirus type 16 E1 protein-binding protein(gene name synonym) psi-mi:prop_human(display_long)|uniprotkb:CFP(gene name)|psi-mi:CFP(display_short)|uniprotkb:PFC(gene name synonym)|uniprotkb:Complement factor P(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466174 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004228.1|ensembl:ENSG00000071539(gene)|ensembl:ENST00000166345(transcript)|go:"GO:0001556"(oocyte maturation)|go:"GO:0001673"(male germ cell nucleus)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|refseq:XP_011512465.1|dip:DIP-34493N|go:"GO:0005694"(chromosome)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0007141"(male meiosis I)|go:"GO:0007144"(female meiosis I)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007286"(spermatid development)|go:"GO:0042802"(identical protein binding)|go:"GO:0048477"(oogenesis)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001270(Chaperonin clpA/B)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR027417|interpro:IPR044539|mint:Q15645|rcsb pdb:5VQ9|rcsb pdb:5VQA|rcsb pdb:5WC2|rcsb pdb:6F0X|rcsb pdb:6LK0|rcsb pdb:7L9P|entrezgene/locuslink:9319(identity) refseq:NP_001138724.1|refseq:NP_002612.1|ensembl:ENSG00000126759(gene)|ensembl:ENST00000247153(transcript)|ensembl:ENST00000396992(transcript)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0006955"(immune response)|go:"GO:0006957"(complement activation, alternative pathway)|go:"GO:0035580"(specific granule lumen)|go:"GO:0042742"(defense response to bacterium)|go:"GO:1904724"(tertiary granule lumen)|interpro:IPR000884(Thrombospondin, type I)|interpro:IPR036383|rcsb pdb:1W0R|rcsb pdb:1W0S|rcsb pdb:6RUR|rcsb pdb:6RUS|rcsb pdb:6RUV|rcsb pdb:6RV6|rcsb pdb:6S08|rcsb pdb:6S0A|rcsb pdb:6S0B|rcsb pdb:6SEJ|reactome:R-HSA-173736|reactome:R-HSA-174577|reactome:R-HSA-5083635|reactome:R-HSA-5173214|reactome:R-HSA-6798695|reactome:R-HSA-977606|entrezgene/locuslink:5199(identity) intact:EBI-16434712(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:heF2f3R2lGIpZ80mZHnhMktXTE49606 rogid:XBExMxbnkfjvnV9zHMRZgxZWKaw9606 rigid:nwEQIo78bTwdV/Ok1tvCtDrSwDY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:A0A0S2Z3J3 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16466190 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:a0a0s2z3j3_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466199 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0005247"(voltage-gated chloride channel activity)|go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|interpro:IPR014743(Chloride channel, core)|interpro:IPR001807(Chloride channel, voltage gated)|entrezgene/locuslink:1181(identity) intact:EBI-16431121(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:jAqpY5lOQfTB1nAYqNwXBCHTVCk9606 rigid:zMOFtUSqyjld1BSIGh+lhsHWygU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:A0A0S2Z3G7 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16466215 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:a0a0s2z3g7_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466224 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0005247"(voltage-gated chloride channel activity)|go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|interpro:IPR014743(Chloride channel, core)|interpro:IPR001807(Chloride channel, voltage gated)|entrezgene/locuslink:1181(identity) intact:EBI-16431121(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:JvPbgQ8n9O7hA1kBCmeExmxyX149606 rigid:r5RWj0HuoNITJjrckpCBMzeQ14s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:A0A0S2Z368 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16466240 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:a0a0s2z368_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466243 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0005247"(voltage-gated chloride channel activity)|interpro:IPR001807(Chloride channel, voltage gated)|interpro:IPR014743(Chloride channel, core)|entrezgene/locuslink:1181(identity) intact:EBI-16431121(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:QqkkEDwGhMlbxJz7AWZzkw7EAeo9606 rigid:SuX5f8lWsI8EFWII9A9VBF+mHv4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13643 uniprotkb:A0A0S2Z3J3 intact:EBI-741101|ensembl:ENSP00000362107|uniprotkb:Q6I9T0|uniprotkb:Q9BVA2|uniprotkb:D3DPT6 intact:EBI-16466190 psi-mi:fhl3_human(display_long)|uniprotkb:FHL3(gene name)|psi-mi:FHL3(display_short)|uniprotkb:SLIM2(gene name synonym)|uniprotkb:Skeletal muscle LIM-protein 2(gene name synonym) psi-mi:a0a0s2z3j3_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004459.2|ensembl:ENSG00000183386(gene)|ensembl:ENST00000373016(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003779"(actin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005925"(focal adhesion)|go:"GO:0007517"(muscle organ development)|go:"GO:0030018"(Z disc)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q13643|rcsb pdb:1WYH|rcsb pdb:2CUQ|rcsb pdb:2EHE|interpro:IPR037987|refseq:NP_001230807.1|dip:DIP-42030N|entrezgene/locuslink:2275(identity) go:"GO:0005247"(voltage-gated chloride channel activity)|go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|interpro:IPR014743(Chloride channel, core)|interpro:IPR001807(Chloride channel, voltage gated)|entrezgene/locuslink:1181(identity) intact:EBI-16435554(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RAo+b/VgFSnHSbgR+zXuxJvypxM9606 rogid:jAqpY5lOQfTB1nAYqNwXBCHTVCk9606 rigid:aNozi6GlDkVv3kZ8Bvj+78oweoQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13643 uniprotkb:A0A0S2Z3G7 intact:EBI-741101|ensembl:ENSP00000362107|uniprotkb:Q6I9T0|uniprotkb:Q9BVA2|uniprotkb:D3DPT6 intact:EBI-16466215 psi-mi:fhl3_human(display_long)|uniprotkb:FHL3(gene name)|psi-mi:FHL3(display_short)|uniprotkb:SLIM2(gene name synonym)|uniprotkb:Skeletal muscle LIM-protein 2(gene name synonym) psi-mi:a0a0s2z3g7_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004459.2|ensembl:ENSG00000183386(gene)|ensembl:ENST00000373016(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003779"(actin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005925"(focal adhesion)|go:"GO:0007517"(muscle organ development)|go:"GO:0030018"(Z disc)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q13643|rcsb pdb:1WYH|rcsb pdb:2CUQ|rcsb pdb:2EHE|interpro:IPR037987|refseq:NP_001230807.1|dip:DIP-42030N|entrezgene/locuslink:2275(identity) go:"GO:0005247"(voltage-gated chloride channel activity)|go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|interpro:IPR014743(Chloride channel, core)|interpro:IPR001807(Chloride channel, voltage gated)|entrezgene/locuslink:1181(identity) intact:EBI-16435554(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RAo+b/VgFSnHSbgR+zXuxJvypxM9606 rogid:JvPbgQ8n9O7hA1kBCmeExmxyX149606 rigid:sJP/1W3h+/JRFhkCLG4pZgpixxY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13643 uniprotkb:A0A0S2Z368 intact:EBI-741101|ensembl:ENSP00000362107|uniprotkb:Q6I9T0|uniprotkb:Q9BVA2|uniprotkb:D3DPT6 intact:EBI-16466240 psi-mi:fhl3_human(display_long)|uniprotkb:FHL3(gene name)|psi-mi:FHL3(display_short)|uniprotkb:SLIM2(gene name synonym)|uniprotkb:Skeletal muscle LIM-protein 2(gene name synonym) psi-mi:a0a0s2z368_human(display_long)|uniprotkb:CLCN2(gene name)|psi-mi:CLCN2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466291 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004459.2|ensembl:ENSG00000183386(gene)|ensembl:ENST00000373016(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003779"(actin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005925"(focal adhesion)|go:"GO:0007517"(muscle organ development)|go:"GO:0030018"(Z disc)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q13643|rcsb pdb:1WYH|rcsb pdb:2CUQ|rcsb pdb:2EHE|interpro:IPR037987|refseq:NP_001230807.1|dip:DIP-42030N|entrezgene/locuslink:2275(identity) go:"GO:0006821"(chloride transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0005247"(voltage-gated chloride channel activity)|interpro:IPR001807(Chloride channel, voltage gated)|interpro:IPR014743(Chloride channel, core)|entrezgene/locuslink:1181(identity) intact:EBI-16435554(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RAo+b/VgFSnHSbgR+zXuxJvypxM9606 rogid:QqkkEDwGhMlbxJz7AWZzkw7EAeo9606 rigid:eb0f9JZuRlj3xh0JdqES8YczcH0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q86VP1 uniprotkb:A0A0S2Z604 intact:EBI-529518|uniprotkb:O60398|uniprotkb:O95770|uniprotkb:Q13311|uniprotkb:Q9BQG5|uniprotkb:Q9UI88|uniprotkb:B4DKU7|uniprotkb:E7ENV2|uniprotkb:A4D196|ensembl:ENSP00000379612 intact:EBI-16430119 psi-mi:taxb1_human(display_long)|uniprotkb:TRAF6-binding protein(gene name synonym)|uniprotkb:TAX1BP1(gene name)|psi-mi:TAX1BP1(display_short)|uniprotkb:T6BP(gene name synonym)|uniprotkb:PRO0105(orf name) psi-mi:a0a0s2z604_human(display_long)|uniprotkb:COG7(gene name)|psi-mi:COG7(display_short)|uniprotkb:Conserved oligomeric Golgi complex subunit 7(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466307 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001073333.1|refseq:NP_001193830.1|refseq:NP_001193831.1|refseq:NP_006015.4|dip:DIP-33010N|ensembl:ENSG00000106052(gene)|ensembl:ENST00000396319(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0019900"(kinase binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR012852(Coiled-coil transcriptional coactivator-like)|interpro:IPR041611|interpro:IPR041641|mint:Q86VP1|rcsb pdb:2M7Q|rcsb pdb:4BMJ|rcsb pdb:4NLH|rcsb pdb:4Z4K|rcsb pdb:4Z4M|rcsb pdb:5AAS|rcsb pdb:5YT6|rcsb pdb:5Z7G|reactome:R-HSA-5357905|reactome:R-HSA-936440|entrezgene/locuslink:8887(identity) go:"GO:0000139"(Golgi membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0017119"(Golgi transport complex)|interpro:IPR019335|entrezgene/locuslink:91949(identity) intact:EBI-16430385(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OJfD9nSzpjJ3bMbHugSDVJ9fj/E9606 rogid:tyBD/wDJzjaIBQVhEFlQTm1Ptec9606 rigid:rHtfEUJEohyewBXuvAuQZJgKwT8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UP83-3 uniprotkb:P83436 intact:EBI-16431689 intact:EBI-389534|uniprotkb:Q6UWU7|ensembl:ENSP00000305442 psi-mi:q9up83-3(display_long)|uniprotkb:13S Golgi transport complex 90 kDa subunit(gene name synonym)|uniprotkb:Component of oligomeric Golgi complex 5(gene name synonym)|uniprotkb:Golgi transport complex 1(gene name synonym)|uniprotkb:COG5(gene name)|psi-mi:COG5(display_short)|uniprotkb:GOLTC1(gene name synonym)|uniprotkb:GTC90(gene name synonym) psi-mi:cog7_human(display_long)|uniprotkb:UNQ3082/PRO10013(orf name)|uniprotkb:COG7(gene name)|psi-mi:COG7(display_short)|uniprotkb:Component of oligomeric Golgi complex 7(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466323 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-389502(isoform-parent)|entrezgene/locuslink:10466(identity) refseq:NP_705831.1|ensembl:ENSG00000168434(gene)|ensembl:ENST00000307149(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005730"(nucleolus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007030"(Golgi organization)|go:"GO:0017119"(Golgi transport complex)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0050821"(protein stabilization)|interpro:IPR019335|mint:P83436|reactome:R-HSA-6807878|reactome:R-HSA-6811438|reactome:R-HSA-6811440|entrezgene/locuslink:91949(identity) intact:EBI-16431696(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: COG7_1 expression is provided in figureS2C."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8d6Z5Ozyy5EOhcfo2J/n6PKdF409606 rogid:H0hZTc8M4oCkuEUCOMEMJ122BeY9606 rigid:ZefIs3myeOmkHS4UlcNP1U6MkUI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y6C2-2 uniprotkb:P83436 intact:EBI-11748557 intact:EBI-389534|uniprotkb:Q6UWU7|ensembl:ENSP00000305442 psi-mi:q9y6c2-2(display_long)|uniprotkb:EMILIN1(gene name)|psi-mi:EMILIN1(display_short)|uniprotkb:EMI(gene name synonym)|uniprotkb:Elastin microfibril interface-located protein 1(gene name synonym) psi-mi:cog7_human(display_long)|uniprotkb:UNQ3082/PRO10013(orf name)|uniprotkb:COG7(gene name)|psi-mi:COG7(display_short)|uniprotkb:Component of oligomeric Golgi complex 7(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466339 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-744586(isoform-parent)|uniprotkb:Q9Y6C2-2(isoform-parent)|entrezgene/locuslink:11117(identity) refseq:NP_705831.1|ensembl:ENSG00000168434(gene)|ensembl:ENST00000307149(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005730"(nucleolus)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007030"(Golgi organization)|go:"GO:0017119"(Golgi transport complex)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0033365"(protein localization to organelle)|go:"GO:0034067"(protein localization to Golgi apparatus)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0050821"(protein stabilization)|interpro:IPR019335|mint:P83436|reactome:R-HSA-6807878|reactome:R-HSA-6811438|reactome:R-HSA-6811440|entrezgene/locuslink:91949(identity) intact:EBI-16440082(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: COG7_1 expression is provided in figureS2C."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:NGDxonJvrK0A9caBPSPej/CS+q89606 rogid:H0hZTc8M4oCkuEUCOMEMJ122BeY9606 rigid:2FiFGR7SstOSLM4pmLXFQXubNco true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6PIL6 uniprotkb:A0A0S2Z3K0 intact:EBI-1051469|uniprotkb:Q4W5G8|uniprotkb:Q8NEU0|uniprotkb:Q9BWT2|uniprotkb:Q9H294|uniprotkb:Q9H2A4|uniprotkb:Q3YAB9|uniprotkb:Q3YAC0|uniprotkb:Q3YAB8|uniprotkb:Q3YAC1|uniprotkb:Q3YAC2|ensembl:ENSP00000371587 intact:EBI-16431143 psi-mi:kcip4_human(display_long)|uniprotkb:A-type potassium channel modulatory protein 4(gene name synonym)|uniprotkb:Potassium channel-interacting protein 4(gene name synonym)|uniprotkb:Calsenilin-like protein(gene name synonym)|uniprotkb:KCNIP4(gene name)|psi-mi:KCNIP4(display_short)|uniprotkb:CALP(gene name synonym)|uniprotkb:KCHIP4(gene name synonym) psi-mi:a0a0s2z3k0_human(display_long)|uniprotkb:COL1A2(gene name)|psi-mi:COL1A2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466355 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001030176.1|refseq:NP_079497.2|refseq:NP_671710.1|refseq:NP_671711.1|refseq:NP_671712.1|refseq:NP_001030175.1|refseq:XP_016864142.1|ensembl:ENSG00000185774(gene)|ensembl:ENST00000382152(transcript)|go:"GO:0005244"(voltage-gated ion channel activity)|go:"GO:0005267"(potassium channel activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0008076"(voltage-gated potassium channel complex)|go:"GO:0015459"(potassium channel regulator activity)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1901379"(regulation of potassium ion transmembrane transport)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR018247|interpro:IPR028846|reactome:R-HSA-5576894|entrezgene/locuslink:80333(identity) go:"GO:0005581"(collagen trimer)|interpro:IPR008160(Collagen triple helix repeat)|entrezgene/locuslink:1278(identity) intact:EBI-16429045(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ihBpvroA94ZQzV1E9Y79lF8xmqc9606 rogid:UpD+NxJv+KzbpC6BW3iMpACMxCk9606 rigid:buponVSb5wkL6KU7M6q8lrgSyrg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0 uniprotkb:Q9BT78 intact:EBI-741480|uniprotkb:Q8IXS9|uniprotkb:Q8N2Q3|uniprotkb:Q9H0T8|uniprotkb:Q9H3R4|uniprotkb:Q9HAZ5|intact:EBI-28967608|ensembl:ENSP00000365576|uniprotkb:Q5T6J5|uniprotkb:Q5T6J9|uniprotkb:A0A024R284 intact:EBI-742413|uniprotkb:Q561W7|uniprotkb:Q9NW31|uniprotkb:Q9Y677|uniprotkb:B3KN88|ensembl:ENSP00000264389|uniprotkb:B3KST5 psi-mi:ubql1_human(display_long)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym) psi-mi:csn4_human(display_long)|uniprotkb:COPS4(gene name)|psi-mi:COPS4(display_short)|uniprotkb:CSN4(gene name synonym)|uniprotkb:JAB1-containing signalosome subunit 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466371 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000257468|ensembl:ENSP00000257468|ensembl:ENSP00000365576|ensembl:ENSG00000135018(gene)|ensembl:ENST00000376395(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000502"(proteasome complex)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016235"(aggresome)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019900"(kinase binding)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035973"(aggrephagy)|go:"GO:0042802"(identical protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0097352"(autophagosome maturation)|go:"GO:1901340"(negative regulation of store-operated calcium channel activity)|go:"GO:1902175"(regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903071"(positive regulation of ER-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000626(Ubiquitin)|interpro:IPR006636(Heat shock chaperonin-binding)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR028430|interpro:IPR029071|mint:Q9UMX0|rcsb pdb:2JY5|rcsb pdb:2JY6|rcsb pdb:2KLC|reactome:R-HSA-8856825|refseq:NP_038466.2|refseq:NP_444295.1|dip:DIP-41629N|entrezgene/locuslink:29979(identity) ensembl:ENSG00000138663(gene)|refseq:NP_057213.2|refseq:NP_001244935.1|go:"GO:0016607"(nuclear speck)|go:"GO:0019784"(NEDD8-specific protease activity)|go:"GO:0030054"(cell junction)|interpro:IPR000717(Proteasome component region PCI)|interpro:IPR036388|interpro:IPR036390|interpro:IPR037754|interpro:IPR040134|interpro:IPR041406|mint:Q9BT78|rcsb pdb:4D0P|rcsb pdb:4D10|rcsb pdb:4D18|rcsb pdb:4WSN|rcsb pdb:6R6H|rcsb pdb:6R7F|rcsb pdb:6R7H|rcsb pdb:6R7I|rcsb pdb:6R7N|reactome:R-HSA-5696394|reactome:R-HSA-6781823|reactome:R-HSA-8856825|reactome:R-HSA-8951664|reactome:R-HSA-9013422|ensembl:ENST00000264389(transcript)|go:"GO:0000338"(protein deneddylation)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008180"(COP9 signalosome)|refseq:NP_001317656.1|dip:DIP-34516N|entrezgene/locuslink:51138(identity) intact:EBI-16432802(see-also) - - comment:"Evidence for isoform CCSB isoform ID: COPS4_1 expression is provided in figureS2E."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nCFfZbGCTvRYaXhQ4R99XblslvM9606 rogid:onrZiPzG+bZvycmpDTZMtkPzCfQ9606 rigid:gp4ZN8AgYJUbI9P1dU8sCsbJIyk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P08727 intact:EBI-16432800 intact:EBI-742756|uniprotkb:Q5XG83|uniprotkb:Q6NW33|uniprotkb:Q7L5M9|uniprotkb:Q96A53|uniprotkb:Q96FV1|uniprotkb:Q9BYF9|uniprotkb:Q9P1Y4|uniprotkb:B2R874|ensembl:ENSP00000355124 - psi-mi:k1c19_human(display_long)|uniprotkb:Cytokeratin-19(gene name synonym)|uniprotkb:Keratin-19(gene name synonym)|uniprotkb:KRT19(gene name)|psi-mi:KRT19(display_short) psi-mi:"ccsb isoform id: cops4_2"(display_short)|psi-mi:EBI-16432800(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466387 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002267.2|ensembl:ENSG00000171345(gene)|ensembl:ENST00000361566(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0008307"(structural constituent of muscle)|go:"GO:0016010"(dystrophin-associated glycoprotein complex)|go:"GO:0016327"(apicolateral plasma membrane)|go:"GO:0030018"(Z disc)|go:"GO:0042383"(sarcolemma)|go:"GO:0043034"(costamere)|go:"GO:0043627"(response to estrogen)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045214"(sarcomere organization)|go:"GO:0060706"(cell differentiation involved in embryonic placenta development)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071944"(cell periphery)|go:"GO:1990357"(terminal web)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|mint:P08727|reactome:R-HSA-6805567|reactome:R-HSA-6809371|dip:DIP-35655N|entrezgene/locuslink:3880(identity) entrezgene/locuslink:51138(identity) intact:EBI-16435370(see-also) - - comment:"Evidence for isoform CCSB isoform ID: COPS4_2 expression is provided in figureS2E."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fqsG2nghpcmTtI39LiYVLNYuFIA9606 rogid:vPY3rKRE6kWXbUK0bKK5SHSR+409606 rigid:jtm1QzO9sbkRG7UJfsr+SFXT/V4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 intact:EBI-16432800 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 - psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:"ccsb isoform id: cops4_2"(display_short)|psi-mi:EBI-16432800(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466403 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) entrezgene/locuslink:51138(identity) intact:EBI-16439799(see-also) - - comment:"Evidence for isoform CCSB isoform ID: COPS4_2 expression is provided in figureS2E."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:vPY3rKRE6kWXbUK0bKK5SHSR+409606 rigid:3fBg86Cj6SDpnsGSMo74R8yL5W8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND30 uniprotkb:P46108 intact:EBI-744056|uniprotkb:O75337|uniprotkb:Q8WW26|intact:EBI-28975311|uniprotkb:B7Z433|uniprotkb:E9PK77|ensembl:ENSP00000299492 intact:EBI-886|uniprotkb:B0LPE8|uniprotkb:Q96HJ0|uniprotkb:A8MWE8|uniprotkb:Q96GA9|uniprotkb:D3DTH6|intact:EBI-28974221|ensembl:ENSP00000300574|intact:EBI-16429791 psi-mi:lipb2_human(display_long)|uniprotkb:Protein tyrosine phosphatase receptor type f polypeptide-interacting protein-binding protein 2(gene name synonym)|uniprotkb:PPFIBP2(gene name)|psi-mi:PPFIBP2(display_short) psi-mi:crk_human(display_long)|uniprotkb:Proto-oncogene c-Crk(gene name synonym)|uniprotkb:CRK(gene name)|psi-mi:CRK(display_short)|uniprotkb:p38(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466419 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003612.2|ensembl:ENSP00000299492|ensembl:ENST00000528883|ensembl:ENSP00000435469|ensembl:ENST00000530181|ensembl:ENSP00000437321|refseq:NP_001243497.1|refseq:XP_016873932.1|dip:DIP-42373N|ensembl:ENSG00000166387(gene)|ensembl:ENST00000299492(transcript)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0007528"(neuromuscular junction development)|go:"GO:0042802"(identical protein binding)|go:"GO:0048786"(presynaptic active zone)|go:"GO:0050808"(synapse organization)|interpro:IPR001660(Sterile alpha motif SAM)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR029515|interpro:IPR030435|interpro:IPR037617|interpro:IPR037618|interpro:IPR037619|mint:Q8ND30|rcsb pdb:3QH9|reactome:R-HSA-388844|entrezgene/locuslink:8495(identity) ensembl:ENSP00000300574|ensembl:ENST00000398970|ensembl:ENSP00000381942|refseq:NP_005197.3|refseq:NP_058431.2|ensembl:ENSG00000167193(gene)|ensembl:ENST00000300574(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0001878"(response to yeast)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0008360"(regulation of cell shape)|dip:DIP-199N|go:"GO:0009966"(regulation of signal transduction)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016358"(dendrite development)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019900"(kinase binding)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033628"(regulation of cell adhesion mediated by integrin)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0035685"(helper T cell diapedesis)|go:"GO:0035728"(response to hepatocyte growth factor)|go:"GO:0038026"(reelin-mediated signaling pathway)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0045121"(membrane raft)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045953"(negative regulation of natural killer cell mediated cytotoxicity)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0060326"(cell chemotaxis)|go:"GO:0061045"(negative regulation of wound healing)|go:"GO:0061847"(response to cholecystokinin)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0098749"(cerebellar neuron development)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1902531"(regulation of intracellular signal transduction)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990314"(cellular response to insulin-like growth factor stimulus)|go:"GO:1990782"(protein tyrosine kinase binding)|go:"GO:1990859"(cellular response to endothelin)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000404"(regulation of T cell migration)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR035457|interpro:IPR035458|interpro:IPR036028|interpro:IPR036860|mint:P46108|rcsb pdb:1JU5|rcsb pdb:2DVJ|rcsb pdb:2EYV|rcsb pdb:2EYW|rcsb pdb:2EYX|rcsb pdb:2EYY|rcsb pdb:2EYZ|rcsb pdb:2MS4|rcsb pdb:5UL6|rcsb pdb:6ATV|reactome:R-HSA-170984|reactome:R-HSA-186763|reactome:R-HSA-2029482|reactome:R-HSA-372708|reactome:R-HSA-4420097|reactome:R-HSA-8849471|reactome:R-HSA-8875555|reactome:R-HSA-8875656|reactome:R-HSA-912631|reactome:R-HSA-9664422|entrezgene/locuslink:1398(identity) intact:EBI-16431778(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:36bMLWHJuGN5eItyc1HvhoLonZA9606 rogid:lIXCzFxFvmvsfPaLQIKV9QS75cw9606 rigid:TVu3IYjzNPduuCgZ4M09VNAei9M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P41970 uniprotkb:P46108 intact:EBI-1758534|uniprotkb:Q6FG57|uniprotkb:Q6GU29|uniprotkb:Q9UD17|uniprotkb:B2R6S6|ensembl:ENSP00000228741 intact:EBI-886|uniprotkb:B0LPE8|uniprotkb:Q96HJ0|uniprotkb:A8MWE8|uniprotkb:Q96GA9|uniprotkb:D3DTH6|intact:EBI-28974221|ensembl:ENSP00000300574|intact:EBI-16429791 psi-mi:elk3_human(display_long)|uniprotkb:ELK3(gene name)|psi-mi:ELK3(display_short)|uniprotkb:NET(gene name synonym)|uniprotkb:SAP2(gene name synonym)|uniprotkb:ETS-related protein NET(gene name synonym)|uniprotkb:ETS-related protein ERP(gene name synonym)|uniprotkb:Serum response factor accessory protein 2(gene name synonym) psi-mi:crk_human(display_long)|uniprotkb:Proto-oncogene c-Crk(gene name synonym)|uniprotkb:CRK(gene name)|psi-mi:CRK(display_short)|uniprotkb:p38(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466435 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005221.2|refseq:XP_006719338.1|ensembl:ENSG00000111145(gene)|ensembl:ENST00000228741(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001525"(angiogenesis)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007165"(signal transduction)|go:"GO:0030154"(cell differentiation)|go:"GO:0032422"(purine-rich negative regulatory element binding)|go:"GO:0042060"(wound healing)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000418(Ets)|interpro:IPR036388|interpro:IPR036390|entrezgene/locuslink:2004(identity) ensembl:ENSP00000300574|ensembl:ENST00000398970|ensembl:ENSP00000381942|refseq:NP_005197.3|refseq:NP_058431.2|ensembl:ENSG00000167193(gene)|ensembl:ENST00000300574(transcript)|go:"GO:0001764"(neuron migration)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0001878"(response to yeast)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006629"(lipid metabolic process)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0008360"(regulation of cell shape)|dip:DIP-199N|go:"GO:0009966"(regulation of signal transduction)|go:"GO:0014911"(positive regulation of smooth muscle cell migration)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016358"(dendrite development)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019900"(kinase binding)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0030159"(signaling receptor complex adaptor activity)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033628"(regulation of cell adhesion mediated by integrin)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0035685"(helper T cell diapedesis)|go:"GO:0035728"(response to hepatocyte growth factor)|go:"GO:0038026"(reelin-mediated signaling pathway)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0042542"(response to hydrogen peroxide)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0043621"(protein self-association)|go:"GO:0045121"(membrane raft)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045953"(negative regulation of natural killer cell mediated cytotoxicity)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0050773"(regulation of dendrite development)|go:"GO:0060326"(cell chemotaxis)|go:"GO:0061045"(negative regulation of wound healing)|go:"GO:0061847"(response to cholecystokinin)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0090630"(activation of GTPase activity)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0098749"(cerebellar neuron development)|go:"GO:1900026"(positive regulation of substrate adhesion-dependent cell spreading)|go:"GO:1902531"(regulation of intracellular signal transduction)|go:"GO:1990090"(cellular response to nerve growth factor stimulus)|go:"GO:1990314"(cellular response to insulin-like growth factor stimulus)|go:"GO:1990782"(protein tyrosine kinase binding)|go:"GO:1990859"(cellular response to endothelin)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000404"(regulation of T cell migration)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR035457|interpro:IPR035458|interpro:IPR036028|interpro:IPR036860|mint:P46108|rcsb pdb:1JU5|rcsb pdb:2DVJ|rcsb pdb:2EYV|rcsb pdb:2EYW|rcsb pdb:2EYX|rcsb pdb:2EYY|rcsb pdb:2EYZ|rcsb pdb:2MS4|rcsb pdb:5UL6|rcsb pdb:6ATV|reactome:R-HSA-170984|reactome:R-HSA-186763|reactome:R-HSA-2029482|reactome:R-HSA-372708|reactome:R-HSA-4420097|reactome:R-HSA-8849471|reactome:R-HSA-8875555|reactome:R-HSA-8875656|reactome:R-HSA-912631|reactome:R-HSA-9664422|entrezgene/locuslink:1398(identity) intact:EBI-16437677(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:iPkf41e5YQWRa3P5QiEz/npvNgM9606 rogid:lIXCzFxFvmvsfPaLQIKV9QS75cw9606 rigid:5RSOtc25JPI6hFuIsiWZKbOMW5M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N205-2 intact:EBI-16466451 intact:EBI-12099160|ensembl:ENSP00000343152 - psi-mi:q8n205-2(display_long)|uniprotkb:SYNE4(gene name)|psi-mi:SYNE4(display_short)|uniprotkb:C19orf46(gene name synonym)|uniprotkb:Nuclear envelope spectrin repeat protein 4(gene name synonym)|uniprotkb:KASH domain-containing protein 4(gene name synonym) psi-mi:"ccsb isoform id: csgalnact2_3"(display_short)|psi-mi:EBI-16466451(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466454 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000181392(gene)|ensembl:ENST00000340477(transcript)|intact:EBI-7131783(isoform-parent)|uniprotkb:Q8N205-2(isoform-parent)|entrezgene/locuslink:163183(identity) entrezgene/locuslink:55454(identity) intact:EBI-16434758(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:wZZnrCoICL0cSTPDAK5tBR6uoAk9606 rogid:mpixmCTfLzsS2yiPVxjCibJKsm49606 rigid:nO/VzYfiAqvnynKwjVEV4mqF5H8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969F0 uniprotkb:P49682 intact:EBI-743099|ensembl:ENSP00000359375 intact:EBI-12836456|ensembl:ENSP00000362797|uniprotkb:B2R982|uniprotkb:O15185|uniprotkb:Q7Z710|uniprotkb:Q9P2T4|uniprotkb:Q9P2T5 psi-mi:fate1_human(display_long)|uniprotkb:Tumor antigen BJ-HCC-2(gene name synonym)|uniprotkb:Cancer/testis antigen 43(gene name synonym)|uniprotkb:FATE1(gene name)|psi-mi:FATE1(display_short)|uniprotkb:FATE(gene name synonym) psi-mi:cxcr3_human(display_long)|uniprotkb:CXCR3(gene name)|psi-mi:CXCR3(display_short)|uniprotkb:CKR-L2(gene name synonym)|uniprotkb:G protein-coupled receptor 9(gene name synonym)|uniprotkb:GPR9(gene name synonym)|uniprotkb:Interferon-inducible protein 10 receptor(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466470 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149076.1|ensembl:ENSG00000147378(gene)|ensembl:ENST00000370350(transcript)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0051562"(negative regulation of mitochondrial calcium ion concentration)|interpro:IPR039153|interpro:IPR039433|mint:Q969F0|entrezgene/locuslink:89885(identity) go:"GO:0038023"(signaling receptor activity)|go:"GO:0045766"(positive regulation of angiogenesis)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050921"(positive regulation of chemotaxis)|go:"GO:0051281"(positive regulation of release of sequestered calcium ion into cytosol)|go:"GO:0060326"(cell chemotaxis)|go:"GO:1900118"(negative regulation of execution phase of apoptosis)|go:"GO:1900119"(positive regulation of execution phase of apoptosis)|interpro:IPR000276(GPCR, rhodopsin-like)|interpro:IPR000355(Chemokine receptor)|interpro:IPR004070(C-X-C chemokine receptor, type 3)|interpro:IPR017452(GPCR, rhodopsin-like superfamily)|reactome:R-HSA-380108|reactome:R-HSA-418594|go:"GO:0030155"(regulation of cell adhesion)|ensembl:ENSG00000186810(gene)|ensembl:ENST00000373693(transcript)|go:"GO:0001525"(angiogenesis)|go:"GO:0001937"(negative regulation of endothelial cell proliferation)|go:"GO:0002685"(regulation of leukocyte migration)|go:"GO:0004950"(chemokine receptor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0006935"(chemotaxis)|go:"GO:0006954"(inflammatory response)|go:"GO:0006955"(immune response)|go:"GO:0007155"(cell adhesion)|go:"GO:0007166"(cell surface receptor signaling pathway)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0007189"(adenylate cyclase-activating G protein-coupled receptor signaling pathway)|go:"GO:0007204"(positive regulation of cytosolic calcium ion concentration)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0010818"(T cell chemotaxis)|go:"GO:0016493"(C-C chemokine receptor activity)|go:"GO:0016494"(C-X-C chemokine receptor activity)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019722"(calcium-mediated signaling)|go:"GO:0019956"(chemokine binding)|go:"GO:0019957"(C-C chemokine binding)|go:"GO:0019958"(C-X-C chemokine binding)|refseq:NP_001136269.1|refseq:NP_001495.1|refseq:XP_016884924.1|dip:DIP-5891N|entrezgene/locuslink:2833(identity) intact:EBI-16432546(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nm1N6lO92MHr5rIKC007oouF5RE9606 rogid:P9WxnLkV6IH50a6feWDd6KsoNlA9606 rigid:I7HJgWKXtRx54VBh8CdtdsrF+3U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NP66 uniprotkb:Q9UJW0 intact:EBI-740641|ensembl:ENSP00000336856|ensembl:ENSP00000371133|uniprotkb:A6NHY3|uniprotkb:Q53G31|uniprotkb:Q9NSF6|uniprotkb:D3DW78 intact:EBI-2134033|uniprotkb:Q8TAN8|uniprotkb:D3DQH0|intact:EBI-2559420|uniprotkb:B3KWW0|uniprotkb:E5RGT5|ensembl:ENSP00000416968 psi-mi:hm20a_human(display_long)|uniprotkb:HMG box-containing protein 20A(gene name synonym)|uniprotkb:HMG domain-containing protein HMGX1(gene name synonym)|uniprotkb:HMG20A(gene name)|psi-mi:HMG20A(display_short)|uniprotkb:HMGX1(gene name synonym)|uniprotkb:HMGXB1(gene name synonym)|uniprotkb:HMG domain-containing protein 1(gene name synonym) psi-mi:dctn4_human(display_long)|uniprotkb:DCTN4(gene name)|psi-mi:DCTN4(display_short)|uniprotkb:Dynactin subunit p62(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466486 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060670.1|ensembl:ENSG00000140382(gene)|ensembl:ENST00000336216(transcript)|ensembl:ENST00000381714(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0033234"(negative regulation of protein sumoylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0045665"(negative regulation of neuron differentiation)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR036910|mint:Q9NP66|refseq:NP_001291433.1|refseq:NP_001291434.1|refseq:XP_011519460.1|entrezgene/locuslink:10363(identity) refseq:XP_011535946.1|refseq:XP_011535947.1|refseq:NP_001129116.1|refseq:NP_057305.1|refseq:NP_001129115.1|ensembl:ENSG00000132912(gene)|ensembl:ENST00000447998(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0000922"(spindle pole)|go:"GO:0001725"(stress fiber)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005868"(cytoplasmic dynein complex)|go:"GO:0005869"(dynactin complex)|go:"GO:0005925"(focal adhesion)|go:"GO:0005938"(cell cortex)|go:"GO:0030017"(sarcomere)|go:"GO:0047485"(protein N-terminus binding)|interpro:IPR008603(Dynactin p62)|mint:Q9UJW0|reactome:R-HSA-2132295|reactome:R-HSA-3371497|reactome:R-HSA-6807878|reactome:R-HSA-6811436|entrezgene/locuslink:51164(identity) intact:EBI-16432592(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:LhilayeP+xv97pbYzIA8yMvwUbc9606 rogid:JradQZl06O4u9N3HH+cpvdP05RA9606 rigid:7x1gb+ZU+yl4EAh4l2qfaD0WCGY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NP66 uniprotkb:A0A0S2Z5B8 intact:EBI-740641|ensembl:ENSP00000336856|ensembl:ENSP00000371133|uniprotkb:A6NHY3|uniprotkb:Q53G31|uniprotkb:Q9NSF6|uniprotkb:D3DW78 intact:EBI-16466502 psi-mi:hm20a_human(display_long)|uniprotkb:HMG box-containing protein 20A(gene name synonym)|uniprotkb:HMG domain-containing protein HMGX1(gene name synonym)|uniprotkb:HMG20A(gene name)|psi-mi:HMG20A(display_short)|uniprotkb:HMGX1(gene name synonym)|uniprotkb:HMGXB1(gene name synonym)|uniprotkb:HMG domain-containing protein 1(gene name synonym) psi-mi:a0a0s2z5b8_human(display_long)|uniprotkb:DCTN4(gene name)|psi-mi:DCTN4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466509 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060670.1|ensembl:ENSG00000140382(gene)|ensembl:ENST00000336216(transcript)|ensembl:ENST00000381714(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0033234"(negative regulation of protein sumoylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0045665"(negative regulation of neuron differentiation)|interpro:IPR009071(High mobility group box, HMG)|interpro:IPR036910|mint:Q9NP66|refseq:NP_001291433.1|refseq:NP_001291434.1|refseq:XP_011519460.1|entrezgene/locuslink:10363(identity) go:"GO:0005869"(dynactin complex)|interpro:IPR008603(Dynactin p62)|entrezgene/locuslink:51164(identity) intact:EBI-16432592(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:LhilayeP+xv97pbYzIA8yMvwUbc9606 rogid:YbENGRFyl7aDyzeVH/us/i2mScQ9606 rigid:FuE4sN6NCBNquN9rycqCGPkrRxc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z5D5 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16432590 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z5d5_human(display_long)|uniprotkb:DCTN4(gene name)|psi-mi:DCTN4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466544 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) entrezgene/locuslink:51164(identity) intact:EBI-16438444(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:c2CExeSJVtEGU1+sUEgWSSI9ZVc9606 rigid:8u1xxfKbuhbcco/xawYSDjLxrLY true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z5B8 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16466502 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z5b8_human(display_long)|uniprotkb:DCTN4(gene name)|psi-mi:DCTN4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466525 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0005869"(dynactin complex)|interpro:IPR008603(Dynactin p62)|entrezgene/locuslink:51164(identity) intact:EBI-16438444(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:YbENGRFyl7aDyzeVH/us/i2mScQ9606 rigid:lw5Jf/tco3aHGm5BOEvdaasSHvQ true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00471 uniprotkb:Q8WXU2-2 intact:EBI-949824|ensembl:ENSP00000484855|uniprotkb:B2R6C5|intact:EBI-10171392|uniprotkb:Q8IW24 intact:EBI-9381887|ensembl:ENSP00000403412 psi-mi:exoc5_human(display_long)|uniprotkb:Exocyst complex component Sec10(gene name synonym)|uniprotkb:EXOC5(gene name)|psi-mi:EXOC5(display_short)|uniprotkb:SEC10(gene name synonym)|uniprotkb:SEC10L1(gene name synonym) psi-mi:q8wxu2-2(display_long)|uniprotkb:DNAAF4(gene name)|psi-mi:DNAAF4(display_short)|uniprotkb:DYX1C1(gene name synonym)|uniprotkb:Dyslexia susceptibility 1 candidate gene 1 protein(gene name synonym)|uniprotkb:EKN1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466713 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000070367(gene)|ensembl:ENST00000621441(transcript)|go:"GO:0000145"(exocyst)|go:"GO:0001736"(establishment of planar polarity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006887"(exocytosis)|go:"GO:0006892"(post-Golgi vesicle-mediated transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0015031"(protein transport)|go:"GO:0030496"(midbody)|go:"GO:0031267"(small GTPase binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1904019"(epithelial cell apoptotic process)|go:"GO:1905515"(non-motile cilium assembly)|interpro:IPR009976(Exocyst complex component Sec10)|interpro:IPR033960|mint:O00471|reactome:R-HSA-1445148|reactome:R-HSA-264876|reactome:R-HSA-5620916|refseq:NP_006535.1|entrezgene/locuslink:10640(identity) ensembl:ENSG00000256061(gene)|ensembl:ENST00000448430(transcript)|uniprotkb:Q8WXU2-2(isoform-parent)|intact:EBI-2946907(isoform-parent)|entrezgene/locuslink:161582(identity) intact:EBI-16430219(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UaEk0DAH+boE9+hl8z3VUUI78dM9606 rogid:jYtZBqy6D77KSvFPNp8nBddDD1s9606 rigid:/L3X/1o/laqq0ILl5IqndU7Dpx0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UPQ8 uniprotkb:Q9UMX0-2 intact:EBI-8645574|ensembl:ENSP00000361667|uniprotkb:Q5SRE6|intact:MINT-4724096|intact:MINT-8163513 intact:EBI-10173939|ensembl:ENSP00000257468 psi-mi:dolk_human(display_long)|uniprotkb:KIAA1094(gene name synonym)|uniprotkb:UNQ2422/PRO4980(orf name)|uniprotkb:DOLK(gene name)|psi-mi:DOLK(display_short)|uniprotkb:TMEM15(gene name synonym)|uniprotkb:Transmembrane protein 15(gene name synonym) psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466662 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000175283(gene)|ensembl:ENST00000372586(transcript)|go:"GO:0004168"(dolichol kinase activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006489"(dolichyl diphosphate biosynthetic process)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0043048"(dolichyl monophosphate biosynthetic process)|interpro:IPR026566|interpro:IPR032974|reactome:R-HSA-446199|reactome:R-HSA-4755583|refseq:NP_055723.1|entrezgene/locuslink:22845(identity) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) intact:EBI-16431167(see-also) function:"Defects in TMEM15 are the cause of congenital disorder of glycosylation type 1M (CDG1M) [MIM:610768]; also known as dolichol kinase deficiency. CDGs are a family of severe inherited diseases caused by a defect in glycoprotein biosynthesis. They are characterized by under-glycosylated serum glycoproteins. These multisystem disorders present with a wide variety of clinical features, such as disorders of the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG1M is a very severe disorder with death occurring in early infancy" isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:oVMRd2DWTKCgO7cySF3k2IbBfn09606 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rigid:Q4a0WtyOeUoewKJV4Poln8Y6ELo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P22001 uniprotkb:A0A0S2Z5Y1 intact:EBI-8627664|ensembl:ENSP00000358784|intact:MINT-1528422|uniprotkb:Q5VWN2 intact:EBI-16431159 psi-mi:kcna3_human(display_long)|uniprotkb:KCNA3(gene name)|psi-mi:KCNA3(display_short)|uniprotkb:HGK5(gene name synonym)|uniprotkb:HPCN3(gene name synonym)|uniprotkb:HLK3(gene name synonym)|uniprotkb:"Voltage-gated K(+) channel HuKIII"(gene name synonym)|uniprotkb:Voltage-gated potassium channel subunit Kv1.3(gene name synonym) psi-mi:a0a0s2z5y1_human(display_long)|uniprotkb:DOLK(gene name)|psi-mi:DOLK(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466694 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR000210(BTB/POZ-like)|interpro:IPR003131(Potassium channel, voltage dependent, Kv, tetramerisation)|interpro:IPR003968(Potassium channel, voltage dependent, Kv)|interpro:IPR003972(Potassium channel, voltage dependent, Kv1)|interpro:IPR004050(Potassium channel, voltage dependent, Kv1.3)|interpro:IPR005821(Ion transport)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR027359|interpro:IPR028325|rcsb pdb:4BGC|rcsb pdb:7EJ1|rcsb pdb:7EJ2|reactome:R-HSA-1296072|go:"GO:0099056"(integral component of presynaptic membrane)|ensembl:ENST00000369769(transcript)|go:"GO:0005244"(voltage-gated ion channel activity)|go:"GO:0005249"(voltage-gated potassium channel activity)|go:"GO:0005251"(delayed rectifier potassium channel activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006813"(potassium ion transport)|go:"GO:0008076"(voltage-gated potassium channel complex)|go:"GO:0015271"(outward rectifier potassium channel activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030424"(axon)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0044305"(calyx of Held)|go:"GO:0045121"(membrane raft)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0071805"(potassium ion transmembrane transport)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099055"(integral component of postsynaptic membrane)|ensembl:ENSG00000177272(gene)|refseq:NP_002223.3|dip:DIP-44822N|entrezgene/locuslink:3738(identity) go:"GO:0016301"(kinase activity)|interpro:IPR032974|entrezgene/locuslink:22845(identity) intact:EBI-16432872(see-also) comment:mint|function:Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:QH0tUFo3Db+XWLTawQfDhma+3jg9606 rogid:/tQYfLrD7OKrWUFrog22eoJZWhA9606 rigid:bEFS9bMvKsyzh27AZCo0Odr8o70 true sufficient binding region:53-575 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IZU0 uniprotkb:Q16854 intact:EBI-10175124|uniprotkb:Q8N7Z8|uniprotkb:Q0IJ68|ensembl:ENSP00000318716|ensembl:ENSP00000412606|ensembl:ENSP00000431456|ensembl:ENSP00000498495 intact:EBI-3908194|uniprotkb:P78532|uniprotkb:Q16759|uniprotkb:Q4ZG09|uniprotkb:Q96BC1|uniprotkb:Q7L1W9|intact:EBI-16466603|ensembl:ENSP00000264093 psi-mi:fam9b_human(display_long)|uniprotkb:FAM9B(gene name)|psi-mi:FAM9B(display_short) psi-mi:dguok_human(display_long)|uniprotkb:DGUOK(gene name)|psi-mi:DGUOK(display_short)|uniprotkb:DGK(gene name synonym)|uniprotkb:Deoxyadenosine kinase, mitochondrial(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466606 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_995321.1|refseq:XP_011543766.1|ensembl:ENSG00000177138(gene)|ensembl:ENST00000327220(transcript)|ensembl:ENST00000428477(transcript)|ensembl:ENST00000472522(transcript)|ensembl:ENST00000651278(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR006888(Cor1/Xlr/Xmr conserved region)|entrezgene/locuslink:171483(identity) refseq:NP_550438.1|refseq:NP_550440.1|refseq:NP_001305788.1|refseq:NP_001305789.1|refseq:NP_001305790.1|refseq:NP_001305791.1|refseq:NP_001305792.1|ensembl:ENSG00000114956(gene)|ensembl:ENST00000264093(transcript)|go:"GO:0004136"(deoxyadenosine kinase activity)|go:"GO:0004138"(deoxyguanosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0008617"(guanosine metabolic process)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0019136"(deoxynucleoside kinase activity)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046070"(dGTP metabolic process)|go:"GO:0046122"(purine deoxyribonucleoside metabolic process)|interpro:IPR002624(Deoxynucleoside kinase)|interpro:IPR027417|interpro:IPR031314|rcsb pdb:2OCP|reactome:R-HSA-74217|entrezgene/locuslink:1716(identity) intact:EBI-16436769(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:tEJbrpO7KWcw7izp1VJ+5q6Xces9606 rogid:WTctzYSxFE3aQ1L7s9fNMkw8nII9606 rigid:k3zOQaqmy0R6gUTqoer73JMX4mY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:Q9NR28-3 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-16466622|ensembl:ENSP00000320343 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:q9nr28-3(display_long)|uniprotkb:Direct IAP-binding protein with low pI(gene name synonym)|uniprotkb:Second mitochondria-derived activator of caspase(gene name synonym)|uniprotkb:SMAC3(isoform synonym)|uniprotkb:DIABLO(gene name)|psi-mi:DIABLO(display_short)|uniprotkb:SMAC(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466646 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) intact:EBI-517508(isoform-parent)|ensembl:ENST00000353548(transcript)|ensembl:ENSG00000184047(gene)|entrezgene/locuslink:56616(identity) intact:EBI-16439070(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:MofZ1Z5vpCxl/pplvbGJlHn9oqQ9606 rigid:QdU3tL6Iyt/N7bEgCfKgh7Jardk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15041 uniprotkb:Q9NR28-3 intact:EBI-714543|ensembl:ENSP00000306788|uniprotkb:B7Z6S5|uniprotkb:B7Z791|uniprotkb:F5GXP4 intact:EBI-16466622|ensembl:ENSP00000320343 psi-mi:ar6p1_human(display_long)|uniprotkb:ARL6IP(gene name synonym)|uniprotkb:ARL6IP1(gene name)|psi-mi:ARL6IP1(display_short)|uniprotkb:KIAA0069(gene name synonym)|uniprotkb:ARMER(gene name synonym)|uniprotkb:Apoptotic regulator in the membrane of the endoplasmic reticulum(gene name synonym) psi-mi:q9nr28-3(display_long)|uniprotkb:Direct IAP-binding protein with low pI(gene name synonym)|uniprotkb:Second mitochondria-derived activator of caspase(gene name synonym)|uniprotkb:SMAC3(isoform synonym)|uniprotkb:DIABLO(gene name)|psi-mi:DIABLO(display_short)|uniprotkb:SMAC(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466630 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055976.1|ensembl:ENSG00000170540(gene)|ensembl:ENST00000304414(transcript)|go:"GO:0005784"(Sec61 translocon complex)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006613"(cotranslational protein targeting to membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0071787"(endoplasmic reticulum tubular network formation)|go:"GO:1903371"(regulation of endoplasmic reticulum tubular network organization)|go:"GO:1990809"(endoplasmic reticulum tubular network membrane organization)|interpro:IPR033301|mint:Q15041|go:"GO:0002038"(positive regulation of L-glutamate import across plasma membrane)|refseq:NP_001300787.1|entrezgene/locuslink:23204(identity) intact:EBI-517508(isoform-parent)|ensembl:ENST00000353548(transcript)|ensembl:ENSG00000184047(gene)|entrezgene/locuslink:56616(identity) intact:EBI-16432884(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3fjkoyvUx25po7xsPcXgpjEeLJg9606 rogid:MofZ1Z5vpCxl/pplvbGJlHn9oqQ9606 rigid:dANcD71avPgXLRaiAk7eR7+oomQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IZU0 uniprotkb:Q16854 intact:EBI-10175124|uniprotkb:Q8N7Z8|uniprotkb:Q0IJ68|ensembl:ENSP00000318716|ensembl:ENSP00000412606|ensembl:ENSP00000431456|ensembl:ENSP00000498495 intact:EBI-3908194|uniprotkb:P78532|uniprotkb:Q16759|uniprotkb:Q4ZG09|uniprotkb:Q96BC1|uniprotkb:Q7L1W9|intact:EBI-16466603|ensembl:ENSP00000264093 psi-mi:fam9b_human(display_long)|uniprotkb:FAM9B(gene name)|psi-mi:FAM9B(display_short) psi-mi:dguok_human(display_long)|uniprotkb:DGUOK(gene name)|psi-mi:DGUOK(display_short)|uniprotkb:DGK(gene name synonym)|uniprotkb:Deoxyadenosine kinase, mitochondrial(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466587 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_995321.1|refseq:XP_011543766.1|ensembl:ENSG00000177138(gene)|ensembl:ENST00000327220(transcript)|ensembl:ENST00000428477(transcript)|ensembl:ENST00000472522(transcript)|ensembl:ENST00000651278(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR006888(Cor1/Xlr/Xmr conserved region)|entrezgene/locuslink:171483(identity) refseq:NP_550438.1|refseq:NP_550440.1|refseq:NP_001305788.1|refseq:NP_001305789.1|refseq:NP_001305790.1|refseq:NP_001305791.1|refseq:NP_001305792.1|ensembl:ENSG00000114956(gene)|ensembl:ENST00000264093(transcript)|go:"GO:0004136"(deoxyadenosine kinase activity)|go:"GO:0004138"(deoxyguanosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006754"(ATP biosynthetic process)|go:"GO:0008617"(guanosine metabolic process)|go:"GO:0010977"(negative regulation of neuron projection development)|go:"GO:0019136"(deoxynucleoside kinase activity)|go:"GO:0042775"(mitochondrial ATP synthesis coupled electron transport)|go:"GO:0046070"(dGTP metabolic process)|go:"GO:0046122"(purine deoxyribonucleoside metabolic process)|interpro:IPR002624(Deoxynucleoside kinase)|interpro:IPR027417|interpro:IPR031314|rcsb pdb:2OCP|reactome:R-HSA-74217|entrezgene/locuslink:1716(identity) intact:EBI-16436769(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tEJbrpO7KWcw7izp1VJ+5q6Xces9606 rogid:WTctzYSxFE3aQ1L7s9fNMkw8nII9606 rigid:k3zOQaqmy0R6gUTqoer73JMX4mY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UPQ8 uniprotkb:Q9UMX0 intact:EBI-8645574|ensembl:ENSP00000361667|uniprotkb:Q5SRE6|intact:MINT-4724096|intact:MINT-8163513 intact:EBI-741480|uniprotkb:Q8IXS9|uniprotkb:Q8N2Q3|uniprotkb:Q9H0T8|uniprotkb:Q9H3R4|uniprotkb:Q9HAZ5|intact:EBI-28967608|ensembl:ENSP00000365576|uniprotkb:Q5T6J5|uniprotkb:Q5T6J9|uniprotkb:A0A024R284 psi-mi:dolk_human(display_long)|uniprotkb:KIAA1094(gene name synonym)|uniprotkb:UNQ2422/PRO4980(orf name)|uniprotkb:DOLK(gene name)|psi-mi:DOLK(display_short)|uniprotkb:TMEM15(gene name synonym)|uniprotkb:Transmembrane protein 15(gene name synonym) psi-mi:ubql1_human(display_long)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466678 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000175283(gene)|ensembl:ENST00000372586(transcript)|go:"GO:0004168"(dolichol kinase activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006489"(dolichyl diphosphate biosynthetic process)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0043048"(dolichyl monophosphate biosynthetic process)|interpro:IPR026566|interpro:IPR032974|reactome:R-HSA-446199|reactome:R-HSA-4755583|refseq:NP_055723.1|entrezgene/locuslink:22845(identity) ensembl:ENST00000257468|ensembl:ENSP00000257468|ensembl:ENSP00000365576|ensembl:ENSG00000135018(gene)|ensembl:ENST00000376395(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000502"(proteasome complex)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016235"(aggresome)|go:"GO:0016236"(macroautophagy)|go:"GO:0016241"(regulation of macroautophagy)|go:"GO:0019900"(kinase binding)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035973"(aggrephagy)|go:"GO:0042802"(identical protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0097352"(autophagosome maturation)|go:"GO:1901340"(negative regulation of store-operated calcium channel activity)|go:"GO:1902175"(regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903071"(positive regulation of ER-associated ubiquitin-dependent protein catabolic process)|interpro:IPR000626(Ubiquitin)|interpro:IPR006636(Heat shock chaperonin-binding)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR028430|interpro:IPR029071|mint:Q9UMX0|rcsb pdb:2JY5|rcsb pdb:2JY6|rcsb pdb:2KLC|reactome:R-HSA-8856825|refseq:NP_038466.2|refseq:NP_444295.1|dip:DIP-41629N|entrezgene/locuslink:29979(identity) intact:EBI-16432812(see-also) function:"Defects in TMEM15 are the cause of congenital disorder of glycosylation type 1M (CDG1M) [MIM:610768]; also known as dolichol kinase deficiency. CDGs are a family of severe inherited diseases caused by a defect in glycoprotein biosynthesis. They are characterized by under-glycosylated serum glycoproteins. These multisystem disorders present with a wide variety of clinical features, such as disorders of the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. CDG1M is a very severe disorder with death occurring in early infancy" - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:oVMRd2DWTKCgO7cySF3k2IbBfn09606 rogid:nCFfZbGCTvRYaXhQ4R99XblslvM9606 rigid:sKr41ALojKLKhYejm2Sgr3FdRKo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NF50 uniprotkb:Q9BSJ6 intact:EBI-2548605|uniprotkb:B7ZLP0|uniprotkb:E9PH09|ensembl:ENSP00000394888|uniprotkb:A2A350|uniprotkb:A2BDF2|uniprotkb:A4FU78|uniprotkb:Q3MV16|uniprotkb:Q5JPJ1|uniprotkb:Q8TEP1|uniprotkb:Q8WUY2|uniprotkb:Q9BYJ5|uniprotkb:Q9H1Q2|uniprotkb:Q9H1Q3|uniprotkb:Q9H308|uniprotkb:Q9H7P2|intact:EBI-11070681 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:dock8_human(display_long)|uniprotkb:DOCK8(gene name)|psi-mi:DOCK8(display_short) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467251 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011516347.1|refseq:XP_011516349.1|ensembl:ENSG00000107099(gene)|ensembl:ENST00000432829(transcript)|go:"GO:0001771"(immunological synapse formation)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007264"(small GTPase mediated signal transduction)|go:"GO:0016020"(membrane)|go:"GO:0031256"(leading edge membrane)|go:"GO:0031258"(lamellipodium membrane)|go:"GO:0036336"(dendritic cell migration)|go:"GO:0043547"(positive regulation of GTPase activity)|go:"GO:0051056"(regulation of small GTPase mediated signal transduction)|go:"GO:0061485"(memory T cell proliferation)|go:"GO:0070233"(negative regulation of T cell apoptotic process)|go:"GO:1903905"(positive regulation of establishment of T cell polarity)|go:"GO:1990869"(cellular response to chemokine)|go:"GO:2000406"(positive regulation of T cell migration)|interpro:IPR010703(Dedicator of cytokinesis)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021816|interpro:IPR026791|interpro:IPR027007|interpro:IPR027357|interpro:IPR035892|interpro:IPR037808|interpro:IPR043161|interpro:IPR043162|reactome:R-HSA-9013148|reactome:R-HSA-9013149|reactome:R-HSA-9013409|reactome:R-HSA-983231|refseq:XP_011516350.1|refseq:NP_001177387.1|refseq:NP_001180465.1|refseq:NP_982272.2|refseq:XP_016870662.1|entrezgene/locuslink:81704(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16439048(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4ENO+3IOKfCUicfg8fxFQbwf4fg9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:i9naM6SDUcWAcsgH2HRhBa8mlTI true sufficient binding region:1587-2099 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969L2 uniprotkb:Q9BSJ6 intact:EBI-944295|uniprotkb:Q6ZMD9|uniprotkb:B2R520|ensembl:ENSP00000479708 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:mal2_human(display_long)|uniprotkb:MAL2(gene name)|psi-mi:MAL2(display_short) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467235 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_443118.1|ensembl:ENSG00000147676(gene)|ensembl:ENST00000614891(transcript)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0042552"(myelination)|go:"GO:0045056"(transcytosis)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070062"(extracellular exosome)|interpro:IPR008253(Marvel)|interpro:IPR013295("Myelin and lymphocyte (MAL)")|interpro:IPR033240|entrezgene/locuslink:114569(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16437235(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7SApzrGTzj8V3GIwkdO0X/z6geg9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:pyMAWN8gcMG8BvHX07CAvpnaajg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96ED9-2 uniprotkb:Q9BSJ6 intact:EBI-10961706|ensembl:ENSP00000264827 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:q96ed9-2(display_long)|uniprotkb:HOOK2(gene name)|psi-mi:HOOK2(display_short) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467219 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000095066(gene)|ensembl:ENST00000264827(transcript)|intact:EBI-743290(isoform-parent)|uniprotkb:Q96ED9-2(isoform-parent)|entrezgene/locuslink:29911(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16437215(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aJZ/iDJpRk5dFL1NiouLuTjnOnc9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:wfUpZAUpq7k1LmdHp7BlpVVb3Nc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:Q9BSJ6 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16436002(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:9PAr5YI/fFfX/lsYbrfx9Ac3lSI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7L4P6 uniprotkb:Q9BSJ6 intact:EBI-724373|ensembl:ENSP00000360899|uniprotkb:D3DQ27|uniprotkb:Q96A62|uniprotkb:Q9HAI3|intact:EBI-3044085 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:bend5_human(display_long)|uniprotkb:BEND5(gene name)|psi-mi:BEND5(display_short)|uniprotkb:C1orf165(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467187 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_078879.2|ensembl:ENSG00000162373(gene)|ensembl:ENST00000371833(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR018379|interpro:IPR040391|mint:Q7L4P6|refseq:NP_001289011.1|refseq:XP_011540444.1|refseq:XP_016857823.1|entrezgene/locuslink:79656(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16435214(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:R6OwgNU76FX6tqLRdHVmzEgK8EE9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:o1uK/PjbIh/Aj0MNS94tr4m6VF0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96R06 uniprotkb:Q9BSJ6 intact:EBI-413317|uniprotkb:O95213|uniprotkb:Q9BWE8|uniprotkb:Q9NT17|uniprotkb:Q9UFE6|intact:EBI-28972684|ensembl:ENSP00000323300 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:spag5_human(display_long)|uniprotkb:SPAG5(gene name)|psi-mi:SPAG5(display_short)|uniprotkb:Astrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Deepest(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467171 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006452.3|ensembl:ENSP00000323300|ensembl:ENSG00000076382(gene)|ensembl:ENST00000321765(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|mint:Q96R06|dip:DIP-30998N|entrezgene/locuslink:10615(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16434150(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WOMksaINKpqSxqeGIzbmcSRcgdw9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:hqeECR9+Yf/hoSnqtfk93gTEkdQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 uniprotkb:Q9BSJ6 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467155 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16432218(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:/fegmfVLdC/MrbExQTRzffBtGYs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:Q9BSJ6 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467139 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16432128(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:sFiTwQCqGFywSi62MN6Su2krW9M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:Q9BSJ6 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467120 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16431852(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:H2JbglrA/LBRiTLx1TPAPMZGtak true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NUQ1 uniprotkb:Q9BSJ6 intact:EBI-726876|uniprotkb:Q75MG9|uniprotkb:Q75MH0|uniprotkb:Q96IW8|uniprotkb:Q9H229|uniprotkb:Q9HAD9|intact:EBI-28981798|ensembl:ENSP00000257700 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:rint1_human(display_long)|uniprotkb:RAD50 interactor 1(gene name synonym)|uniprotkb:RINT1(gene name)|psi-mi:RINT1(display_short) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467104 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135249(gene)|ensembl:ENST00000257700(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007095"(mitotic G2 DNA damage checkpoint signaling)|go:"GO:0015031"(protein transport)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:0070939"(Dsl1/NZR complex)|interpro:IPR007528(RINT-1/TIP-1)|interpro:IPR042044|reactome:R-HSA-6811434|refseq:NP_068749.3|ensembl:ENSP00000257700|dip:DIP-36477N|entrezgene/locuslink:60561(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16431615(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUzUSBI8f6ednxeVnP97ifOMoPc9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:OWLuKZexqiy3AxvQ+gndUjTF23I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N1B4 uniprotkb:Q9BSJ6 intact:EBI-2799833|ensembl:ENSP00000372697|ensembl:ENSP00000390831|ensembl:ENSP00000391197|ensembl:ENSP00000404016|ensembl:ENSP00000406988|ensembl:ENSP00000409952|uniprotkb:B4DNI9|uniprotkb:Q9NPT5|uniprotkb:Q8IUN6|uniprotkb:Q5JPA0|uniprotkb:Q53GR4|uniprotkb:Q5SQW1|uniprotkb:B0UZZ4|uniprotkb:A2BF38 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:vps52_human(display_long)|uniprotkb:SACM2L(gene name synonym)|uniprotkb:SAC2 suppressor of actin mutations 2-like protein(gene name synonym)|uniprotkb:VPS52(gene name)|psi-mi:VPS52(display_short) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467088 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000223501(gene)|ensembl:ENSG00000224455(gene)|ensembl:ENSG00000225590(gene)|ensembl:ENSG00000228425(gene)|ensembl:ENSG00000236014(gene)|ensembl:ENST00000383210(transcript)|ensembl:ENST00000428608(transcript)|ensembl:ENST00000441058(transcript)|ensembl:ENST00000443860(transcript)|ensembl:ENST00000445902(transcript)|ensembl:ENST00000448042(transcript)|go:"GO:0000938"(GARP complex)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006896"(Golgi to vacuole transport)|go:"GO:0007041"(lysosomal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010668"(ectodermal cell differentiation)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019905"(syntaxin binding)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048611"(embryonic ectodermal digestive tract development)|go:"GO:0055037"(recycling endosome)|go:"GO:1990745"(EARP complex)|interpro:IPR007258(Vps52/Sac2)|reactome:R-HSA-6811440|ensembl:ENSG00000206286(gene)|refseq:NP_001276104.1|refseq:NP_072047.4|refseq:NP_001276105.1|refseq:XP_016866667.1|dip:DIP-57843N|entrezgene/locuslink:6293(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16430867(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fMptnw5eMhxv+AzDK/+mSKrL7uY9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:VEYrkRwqIMqNyQ4Gvp4/GHDFjns true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:Q9BSJ6 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467072 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16429917(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:sFiTwQCqGFywSi62MN6Su2krW9M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95273 uniprotkb:Q9BSJ6 intact:EBI-748961|uniprotkb:A8K3Q0|uniprotkb:A8K3U2|uniprotkb:Q6ZQN9|uniprotkb:Q7Z519|uniprotkb:Q8NBS7|uniprotkb:Q8NBY2|uniprotkb:Q9NS19|uniprotkb:Q9NYH3|uniprotkb:Q9UHX9|ensembl:ENSP00000300213 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:ccdb1_human(display_long)|uniprotkb:Grap2 and cyclin-D-interacting protein(gene name synonym)|uniprotkb:Human homolog of Maid(gene name synonym)|uniprotkb:CCNDBP1(gene name)|psi-mi:CCNDBP1(display_short)|uniprotkb:DIP1(gene name synonym)|uniprotkb:GCIP(gene name synonym)|uniprotkb:HHM(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467056 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036274.3|ensembl:ENSG00000166946(gene)|ensembl:ENST00000300213(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0016604"(nuclear body)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR026907|mint:O95273|rcsb pdb:3AY5|entrezgene/locuslink:23582(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16428890(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Vi9aoFc+Mov6P3X6KGmsTxXqxvM9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:oVdy0z/sL8nQY4wVN7pC7eagTxk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43365 intact:EBI-16467021 intact:EBI-749530|uniprotkb:Q9NSD3|intact:EBI-10178394|uniprotkb:Q6FHH8|ensembl:ENSP00000350592|ensembl:ENSP00000377447|ensembl:ENSP00000377478 - psi-mi:magac_human(display_long)|uniprotkb:MAGE-12 antigen(gene name synonym)|uniprotkb:MAGE12F antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.12(gene name synonym)|uniprotkb:MAGEA12(gene name)|psi-mi:MAGEA12(display_short)|uniprotkb:MAGE12(gene name synonym) psi-mi:"ccsb isoform id: fam54b_2"(display_short)|psi-mi:EBI-16467021(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467040 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159858.1|refseq:NP_001159859.1|refseq:NP_005358.2|ensembl:ENSG00000213401(gene)|ensembl:ENST00000357916(transcript)|ensembl:ENST00000393869(transcript)|ensembl:ENST00000393900(transcript)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|entrezgene/locuslink:4111(identity) entrezgene/locuslink:56181(identity) intact:EBI-16440312(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3/Jxz2VsFOb67RWqWj3xbTrw3s49606 rogid:s6tB/T5PNwpafrH/RLNC5RLnCn89606 rigid:Mg/HXliSSKCiVCZFso95L3Evuv0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NVT9 intact:EBI-16467021 intact:EBI-3506974|uniprotkb:Q9H018|uniprotkb:Q9H820|uniprotkb:B4E2W7|ensembl:ENSP00000276569 - psi-mi:armc1_human(display_long)|uniprotkb:ARMC1(gene name)|psi-mi:ARMC1(display_short)|uniprotkb:ARCP(gene name synonym) psi-mi:"ccsb isoform id: fam54b_2"(display_short)|psi-mi:EBI-16467021(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467024 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060590.1|ensembl:ENSG00000104442(gene)|ensembl:ENST00000276569(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005829"(cytosol)|go:"GO:0046872"(metal ion binding)|interpro:IPR000225(Armadillo)|interpro:IPR011989(Armadillo-like helical)|go:"GO:0048312"(intracellular distribution of mitochondria)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016617(Uncharacterised conserved protein UCP013899, metal binding)|interpro:IPR036163|mint:Q9NVT9|refseq:NP_001273631.1|refseq:XP_016869094.1|entrezgene/locuslink:55156(identity) entrezgene/locuslink:56181(identity) intact:EBI-16437325(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WP/jzUyBwj/g9TLQ38jY56DYpRI9606 rogid:s6tB/T5PNwpafrH/RLNC5RLnCn89606 rigid:v0q1K18Q39HeDBm3fFkWnuTYI6Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z6M9 intact:EBI-16439278 intact:EBI-16428876 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z6m9_human(display_long)|uniprotkb:FAM126A(gene name)|psi-mi:FAM126A(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467005 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR018619|refseq:XP_005249952.1|entrezgene/locuslink:84668(identity) intact:EBI-16439442(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:BB9OGAPlTXTKfaNW+w3TSxbbHow9606 rigid:jhHPDW+Yjb8M1tzdjfPBmKP9TZI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q9BYI3 intact:EBI-16439278 intact:EBI-11065686|uniprotkb:A0A024RA06|uniprotkb:A4D145|uniprotkb:B8ZZJ1|uniprotkb:Q6N010|uniprotkb:Q75MR4|uniprotkb:Q7LDZ4|uniprotkb:Q96MX1|uniprotkb:Q96NQ6|ensembl:ENSP00000403396|intact:EBI-16428864 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:hycci_human(display_long)|uniprotkb:FAM126A(gene name)|psi-mi:FAM126A(display_short)|uniprotkb:DRCTNNB1A(gene name synonym)|uniprotkb:Down-regulated by CTNNB1 protein A(gene name synonym)|uniprotkb:Protein FAM126A(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466989 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:NP_115970.2|refseq:XP_011513891.1|refseq:XP_005249951.1|ensembl:ENSG00000122591(gene)|ensembl:ENST00000432176(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0042552"(myelination)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0072659"(protein localization to plasma membrane)|interpro:IPR018619|rcsb pdb:5DSE|rcsb pdb:6BQ1|entrezgene/locuslink:84668(identity) intact:EBI-16439442(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:dQX246o/4bB9UkgG+9Be4mIOfxU9606 rigid:0G52UlOtjbg0zUgTgLNO45HrLg0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13643 uniprotkb:A0A0S2Z6M9 intact:EBI-741101|ensembl:ENSP00000362107|uniprotkb:Q6I9T0|uniprotkb:Q9BVA2|uniprotkb:D3DPT6 intact:EBI-16428876 psi-mi:fhl3_human(display_long)|uniprotkb:FHL3(gene name)|psi-mi:FHL3(display_short)|uniprotkb:SLIM2(gene name synonym)|uniprotkb:Skeletal muscle LIM-protein 2(gene name synonym) psi-mi:a0a0s2z6m9_human(display_long)|uniprotkb:FAM126A(gene name)|psi-mi:FAM126A(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466973 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004459.2|ensembl:ENSG00000183386(gene)|ensembl:ENST00000373016(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003779"(actin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005925"(focal adhesion)|go:"GO:0007517"(muscle organ development)|go:"GO:0030018"(Z disc)|go:"GO:0030036"(actin cytoskeleton organization)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q13643|rcsb pdb:1WYH|rcsb pdb:2CUQ|rcsb pdb:2EHE|interpro:IPR037987|refseq:NP_001230807.1|dip:DIP-42030N|entrezgene/locuslink:2275(identity) go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|interpro:IPR018619|refseq:XP_005249952.1|entrezgene/locuslink:84668(identity) intact:EBI-16435564(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RAo+b/VgFSnHSbgR+zXuxJvypxM9606 rogid:BB9OGAPlTXTKfaNW+w3TSxbbHow9606 rigid:7c68waStcr0Oe7MWzEiDNd0slwg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13557-8 uniprotkb:Q13216-2 intact:EBI-11534483|ensembl:ENSP00000296402|ensembl:ENSP00000369098 intact:EBI-16466949|ensembl:ENSP00000494466|ensembl:ENSP00000502154 psi-mi:q13557-8(display_long)|uniprotkb:CAMKD(gene name synonym)|uniprotkb:CAMK2D(gene name)|psi-mi:CAMK2D(display_short) psi-mi:q13216-2(display_long)|uniprotkb:ERCC8(gene name)|psi-mi:ERCC8(display_short)|uniprotkb:CKN1(gene name synonym)|uniprotkb:CSA(gene name synonym)|uniprotkb:Cockayne syndrome WD repeat protein CSA(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466957 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-351018(isoform-parent)|ensembl:ENSG00000145349(gene)|ensembl:ENST00000296402(transcript)|ensembl:ENST00000379773(transcript)|uniprotkb:Q13557-8(isoform-parent)|entrezgene/locuslink:817(identity) intact:EBI-295260(isoform-parent)|uniprotkb:Q13216-2(isoform-parent)|ensembl:ENSG00000049167(gene)|ensembl:ENST00000647486(transcript)|ensembl:ENST00000675229(transcript)|entrezgene/locuslink:1161(identity) intact:EBI-16440912(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:44T/I8JdalScCNE5Vp/H+PnfdFo9606 rogid:Lf4ue+p6QP9+CoKq1z0j6IbDzk89606 rigid:pNv+PvviwHCd/+Zooh0/L5ioDTc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96D09 uniprotkb:Q8IYU8 intact:EBI-473189|ensembl:ENSP00000339057|ensembl:ENSP00000437394|ensembl:ENSP00000437872|ensembl:ENSP00000507692|ensembl:ENSP00000508139|uniprotkb:Q8NAB4|uniprotkb:D3DXA0 intact:EBI-3197790|ensembl:ENSP00000371811|uniprotkb:Q8N0T6|uniprotkb:Q8NAX8 psi-mi:gasp2_human(display_long)|uniprotkb:GPRASP2(gene name)|psi-mi:GPRASP2(display_short) psi-mi:micu2_human(display_long)|uniprotkb:MICU2(gene name)|psi-mi:MICU2(display_short)|uniprotkb:EF-hand domain-containing family member A1(gene name synonym)|uniprotkb:EFHA1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466933 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158301(gene)|ensembl:ENST00000332262(transcript)|ensembl:ENST00000483720(transcript)|ensembl:ENST00000486814(transcript)|ensembl:ENST00000535209(transcript)|ensembl:ENST00000543253(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0061484"(hematopoietic stem cell homeostasis)|interpro:IPR006911(Protein of unknown function DUF634)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR043374|refseq:NP_001004051.1|refseq:NP_001171803.1|refseq:NP_001171804.1|refseq:NP_001171805.1|refseq:NP_001186747.1|refseq:NP_612446.1|entrezgene/locuslink:114928(identity) ensembl:ENSG00000165487(gene)|ensembl:ENST00000382374(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0006851"(mitochondrial calcium ion transmembrane transport)|go:"GO:0034704"(calcium channel complex)|go:"GO:0036444"(calcium import into the mitochondrion)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051560"(mitochondrial calcium ion homeostasis)|go:"GO:0051561"(positive regulation of mitochondrial calcium ion concentration)|go:"GO:0051562"(negative regulation of mitochondrial calcium ion concentration)|go:"GO:1990246"(uniplex complex)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR039800|rcsb pdb:6AGH|rcsb pdb:6IIH|rcsb pdb:6K7Y|rcsb pdb:6LB7|rcsb pdb:6LB8|rcsb pdb:6LE5|rcsb pdb:6WDN|rcsb pdb:6WDO|rcsb pdb:6XJV|rcsb pdb:6XJX|rcsb pdb:6XQN|rcsb pdb:6XQO|reactome:R-HSA-8949215|reactome:R-HSA-8949664|refseq:NP_689939.1|entrezgene/locuslink:221154(identity) intact:EBI-16439974(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUbvpCvGto1y4Rqnri7qaKaygQ89606 rogid:qj7nAE+DvoW/RWlr4VWGSbhS6Mc9606 rigid:ksLVZyn2bja1KF48zbJW1U9k2o8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14188-5 uniprotkb:Q2Z196 intact:EBI-12181237|ensembl:ENSP00000418590|ensembl:ENSP00000420599 intact:EBI-16466898|ensembl:ENSP00000389113 psi-mi:q14188-5(display_long)|uniprotkb:TFDP2(gene name)|psi-mi:TFDP2(display_short)|uniprotkb:DP2(gene name synonym)|uniprotkb:E2F dimerization partner 2(gene name synonym) psi-mi:q2z196_human(display_long)|uniprotkb:E2F6(gene name)|psi-mi:E2F6(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466917 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-752268(isoform-parent)|uniprotkb:Q14188-5(isoform-parent)|ensembl:ENSG00000114126(gene)|ensembl:ENST00000467072(transcript)|ensembl:ENST00000486111(transcript)|entrezgene/locuslink:7029(identity) ensembl:ENSG00000169016(gene)|ensembl:ENST00000421117(transcript)|entrezgene/locuslink:1876(identity) intact:EBI-16439164(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:rdh6QA6IAPo+ksMkB9o5Kn+kKfw9606 rogid:MuHBDwxpZFl1AqkQHVebZ9XMNyc9606 rigid:ktoe5y+VJmI5vUZQvMtOqEOF09s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14186 uniprotkb:Q2Z196 intact:EBI-749713|uniprotkb:Q8IZL5|uniprotkb:Q5JSB4|uniprotkb:B4DLQ9|ensembl:ENSP00000364519 intact:EBI-16466898|ensembl:ENSP00000389113 psi-mi:tfdp1_human(display_long)|uniprotkb:E2F dimerization partner 1(gene name synonym)|uniprotkb:DRTF1-polypeptide 1(gene name synonym)|uniprotkb:TFDP1(gene name)|psi-mi:TFDP1(display_short)|uniprotkb:DP1(gene name synonym) psi-mi:q2z196_human(display_long)|uniprotkb:E2F6(gene name)|psi-mi:E2F6(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466901 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009042.1|refseq:XP_005268388.1|refseq:XP_005268384.1|dip:DIP-238N|ensembl:ENSG00000198176(gene)|ensembl:ENST00000375370(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007049"(cell cycle)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008544"(epidermis development)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0043276"(anoikis)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0070345"(negative regulation of fat cell proliferation)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1900087"(positive regulation of G1/S transition of mitotic cell cycle)|go:"GO:2000278"(regulation of DNA biosynthetic process)|interpro:IPR003316("Transcription factor E2F/dimerisation partner (TDP)")|interpro:IPR014889(Transcription factor DP, C-terminal)|interpro:IPR015648(Transcription factor DP)|interpro:IPR028313|interpro:IPR036388|interpro:IPR036390|interpro:IPR037241|interpro:IPR038168|mint:Q14186|rcsb pdb:2AZE|rcsb pdb:5GOW|rcsb pdb:5TUU|rcsb pdb:5TUV|reactome:R-HSA-111448|reactome:R-HSA-113501|reactome:R-HSA-1362277|reactome:R-HSA-1362300|reactome:R-HSA-139915|reactome:R-HSA-1538133|reactome:R-HSA-1912408|reactome:R-HSA-2173796|reactome:R-HSA-2559580|reactome:R-HSA-2559585|reactome:R-HSA-6804114|reactome:R-HSA-69202|reactome:R-HSA-69205|reactome:R-HSA-69231|reactome:R-HSA-69656|reactome:R-HSA-8953750|reactome:R-HSA-9661069|reactome:R-HSA-9616222|entrezgene/locuslink:7027(identity) ensembl:ENSG00000169016(gene)|ensembl:ENST00000421117(transcript)|entrezgene/locuslink:1876(identity) intact:EBI-16438111(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FvCKBqPptRL9BKBmt+F9kA7oU8k9606 rogid:MuHBDwxpZFl1AqkQHVebZ9XMNyc9606 rigid:ZxA4JyRAfkrq/m/0W99OHp1kMYU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96EA4 uniprotkb:A0A0S2Z5X9 intact:EBI-715381|uniprotkb:Q8TEC8|uniprotkb:Q9HD44|uniprotkb:Q9NX97|uniprotkb:C9JS47|ensembl:ENSP00000265295|uniprotkb:B4E393 intact:EBI-16466729 psi-mi:spdly_human(display_long)|uniprotkb:SPDL1(gene name)|psi-mi:SPDL1(display_short)|uniprotkb:Arsenite-related gene 1 protein(gene name synonym)|uniprotkb:CCDC99(gene name synonym)|uniprotkb:Coiled-coil domain-containing protein 99(gene name synonym)|uniprotkb:Rhabdomyosarcoma antigen MU-RMS-40.4A(gene name synonym)|uniprotkb:Spindle apparatus coiled-coil domain-containing protein 1(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466881 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060255.3|ensembl:ENSG00000040275(gene)|ensembl:ENST00000265295(transcript)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0000922"(spindle pole)|go:"GO:0000940"(outer kinetochore)|go:"GO:0005634"(nucleus)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005829"(cytosol)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0016477"(cell migration)|go:"GO:0019899"(enzyme binding)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0043515"(kinetochore binding)|go:"GO:0051301"(cell division)|interpro:IPR028593|reactome:R-HSA-141444|reactome:R-HSA-2467813|reactome:R-HSA-2500257|reactome:R-HSA-5663220|reactome:R-HSA-68877|reactome:R-HSA-9648025|refseq:NP_001316570.1|dip:DIP-47296N|entrezgene/locuslink:54908(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16437624(see-also)|intact:EBI-16437634(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CzXKB2VOL2ZBmQjyc4vGxQ0cTnY9606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:X13wQgydSj0ihGCODPcFtZvBg9c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P13646 uniprotkb:A0A0S2Z5X9 intact:EBI-1223876|uniprotkb:Q53G54|uniprotkb:Q6AZK5|uniprotkb:Q8N240|ensembl:ENSP00000246635 intact:EBI-16466729 psi-mi:k1c13_human(display_long)|uniprotkb:KRT13(gene name)|psi-mi:KRT13(display_short)|uniprotkb:Keratin-13(gene name synonym)|uniprotkb:Cytokeratin-13(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466865 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002265.2|refseq:NP_705694.2|ensembl:ENSG00000171401(gene)|ensembl:ENST00000246635(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0045095"(keratin filament)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3860(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16435900(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u65zix/f6VQ+vmbfMhXWqmiERRY9606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:mkbsRmqVDmpfjG7UGiH6tEOrU8Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P13646 uniprotkb:Q8WXU2-2 intact:EBI-1223876|uniprotkb:Q53G54|uniprotkb:Q6AZK5|uniprotkb:Q8N240|ensembl:ENSP00000246635 intact:EBI-9381887|ensembl:ENSP00000403412 psi-mi:k1c13_human(display_long)|uniprotkb:KRT13(gene name)|psi-mi:KRT13(display_short)|uniprotkb:Keratin-13(gene name synonym)|uniprotkb:Cytokeratin-13(gene name synonym) psi-mi:q8wxu2-2(display_long)|uniprotkb:DNAAF4(gene name)|psi-mi:DNAAF4(display_short)|uniprotkb:DYX1C1(gene name synonym)|uniprotkb:Dyslexia susceptibility 1 candidate gene 1 protein(gene name synonym)|uniprotkb:EKN1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466849 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002265.2|refseq:NP_705694.2|ensembl:ENSG00000171401(gene)|ensembl:ENST00000246635(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0045095"(keratin filament)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3860(identity) ensembl:ENSG00000256061(gene)|ensembl:ENST00000448430(transcript)|uniprotkb:Q8WXU2-2(isoform-parent)|intact:EBI-2946907(isoform-parent)|entrezgene/locuslink:161582(identity) intact:EBI-16435900(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u65zix/f6VQ+vmbfMhXWqmiERRY9606 rogid:jYtZBqy6D77KSvFPNp8nBddDD1s9606 rigid:MOOBusOlEKu1qfDAyOxYX83rDhU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UNE7 intact:EBI-16430217 intact:EBI-357085|uniprotkb:O60526|uniprotkb:Q969U2|uniprotkb:Q9HBT1|uniprotkb:A2IDB9|ensembl:ENSP00000219548 - psi-mi:chip_human(display_long)|uniprotkb:CHIP(gene name synonym)|uniprotkb:STUB1(gene name)|psi-mi:STUB1(display_short)|uniprotkb:PP1131(orf name)|uniprotkb:Carboxy terminus of Hsp70-interacting protein(gene name synonym)|uniprotkb:STIP1 homology and U box-containing protein 1(gene name synonym)|uniprotkb:CLL-associated antigen KW-8(gene name synonym)|uniprotkb:Antigen NY-CO-7(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase CHIP(gene name synonym) psi-mi:"ccsb isoform id: dyx1c1_3"(display_short)|psi-mi:EBI-16430217(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466833 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-29752N|refseq:NP_005852.2|refseq:NP_001280126.1|ensembl:ENSG00000103266(gene)|ensembl:ENST00000219548(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0002931"(response to ischemia)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019899"(enzyme binding)|go:"GO:0019900"(kinase binding)|go:"GO:0030018"(Z disc)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030544"(Hsp70 protein binding)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031371"(ubiquitin conjugating enzyme complex)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031943"(regulation of glucocorticoid metabolic process)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0034605"(cellular response to heat)|go:"GO:0038128"(ERBB2 signaling pathway)|go:"GO:0042405"(nuclear inclusion body)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045862"(positive regulation of proteolysis)|go:"GO:0046332"(SMAD binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051443"(positive regulation of ubiquitin-protein transferase activity)|go:"GO:0051604"(protein maturation)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0030579"(ubiquitin-dependent SMAD protein catabolic process)|go:"GO:0051879"(Hsp90 protein binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0061684"(chaperone-mediated autophagy)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071218"(cellular response to misfolded protein)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0090035"(positive regulation of chaperone-mediated protein complex assembly)|go:"GO:0101031"(chaperone complex)|interpro:IPR003613(U box)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019734|interpro:IPR041312|mint:Q9UNE7|rcsb pdb:4KBQ|rcsb pdb:6EFK|rcsb pdb:6NSV|reactome:R-HSA-2173788|reactome:R-HSA-5213460|reactome:R-HSA-5675482|reactome:R-HSA-8863795|reactome:R-HSA-8939902|reactome:R-HSA-8948751|reactome:R-HSA-983168|entrezgene/locuslink:10273(identity) entrezgene/locuslink:161582(identity) intact:EBI-16435264(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:h4QyIM0TptgkQppPUgiKn68XjP49606 rogid:m0aEcT+ILE0RLI1nuExTVcJ+UO09606 rigid:Y7vI6BZYDvPL+DCb4s/cPbycINc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UNE7 uniprotkb:A0A0S2Z5X9 intact:EBI-357085|uniprotkb:O60526|uniprotkb:Q969U2|uniprotkb:Q9HBT1|uniprotkb:A2IDB9|ensembl:ENSP00000219548 intact:EBI-16466729 psi-mi:chip_human(display_long)|uniprotkb:CHIP(gene name synonym)|uniprotkb:STUB1(gene name)|psi-mi:STUB1(display_short)|uniprotkb:PP1131(orf name)|uniprotkb:Carboxy terminus of Hsp70-interacting protein(gene name synonym)|uniprotkb:STIP1 homology and U box-containing protein 1(gene name synonym)|uniprotkb:CLL-associated antigen KW-8(gene name synonym)|uniprotkb:Antigen NY-CO-7(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase CHIP(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466817 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-29752N|refseq:NP_005852.2|refseq:NP_001280126.1|ensembl:ENSG00000103266(gene)|ensembl:ENST00000219548(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0002931"(response to ischemia)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019899"(enzyme binding)|go:"GO:0019900"(kinase binding)|go:"GO:0030018"(Z disc)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030544"(Hsp70 protein binding)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030911"(TPR domain binding)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031371"(ubiquitin conjugating enzyme complex)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0031943"(regulation of glucocorticoid metabolic process)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032436"(positive regulation of proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0034450"(ubiquitin-ubiquitin ligase activity)|go:"GO:0034605"(cellular response to heat)|go:"GO:0038128"(ERBB2 signaling pathway)|go:"GO:0042405"(nuclear inclusion body)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0045862"(positive regulation of proteolysis)|go:"GO:0046332"(SMAD binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0051443"(positive regulation of ubiquitin-protein transferase activity)|go:"GO:0051604"(protein maturation)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0030579"(ubiquitin-dependent SMAD protein catabolic process)|go:"GO:0051879"(Hsp90 protein binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0061684"(chaperone-mediated autophagy)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071218"(cellular response to misfolded protein)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0090035"(positive regulation of chaperone-mediated protein complex assembly)|go:"GO:0101031"(chaperone complex)|interpro:IPR003613(U box)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019734|interpro:IPR041312|mint:Q9UNE7|rcsb pdb:4KBQ|rcsb pdb:6EFK|rcsb pdb:6NSV|reactome:R-HSA-2173788|reactome:R-HSA-5213460|reactome:R-HSA-5675482|reactome:R-HSA-8863795|reactome:R-HSA-8939902|reactome:R-HSA-8948751|reactome:R-HSA-983168|entrezgene/locuslink:10273(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16435264(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:h4QyIM0TptgkQppPUgiKn68XjP49606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:nxm4dB1aWljQHkH4QLAda5itvXk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N4Y2-3 uniprotkb:A0A0S2Z5X9 intact:EBI-11982645|ensembl:ENSP00000409256|ensembl:ENSP00000432334 intact:EBI-16466729 psi-mi:q8n4y2-3(display_long)|uniprotkb:CRACR2B(gene name)|psi-mi:CRACR2B(display_short)|uniprotkb:Calcium release-activated calcium channel regulator 2B(gene name synonym)|uniprotkb:Calcium release-activated channel regulator 2B(gene name synonym)|uniprotkb:EFCAB4A(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466801 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q8N4Y2-3(isoform-parent)|intact:EBI-10267893(isoform-parent)|ensembl:ENSG00000177685(gene)|ensembl:ENST00000528542(transcript)|ensembl:ENST00000450448(transcript)|entrezgene/locuslink:283229(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16431201(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:76w0B5349e/QlU4aMfv4UAGek8I9606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:YM5cviATKyPQ/l7HmKlYfbic9FM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N4Y2-3 uniprotkb:Q8WXU2-2 intact:EBI-11982645|ensembl:ENSP00000409256|ensembl:ENSP00000432334 intact:EBI-9381887|ensembl:ENSP00000403412 psi-mi:q8n4y2-3(display_long)|uniprotkb:CRACR2B(gene name)|psi-mi:CRACR2B(display_short)|uniprotkb:Calcium release-activated calcium channel regulator 2B(gene name synonym)|uniprotkb:Calcium release-activated channel regulator 2B(gene name synonym)|uniprotkb:EFCAB4A(gene name synonym) psi-mi:q8wxu2-2(display_long)|uniprotkb:DNAAF4(gene name)|psi-mi:DNAAF4(display_short)|uniprotkb:DYX1C1(gene name synonym)|uniprotkb:Dyslexia susceptibility 1 candidate gene 1 protein(gene name synonym)|uniprotkb:EKN1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466785 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q8N4Y2-3(isoform-parent)|intact:EBI-10267893(isoform-parent)|ensembl:ENSG00000177685(gene)|ensembl:ENST00000528542(transcript)|ensembl:ENST00000450448(transcript)|entrezgene/locuslink:283229(identity) ensembl:ENSG00000256061(gene)|ensembl:ENST00000448430(transcript)|uniprotkb:Q8WXU2-2(isoform-parent)|intact:EBI-2946907(isoform-parent)|entrezgene/locuslink:161582(identity) intact:EBI-16431201(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:76w0B5349e/QlU4aMfv4UAGek8I9606 rogid:jYtZBqy6D77KSvFPNp8nBddDD1s9606 rigid:3xkwFesfv7Klef+eJKTwerSQ4hI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:A0A0S2Z5X9 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-16466729 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466769 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16430761(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:s15I2OfpNaW9fEoq6Gy5yhLnXvg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:Q8WXU2-2 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-9381887|ensembl:ENSP00000403412 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:q8wxu2-2(display_long)|uniprotkb:DNAAF4(gene name)|psi-mi:DNAAF4(display_short)|uniprotkb:DYX1C1(gene name synonym)|uniprotkb:Dyslexia susceptibility 1 candidate gene 1 protein(gene name synonym)|uniprotkb:EKN1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466753 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) ensembl:ENSG00000256061(gene)|ensembl:ENST00000448430(transcript)|uniprotkb:Q8WXU2-2(isoform-parent)|intact:EBI-2946907(isoform-parent)|entrezgene/locuslink:161582(identity) intact:EBI-16430761(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:jYtZBqy6D77KSvFPNp8nBddDD1s9606 rigid:gpAgk7W+1I1/WKapQoyOgrTBmlU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00471 uniprotkb:A0A0S2Z5X9 intact:EBI-949824|ensembl:ENSP00000484855|uniprotkb:B2R6C5|intact:EBI-10171392|uniprotkb:Q8IW24 intact:EBI-16466729 psi-mi:exoc5_human(display_long)|uniprotkb:Exocyst complex component Sec10(gene name synonym)|uniprotkb:EXOC5(gene name)|psi-mi:EXOC5(display_short)|uniprotkb:SEC10(gene name synonym)|uniprotkb:SEC10L1(gene name synonym) psi-mi:a0a0s2z5x9_human(display_long)|uniprotkb:DYX1C1(gene name)|psi-mi:DYX1C1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16466737 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000070367(gene)|ensembl:ENST00000621441(transcript)|go:"GO:0000145"(exocyst)|go:"GO:0001736"(establishment of planar polarity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006887"(exocytosis)|go:"GO:0006892"(post-Golgi vesicle-mediated transport)|go:"GO:0006893"(Golgi to plasma membrane transport)|go:"GO:0015031"(protein transport)|go:"GO:0030496"(midbody)|go:"GO:0031267"(small GTPase binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0072659"(protein localization to plasma membrane)|go:"GO:1904019"(epithelial cell apoptotic process)|go:"GO:1905515"(non-motile cilium assembly)|interpro:IPR009976(Exocyst complex component Sec10)|interpro:IPR033960|mint:O00471|reactome:R-HSA-1445148|reactome:R-HSA-264876|reactome:R-HSA-5620916|refseq:NP_006535.1|entrezgene/locuslink:10640(identity) go:"GO:0003341"(cilium movement)|go:"GO:0005634"(nucleus)|go:"GO:0007399"(nervous system development)|go:"GO:0043005"(neuron projection)|interpro:IPR037894|interpro:IPR007052(CS domain)|interpro:IPR008978(HSP20-like chaperone)|interpro:IPR011990(Tetratricopeptide-like helical)|entrezgene/locuslink:161582(identity) intact:EBI-16430219(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UaEk0DAH+boE9+hl8z3VUUI78dM9606 rogid:3LLU6rV0aXiXARV+8aVc7WDqFiQ9606 rigid:L3uoaWobFnPAhT8VaRjD9rj+60Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96DZ9-2 uniprotkb:Q9BSJ6 intact:EBI-11522780|ensembl:ENSP00000352270|ensembl:ENSP00000497215 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:q96dz9-2(display_long)|uniprotkb:CMTM5(gene name)|psi-mi:CMTM5(display_short)|uniprotkb:CKLFSF5(gene name synonym)|uniprotkb:Chemokine-like factor superfamily member 5(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467286 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166091(gene)|ensembl:ENST00000359320(transcript)|ensembl:ENST00000649278(transcript)|intact:EBI-2548702(isoform-parent)|uniprotkb:Q96DZ9-2(isoform-parent)|entrezgene/locuslink:116173(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16439994(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2TJ7rZKQNb5hH5gz9i+ujOEOIOg9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:AmJaI7kgWRgy9LQxEivk42xb6D8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:Q9BSJ6 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467270 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16439080(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:HaL/t9TltJZzvmbvScc+5r7n8qo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14964 uniprotkb:A0A0S2Z3S1 intact:EBI-740220|uniprotkb:Q9NR36|ensembl:ENSP00000331201|ensembl:ENSP00000504106 intact:EBI-16439494 psi-mi:hgs_human(display_long)|uniprotkb:Protein pp110(gene name synonym)|uniprotkb:Hrs(gene name synonym)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short)|uniprotkb:HRS(gene name synonym) psi-mi:a0a0s2z3s1_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467321 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004703.1|dip:DIP-29050N|ensembl:ENSG00000185359(gene)|ensembl:ENST00000329138(transcript)|ensembl:ENST00000676546(transcript)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0007165"(signal transduction)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010324"(membrane invagination)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0016197"(endosomal transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030948"(negative regulation of vascular endothelial growth factor receptor signaling pathway)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033565"(ESCRT-0 complex)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0042176"(regulation of protein catabolic process)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043405"(regulation of MAP kinase activity)|go:"GO:0044389"(ubiquitin-like protein ligase binding)|go:"GO:0046426"(negative regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0097013"(phagocytic vesicle lumen)|go:"GO:1903543"(positive regulation of exosomal secretion)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR002014(VHS)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR008942(ENTH/VHS)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR024641|mint:O14964|rcsb pdb:2D3G|rcsb pdb:3F1I|rcsb pdb:3OBQ|rcsb pdb:3ZYQ|rcsb pdb:4AVX|reactome:R-HSA-182971|reactome:R-HSA-432720|reactome:R-HSA-5689880|reactome:R-HSA-6807004|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-8875360|reactome:R-HSA-9013420|reactome:R-HSA-917729|reactome:R-HSA-9635644|reactome:R-HSA-9636383|reactome:R-HSA-9706019|entrezgene/locuslink:9146(identity) go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043240"(Fanconi anaemia nuclear complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR039684|entrezgene/locuslink:2189(identity) intact:EBI-16433881(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:z/AnREuqEpyJ9/Zj6JFCJCJem1I9606 rogid:mkRCuC2B7qX+asLEBAYHJIHfdbU9606 rigid:d2VOJY77uH0qNeQW1wmIHZwKqgA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14964 uniprotkb:A0A0S2Z3W0 intact:EBI-740220|uniprotkb:Q9NR36|ensembl:ENSP00000331201|ensembl:ENSP00000504106 intact:EBI-16467337 psi-mi:hgs_human(display_long)|uniprotkb:Protein pp110(gene name synonym)|uniprotkb:Hrs(gene name synonym)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short)|uniprotkb:HRS(gene name synonym) psi-mi:a0a0s2z3w0_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467340 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004703.1|dip:DIP-29050N|ensembl:ENSG00000185359(gene)|ensembl:ENST00000329138(transcript)|ensembl:ENST00000676546(transcript)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0007165"(signal transduction)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010324"(membrane invagination)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0016197"(endosomal transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030948"(negative regulation of vascular endothelial growth factor receptor signaling pathway)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033565"(ESCRT-0 complex)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0042176"(regulation of protein catabolic process)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043405"(regulation of MAP kinase activity)|go:"GO:0044389"(ubiquitin-like protein ligase binding)|go:"GO:0046426"(negative regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0097013"(phagocytic vesicle lumen)|go:"GO:1903543"(positive regulation of exosomal secretion)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR002014(VHS)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR008942(ENTH/VHS)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR024641|mint:O14964|rcsb pdb:2D3G|rcsb pdb:3F1I|rcsb pdb:3OBQ|rcsb pdb:3ZYQ|rcsb pdb:4AVX|reactome:R-HSA-182971|reactome:R-HSA-432720|reactome:R-HSA-5689880|reactome:R-HSA-6807004|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-8875360|reactome:R-HSA-9013420|reactome:R-HSA-917729|reactome:R-HSA-9635644|reactome:R-HSA-9636383|reactome:R-HSA-9706019|entrezgene/locuslink:9146(identity) entrezgene/locuslink:2189(identity) intact:EBI-16433881(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:z/AnREuqEpyJ9/Zj6JFCJCJem1I9606 rogid:i9+i1HUZHQw91ZxR7+Lqa5h8WF09606 rigid:GVDtFl6K+6dXXDgaa3MvUwGU8Q8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:A0A0S2Z3S1 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-16439494 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:a0a0s2z3s1_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467356 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043240"(Fanconi anaemia nuclear complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR039684|entrezgene/locuslink:2189(identity) intact:EBI-16438051(see-also)|intact:EBI-16438061(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:mkRCuC2B7qX+asLEBAYHJIHfdbU9606 rigid:sxDBZCrF3FDKBOm77xgOYhVvAJM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:A0A0S2Z3W0 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-16467337 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:a0a0s2z3w0_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467373 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) entrezgene/locuslink:2189(identity) intact:EBI-16438051(see-also)|intact:EBI-16438061(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:i9+i1HUZHQw91ZxR7+Lqa5h8WF09606 rigid:ASs+B/85HSdSkw7dgRt5I8l2tI4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:A0A0S2Z3S1 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-16439494 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:a0a0s2z3s1_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467390 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043240"(Fanconi anaemia nuclear complex)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|interpro:IPR039684|entrezgene/locuslink:2189(identity) intact:EBI-16439809(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:mkRCuC2B7qX+asLEBAYHJIHfdbU9606 rigid:udqlk9foab/G3FXs98eGQSjfoJI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:A0A0S2Z3W0 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-16467337 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:a0a0s2z3w0_human(display_long)|uniprotkb:FANCG(gene name)|psi-mi:FANCG(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467406 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) entrezgene/locuslink:2189(identity) intact:EBI-16439809(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:i9+i1HUZHQw91ZxR7+Lqa5h8WF09606 rigid:Lriz4YAhPWNVlJipgQsP8YDPb2k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15645 uniprotkb:Q9NRD0 intact:EBI-358993|uniprotkb:C9K0T3|uniprotkb:O15324|ensembl:ENSP00000166345|uniprotkb:D3DTC0 intact:EBI-11615366|uniprotkb:B2RB40|uniprotkb:D3DP41|uniprotkb:G5E9Z0|uniprotkb:Q6UWN4|uniprotkb:Q8IWE1|uniprotkb:Q9NRP5|uniprotkb:Q9UKC4|ensembl:ENSP00000377280 psi-mi:pch2_human(display_long)|uniprotkb:TRIP13(gene name)|psi-mi:TRIP13(display_short)|uniprotkb:Thyroid receptor-interacting protein 13(gene name synonym)|uniprotkb:PCH2(gene name synonym)|uniprotkb:Thyroid hormone receptor interactor 13(gene name synonym)|uniprotkb:Human papillomavirus type 16 E1 protein-binding protein(gene name synonym) psi-mi:fbx8_human(display_long)|uniprotkb:FBXO8(gene name)|psi-mi:FBXO8(display_short)|uniprotkb:FBS(gene name synonym)|uniprotkb:FBX8(gene name synonym)|uniprotkb:DC10(orf name)|uniprotkb:UNQ1877/PRO4320(orf name)|uniprotkb:F-box/SEC7 protein FBS(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467422 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004228.1|ensembl:ENSG00000071539(gene)|ensembl:ENST00000166345(transcript)|go:"GO:0001556"(oocyte maturation)|go:"GO:0001673"(male germ cell nucleus)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|refseq:XP_011512465.1|dip:DIP-34493N|go:"GO:0005694"(chromosome)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0007141"(male meiosis I)|go:"GO:0007144"(female meiosis I)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007286"(spermatid development)|go:"GO:0042802"(identical protein binding)|go:"GO:0048477"(oogenesis)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001270(Chaperonin clpA/B)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR027417|interpro:IPR044539|mint:Q15645|rcsb pdb:5VQ9|rcsb pdb:5VQA|rcsb pdb:5WC2|rcsb pdb:6F0X|rcsb pdb:6LK0|rcsb pdb:7L9P|entrezgene/locuslink:9319(identity) refseq:NP_036312.2|ensembl:ENSG00000164117(gene)|ensembl:ENST00000393674(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0005085"(guanyl-nucleotide exchange factor activity)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0032012"(regulation of ARF protein signal transduction)|interpro:IPR000904(SEC7-like)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR023394|interpro:IPR035999|interpro:IPR036047|entrezgene/locuslink:26269(identity) intact:EBI-16434724(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:heF2f3R2lGIpZ80mZHnhMktXTE49606 rogid:iw1wQu/WnQC2vnge/KH840EAPr89606 rigid:lbiO5UVLUdwL3MTUOM8DxO5IYCw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:Q9BSJ6 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-2568609|uniprotkb:Q96CT4|uniprotkb:Q9NVV1|uniprotkb:Q9NWB5|intact:EBI-16428888|ensembl:ENSP00000250056 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:pimre_human(display_long)|uniprotkb:PICALM-interacting mitotic regulator(gene name synonym)|uniprotkb:PIMREG(gene name)|psi-mi:PIMREG(display_short)|uniprotkb:CALM-interactor expressed in thymus and spleen(gene name synonym)|uniprotkb:CATS(gene name synonym)|uniprotkb:FAM64A(gene name synonym)|uniprotkb:RCS1(gene name synonym)|uniprotkb:Regulator of chromosome segregation protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467302 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) refseq:NP_001182157.1|refseq:NP_061886.2|dip:DIP-56370N|ensembl:ENSG00000129195(gene)|ensembl:ENST00000250056(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|interpro:IPR009932(Protein of unknown function DUF1466)|entrezgene/locuslink:54478(identity) intact:EBI-16440764(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:BLU00PQAlRtdcBQW2AB7nRFR+iw9606 rigid:veDnZvJLUXdys9unRCLGl4QZc2A true sufficient binding region:32-313 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:O14964 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-740220|uniprotkb:Q9NR36|ensembl:ENSP00000331201|ensembl:ENSP00000504106 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:hgs_human(display_long)|uniprotkb:Protein pp110(gene name synonym)|uniprotkb:Hrs(gene name synonym)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short)|uniprotkb:HRS(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467834 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_004703.1|dip:DIP-29050N|ensembl:ENSG00000185359(gene)|ensembl:ENST00000329138(transcript)|ensembl:ENST00000676546(transcript)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0007165"(signal transduction)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010324"(membrane invagination)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0016197"(endosomal transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030948"(negative regulation of vascular endothelial growth factor receptor signaling pathway)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033565"(ESCRT-0 complex)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0042176"(regulation of protein catabolic process)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043405"(regulation of MAP kinase activity)|go:"GO:0044389"(ubiquitin-like protein ligase binding)|go:"GO:0046426"(negative regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0097013"(phagocytic vesicle lumen)|go:"GO:1903543"(positive regulation of exosomal secretion)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR002014(VHS)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR008942(ENTH/VHS)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR024641|mint:O14964|rcsb pdb:2D3G|rcsb pdb:3F1I|rcsb pdb:3OBQ|rcsb pdb:3ZYQ|rcsb pdb:4AVX|reactome:R-HSA-182971|reactome:R-HSA-432720|reactome:R-HSA-5689880|reactome:R-HSA-6807004|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-8875360|reactome:R-HSA-9013420|reactome:R-HSA-917729|reactome:R-HSA-9635644|reactome:R-HSA-9636383|reactome:R-HSA-9706019|entrezgene/locuslink:9146(identity) intact:EBI-16431864(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:z/AnREuqEpyJ9/Zj6JFCJCJem1I9606 rigid:9rOFVAZ6zJQVQJ3FnYuf7dHFnuQ true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:Q8WW76 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-16467458 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:q8ww76_human(display_long)|uniprotkb:FGA(gene name)|psi-mi:FGA(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467470 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) go:"GO:0051258"(protein polymerization)|go:"GO:0030168"(platelet activation)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005577"(fibrinogen complex)|interpro:IPR012290(Fibrinogen, alpha/beta/gamma chain, coiled coil)|interpro:IPR037579|entrezgene/locuslink:2243(identity) intact:EBI-16439092(see-also)|intact:EBI-16439104(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:KyNpb3Z1gdvzVwZ5muhihBKkF249606 rigid:tRSNnZlta/WnIl+7vG2U6Rcnb5Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:A0A0S2Z3E8 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-16439506 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:a0a0s2z3e8_human(display_long)|uniprotkb:FGA(gene name)|psi-mi:FGA(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467487 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) go:"GO:0005102"(signaling receptor binding)|go:"GO:0005577"(fibrinogen complex)|go:"GO:0030168"(platelet activation)|go:"GO:0051258"(protein polymerization)|interpro:IPR012290(Fibrinogen, alpha/beta/gamma chain, coiled coil)|interpro:IPR037579|entrezgene/locuslink:2243(identity) intact:EBI-16439092(see-also)|intact:EBI-16439104(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:SYq0A8PukG7MmEnVdnJftwnVatk9606 rigid:7amqe5BJlpz21IIHbBcf84MkwbM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q8WW76 intact:EBI-16439278 intact:EBI-16467458 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:q8ww76_human(display_long)|uniprotkb:FGA(gene name)|psi-mi:FGA(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467504 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) go:"GO:0051258"(protein polymerization)|go:"GO:0030168"(platelet activation)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005577"(fibrinogen complex)|interpro:IPR012290(Fibrinogen, alpha/beta/gamma chain, coiled coil)|interpro:IPR037579|entrezgene/locuslink:2243(identity) intact:EBI-16439517(see-also)|intact:EBI-16439527(see-also)|intact:EBI-16439537(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:KyNpb3Z1gdvzVwZ5muhihBKkF249606 rigid:iHPGYBhNr/M8cpcqGe5kGV1RIKA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95273 uniprotkb:P07954 intact:EBI-748961|uniprotkb:A8K3Q0|uniprotkb:A8K3U2|uniprotkb:Q6ZQN9|uniprotkb:Q7Z519|uniprotkb:Q8NBS7|uniprotkb:Q8NBY2|uniprotkb:Q9NS19|uniprotkb:Q9NYH3|uniprotkb:Q9UHX9|ensembl:ENSP00000300213 intact:EBI-1050358|uniprotkb:B1ANK7|ensembl:ENSP00000355518 psi-mi:ccdb1_human(display_long)|uniprotkb:Grap2 and cyclin-D-interacting protein(gene name synonym)|uniprotkb:Human homolog of Maid(gene name synonym)|uniprotkb:CCNDBP1(gene name)|psi-mi:CCNDBP1(display_short)|uniprotkb:DIP1(gene name synonym)|uniprotkb:GCIP(gene name synonym)|uniprotkb:HHM(gene name synonym) psi-mi:fumh_human(display_long)|uniprotkb:FH(gene name)|psi-mi:FH(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467522 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036274.3|ensembl:ENSG00000166946(gene)|ensembl:ENST00000300213(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0016604"(nuclear body)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR026907|mint:O95273|rcsb pdb:3AY5|entrezgene/locuslink:23582(identity) refseq:NP_000134.2|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006106"(fumarate metabolic process)|go:"GO:0006108"(malate metabolic process)|go:"GO:0006281"(DNA repair)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042393"(histone binding)|go:"GO:0045239"(tricarboxylic acid cycle enzyme complex)|go:"GO:0048873"(homeostasis of number of cells within a tissue)|go:"GO:0070062"(extracellular exosome)|go:"GO:0120162"(positive regulation of cold-induced thermogenesis)|go:"GO:2001034"(positive regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000362(Fumarate lyase)|interpro:IPR005677(Fumarate hydratase, class II)|ensembl:ENSG00000091483(gene)|interpro:IPR008948(L-Aspartase-like)|interpro:IPR018951|ensembl:ENST00000366560(transcript)|interpro:IPR020557|interpro:IPR022761|go:"GO:0000050"(urea cycle)|interpro:IPR024083|mint:P07954|rcsb pdb:3E04|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|rcsb pdb:5D6B|go:"GO:0000821"(regulation of arginine metabolic process)|rcsb pdb:5UPP|rcsb pdb:6EBT|rcsb pdb:6V8F|rcsb pdb:6VBE|go:"GO:0004333"(fumarate hydratase activity)|reactome:R-HSA-71403|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|dip:DIP-46920N|entrezgene/locuslink:2271(identity) intact:EBI-16428911(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Vi9aoFc+Mov6P3X6KGmsTxXqxvM9606 rogid:Jukx6wt0vi49nxgaTzdz5x1Q2Mc9606 rigid:bbpYItEBprS5Gc3uLow0s9CPNXg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95273 uniprotkb:A0A0S2Z4H0 intact:EBI-748961|uniprotkb:A8K3Q0|uniprotkb:A8K3U2|uniprotkb:Q6ZQN9|uniprotkb:Q7Z519|uniprotkb:Q8NBS7|uniprotkb:Q8NBY2|uniprotkb:Q9NS19|uniprotkb:Q9NYH3|uniprotkb:Q9UHX9|ensembl:ENSP00000300213 intact:EBI-16467538 psi-mi:ccdb1_human(display_long)|uniprotkb:Grap2 and cyclin-D-interacting protein(gene name synonym)|uniprotkb:Human homolog of Maid(gene name synonym)|uniprotkb:CCNDBP1(gene name)|psi-mi:CCNDBP1(display_short)|uniprotkb:DIP1(gene name synonym)|uniprotkb:GCIP(gene name synonym)|uniprotkb:HHM(gene name synonym) psi-mi:a0a0s2z4h0_human(display_long)|uniprotkb:FH(gene name)|psi-mi:FH(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467552 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036274.3|ensembl:ENSG00000166946(gene)|ensembl:ENST00000300213(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0016604"(nuclear body)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR026907|mint:O95273|rcsb pdb:3AY5|entrezgene/locuslink:23582(identity) go:"GO:0004333"(fumarate hydratase activity)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006106"(fumarate metabolic process)|go:"GO:0045239"(tricarboxylic acid cycle enzyme complex)|interpro:IPR005677(Fumarate hydratase, class II)|interpro:IPR024083|interpro:IPR018951|interpro:IPR022761|interpro:IPR008948(L-Aspartase-like)|entrezgene/locuslink:2271(identity) intact:EBI-16428911(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Vi9aoFc+Mov6P3X6KGmsTxXqxvM9606 rogid:ILOCbSyaw1/FI9WqVHCYNaKIB6o9606 rigid:d5Xy2RDBdtkkdwxkRf61SOX8d9A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:Q99259 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-743184|ensembl:ENSP00000350928|uniprotkb:Q53TQ7|uniprotkb:Q9BU91|uniprotkb:Q9UHH4|uniprotkb:Q49AK1 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:dce1_human(display_long)|uniprotkb:Glutamate decarboxylase 67 kDa isoform(gene name synonym)|uniprotkb:67 kDa glutamic acid decarboxylase(gene name synonym)|uniprotkb:GAD1(gene name)|psi-mi:GAD1(display_short)|uniprotkb:GAD(gene name synonym)|uniprotkb:GAD67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467568 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) refseq:NP_000808.2|refseq:NP_038473.2|ensembl:ENSG00000128683(gene)|ensembl:ENST00000358196(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0061202"(clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006540"(glutamate decarboxylation to succinate)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0009449"(gamma-aminobutyric acid biosynthetic process)|go:"GO:0012506"(vesicle membrane)|go:"GO:0016595"(glutamate binding)|go:"GO:0018352"(protein-pyridoxal-5-phosphate linkage)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035176"(social behavior)|go:"GO:0035641"(locomotory exploration behavior)|go:"GO:0042136"(neurotransmitter biosynthetic process)|go:"GO:0042493"|go:"GO:0043679"(axon terminus)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|mint:Q99259|rcsb pdb:2OKJ|rcsb pdb:3VP6|reactome:R-HSA-888568|reactome:R-HSA-888590|reactome:R-HSA-9022927|refseq:XP_011509224.1|refseq:XP_005246501.1|refseq:XP_016859245.1|refseq:XP_016859247.1|dip:DIP-29292N|entrezgene/locuslink:2571(identity) intact:EBI-16430773(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:tFlqx11D9m3HofJUdpZynm2jKIQ9606 rigid:6yqsQ8P7ioS1J5/wXfT8brutlfo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 intact:EBI-16467584 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 - psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467587 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) entrezgene/locuslink:2571(identity) intact:EBI-16430773(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:cyNJsKXk1cCm2d7/hPh83QHFXrU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 uniprotkb:Q99259 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 intact:EBI-743184|ensembl:ENSP00000350928|uniprotkb:Q53TQ7|uniprotkb:Q9BU91|uniprotkb:Q9UHH4|uniprotkb:Q49AK1 psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:dce1_human(display_long)|uniprotkb:Glutamate decarboxylase 67 kDa isoform(gene name synonym)|uniprotkb:67 kDa glutamic acid decarboxylase(gene name synonym)|uniprotkb:GAD1(gene name)|psi-mi:GAD1(display_short)|uniprotkb:GAD(gene name synonym)|uniprotkb:GAD67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467603 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) refseq:NP_000808.2|refseq:NP_038473.2|ensembl:ENSG00000128683(gene)|ensembl:ENST00000358196(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0061202"(clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006540"(glutamate decarboxylation to succinate)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0009449"(gamma-aminobutyric acid biosynthetic process)|go:"GO:0012506"(vesicle membrane)|go:"GO:0016595"(glutamate binding)|go:"GO:0018352"(protein-pyridoxal-5-phosphate linkage)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035176"(social behavior)|go:"GO:0035641"(locomotory exploration behavior)|go:"GO:0042136"(neurotransmitter biosynthetic process)|go:"GO:0042493"|go:"GO:0043679"(axon terminus)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|mint:Q99259|rcsb pdb:2OKJ|rcsb pdb:3VP6|reactome:R-HSA-888568|reactome:R-HSA-888590|reactome:R-HSA-9022927|refseq:XP_011509224.1|refseq:XP_005246501.1|refseq:XP_016859245.1|refseq:XP_016859247.1|dip:DIP-29292N|entrezgene/locuslink:2571(identity) intact:EBI-16434433(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:tFlqx11D9m3HofJUdpZynm2jKIQ9606 rigid:99wCOpsohF+jq4jLhPfVr08LoqI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 intact:EBI-16467584 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 - psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467619 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) entrezgene/locuslink:2571(identity) intact:EBI-16434433(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:hVidg71t0Q6qfqDEBP7oNt3r2jc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 intact:EBI-16467584 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 - psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467635 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) entrezgene/locuslink:2571(identity) intact:EBI-16436031(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:Rf3FBuXC3qc6TlA7io6rQ9ycVqA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15323 uniprotkb:Q99259 intact:EBI-948001|uniprotkb:Q9UE12|ensembl:ENSP00000251645|ensembl:ENSP00000460739 intact:EBI-743184|ensembl:ENSP00000350928|uniprotkb:Q53TQ7|uniprotkb:Q9BU91|uniprotkb:Q9UHH4|uniprotkb:Q49AK1 psi-mi:k1h1_human(display_long)|uniprotkb:Hair keratin, type I Ha1(gene name synonym)|uniprotkb:Keratin-31(gene name synonym)|uniprotkb:KRT31(gene name)|psi-mi:KRT31(display_short)|uniprotkb:HHA1(gene name synonym)|uniprotkb:HKA1(gene name synonym)|uniprotkb:KRTHA1(gene name synonym) psi-mi:dce1_human(display_long)|uniprotkb:Glutamate decarboxylase 67 kDa isoform(gene name synonym)|uniprotkb:67 kDa glutamic acid decarboxylase(gene name synonym)|uniprotkb:GAD1(gene name)|psi-mi:GAD1(display_short)|uniprotkb:GAD(gene name synonym)|uniprotkb:GAD67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467651 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002268.2|ensembl:ENSG00000094796(gene)|ensembl:ENSG00000262993(gene)|ensembl:ENST00000251645(transcript)|ensembl:ENST00000573281(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3881(identity) refseq:NP_000808.2|refseq:NP_038473.2|ensembl:ENSG00000128683(gene)|ensembl:ENST00000358196(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0061202"(clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006540"(glutamate decarboxylation to succinate)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0009449"(gamma-aminobutyric acid biosynthetic process)|go:"GO:0012506"(vesicle membrane)|go:"GO:0016595"(glutamate binding)|go:"GO:0018352"(protein-pyridoxal-5-phosphate linkage)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035176"(social behavior)|go:"GO:0035641"(locomotory exploration behavior)|go:"GO:0042136"(neurotransmitter biosynthetic process)|go:"GO:0042493"|go:"GO:0043679"(axon terminus)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|mint:Q99259|rcsb pdb:2OKJ|rcsb pdb:3VP6|reactome:R-HSA-888568|reactome:R-HSA-888590|reactome:R-HSA-9022927|refseq:XP_011509224.1|refseq:XP_005246501.1|refseq:XP_016859245.1|refseq:XP_016859247.1|dip:DIP-29292N|entrezgene/locuslink:2571(identity) intact:EBI-16436605(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ur97LEvtqaqu3wh7iaX4HhN163k9606 rogid:tFlqx11D9m3HofJUdpZynm2jKIQ9606 rigid:IBLUcybnTRx7sP3L7MDdB5238as true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15323 intact:EBI-16467584 intact:EBI-948001|uniprotkb:Q9UE12|ensembl:ENSP00000251645|ensembl:ENSP00000460739 - psi-mi:k1h1_human(display_long)|uniprotkb:Hair keratin, type I Ha1(gene name synonym)|uniprotkb:Keratin-31(gene name synonym)|uniprotkb:KRT31(gene name)|psi-mi:KRT31(display_short)|uniprotkb:HHA1(gene name synonym)|uniprotkb:HKA1(gene name synonym)|uniprotkb:KRTHA1(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467667 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002268.2|ensembl:ENSG00000094796(gene)|ensembl:ENSG00000262993(gene)|ensembl:ENST00000251645(transcript)|ensembl:ENST00000573281(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3881(identity) entrezgene/locuslink:2571(identity) intact:EBI-16436605(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ur97LEvtqaqu3wh7iaX4HhN163k9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:2Oao7SqotMIMaVpKfs0gAU7+oSc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969L2 intact:EBI-16467584 intact:EBI-944295|uniprotkb:Q6ZMD9|uniprotkb:B2R520|ensembl:ENSP00000479708 - psi-mi:mal2_human(display_long)|uniprotkb:MAL2(gene name)|psi-mi:MAL2(display_short) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467683 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_443118.1|ensembl:ENSG00000147676(gene)|ensembl:ENST00000614891(transcript)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0042552"(myelination)|go:"GO:0045056"(transcytosis)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070062"(extracellular exosome)|interpro:IPR008253(Marvel)|interpro:IPR013295("Myelin and lymphocyte (MAL)")|interpro:IPR033240|entrezgene/locuslink:114569(identity) entrezgene/locuslink:2571(identity) intact:EBI-16437245(see-also)|intact:EBI-16437255(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7SApzrGTzj8V3GIwkdO0X/z6geg9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:W+D2Ix09eBLMHyidvMSomz9DasM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 intact:EBI-16467584 intact:EBI-11522760|ensembl:ENSP00000365816 - psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467700 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) entrezgene/locuslink:2571(identity) intact:EBI-16439114(see-also)|intact:EBI-16439124(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:bx7WKUrui4ezD7LUl33iICFldWU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96DZ9-2 intact:EBI-16467584 intact:EBI-11522780|ensembl:ENSP00000352270|ensembl:ENSP00000497215 - psi-mi:q96dz9-2(display_long)|uniprotkb:CMTM5(gene name)|psi-mi:CMTM5(display_short)|uniprotkb:CKLFSF5(gene name synonym)|uniprotkb:Chemokine-like factor superfamily member 5(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467717 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166091(gene)|ensembl:ENST00000359320(transcript)|ensembl:ENST00000649278(transcript)|intact:EBI-2548702(isoform-parent)|uniprotkb:Q96DZ9-2(isoform-parent)|entrezgene/locuslink:116173(identity) entrezgene/locuslink:2571(identity) intact:EBI-16440004(see-also)|intact:EBI-16440014(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2TJ7rZKQNb5hH5gz9i+ujOEOIOg9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:mmJgBRmD8pdsbpHSBLpzc/+oA9c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR7 uniprotkb:Q99259 intact:EBI-751260|ensembl:ENSP00000375429|ensembl:ENSP00000459215 intact:EBI-743184|ensembl:ENSP00000350928|uniprotkb:Q53TQ7|uniprotkb:Q9BU91|uniprotkb:Q9UHH4|uniprotkb:Q49AK1 psi-mi:kra32_human(display_long)|uniprotkb:Keratin-associated protein 3.2(gene name synonym)|uniprotkb:High sulfur keratin-associated protein 3.2(gene name synonym)|uniprotkb:KRTAP3-2(gene name)|psi-mi:KRTAP3-2(display_short)|uniprotkb:KAP3.2(gene name synonym)|uniprotkb:KRTAP3.2(gene name synonym) psi-mi:dce1_human(display_long)|uniprotkb:Glutamate decarboxylase 67 kDa isoform(gene name synonym)|uniprotkb:67 kDa glutamic acid decarboxylase(gene name synonym)|uniprotkb:GAD1(gene name)|psi-mi:GAD1(display_short)|uniprotkb:GAD(gene name synonym)|uniprotkb:GAD67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467734 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_114165.1|ensembl:ENSG00000212900(gene)|ensembl:ENSG00000263296(gene)|ensembl:ENST00000391587(transcript)|ensembl:ENST00000575409(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR007659(Keratin, high-sulphur matrix protein)|reactome:R-HSA-6805567|entrezgene/locuslink:83897(identity) refseq:NP_000808.2|refseq:NP_038473.2|ensembl:ENSG00000128683(gene)|ensembl:ENST00000358196(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0060077"(inhibitory synapse)|go:"GO:0061202"(clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0006540"(glutamate decarboxylation to succinate)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0009449"(gamma-aminobutyric acid biosynthetic process)|go:"GO:0012506"(vesicle membrane)|go:"GO:0016595"(glutamate binding)|go:"GO:0018352"(protein-pyridoxal-5-phosphate linkage)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0035176"(social behavior)|go:"GO:0035641"(locomotory exploration behavior)|go:"GO:0042136"(neurotransmitter biosynthetic process)|go:"GO:0042493"|go:"GO:0043679"(axon terminus)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048786"(presynaptic active zone)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|mint:Q99259|rcsb pdb:2OKJ|rcsb pdb:3VP6|reactome:R-HSA-888568|reactome:R-HSA-888590|reactome:R-HSA-9022927|refseq:XP_011509224.1|refseq:XP_005246501.1|refseq:XP_016859245.1|refseq:XP_016859247.1|dip:DIP-29292N|entrezgene/locuslink:2571(identity) intact:EBI-16440206(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2AFUGT7g1vlyF9kv3x5NYu/bv9c9606 rogid:tFlqx11D9m3HofJUdpZynm2jKIQ9606 rigid:Aa7DC819tqvKCHa/IP8v5fp2gL0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR7 intact:EBI-16467584 intact:EBI-751260|ensembl:ENSP00000375429|ensembl:ENSP00000459215 - psi-mi:kra32_human(display_long)|uniprotkb:Keratin-associated protein 3.2(gene name synonym)|uniprotkb:High sulfur keratin-associated protein 3.2(gene name synonym)|uniprotkb:KRTAP3-2(gene name)|psi-mi:KRTAP3-2(display_short)|uniprotkb:KAP3.2(gene name synonym)|uniprotkb:KRTAP3.2(gene name synonym) psi-mi:"ccsb isoform id: gad1_3"(display_short)|psi-mi:EBI-16467584(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467750 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_114165.1|ensembl:ENSG00000212900(gene)|ensembl:ENSG00000263296(gene)|ensembl:ENST00000391587(transcript)|ensembl:ENST00000575409(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR007659(Keratin, high-sulphur matrix protein)|reactome:R-HSA-6805567|entrezgene/locuslink:83897(identity) entrezgene/locuslink:2571(identity) intact:EBI-16440206(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2AFUGT7g1vlyF9kv3x5NYu/bv9c9606 rogid:fNm5SveXKCMEljahMF30mQOgf7Y9606 rigid:O2V/Q2pdzf2/oioWEp78lcnPGWs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q9BRX5 intact:EBI-16439278 intact:EBI-2857315|uniprotkb:B2RDP3|uniprotkb:Q9H870|uniprotkb:E9PB21|ensembl:ENSP00000318196 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:psf3_human(display_long)|uniprotkb:GINS3(gene name)|psi-mi:GINS3(display_short)|uniprotkb:PSF3(gene name synonym)|uniprotkb:GINS complex subunit 3(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467766 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:NP_001119601.1|refseq:NP_001119602.1|refseq:NP_073607.2|dip:DIP-29333N|ensembl:ENSG00000181938(gene)|ensembl:ENST00000318129(transcript)|go:"GO:0000811"(GINS complex)|go:"GO:0005654"(nucleoplasm)|go:"GO:0071162"(CMG complex)|go:"GO:1902975"(mitotic DNA replication initiation)|interpro:IPR010492(GINS complex, Psf3 component)|interpro:IPR021151|interpro:IPR036224|interpro:IPR038437|mint:Q9BRX5|rcsb pdb:2E9X|rcsb pdb:2EHO|rcsb pdb:2Q9Q|rcsb pdb:6XTX|rcsb pdb:6XTY|reactome:R-HSA-176974|entrezgene/locuslink:64785(identity) intact:EBI-16439547(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:3anXwRLIwu/t1G1v+P1yzhh7QqA9606 rigid:2gdXs5udza36qzmAJeEm2Eys5Xk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P49407 uniprotkb:A0A0S2Z5F2 intact:EBI-743313|uniprotkb:O75625|uniprotkb:O75630|uniprotkb:Q2PP20|uniprotkb:Q9BTK8|intact:EBI-2561130|uniprotkb:B6V9G8|ensembl:ENSP00000409581 intact:EBI-16440982 psi-mi:arrb1_human(display_long)|uniprotkb:Arrestin beta-1(gene name synonym)|uniprotkb:ARRB1(gene name)|psi-mi:ARRB1(display_short)|uniprotkb:ARR1(gene name synonym)|uniprotkb:Non-visual arrestin-2(gene name synonym) psi-mi:a0a0s2z5f2_human(display_long)|uniprotkb:GNMT(gene name)|psi-mi:GNMT(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467782 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004032.2|refseq:NP_064647.1|ensembl:ENSG00000137486(gene)|ensembl:ENST00000420843(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000785"(chromatin)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0000187"(obsolete activation of MAPK activity)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002031"(G protein-coupled receptor internalization)|go:"GO:0002092"(positive regulation of receptor internalization)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004857"(enzyme inhibitor activity)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015031"(protein transport)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016604"(nuclear body)|go:"GO:0016573"(histone acetylation)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031143"(pseudopodium)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031691"(alpha-1A adrenergic receptor binding)|go:"GO:0031692"(alpha-1B adrenergic receptor binding)|go:"GO:0031701"(angiotensin receptor binding)|go:"GO:0031762"(follicle-stimulating hormone receptor binding)|go:"GO:0031896"(V2 vasopressin receptor binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0032715"(negative regulation of interleukin-6 production)|go:"GO:0032717"(negative regulation of interleukin-8 production)|go:"GO:0034260"(negative regulation of GTPase activity)|go:"GO:0034393"(positive regulation of smooth muscle cell apoptotic process)|go:"GO:0035025"(positive regulation of Rho protein signal transduction)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0035612"(AP-2 adaptor complex binding)|go:"GO:0035615"(clathrin adaptor activity)|go:"GO:0042493"|go:"GO:0042699"(follicle-stimulating hormone signaling pathway)|go:"GO:0043149"(stress fiber assembly)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043197"(dendritic spine)|go:"GO:0043280"(positive regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0090240"(positive regulation of histone H4 acetylation)|go:"GO:1990763"(arrestin family protein binding)|interpro:IPR000698(Arrestin)|interpro:IPR011021(Arrestin-like, N-terminal)|interpro:IPR011022(Arrestin-like, C-terminal)|interpro:IPR014752(Arrestin, C-terminal)|interpro:IPR014753(Arrestin, N-terminal)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR017864|mint:P49407|rcsb pdb:2IV8|rcsb pdb:6PWC|rcsb pdb:6TKO|rcsb pdb:6UP7|reactome:R-HSA-2122948|reactome:R-HSA-418555|reactome:R-HSA-432720|reactome:R-HSA-432722|reactome:R-HSA-456926|reactome:R-HSA-5635838|reactome:R-HSA-5674135|reactome:R-HSA-5689880|reactome:R-HSA-6802946|reactome:R-HSA-6802948|reactome:R-HSA-6802952|reactome:R-HSA-6802955|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-9649948|reactome:R-HSA-9656223|dip:DIP-29979N|entrezgene/locuslink:408(identity) interpro:IPR041698|go:"GO:0017174"(glycine N-methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:NP_001305794.1|interpro:IPR014369(Glycine N-methyltransferase)|interpro:IPR029063|entrezgene/locuslink:27232(identity) intact:EBI-16434180(see-also) - - comment:"Evidence for isoform CCSB isoform ID: GNMT_3 expression is provided in figureS2H."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UNYbZY5saRx8CwJ8Jwt3QtjXgj09606 rogid:fJAMGRDcSZgsh1BDT1O6WFgX1mc9606 rigid:2sSYsEZmwNO2BNdo9alDQe6W8K8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P49407 uniprotkb:A0A0S2Z594 intact:EBI-743313|uniprotkb:O75625|uniprotkb:O75630|uniprotkb:Q2PP20|uniprotkb:Q9BTK8|intact:EBI-2561130|uniprotkb:B6V9G8|ensembl:ENSP00000409581 intact:EBI-16467798 psi-mi:arrb1_human(display_long)|uniprotkb:Arrestin beta-1(gene name synonym)|uniprotkb:ARRB1(gene name)|psi-mi:ARRB1(display_short)|uniprotkb:ARR1(gene name synonym)|uniprotkb:Non-visual arrestin-2(gene name synonym) psi-mi:a0a0s2z594_human(display_long)|uniprotkb:GNMT(gene name)|psi-mi:GNMT(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467801 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004032.2|refseq:NP_064647.1|ensembl:ENSG00000137486(gene)|ensembl:ENST00000420843(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000785"(chromatin)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0000187"(obsolete activation of MAPK activity)|go:"GO:0001933"(negative regulation of protein phosphorylation)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002031"(G protein-coupled receptor internalization)|go:"GO:0002092"(positive regulation of receptor internalization)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004857"(enzyme inhibitor activity)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005159"(insulin-like growth factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005768"(endosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015031"(protein transport)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016604"(nuclear body)|go:"GO:0016573"(histone acetylation)|go:"GO:0030331"(estrogen receptor binding)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031143"(pseudopodium)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031691"(alpha-1A adrenergic receptor binding)|go:"GO:0031692"(alpha-1B adrenergic receptor binding)|go:"GO:0031701"(angiotensin receptor binding)|go:"GO:0031762"(follicle-stimulating hormone receptor binding)|go:"GO:0031896"(V2 vasopressin receptor binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0032715"(negative regulation of interleukin-6 production)|go:"GO:0032717"(negative regulation of interleukin-8 production)|go:"GO:0034260"(negative regulation of GTPase activity)|go:"GO:0034393"(positive regulation of smooth muscle cell apoptotic process)|go:"GO:0035025"(positive regulation of Rho protein signal transduction)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0035612"(AP-2 adaptor complex binding)|go:"GO:0035615"(clathrin adaptor activity)|go:"GO:0042493"|go:"GO:0042699"(follicle-stimulating hormone signaling pathway)|go:"GO:0043149"(stress fiber assembly)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043197"(dendritic spine)|go:"GO:0043280"(positive regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0045309"(protein phosphorylated amino acid binding)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:0090240"(positive regulation of histone H4 acetylation)|go:"GO:1990763"(arrestin family protein binding)|interpro:IPR000698(Arrestin)|interpro:IPR011021(Arrestin-like, N-terminal)|interpro:IPR011022(Arrestin-like, C-terminal)|interpro:IPR014752(Arrestin, C-terminal)|interpro:IPR014753(Arrestin, N-terminal)|interpro:IPR014756(Immunoglobulin E-set)|interpro:IPR017864|mint:P49407|rcsb pdb:2IV8|rcsb pdb:6PWC|rcsb pdb:6TKO|rcsb pdb:6UP7|reactome:R-HSA-2122948|reactome:R-HSA-418555|reactome:R-HSA-432720|reactome:R-HSA-432722|reactome:R-HSA-456926|reactome:R-HSA-5635838|reactome:R-HSA-5674135|reactome:R-HSA-5689880|reactome:R-HSA-6802946|reactome:R-HSA-6802948|reactome:R-HSA-6802952|reactome:R-HSA-6802955|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-9649948|reactome:R-HSA-9656223|dip:DIP-29979N|entrezgene/locuslink:408(identity) interpro:IPR041698|go:"GO:0017174"(glycine N-methyltransferase activity)|go:"GO:0032259"(methylation)|interpro:IPR014369(Glycine N-methyltransferase)|interpro:IPR029063|entrezgene/locuslink:27232(identity) intact:EBI-16434180(see-also) - - comment:"Evidence for isoform CCSB isoform ID: GNMT_4 expression is provided in figureS2H."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UNYbZY5saRx8CwJ8Jwt3QtjXgj09606 rogid:ZSlpNMZa5lzAcw3yv60jmgcjt3Y9606 rigid:2WNPXbVX5T+HAHqOJux1Jv3PGkc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14749 uniprotkb:A0A0S2Z594 intact:EBI-744239|uniprotkb:Q9NNZ1|uniprotkb:Q9NS24|uniprotkb:Q5T8W2|ensembl:ENSP00000361894 intact:EBI-16467798 psi-mi:gnmt_human(display_long)|uniprotkb:GNMT(gene name)|psi-mi:GNMT(display_short) psi-mi:a0a0s2z594_human(display_long)|uniprotkb:GNMT(gene name)|psi-mi:GNMT(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467817 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_061833.1|refseq:NP_001305794.1|ensembl:ENSG00000124713(gene)|ensembl:ENST00000372808(transcript)|go:"GO:0005542"(folic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0006111"(regulation of gluconeogenesis)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006555"(methionine metabolic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0016594"(glycine binding)|go:"GO:0017174"(glycine N-methyltransferase activity)|go:"GO:0032259"(methylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0046498"(S-adenosylhomocysteine metabolic process)|go:"GO:0046500"(S-adenosylmethionine metabolic process)|go:"GO:0051289"(protein homotetramerization)|go:"GO:1901052"(sarcosine metabolic process)|go:"GO:1904047"(S-adenosyl-L-methionine binding)|interpro:IPR014369(Glycine N-methyltransferase)|interpro:IPR029063|interpro:IPR041698|rcsb pdb:1R74|rcsb pdb:2AZT|reactome:R-HSA-2408508|reactome:R-HSA-389661|entrezgene/locuslink:27232(identity) interpro:IPR041698|go:"GO:0017174"(glycine N-methyltransferase activity)|go:"GO:0032259"(methylation)|interpro:IPR014369(Glycine N-methyltransferase)|interpro:IPR029063|entrezgene/locuslink:27232(identity) intact:EBI-16440972(see-also)|intact:EBI-16440990(see-also) - - comment:"Evidence for isoform CCSB isoform ID: GNMT_4 expression is provided in figureS2H."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:noj0nCgjJ1Dq079ycrwAu30a4AU9606 rogid:ZSlpNMZa5lzAcw3yv60jmgcjt3Y9606 rigid:JYTJqL24YSNOjE9kRFD3CkdMOxk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:A0A0S2Z4Q4 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-16429135 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467853 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16433353(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:8k3uD5Pywqm2uWZisXqdSyH3Uss true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYM8 uniprotkb:O14964 intact:EBI-2340624|uniprotkb:O95623|uniprotkb:Q9BYM9|uniprotkb:Q96BS3|uniprotkb:Q86SL2|ensembl:ENSP00000348632 intact:EBI-740220|uniprotkb:Q9NR36|ensembl:ENSP00000331201|ensembl:ENSP00000504106 psi-mi:hoil1_human(display_long)|uniprotkb:RBCK1(gene name)|psi-mi:RBCK1(display_short)|uniprotkb:C20orf18(gene name synonym)|uniprotkb:RNF54(gene name synonym)|uniprotkb:UBCE7IP3(gene name synonym)|uniprotkb:XAP3(gene name synonym)|uniprotkb:XAP4(gene name synonym)|uniprotkb:Ubiquitin-conjugating enzyme 7-interacting protein 3(gene name synonym)|uniprotkb:Hepatitis B virus X-associated protein 4(gene name synonym)|uniprotkb:HBV-associated factor 4(gene name synonym)|uniprotkb:RING finger protein 54(gene name synonym)|uniprotkb:Heme-oxidized IRP2 ubiquitin ligase 1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase HOIL-1(gene name synonym) psi-mi:hgs_human(display_long)|uniprotkb:Protein pp110(gene name synonym)|uniprotkb:Hrs(gene name synonym)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short)|uniprotkb:HRS(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467869 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006453.1|refseq:NP_112506.2|ensembl:ENSG00000125826(gene)|ensembl:ENST00000356286(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005829"(cytosol)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0046872"(metal ion binding)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051220"(cytoplasmic sequestering of protein)|go:"GO:0060546"(negative regulation of necroptotic process)|go:"GO:0071797"(LUBAC complex)|go:"GO:0097039"(protein linear polyubiquitination)|go:"GO:0140311"(protein sequestering activity)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|interpro:IPR000626(Ubiquitin)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR002867(Zinc finger, C6HC-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR026261|interpro:IPR027370|interpro:IPR029071|interpro:IPR036443|interpro:IPR044066|mint:Q9BYM8|rcsb pdb:2CRC|rcsb pdb:2LGY|rcsb pdb:4DBG|reactome:R-HSA-5357905|reactome:R-HSA-5357956|reactome:R-HSA-983168|dip:DIP-47737N|entrezgene/locuslink:10616(identity) refseq:NP_004703.1|dip:DIP-29050N|ensembl:ENSG00000185359(gene)|ensembl:ENST00000329138(transcript)|ensembl:ENST00000676546(transcript)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0007165"(signal transduction)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010324"(membrane invagination)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0016197"(endosomal transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030948"(negative regulation of vascular endothelial growth factor receptor signaling pathway)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033565"(ESCRT-0 complex)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0042176"(regulation of protein catabolic process)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043405"(regulation of MAP kinase activity)|go:"GO:0044389"(ubiquitin-like protein ligase binding)|go:"GO:0046426"(negative regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0097013"(phagocytic vesicle lumen)|go:"GO:1903543"(positive regulation of exosomal secretion)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR002014(VHS)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR008942(ENTH/VHS)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR024641|mint:O14964|rcsb pdb:2D3G|rcsb pdb:3F1I|rcsb pdb:3OBQ|rcsb pdb:3ZYQ|rcsb pdb:4AVX|reactome:R-HSA-182971|reactome:R-HSA-432720|reactome:R-HSA-5689880|reactome:R-HSA-6807004|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-8875360|reactome:R-HSA-9013420|reactome:R-HSA-917729|reactome:R-HSA-9635644|reactome:R-HSA-9636383|reactome:R-HSA-9706019|entrezgene/locuslink:9146(identity) intact:EBI-16433452(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:TrkfR++u4X4c/KzUlC5Mcu6SgVs9606 rogid:z/AnREuqEpyJ9/Zj6JFCJCJem1I9606 rigid:Z0mzCZAg9K8CUJJB74SEBYnhugY true sufficient binding region:11-510 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HD26-2 uniprotkb:Q8WVV9 intact:EBI-11102276|ensembl:ENSP00000052569 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q9hd26-2(display_long)|uniprotkb:GOPC(gene name)|psi-mi:GOPC(display_short)|uniprotkb:CAL(gene name synonym)|uniprotkb:CFTR-associated ligand(gene name synonym)|uniprotkb:FIG(gene name synonym)|uniprotkb:Fused in glioblastoma(gene name synonym)|uniprotkb:PDZ protein interacting specifically with TC10(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468261 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000047932(gene)|ensembl:ENST00000052569(transcript)|intact:EBI-349832(isoform-parent)|uniprotkb:Q9HD26-2(isoform-parent)|entrezgene/locuslink:57120(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430618(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:QoEGY54FfmwTrpGVMQN9ASGPgVI9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:kGjltN2MVv03cF1uqLykBg3V5Aw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q05519-2 uniprotkb:A0A0S2Z5U3 intact:EBI-11975029|ensembl:ENSP00000359989 intact:EBI-16468000 psi-mi:q05519-2(display_long)|uniprotkb:SRSF11(gene name)|psi-mi:SRSF11(display_short)|uniprotkb:Arginine-rich 54 kDa nuclear protein(gene name synonym)|uniprotkb:SFRS11(gene name synonym)|uniprotkb:Splicing factor, arginine/serine-rich 11(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468181 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q05519-2(isoform-parent)|intact:EBI-1051785(isoform-parent)|ensembl:ENSG00000116754(gene)|ensembl:ENST00000370951(transcript)|entrezgene/locuslink:9295(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430291(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:jNkAVUlnfT59fvbzTBQJUfR7lxY9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:4AiLxzgWVls10+YcOD1fg0n9uFY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-10177480 uniprotkb:A0A0S2Z5U3 - intact:EBI-16468000 psi-mi:clone_11897(display_short)|psi-mi:EBI-10177480(display_long)|uniprotkb:Cerebral protein 11(gene name synonym)|uniprotkb:KIAA0481(gene name synonym)|uniprotkb:hucep-11(orf name)|uniprotkb:TMCC2(gene name)|psi-mi:TMCC2(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468245 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:O75069-4(see-also)|intact:EBI-12696212(see-also)|intact:EBI-726731(see-also)|entrezgene/locuslink:9911(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430482(see-also) no-uniprot-update:|caution:The sequence has been withdrawn from uniprot. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/22 rogid:hIJ1KAUaIyjszZvvmcTXV6Nox8o9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:taV4yOTGqu/l3SW3S1dG/UyjoJg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-10177480 uniprotkb:Q8WVV9 - intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:clone_11897(display_short)|psi-mi:EBI-10177480(display_long)|uniprotkb:Cerebral protein 11(gene name synonym)|uniprotkb:KIAA0481(gene name synonym)|uniprotkb:hucep-11(orf name)|uniprotkb:TMCC2(gene name)|psi-mi:TMCC2(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468229 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:O75069-4(see-also)|intact:EBI-12696212(see-also)|intact:EBI-726731(see-also)|entrezgene/locuslink:9911(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430482(see-also) no-uniprot-update:|caution:The sequence has been withdrawn from uniprot. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/22 rogid:hIJ1KAUaIyjszZvvmcTXV6Nox8o9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:Y5FiPLiIWcjo4UtXHLf/Fscbcqk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VWX1 uniprotkb:A0A0S2Z5U3 intact:EBI-742808|uniprotkb:Q8TCZ4|uniprotkb:Q8N4I4|uniprotkb:A8K7M8|ensembl:ENSP00000281156 intact:EBI-16468000 psi-mi:khdr2_human(display_long)|uniprotkb:SLM1(gene name synonym)|uniprotkb:Sam68-like mammalian protein 1(gene name synonym)|uniprotkb:KHDRBS2(gene name)|psi-mi:KHDRBS2(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468213 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_689901.2|ensembl:ENSG00000112232(gene)|ensembl:ENST00000281156(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0017124"(SH3 domain binding)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|reactome:R-HSA-8849468|entrezgene/locuslink:202559(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430321(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:IfFvZO2dIAo0Sdx+BUb5c8F7aQY9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:AMMpyTpv9rdO35EP/DHt2T5v50A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VWX1 uniprotkb:Q8WVV9 intact:EBI-742808|uniprotkb:Q8TCZ4|uniprotkb:Q8N4I4|uniprotkb:A8K7M8|ensembl:ENSP00000281156 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:khdr2_human(display_long)|uniprotkb:SLM1(gene name synonym)|uniprotkb:Sam68-like mammalian protein 1(gene name synonym)|uniprotkb:KHDRBS2(gene name)|psi-mi:KHDRBS2(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468197 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_689901.2|ensembl:ENSG00000112232(gene)|ensembl:ENST00000281156(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0017124"(SH3 domain binding)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|reactome:R-HSA-8849468|entrezgene/locuslink:202559(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430321(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:IfFvZO2dIAo0Sdx+BUb5c8F7aQY9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:9JNd1rehkJDXrrhJ17mDDGcKbMM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z5U3 - intact:EBI-16468000 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468309 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430630(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:jAmvjM4nVl1VmNGE/PwQxF+MT3c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:Q8WVV9 - intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468293 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430630(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:puQ79Hiivev1ih6wdghxHul/fNE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478-2 uniprotkb:A0A0S2Z4Q4 intact:EBI-16433586|ensembl:ENSP00000487973 intact:EBI-16429135 psi-mi:o75478-2(display_long)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467888 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000277104(gene)|ensembl:ENST00000633584(transcript)|intact:EBI-742268(isoform-parent)|uniprotkb:O75478-2(isoform-parent)|entrezgene/locuslink:6871(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16433593(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JHWBurvcalqBr39eeJPqONrU9GM9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:uFKRuFxYi01Y3VOA7YXm8lp+n3g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95751 uniprotkb:A0A0S2Z4Q4 intact:EBI-740738|ensembl:ENSP00000359557|uniprotkb:Q6IAR6 intact:EBI-16429135 psi-mi:ldoc1_human(display_long)|uniprotkb:Leucine zipper protein down-regulated in cancer cells(gene name synonym)|uniprotkb:LDOC1(gene name)|psi-mi:LDOC1(display_short)|uniprotkb:BCUR1(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467904 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036449.1|ensembl:ENSG00000182195(gene)|ensembl:ENST00000370526(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071225"(cellular response to muramyl dipeptide)|interpro:IPR032549|interpro:IPR032567|entrezgene/locuslink:23641(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16433603(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Ediu0oNiZ/+YVY8l3fNdgP5A+v09606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:WHrWwh7FiczVvwI6zrwt2IPvSUA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14525 uniprotkb:A0A0S2Z4Q4 intact:EBI-1049638|uniprotkb:O76010|ensembl:ENSP00000251646|ensembl:ENSP00000459509 intact:EBI-16429135 psi-mi:kt33b_human(display_long)|uniprotkb:KRTHA3B(gene name synonym)|uniprotkb:Hair keratin, type I Ha3-II(gene name synonym)|uniprotkb:Keratin-33B(gene name synonym)|uniprotkb:KRT33B(gene name)|psi-mi:KRT33B(display_short)|uniprotkb:HHA3-II(gene name synonym)|uniprotkb:HKA3B(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467920 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002270.1|ensembl:ENSG00000131738(gene)|ensembl:ENSG00000263012(gene)|ensembl:ENST00000251646(transcript)|ensembl:ENST00000570596(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0007568"(aging)|go:"GO:0042633"(hair cycle)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|mint:Q14525|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3884(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16437963(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:TDqltAJBdpwMGaQsl0Lznc8Y7Ns9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:iTmUFxCpN+QYKWQHSszaOTC29QM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96HW7-2 uniprotkb:A0A0S2Z4Q4 intact:EBI-16438029|ensembl:ENSP00000433644 intact:EBI-16429135 psi-mi:q96hw7-2(display_long)|uniprotkb:INTS4(gene name)|psi-mi:INTS4(display_short)|uniprotkb:MSTP093(orf name) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467936 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-5663129(isoform-parent)|ensembl:ENSG00000149262(gene)|ensembl:ENST00000529807(transcript)|entrezgene/locuslink:92105(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16438035(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:NDpAzVmN+obi0a3tSH56T4uc2UM9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:wQcqYNc2k+/uf/q4XzMBRgqh8r0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96MT8-3 uniprotkb:A0A0S2Z4Q4 intact:EBI-11522539|ensembl:ENSP00000507703|ensembl:ENSP00000328382|ensembl:ENSP00000506728|ensembl:ENSP00000506791|ensembl:ENSP00000506828|ensembl:ENSP00000507228 intact:EBI-16429135 psi-mi:q96mt8-3(display_long)|uniprotkb:CEP63(gene name)|psi-mi:CEP63(display_short) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467952 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-741977(isoform-parent)|ensembl:ENST00000332047(transcript)|ensembl:ENST00000682042(transcript)|ensembl:ENST00000682800(transcript)|ensembl:ENST00000682858(transcript)|ensembl:ENST00000683177(transcript)|ensembl:ENST00000683861(transcript)|ensembl:ENSG00000182923(gene)|uniprotkb:Q96MT8-3(isoform-parent)|entrezgene/locuslink:80254(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16438121(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:U0uvVcOCzA8Qp2cCB0ilixgd4Yc9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:3vrh/6mkb2kr3zGZnXJUEFa8+ug true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:A0A0S2Z4Q4 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-16429135 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467968 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16439819(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:iRxgkJfqsteoQL1YZwOGUSBtMXs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y577 uniprotkb:A0A0S2Z4Q4 intact:EBI-743894|uniprotkb:B4DVJ2|uniprotkb:Q5VST8|ensembl:ENSP00000295033|ensembl:ENSP00000355658|ensembl:ENSP00000355659|ensembl:ENSP00000493891|ensembl:ENSP00000495842|ensembl:ENSP00000496098 intact:EBI-16429135 psi-mi:tri17_human(display_long)|uniprotkb:Testis RING finger protein(gene name synonym)|uniprotkb:RING finger protein 16(gene name synonym)|uniprotkb:TRIM17(gene name)|psi-mi:TRIM17(display_short)|uniprotkb:RBCC(gene name synonym)|uniprotkb:RNF16(gene name synonym)|uniprotkb:TERF(gene name synonym)|uniprotkb:Tripartite motif-containing protein 17(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM17(gene name synonym) psi-mi:a0a0s2z4q4_human(display_long)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16467984 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162931(gene)|ensembl:ENSG00000285344(gene)|refseq:NP_001020111.1|refseq:NP_001128327.1|refseq:NP_057186.1|refseq:XP_011542511.1|refseq:XP_011542512.1|refseq:XP_006711842.1|ensembl:ENST00000295033(transcript)|ensembl:ENST00000366697(transcript)|ensembl:ENST00000366698(transcript)|ensembl:ENST00000645562(transcript)|ensembl:ENST00000645958(transcript)|ensembl:ENST00000647385(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006914"(autophagy)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0045087"(innate immune response)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR027370|interpro:IPR032918|interpro:IPR035687|interpro:IPR043136|reactome:R-HSA-877300|entrezgene/locuslink:51127(identity) go:"GO:0016301"(kinase activity)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR008942(ENTH/VHS)|interpro:IPR024641|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR002014(VHS)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|entrezgene/locuslink:9146(identity) intact:EBI-16440922(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:pXiCDkeNMtq9icQduH4MSCM6vSQ9606 rogid:XhaP4mBwH/0sRF59j/8QutLXj+k9606 rigid:FN6B2ICEvGKQvUflEsOsIx+PV3c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UKT9 uniprotkb:A0A0S2Z5U3 intact:EBI-747204|uniprotkb:Q8WWQ9|uniprotkb:Q8WWR0|uniprotkb:Q8WWR1|uniprotkb:Q8WWR2|uniprotkb:Q8WWR3|uniprotkb:Q8N574|uniprotkb:B4DVV5|uniprotkb:Q69BL6|uniprotkb:Q69BL7|uniprotkb:Q69BL8|uniprotkb:Q69BL9|uniprotkb:Q69BM0|uniprotkb:Q69BM1|uniprotkb:Q69BM2|uniprotkb:Q69BM3|uniprotkb:Q69BM5|ensembl:ENSP00000344544 intact:EBI-16468000 psi-mi:ikzf3_human(display_long)|uniprotkb:ZNFN1A3(gene name synonym)|uniprotkb:Ikaros family zinc finger protein 3(gene name synonym)|uniprotkb:IKZF3(gene name)|psi-mi:IKZF3(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468015 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001271443.1|refseq:NP_001271444.1|refseq:NP_036613.2|refseq:NP_899051.1|refseq:NP_899052.1|refseq:NP_899053.1|refseq:NP_899054.1|refseq:NP_899055.1|refseq:NP_001271445.1|refseq:NP_001244337.1|refseq:NP_001244338.1|refseq:NP_001244339.1|refseq:NP_001244340.1|refseq:NP_001244341.1|refseq:NP_001244342.1|refseq:NP_001244343.1|ensembl:ENSG00000161405(gene)|ensembl:ENST00000346872(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0009617"(response to bacterium)|go:"GO:0030888"(regulation of B cell proliferation)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045577"(regulation of B cell differentiation)|go:"GO:0045619"(regulation of lymphocyte differentiation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|go:"GO:0046872"(metal ion binding)|dip:DIP-56975N|entrezgene/locuslink:22806(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16428940(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2Kp6LefSLfK5VIiE6DmQusFIfMY9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:C3+DAP61qWkmsKW7qdEia5E3PP4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:Q8WVV9 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468031 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16429161(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:yQrmAXR0+cabf1LbAvJ9XPbEuEA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:A0A0S2Z5U3 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-16468000 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468047 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16429161(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:mgHL3AZ8JlVKhDrFW4hFKutdwFU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:Q8WVV9 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468063 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16429456(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:MBygL8ZauycaqUMbtiMqNNatzGg true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:A0A0S2Z5U3 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-16468000 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468082 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16429456(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:yZy0KIvqvkVjOwiijlWFnVPgnYM true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P12757 uniprotkb:Q8WVV9 intact:EBI-2902468|uniprotkb:A6NGT1|uniprotkb:O00464|uniprotkb:P12756|uniprotkb:Q07501|uniprotkb:B4DT50|ensembl:ENSP00000259119|ensembl:ENSP00000415243 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:skil_human(display_long)|uniprotkb:SKIL(gene name)|psi-mi:SKIL(display_short)|uniprotkb:SNO(gene name synonym)|uniprotkb:Ski-related protein(gene name synonym)|uniprotkb:Ski-related oncogene(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468101 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001138569.1|refseq:NP_001138570.1|refseq:NP_005405.2|refseq:NP_001234937.1|refseq:XP_005247778.1|ensembl:ENSG00000136603(gene)|ensembl:ENST00000259119(transcript)|ensembl:ENST00000458537(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001825"(blastocyst formation)|go:"GO:0002260"(lymphocyte homeostasis)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0016605"(PML body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030514"(negative regulation of BMP signaling pathway)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034097"(response to cytokine)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045596"(negative regulation of cell differentiation)|go:"GO:0046332"(SMAD binding)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070306"(lens fiber cell differentiation)|go:"GO:0070848"(response to growth factor)|go:"GO:1902043"(positive regulation of extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:1902231"(positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage)|interpro:IPR003380(Transforming protein Ski)|interpro:IPR009061(Putative DNA binding)|interpro:IPR010919(SAND-like)|interpro:IPR014890(c-SKI Smad4 binding)|interpro:IPR023216|interpro:IPR028373|interpro:IPR037000|rcsb pdb:3EQ5|rcsb pdb:5C4V|reactome:R-HSA-2173795|refseq:XP_006713798.1|dip:DIP-42138N|entrezgene/locuslink:6498(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16429642(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CktHHQJKOG+DaY5zwy1U+2YeTmw9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:r6fHbN0gYd+dtTJnxocgCeAez9I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P12757 uniprotkb:A0A0S2Z5U3 intact:EBI-2902468|uniprotkb:A6NGT1|uniprotkb:O00464|uniprotkb:P12756|uniprotkb:Q07501|uniprotkb:B4DT50|ensembl:ENSP00000259119|ensembl:ENSP00000415243 intact:EBI-16468000 psi-mi:skil_human(display_long)|uniprotkb:SKIL(gene name)|psi-mi:SKIL(display_short)|uniprotkb:SNO(gene name synonym)|uniprotkb:Ski-related protein(gene name synonym)|uniprotkb:Ski-related oncogene(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468117 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001138569.1|refseq:NP_001138570.1|refseq:NP_005405.2|refseq:NP_001234937.1|refseq:XP_005247778.1|ensembl:ENSG00000136603(gene)|ensembl:ENST00000259119(transcript)|ensembl:ENST00000458537(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001825"(blastocyst formation)|go:"GO:0002260"(lymphocyte homeostasis)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0016605"(PML body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030514"(negative regulation of BMP signaling pathway)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034097"(response to cytokine)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045596"(negative regulation of cell differentiation)|go:"GO:0046332"(SMAD binding)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070306"(lens fiber cell differentiation)|go:"GO:0070848"(response to growth factor)|go:"GO:1902043"(positive regulation of extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:1902231"(positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage)|interpro:IPR003380(Transforming protein Ski)|interpro:IPR009061(Putative DNA binding)|interpro:IPR010919(SAND-like)|interpro:IPR014890(c-SKI Smad4 binding)|interpro:IPR023216|interpro:IPR028373|interpro:IPR037000|rcsb pdb:3EQ5|rcsb pdb:5C4V|reactome:R-HSA-2173795|refseq:XP_006713798.1|dip:DIP-42138N|entrezgene/locuslink:6498(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16429642(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CktHHQJKOG+DaY5zwy1U+2YeTmw9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:o0PM1nakqNixz9cifbKHx9Tj/Zg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:Q8WVV9 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468133 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16429927(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:IF2wLf8qhyWMxYoj7vQplA0BgTI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z5U3 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16468000 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468149 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16429927(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:neNI/e6ct3YS3jVzT6XWIQyDcdA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q05519-2 uniprotkb:Q8WVV9 intact:EBI-11975029|ensembl:ENSP00000359989 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q05519-2(display_long)|uniprotkb:SRSF11(gene name)|psi-mi:SRSF11(display_short)|uniprotkb:Arginine-rich 54 kDa nuclear protein(gene name synonym)|uniprotkb:SFRS11(gene name synonym)|uniprotkb:Splicing factor, arginine/serine-rich 11(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468165 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q05519-2(isoform-parent)|intact:EBI-1051785(isoform-parent)|ensembl:ENSG00000116754(gene)|ensembl:ENST00000370951(transcript)|entrezgene/locuslink:9295(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430291(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:jNkAVUlnfT59fvbzTBQJUfR7lxY9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:BjXLWChezvd/7cAA1Pixi4rMixA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HD26-2 uniprotkb:A0A0S2Z5U3 intact:EBI-11102276|ensembl:ENSP00000052569 intact:EBI-16468000 psi-mi:q9hd26-2(display_long)|uniprotkb:GOPC(gene name)|psi-mi:GOPC(display_short)|uniprotkb:CAL(gene name synonym)|uniprotkb:CFTR-associated ligand(gene name synonym)|uniprotkb:FIG(gene name synonym)|uniprotkb:Fused in glioblastoma(gene name synonym)|uniprotkb:PDZ protein interacting specifically with TC10(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468277 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000047932(gene)|ensembl:ENST00000052569(transcript)|intact:EBI-349832(isoform-parent)|uniprotkb:Q9HD26-2(isoform-parent)|entrezgene/locuslink:57120(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430618(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:QoEGY54FfmwTrpGVMQN9ASGPgVI9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:dY/uU8Z314KZ5VUZ1icJ+TKFvyY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N9N5-2 uniprotkb:A0A0S2Z5U3 intact:EBI-11524452|ensembl:ENSP00000347125 intact:EBI-16468000 psi-mi:q8n9n5-2(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short)|uniprotkb:BEN domain-containing protein 1(gene name synonym)|uniprotkb:BEND1(gene name synonym)|uniprotkb:Btg3-associated nuclear protein(gene name synonym)|uniprotkb:SMAR1(gene name synonym)|uniprotkb:Scaffold/matrix-associated region-1-binding protein(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468905 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000172530(gene)|ensembl:ENST00000355022(transcript)|intact:EBI-744695(isoform-parent)|uniprotkb:Q8N9N5-2(isoform-parent)|entrezgene/locuslink:54971(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16437783(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ESe6iCAhvq+i57fQHz3rGyg6UOo9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:/Bv7AVHjU5B2AaXT8/yW148GWZI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N9N5-2 uniprotkb:Q8WVV9 intact:EBI-11524452|ensembl:ENSP00000347125 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q8n9n5-2(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short)|uniprotkb:BEN domain-containing protein 1(gene name synonym)|uniprotkb:BEND1(gene name synonym)|uniprotkb:Btg3-associated nuclear protein(gene name synonym)|uniprotkb:SMAR1(gene name synonym)|uniprotkb:Scaffold/matrix-associated region-1-binding protein(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468889 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000172530(gene)|ensembl:ENST00000355022(transcript)|intact:EBI-744695(isoform-parent)|uniprotkb:Q8N9N5-2(isoform-parent)|entrezgene/locuslink:54971(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16437783(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ESe6iCAhvq+i57fQHz3rGyg6UOo9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:5ySNBJRGIAb8rGX7jYnr6qDFFvA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:A0A0S2Z5U3 - intact:EBI-16468000 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468873 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16437039(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:PQ+QADIonnpKZ0gCIaZndEbUpEk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:Q8WVV9 - intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468857 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16437039(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:vgNMG+uKo1MZ8xR04No929MiU5w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:A0A0S2Z5U3 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-16468000 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468841 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16436987(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:KEjQcBgeCQrp2HhZ7aNl785Noy8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:Q8WVV9 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468825 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16436987(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:4lmEAxuhH+R1cx+BJ4y3YRzHN90 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IZU0 uniprotkb:A0A0S2Z5U3 intact:EBI-10175124|uniprotkb:Q8N7Z8|uniprotkb:Q0IJ68|ensembl:ENSP00000318716|ensembl:ENSP00000412606|ensembl:ENSP00000431456|ensembl:ENSP00000498495 intact:EBI-16468000 psi-mi:fam9b_human(display_long)|uniprotkb:FAM9B(gene name)|psi-mi:FAM9B(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468809 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_995321.1|refseq:XP_011543766.1|ensembl:ENSG00000177138(gene)|ensembl:ENST00000327220(transcript)|ensembl:ENST00000428477(transcript)|ensembl:ENST00000472522(transcript)|ensembl:ENST00000651278(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR006888(Cor1/Xlr/Xmr conserved region)|entrezgene/locuslink:171483(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16436779(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tEJbrpO7KWcw7izp1VJ+5q6Xces9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:09w7q405In8KRnkaYV68il1z010 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IZU0 uniprotkb:Q8WVV9 intact:EBI-10175124|uniprotkb:Q8N7Z8|uniprotkb:Q0IJ68|ensembl:ENSP00000318716|ensembl:ENSP00000412606|ensembl:ENSP00000431456|ensembl:ENSP00000498495 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:fam9b_human(display_long)|uniprotkb:FAM9B(gene name)|psi-mi:FAM9B(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468793 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_995321.1|refseq:XP_011543766.1|ensembl:ENSG00000177138(gene)|ensembl:ENST00000327220(transcript)|ensembl:ENST00000428477(transcript)|ensembl:ENST00000472522(transcript)|ensembl:ENST00000651278(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007286"(spermatid development)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR006888(Cor1/Xlr/Xmr conserved region)|entrezgene/locuslink:171483(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16436779(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tEJbrpO7KWcw7izp1VJ+5q6Xces9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:1AlS2kOi8iFHCW/E2SJML65Vnl4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15323 uniprotkb:A0A0S2Z5U3 intact:EBI-948001|uniprotkb:Q9UE12|ensembl:ENSP00000251645|ensembl:ENSP00000460739 intact:EBI-16468000 psi-mi:k1h1_human(display_long)|uniprotkb:Hair keratin, type I Ha1(gene name synonym)|uniprotkb:Keratin-31(gene name synonym)|uniprotkb:KRT31(gene name)|psi-mi:KRT31(display_short)|uniprotkb:HHA1(gene name synonym)|uniprotkb:HKA1(gene name synonym)|uniprotkb:KRTHA1(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468777 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002268.2|ensembl:ENSG00000094796(gene)|ensembl:ENSG00000262993(gene)|ensembl:ENST00000251645(transcript)|ensembl:ENST00000573281(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3881(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16436615(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ur97LEvtqaqu3wh7iaX4HhN163k9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:HGdGLl/dTfIGqF+O82zHZx2o7hQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15323 uniprotkb:Q8WVV9 intact:EBI-948001|uniprotkb:Q9UE12|ensembl:ENSP00000251645|ensembl:ENSP00000460739 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:k1h1_human(display_long)|uniprotkb:Hair keratin, type I Ha1(gene name synonym)|uniprotkb:Keratin-31(gene name synonym)|uniprotkb:KRT31(gene name)|psi-mi:KRT31(display_short)|uniprotkb:HHA1(gene name synonym)|uniprotkb:HKA1(gene name synonym)|uniprotkb:KRTHA1(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468761 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002268.2|ensembl:ENSG00000094796(gene)|ensembl:ENSG00000262993(gene)|ensembl:ENST00000251645(transcript)|ensembl:ENST00000573281(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3881(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16436615(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ur97LEvtqaqu3wh7iaX4HhN163k9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:VxPytE6UZRhjO0DKz44TlKx37og true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:A0A0S2Z5U3 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-16468000 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468745 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16436051(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:Zz9b0BZXfncU87N4Z4kLLYiPNYI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:Q8WVV9 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468729 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16436051(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:7/a/HrIlQeAI38isVUxefihNbVc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:A0A0S2Z5U3 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-16468000 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468713 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16435758(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:Du5HIzuPqEj05euUqs/tA1pZIxc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08117-2 uniprotkb:A0A0S2Z5U3 intact:EBI-11741437|ensembl:ENSP00000221561 intact:EBI-16468000 psi-mi:q08117-2(display_long)|uniprotkb:TLE5(gene name)|psi-mi:TLE5(display_short)|uniprotkb:AES(gene name synonym)|uniprotkb:Amino-terminal enhancer of split(gene name synonym)|uniprotkb:GRG(gene name synonym)|uniprotkb:GRG5(gene name synonym)|uniprotkb:Gp130-associated protein GAM(gene name synonym)|uniprotkb:Grg-5(gene name synonym)|uniprotkb:Groucho-related protein 5(gene name synonym)|uniprotkb:Protein ESP1(gene name synonym)|uniprotkb:Protein GRG(gene name synonym)|uniprotkb:TLE family member 5, transcriptional modulator(gene name synonym)|uniprotkb:AES-2(isoform synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468697 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000104964(gene)|ensembl:ENST00000221561(transcript)|uniprotkb:Q08117-2(isoform-parent)|intact:EBI-717810(isoform-parent)|entrezgene/locuslink:166(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16435628(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nrb311r8NRqcGyEJkPxvyjbpt6E9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:IJ6UpnDNCdRzcy9Yh1cP9h0BkpY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08117-2 uniprotkb:Q8WVV9 intact:EBI-11741437|ensembl:ENSP00000221561 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q08117-2(display_long)|uniprotkb:TLE5(gene name)|psi-mi:TLE5(display_short)|uniprotkb:AES(gene name synonym)|uniprotkb:Amino-terminal enhancer of split(gene name synonym)|uniprotkb:GRG(gene name synonym)|uniprotkb:GRG5(gene name synonym)|uniprotkb:Gp130-associated protein GAM(gene name synonym)|uniprotkb:Grg-5(gene name synonym)|uniprotkb:Groucho-related protein 5(gene name synonym)|uniprotkb:Protein ESP1(gene name synonym)|uniprotkb:Protein GRG(gene name synonym)|uniprotkb:TLE family member 5, transcriptional modulator(gene name synonym)|uniprotkb:AES-2(isoform synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468681 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000104964(gene)|ensembl:ENST00000221561(transcript)|uniprotkb:Q08117-2(isoform-parent)|intact:EBI-717810(isoform-parent)|entrezgene/locuslink:166(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16435628(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nrb311r8NRqcGyEJkPxvyjbpt6E9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:v24Xsp7Z75x5+AYMm7AMmWzc+GU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:A0A0S2Z5U3 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-16468000 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468665 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16435122(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:DAMlqINnTPTpv6NKqJxS98MnPS8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:Q8WVV9 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468649 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16435122(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:FyI9KSjpY7b+U+M4xOLwYRbJ2xA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978-2 uniprotkb:A0A0S2Z5U3 intact:EBI-7060731|ensembl:ENSP00000365439|ensembl:ENSP00000365458|uniprotkb:Q07244-2|intact:MINT-225449 intact:EBI-16468000 psi-mi:p61978-2(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468632 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|ensembl:ENST00000376263(transcript)|ensembl:ENST00000376281(transcript)|intact:EBI-304185(isoform-parent)|uniprotkb:P61978-2(isoform-parent)|entrezgene/locuslink:3190(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16434768(see-also)|intact:EBI-16434778(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FX/iS2YfOhD0ntY2oqpOUetACqg9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:rzNpHAo4KZdPN17UNQJT9LJaXRs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13838 uniprotkb:A0A0S2Z5U3 intact:EBI-348622|uniprotkb:B0S8C0|uniprotkb:Q5STB8|uniprotkb:O43496|uniprotkb:Q0EFA1|uniprotkb:Q2L6F9|uniprotkb:Q53GL9|uniprotkb:Q5RJ64|uniprotkb:Q5RJ66|uniprotkb:Q5ST94|uniprotkb:Q5STB4|uniprotkb:Q5STB5|uniprotkb:Q5STB7|uniprotkb:Q5STU4|uniprotkb:Q5STU5|uniprotkb:Q5STU6|uniprotkb:Q5STU8|uniprotkb:Q71V76|ensembl:ENSP00000373000|ensembl:ENSP00000379475|ensembl:ENSP00000383151|ensembl:ENSP00000383152|ensembl:ENSP00000387994|ensembl:ENSP00000388880|ensembl:ENSP00000390999|ensembl:ENSP00000391463|ensembl:ENSP00000393712|ensembl:ENSP00000394160|ensembl:ENSP00000398775|ensembl:ENSP00000399030|ensembl:ENSP00000400326|ensembl:ENSP00000404695|ensembl:ENSP00000405560|ensembl:ENSP00000407419|ensembl:ENSP00000411136|ensembl:ENSP00000411853|ensembl:ENSP00000416269 intact:EBI-16468000 psi-mi:dx39b_human(display_long)|uniprotkb:UAP56(gene name synonym)|uniprotkb:DDX39B(gene name)|psi-mi:DDX39B(display_short)|uniprotkb:DEAD box protein UAP56(gene name synonym)|uniprotkb:56 kDa U2AF65-associated protein(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p47(gene name synonym)|uniprotkb:HLA-B-associated transcript 1 protein(gene name synonym)|uniprotkb:BAT1(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468616 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004631.1|refseq:NP_542165.1|ensembl:ENSG00000198563(gene)|ensembl:ENSG00000215425(gene)|ensembl:ENSG00000225073(gene)|ensembl:ENSG00000225859(gene)|ensembl:ENSG00000229496(gene)|ensembl:ENSG00000230624(gene)|ensembl:ENSG00000235439(gene)|ensembl:ENST00000383508(transcript)|ensembl:ENST00000396172(transcript)|ensembl:ENST00000400295(transcript)|ensembl:ENST00000400296(transcript)|ensembl:ENST00000412106(transcript)|ensembl:ENST00000412330(transcript)|ensembl:ENST00000413678(transcript)|ensembl:ENST00000414440(transcript)|ensembl:ENST00000415689(transcript)|ensembl:ENST00000416863(transcript)|ensembl:ENST00000430784(transcript)|ensembl:ENST00000431360(transcript)|ensembl:ENST00000441425(transcript)|ensembl:ENST00000445218(transcript)|ensembl:ENST00000448296(transcript)|ensembl:ENST00000453138(transcript)|ensembl:ENST00000456476(transcript)|ensembl:ENST00000456666(transcript)|ensembl:ENST00000458640(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000346"(transcription export complex)|go:"GO:0001889"(liver development)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0008380"(RNA splicing)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0061051"(positive regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904707"(positive regulation of vascular associated smooth muscle cell proliferation)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|go:"GO:2000573"(positive regulation of DNA biosynthetic process)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:Q13838|rcsb pdb:1T5I|rcsb pdb:1T6N|rcsb pdb:1XTI|rcsb pdb:1XTJ|rcsb pdb:1XTK|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|reactome:R-HSA-9013418|entrezgene/locuslink:7919(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16433809(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Cl/rf1oq31fZbLHC2foUXu9MBOE9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:Eh7uekCpI3ddTEjTraIG2XjUq70 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13838 uniprotkb:Q8WVV9 intact:EBI-348622|uniprotkb:B0S8C0|uniprotkb:Q5STB8|uniprotkb:O43496|uniprotkb:Q0EFA1|uniprotkb:Q2L6F9|uniprotkb:Q53GL9|uniprotkb:Q5RJ64|uniprotkb:Q5RJ66|uniprotkb:Q5ST94|uniprotkb:Q5STB4|uniprotkb:Q5STB5|uniprotkb:Q5STB7|uniprotkb:Q5STU4|uniprotkb:Q5STU5|uniprotkb:Q5STU6|uniprotkb:Q5STU8|uniprotkb:Q71V76|ensembl:ENSP00000373000|ensembl:ENSP00000379475|ensembl:ENSP00000383151|ensembl:ENSP00000383152|ensembl:ENSP00000387994|ensembl:ENSP00000388880|ensembl:ENSP00000390999|ensembl:ENSP00000391463|ensembl:ENSP00000393712|ensembl:ENSP00000394160|ensembl:ENSP00000398775|ensembl:ENSP00000399030|ensembl:ENSP00000400326|ensembl:ENSP00000404695|ensembl:ENSP00000405560|ensembl:ENSP00000407419|ensembl:ENSP00000411136|ensembl:ENSP00000411853|ensembl:ENSP00000416269 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:dx39b_human(display_long)|uniprotkb:UAP56(gene name synonym)|uniprotkb:DDX39B(gene name)|psi-mi:DDX39B(display_short)|uniprotkb:DEAD box protein UAP56(gene name synonym)|uniprotkb:56 kDa U2AF65-associated protein(gene name synonym)|uniprotkb:ATP-dependent RNA helicase p47(gene name synonym)|uniprotkb:HLA-B-associated transcript 1 protein(gene name synonym)|uniprotkb:BAT1(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468600 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004631.1|refseq:NP_542165.1|ensembl:ENSG00000198563(gene)|ensembl:ENSG00000215425(gene)|ensembl:ENSG00000225073(gene)|ensembl:ENSG00000225859(gene)|ensembl:ENSG00000229496(gene)|ensembl:ENSG00000230624(gene)|ensembl:ENSG00000235439(gene)|ensembl:ENST00000383508(transcript)|ensembl:ENST00000396172(transcript)|ensembl:ENST00000400295(transcript)|ensembl:ENST00000400296(transcript)|ensembl:ENST00000412106(transcript)|ensembl:ENST00000412330(transcript)|ensembl:ENST00000413678(transcript)|ensembl:ENST00000414440(transcript)|ensembl:ENST00000415689(transcript)|ensembl:ENST00000416863(transcript)|ensembl:ENST00000430784(transcript)|ensembl:ENST00000431360(transcript)|ensembl:ENST00000441425(transcript)|ensembl:ENST00000445218(transcript)|ensembl:ENST00000448296(transcript)|ensembl:ENST00000453138(transcript)|ensembl:ENST00000456476(transcript)|ensembl:ENST00000456666(transcript)|ensembl:ENST00000458640(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0000346"(transcription export complex)|go:"GO:0001889"(liver development)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005687"(U4 snRNP)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0008380"(RNA splicing)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016607"(nuclear speck)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0030621"(U4 snRNA binding)|go:"GO:0032786"(positive regulation of DNA-templated transcription, elongation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043008"(ATP-dependent protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046784"(viral mRNA export from host cell nucleus)|go:"GO:0061051"(positive regulation of cell growth involved in cardiac muscle cell development)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1904707"(positive regulation of vascular associated smooth muscle cell proliferation)|go:"GO:2000002"(negative regulation of DNA damage checkpoint)|go:"GO:2000573"(positive regulation of DNA biosynthetic process)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:Q13838|rcsb pdb:1T5I|rcsb pdb:1T6N|rcsb pdb:1XTI|rcsb pdb:1XTJ|rcsb pdb:1XTK|rcsb pdb:7APK|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|reactome:R-HSA-9013418|entrezgene/locuslink:7919(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16433809(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Cl/rf1oq31fZbLHC2foUXu9MBOE9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:CwITTwo/IdQaJ4Es/pPKgp0TPR4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P98175-4 uniprotkb:A0A0S2Z5U3 intact:EBI-10968858|ensembl:ENSP00000486115 intact:EBI-16468000 psi-mi:p98175-4(display_long)|uniprotkb:RBM10(gene name)|psi-mi:RBM10(display_short)|uniprotkb:DXS8237E(gene name synonym)|uniprotkb:G patch domain-containing protein 9(gene name synonym)|uniprotkb:GPATC9(gene name synonym)|uniprotkb:GPATCH9(gene name synonym)|uniprotkb:KIAA0122(gene name synonym)|uniprotkb:RNA-binding motif protein 10(gene name synonym)|uniprotkb:RNA-binding protein S1-1(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468584 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-721525(isoform-parent)|ensembl:ENSG00000182872(gene)|ensembl:ENST00000628161(transcript)|entrezgene/locuslink:8241(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16433799(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iKoFJ4bQhvGZ0Kq82Fhif11nCSA9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:4s+ryo4+MB7DAB5XOj8PUuYq/S4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q93062-3 uniprotkb:A0A0S2Z5U3 intact:EBI-740343|ensembl:ENSP00000340176 intact:EBI-16468000 psi-mi:q93062-3(display_long)|uniprotkb:RBPMS(gene name)|psi-mi:RBPMS(display_short)|uniprotkb:HERMES(gene name synonym)|uniprotkb:Heart and RRM expressed sequence(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468568 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740322(rbpms_human)|uniprotkb:Q93062-3(isoform-parent)|ensembl:ENSG00000157110(gene)|ensembl:ENST00000339877(transcript)|entrezgene/locuslink:11030(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16433739(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nlPMQAJoKEbPYBwsL3xodmCKd7c9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:D1ta9nzNlWZpiXef7F3K4tx/sPI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q93062-3 uniprotkb:Q8WVV9 intact:EBI-740343|ensembl:ENSP00000340176 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q93062-3(display_long)|uniprotkb:RBPMS(gene name)|psi-mi:RBPMS(display_short)|uniprotkb:HERMES(gene name synonym)|uniprotkb:Heart and RRM expressed sequence(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468552 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740322(rbpms_human)|uniprotkb:Q93062-3(isoform-parent)|ensembl:ENSG00000157110(gene)|ensembl:ENST00000339877(transcript)|entrezgene/locuslink:11030(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16433739(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nlPMQAJoKEbPYBwsL3xodmCKd7c9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:5wz5ShuFyIlTYmqnLli1FTU620E true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00148 uniprotkb:A0A0S2Z5U3 intact:EBI-348253|ensembl:ENSP00000242776|uniprotkb:Q9BVP6|uniprotkb:Q9H5W0|intact:EBI-2514455|uniprotkb:Q8N5M0|uniprotkb:B1Q2N1 intact:EBI-16468000 psi-mi:dx39a_human(display_long)|uniprotkb:DEAD box protein 39(gene name synonym)|uniprotkb:Nuclear RNA helicase URH49(gene name synonym)|uniprotkb:DDX39A(gene name)|psi-mi:DDX39A(display_short)|uniprotkb:DDX39(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468536 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000123136(gene)|ensembl:ENST00000242776(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016020"(membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:O00148|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|go:"GO:0042802"(identical protein binding)|refseq:NP_005795.2|refseq:XP_011525922.1|entrezgene/locuslink:10212(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16433476(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:EOc5EPfkNVMrdfd9Xx/snoOfhas9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:2+L52NBnsNKHr2x13xXMQG7FxTc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00148 uniprotkb:Q8WVV9 intact:EBI-348253|ensembl:ENSP00000242776|uniprotkb:Q9BVP6|uniprotkb:Q9H5W0|intact:EBI-2514455|uniprotkb:Q8N5M0|uniprotkb:B1Q2N1 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:dx39a_human(display_long)|uniprotkb:DEAD box protein 39(gene name synonym)|uniprotkb:Nuclear RNA helicase URH49(gene name synonym)|uniprotkb:DDX39A(gene name)|psi-mi:DDX39A(display_short)|uniprotkb:DDX39(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468520 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000123136(gene)|ensembl:ENST00000242776(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0016020"(membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|mint:O00148|reactome:R-HSA-159236|reactome:R-HSA-72187|reactome:R-HSA-73856|go:"GO:0042802"(identical protein binding)|refseq:NP_005795.2|refseq:XP_011525922.1|entrezgene/locuslink:10212(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16433476(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:EOc5EPfkNVMrdfd9Xx/snoOfhas9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:/Tnt2ZSOxCm3YzJ0zXDMNo3fwDg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:A0A0S2Z5U3 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-16468000 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468504 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16433047(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:G/gRHs9KISrMjyqBqzMt7Lgck9Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:Q8WVV9 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468488 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16433047(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:WSVxO54hEznojoFpOz/bZpqWROg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5JST6 uniprotkb:A0A0S2Z5U3 intact:EBI-2349927|uniprotkb:Q9H653|uniprotkb:Q5JST8|uniprotkb:Q68DK4|uniprotkb:Q8NEI0|intact:EBI-28971886|ensembl:ENSP00000404232 intact:EBI-16468000 psi-mi:efhc2_human(display_long)|uniprotkb:EFHC2(gene name)|psi-mi:EFHC2(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468472 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSP00000404232|refseq:NP_079460.2|ensembl:ENSG00000183690(gene)|ensembl:ENST00000420999(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005930"(axoneme)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0010975"(regulation of neuron projection development)|go:"GO:0036064"(ciliary basal body)|go:"GO:0043014"(alpha-tubulin binding)|go:"GO:0060285"(cilium-dependent cell motility)|go:"GO:0072686"(mitotic spindle)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR006602(Region of unknown function DM10)|interpro:IPR011992(EF-Hand type)|interpro:IPR040193|rcsb pdb:2Z13|rcsb pdb:2Z14|entrezgene/locuslink:80258(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16432726(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:O1XriQSkLcYkk7H7AlanQ1FKIBY9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:APmJJU6MaltQc/yFXLl1jpZXxqo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NVV9 uniprotkb:A0A0S2Z5U3 intact:EBI-741515|uniprotkb:Q53FQ1|uniprotkb:Q6IA99|ensembl:ENSP00000254250|uniprotkb:A6NCB6|uniprotkb:D3DSY5|uniprotkb:H9KV49 intact:EBI-16468000 psi-mi:thap1_human(display_long)|uniprotkb:THAP1(gene name)|psi-mi:THAP1(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468456 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060575.1|ensembl:ENSG00000131931(gene)|ensembl:ENST00000254250(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001650"(fibrillar center)|go:"GO:0001935"(endothelial cell proliferation)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016605"(PML body)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR006612(Zinc finger, C2CH-type)|interpro:IPR026516|interpro:IPR038441|mint:Q9NVV9|rcsb pdb:2JTG|rcsb pdb:2KO0|rcsb pdb:2L1G|refseq:NP_945354.1|entrezgene/locuslink:55145(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16432416(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/KO90pu5tBnIVq9SMx1JYPXFCEQ9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:S/hUnw+Q3wG1z3rA+Y+LJXvt/4M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NVV9 uniprotkb:Q8WVV9 intact:EBI-741515|uniprotkb:Q53FQ1|uniprotkb:Q6IA99|ensembl:ENSP00000254250|uniprotkb:A6NCB6|uniprotkb:D3DSY5|uniprotkb:H9KV49 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:thap1_human(display_long)|uniprotkb:THAP1(gene name)|psi-mi:THAP1(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468440 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060575.1|ensembl:ENSG00000131931(gene)|ensembl:ENST00000254250(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001650"(fibrillar center)|go:"GO:0001935"(endothelial cell proliferation)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0007346"(regulation of mitotic cell cycle)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016605"(PML body)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR006612(Zinc finger, C2CH-type)|interpro:IPR026516|interpro:IPR038441|mint:Q9NVV9|rcsb pdb:2JTG|rcsb pdb:2KO0|rcsb pdb:2L1G|refseq:NP_945354.1|entrezgene/locuslink:55145(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16432416(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/KO90pu5tBnIVq9SMx1JYPXFCEQ9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:a4F4s0coAqm1d19Kgl2R8/l+Zgo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z5U3 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16468000 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468424 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16432148(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:neNI/e6ct3YS3jVzT6XWIQyDcdA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:Q8WVV9 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468408 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16432148(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:IF2wLf8qhyWMxYoj7vQplA0BgTI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14503 uniprotkb:A0A0S2Z5U3 intact:EBI-711810|uniprotkb:Q96TD3|ensembl:ENSP00000256495 intact:EBI-16468000 psi-mi:bhe40_human(display_long)|uniprotkb:BHLHE40(gene name)|psi-mi:BHLHE40(display_short)|uniprotkb:Differentially expressed in chondrocytes protein 1(gene name synonym)|uniprotkb:Enhancer-of-split and hairy-related protein 2(gene name synonym)|uniprotkb:Stimulated by retinoic acid gene 13 protein(gene name synonym)|uniprotkb:BHLHB2(gene name synonym)|uniprotkb:DEC1(gene name synonym)|uniprotkb:SHARP2(gene name synonym)|uniprotkb:STRA13(gene name synonym)|uniprotkb:Class B basic helix-loop-helix protein 2(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468392 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000134107(gene)|ensembl:ENST00000256495(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009952"(anterior/posterior pattern specification)|go:"GO:0016604"(nuclear body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043425"(bHLH transcription factor binding)|go:"GO:0043426"(MRF binding)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046982"(protein heterodimerization activity)|refseq:NP_003661.1|dip:DIP-36698N|go:"GO:0050767"(regulation of neurogenesis)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070888"(E-box binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR003650(Orange)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR036638|mint:O14503|reactome:R-HSA-1368108|entrezgene/locuslink:8553(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16432088(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JZrZ1Yo2PF33s9Lf8rLTHCqoptk9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:OqvUyfmkBZOInwv6PQlz7miJtjc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14503 uniprotkb:Q8WVV9 intact:EBI-711810|uniprotkb:Q96TD3|ensembl:ENSP00000256495 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:bhe40_human(display_long)|uniprotkb:BHLHE40(gene name)|psi-mi:BHLHE40(display_short)|uniprotkb:Differentially expressed in chondrocytes protein 1(gene name synonym)|uniprotkb:Enhancer-of-split and hairy-related protein 2(gene name synonym)|uniprotkb:Stimulated by retinoic acid gene 13 protein(gene name synonym)|uniprotkb:BHLHB2(gene name synonym)|uniprotkb:DEC1(gene name synonym)|uniprotkb:SHARP2(gene name synonym)|uniprotkb:STRA13(gene name synonym)|uniprotkb:Class B basic helix-loop-helix protein 2(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468376 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000134107(gene)|ensembl:ENST00000256495(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007623"(circadian rhythm)|go:"GO:0009952"(anterior/posterior pattern specification)|go:"GO:0016604"(nuclear body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043425"(bHLH transcription factor binding)|go:"GO:0043426"(MRF binding)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046982"(protein heterodimerization activity)|refseq:NP_003661.1|dip:DIP-36698N|go:"GO:0050767"(regulation of neurogenesis)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070888"(E-box binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR003650(Orange)|interpro:IPR011598(Helix-loop-helix DNA-binding)|interpro:IPR036638|mint:O14503|reactome:R-HSA-1368108|entrezgene/locuslink:8553(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16432088(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JZrZ1Yo2PF33s9Lf8rLTHCqoptk9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:ntBrV/xXX1Bc4+KirPCiXFhoFv8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:A0A0S2Z5U3 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-16468000 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468360 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16430783(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:lFaed2VIrUq3XZEeOXscngJ9kc4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:Q8WVV9 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468344 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16430783(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:++rZAaxmSSyoR4mTJpF4UAhalF0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99836 uniprotkb:F8VVZ1 intact:EBI-447677|uniprotkb:P78397|uniprotkb:Q53XS7|uniprotkb:B4DKH8|uniprotkb:B4DKU4|uniprotkb:J3KPU4|uniprotkb:J3KQ87|uniprotkb:J3KQJ6|uniprotkb:B4DQ60|uniprotkb:B4DQ72|ensembl:ENSP00000379625|ensembl:ENSP00000498360 intact:EBI-16469141|ensembl:ENSP00000448197|ensembl:ENSP00000449553|ensembl:ENSP00000449693|ensembl:ENSP00000449859 psi-mi:myd88_human(display_long)|uniprotkb:MYD88(gene name)|psi-mi:MYD88(display_short) psi-mi:f8vvz1_human(display_long)|uniprotkb:IRAK4(gene name)|psi-mi:IRAK4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469144 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166037.1|refseq:NP_001166039.1|refseq:NP_001166040.1|refseq:NP_002459.2|dip:DIP-31349N|go:"GO:0032731"(positive regulation of interleukin-1 beta production)|go:"GO:0032740"(positive regulation of interleukin-17 production)|go:"GO:0032747"(positive regulation of interleukin-23 production)|go:"GO:0032755"(positive regulation of interleukin-6 production)|go:"GO:0032757"(positive regulation of interleukin-8 production)|go:"GO:0032760"(positive regulation of tumor necrosis factor production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034158"(toll-like receptor 8 signaling pathway)|go:"GO:0035325"(Toll-like receptor binding)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0042802"(identical protein binding)|go:"GO:0042832"(defense response to protozoan)|go:"GO:0050671"(positive regulation of lymphocyte proliferation)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043621"(protein self-association)|go:"GO:0045087"(innate immune response)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0048661"(positive regulation of smooth muscle cell proliferation)|go:"GO:1902622"(regulation of neutrophil migration)|go:"GO:2000338"("regulation of chemokine (C-X-C motif) ligand 1 production")|go:"GO:2000341"("regulation of chemokine (C-X-C motif) ligand 2 production")|interpro:IPR000157(Toll-Interleukin receptor)|interpro:IPR000488(Death)|interpro:IPR011029(DEATH-like)|interpro:IPR017281(Myeloid differentiation primary response protein MyD88)|interpro:IPR034249|interpro:IPR035897|mint:Q99836|rcsb pdb:2JS7|rcsb pdb:2Z5V|rcsb pdb:3MOP|rcsb pdb:4DOM|rcsb pdb:4EO7|rcsb pdb:6I3N|rcsb pdb:7BEQ|rcsb pdb:7BER|rcsb pdb:7L6W|reactome:R-HSA-1236974|reactome:R-HSA-1257604|reactome:R-HSA-166058|reactome:R-HSA-1810476|reactome:R-HSA-209543|reactome:R-HSA-3134963|reactome:R-HSA-5602498|reactome:R-HSA-5602680|reactome:R-HSA-5603037|reactome:R-HSA-5603041|reactome:R-HSA-6811558|reactome:R-HSA-9020702|reactome:R-HSA-975110|reactome:R-HSA-975155|reactome:R-HSA-975871|reactome:R-HSA-975138|ensembl:ENSG00000172936(gene)|ensembl:ENST00000396334(transcript)|ensembl:ENST00000650905(transcript)|go:"GO:0002238"(response to molecule of fungal origin)|go:"GO:0002269"(leukocyte activation involved in inflammatory response)|go:"GO:0002283"(neutrophil activation involved in immune response)|go:"GO:0002755"(MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0005121"(Toll binding)|go:"GO:0005123"(death receptor binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006909"(phagocytosis)|go:"GO:0006915"(apoptotic process)|go:"GO:0007165"(signal transduction)|go:"GO:0007166"(cell surface receptor signaling pathway)|go:"GO:0007254"(JNK cascade)|go:"GO:0008063"(Toll signaling pathway)|go:"GO:0009682"(induced systemic resistance)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016064"(immunoglobulin mediated immune response)|go:"GO:0031663"(lipopolysaccharide-mediated signaling pathway)|go:"GO:0032481"(positive regulation of type I interferon production)|go:"GO:0032494"(response to peptidoglycan)|go:"GO:0032722"(positive regulation of chemokine production)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051607"(defense response to virus)|go:"GO:0060337"(type I interferon signaling pathway)|go:"GO:0070498"(interleukin-1-mediated signaling pathway)|go:"GO:0070555"(response to interleukin-1)|go:"GO:0070935"(3'-UTR-mediated mRNA stabilization)|go:"GO:0070944"(neutrophil-mediated killing of bacterium)|go:"GO:0070976"(TIR domain binding)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071260"(cellular response to mechanical stimulus)|go:"GO:0090557"(establishment of endothelial intestinal barrier)|go:"GO:0140052"(cellular response to oxidised low-density lipoprotein particle stimulus)|go:"GO:1900017"(positive regulation of cytokine production involved in inflammatory response)|go:"GO:1900227"(positive regulation of NLRP3 inflammasome complex assembly)|go:"GO:0050830"(defense response to Gram-positive bacterium)|entrezgene/locuslink:4615(identity) ensembl:ENSG00000198001(gene)|ensembl:ENST00000547521(transcript)|ensembl:ENST00000550361(transcript)|ensembl:ENST00000550615(transcript)|ensembl:ENST00000552309(transcript)|go:"GO:0016301"(kinase activity)|interpro:IPR011029(DEATH-like)|entrezgene/locuslink:51135(identity) intact:EBI-16431429(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:B920s5F0eUql/jtwlByyhI7ojGI9606 rogid:tyQt66S4ehIfxE18YIVr6Ylmlak9606 rigid:QVILkOlqjXtQIStSYBQ+ZabZyKI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95751 uniprotkb:P49441 intact:EBI-740738|ensembl:ENSP00000359557|uniprotkb:Q6IAR6 intact:EBI-725432|ensembl:ENSP00000325423|ensembl:ENSP00000376142 psi-mi:ldoc1_human(display_long)|uniprotkb:Leucine zipper protein down-regulated in cancer cells(gene name synonym)|uniprotkb:LDOC1(gene name)|psi-mi:LDOC1(display_short)|uniprotkb:BCUR1(gene name synonym) psi-mi:inpp_human(display_long)|uniprotkb:INPP1(gene name)|psi-mi:INPP1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469125 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036449.1|ensembl:ENSG00000182195(gene)|ensembl:ENST00000370526(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071225"(cellular response to muramyl dipeptide)|interpro:IPR032549|interpro:IPR032567|entrezgene/locuslink:23641(identity) refseq:NP_001122400.1|refseq:NP_002185.1|refseq:XP_005246589.1|ensembl:ENSG00000151689(gene)|ensembl:ENST00000322522(transcript)|ensembl:ENST00000392329(transcript)|go:"GO:0004441"(inositol-1,4-bisphosphate 1-phosphatase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006796"(phosphate-containing compound metabolic process)|go:"GO:0007165"(signal transduction)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0046855"(inositol phosphate dephosphorylation)|go:"GO:0046872"(metal ion binding)|interpro:IPR000760(Inositol monophosphatase)|interpro:IPR020550|interpro:IPR020583|reactome:R-HSA-1855183|entrezgene/locuslink:3628(identity) intact:EBI-16433613(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Ediu0oNiZ/+YVY8l3fNdgP5A+v09606 rogid:nPr4mBqj4mWyNAWpbA+BY1Z8ZU49606 rigid:PK/xydskR5ISgDMbQ79JdY7CkF4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P20393 uniprotkb:P49441 intact:EBI-2811738|uniprotkb:Q15304|uniprotkb:Q0P5Z4|ensembl:ENSP00000246672 intact:EBI-725432|ensembl:ENSP00000325423|ensembl:ENSP00000376142 psi-mi:nr1d1_human(display_long)|uniprotkb:NR1D1(gene name)|psi-mi:NR1D1(display_short)|uniprotkb:EAR1(gene name synonym)|uniprotkb:HREV(gene name synonym)|uniprotkb:THRAL(gene name synonym)|uniprotkb:Rev-erbA-alpha(gene name synonym)|uniprotkb:V-erbA-related protein 1(gene name synonym) psi-mi:inpp_human(display_long)|uniprotkb:INPP1(gene name)|psi-mi:INPP1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469109 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_068370.1|ensembl:ENSG00000126368(gene)|ensembl:ENST00000246672(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001678"(cellular glucose homeostasis)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005978"(glycogen biosynthetic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010498"(proteasomal protein catabolic process)|go:"GO:0016604"(nuclear body)|go:"GO:0019216"(regulation of lipid metabolic process)|go:"GO:0020037"(heme binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0031648"(protein destabilization)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0034144"(negative regulation of toll-like receptor 4 signaling pathway)|go:"GO:0042632"(cholesterol homeostasis)|go:"GO:0042749"(regulation of circadian sleep/wake cycle)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043124"(negative regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043197"(dendritic spine)|go:"GO:0044321"(response to leptin)|go:"GO:0045598"(regulation of fat cell differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0060086"(circadian temperature homeostasis)|go:"GO:0061178"(regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0061469"(regulation of type B pancreatic cell proliferation)|go:"GO:0061889"(negative regulation of astrocyte activation)|go:"GO:0070859"(positive regulation of bile acid biosynthetic process)|go:"GO:0070888"(E-box binding)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071347"(cellular response to interleukin-1)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0120163"(negative regulation of cold-induced thermogenesis)|go:"GO:0150079"(negative regulation of neuroinflammatory response)|go:"GO:1903979"(negative regulation of microglial cell activation)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1A6Y|rcsb pdb:1EF6|rcsb pdb:1GA5|rcsb pdb:1HLZ|rcsb pdb:3N00|reactome:R-HSA-1368071|reactome:R-HSA-1989781|reactome:R-HSA-2151201|reactome:R-HSA-383280|reactome:R-HSA-400253|reactome:R-HSA-9707616|dip:DIP-48396N|entrezgene/locuslink:9572(identity) refseq:NP_001122400.1|refseq:NP_002185.1|refseq:XP_005246589.1|ensembl:ENSG00000151689(gene)|ensembl:ENST00000322522(transcript)|ensembl:ENST00000392329(transcript)|go:"GO:0004441"(inositol-1,4-bisphosphate 1-phosphatase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006796"(phosphate-containing compound metabolic process)|go:"GO:0007165"(signal transduction)|go:"GO:0046854"(phosphatidylinositol phosphate biosynthetic process)|go:"GO:0046855"(inositol phosphate dephosphorylation)|go:"GO:0046872"(metal ion binding)|interpro:IPR000760(Inositol monophosphatase)|interpro:IPR020550|interpro:IPR020583|reactome:R-HSA-1855183|entrezgene/locuslink:3628(identity) intact:EBI-16430608(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UfaVQzUQ3wD4xDBh1sjp+eaawY89606 rogid:nPr4mBqj4mWyNAWpbA+BY1Z8ZU49606 rigid:PwAXSbfGyz/hAEX1ymmifS0Eoi4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 intact:EBI-16469090 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 - psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:"ccsb isoform id: hspd1_4"(display_short)|psi-mi:EBI-16469090(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469093 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) entrezgene/locuslink:3329(identity) intact:EBI-16432228(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:hhB7/gWvIqi2AaZO0SBi2IWXwio9606 rigid:yVscnBLaZq/kivevgQZnGrCS7cA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 intact:EBI-16469071 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 - psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:"ccsb isoform id: hspd1_2"(display_short)|psi-mi:EBI-16469071(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469074 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) entrezgene/locuslink:3329(identity) intact:EBI-16432228(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:h9GgE/V//AvJcuqOedYq2wr49Pc9606 rigid:PDmrtgoijYIWQUUgKcL81vsKSkI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y5V3 uniprotkb:A0A0S2Z5U3 intact:EBI-716006|uniprotkb:Q5VSH6|uniprotkb:Q8IZ84|uniprotkb:Q8WY92|uniprotkb:Q9H352|uniprotkb:Q9HBT4|uniprotkb:Q9UF36|ensembl:ENSP00000325333|ensembl:ENSP00000364874|ensembl:ENSP00000364927 intact:EBI-16468000 psi-mi:magd1_human(display_long)|uniprotkb:MAGE-D1 antigen(gene name synonym)|uniprotkb:Neurotrophin receptor-interacting MAGE homolog(gene name synonym)|uniprotkb:MAGE tumor antigen CCF(gene name synonym)|uniprotkb:MAGED1(gene name)|psi-mi:MAGED1(display_short)|uniprotkb:NRAGE(gene name synonym)|uniprotkb:PRO2292(orf name)|uniprotkb:PP2250(orf name) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469055 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005332.1|refseq:NP_001005333.1|refseq:NP_008917.3|ensembl:ENSP00000325333|ensembl:ENST00000375695|ensembl:ENSP00000364847|ensembl:ENSP00000364874|ensembl:ENSP00000364927|refseq:XP_011529137.1|refseq:XP_016885467.1|refseq:XP_016885468.1|refseq:XP_016885469.1|ensembl:ENSG00000179222(gene)|ensembl:ENST00000326587(transcript)|ensembl:ENST00000375722(transcript)|ensembl:ENST00000375772(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0090190"(positive regulation of branching involved in ureteric bud morphogenesis)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|go:"GO:2001235"(positive regulation of apoptotic signaling pathway)|interpro:IPR002190(MAGE protein)|interpro:IPR030083|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:Q9Y5V3|reactome:R-HSA-193648|reactome:R-HSA-418889|entrezgene/locuslink:9500(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16440594(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UTg0r4zGMXfTZqBN4SFmgu6IukI9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:9bGQVleeOW5VRiK3ossnN2APJOA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y5V3 uniprotkb:Q8WVV9 intact:EBI-716006|uniprotkb:Q5VSH6|uniprotkb:Q8IZ84|uniprotkb:Q8WY92|uniprotkb:Q9H352|uniprotkb:Q9HBT4|uniprotkb:Q9UF36|ensembl:ENSP00000325333|ensembl:ENSP00000364874|ensembl:ENSP00000364927 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:magd1_human(display_long)|uniprotkb:MAGE-D1 antigen(gene name synonym)|uniprotkb:Neurotrophin receptor-interacting MAGE homolog(gene name synonym)|uniprotkb:MAGE tumor antigen CCF(gene name synonym)|uniprotkb:MAGED1(gene name)|psi-mi:MAGED1(display_short)|uniprotkb:NRAGE(gene name synonym)|uniprotkb:PRO2292(orf name)|uniprotkb:PP2250(orf name) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469039 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005332.1|refseq:NP_001005333.1|refseq:NP_008917.3|ensembl:ENSP00000325333|ensembl:ENST00000375695|ensembl:ENSP00000364847|ensembl:ENSP00000364874|ensembl:ENSP00000364927|refseq:XP_011529137.1|refseq:XP_016885467.1|refseq:XP_016885468.1|refseq:XP_016885469.1|ensembl:ENSG00000179222(gene)|ensembl:ENST00000326587(transcript)|ensembl:ENST00000375722(transcript)|ensembl:ENST00000375772(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0090190"(positive regulation of branching involved in ureteric bud morphogenesis)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|go:"GO:2001235"(positive regulation of apoptotic signaling pathway)|interpro:IPR002190(MAGE protein)|interpro:IPR030083|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:Q9Y5V3|reactome:R-HSA-193648|reactome:R-HSA-418889|entrezgene/locuslink:9500(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16440594(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UTg0r4zGMXfTZqBN4SFmgu6IukI9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:ZaCwLYCOfLnWFpeH5K7YtKGVOUk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6UY14-3 uniprotkb:A0A0S2Z5U3 intact:EBI-10173507|ensembl:ENSP00000358035|ensembl:ENSP00000501295 intact:EBI-16468000 psi-mi:q6uy14-3(display_long)|uniprotkb:TSRC1(gene name synonym)|uniprotkb:Thrombospondin repeat-containing protein 1(gene name synonym)|uniprotkb:PP1396(orf name)|uniprotkb:UNQ2803/PRO34012(orf name)|uniprotkb:ADAMTSL4(gene name)|psi-mi:ADAMTSL4(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469020 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000143382(gene)|ensembl:ENST00000369039(transcript)|ensembl:ENST00000674043(transcript)|intact:EBI-742002(isoform-parent)|uniprotkb:Q6UY14-3(isoform-parent)|entrezgene/locuslink:54507(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16440344(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7EB8HdDfZI57O38GQO8ZSygWp2U9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:VoSVGaG0uHvirP/euLfEGmKDnEw true sufficient binding region:674-1097 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6UY14-3 uniprotkb:Q8WVV9 intact:EBI-10173507|ensembl:ENSP00000358035|ensembl:ENSP00000501295 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:q6uy14-3(display_long)|uniprotkb:TSRC1(gene name synonym)|uniprotkb:Thrombospondin repeat-containing protein 1(gene name synonym)|uniprotkb:PP1396(orf name)|uniprotkb:UNQ2803/PRO34012(orf name)|uniprotkb:ADAMTSL4(gene name)|psi-mi:ADAMTSL4(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469001 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000143382(gene)|ensembl:ENST00000369039(transcript)|ensembl:ENST00000674043(transcript)|intact:EBI-742002(isoform-parent)|uniprotkb:Q6UY14-3(isoform-parent)|entrezgene/locuslink:54507(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16440344(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7EB8HdDfZI57O38GQO8ZSygWp2U9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:mgjhHNmKKZzqo5oFO3dErjNy2Qo true sufficient binding region:674-1097 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43597 uniprotkb:A0A0S2Z5U3 intact:EBI-742487|uniprotkb:Q5T6Z7|ensembl:ENSP00000366306|ensembl:ENSP00000366308|uniprotkb:B2R9J9 intact:EBI-16468000 psi-mi:spy2_human(display_long)|uniprotkb:SPRY2(gene name)|psi-mi:SPRY2(display_short) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468985 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005833.1|rcsb pdb:5HL0|reactome:R-HSA-1295596|reactome:R-HSA-182971|rcsb pdb:5HKZ|ensembl:ENST00000377102(transcript)|ensembl:ENST00000377104(transcript)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|ensembl:ENSG00000136158(gene)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010719"(negative regulation of epithelial to mesenchymal transition)|go:"GO:0010801"(negative regulation of peptidyl-threonine phosphorylation)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031345"(negative regulation of cell projection organization)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0032587"(ruffle membrane)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034260"(negative regulation of GTPase activity)|go:"GO:0035924"(cellular response to vascular endothelial growth factor stimulus)|go:"GO:0040037"(negative regulation of fibroblast growth factor receptor signaling pathway)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043407"(negative regulation of MAP kinase activity)|go:"GO:0043539"(protein serine/threonine kinase activator activity)|go:"GO:0045165"(cell fate commitment)|go:"GO:0046580"(negative regulation of Ras protein signal transduction)|go:"GO:0048513"(animal organ development)|go:"GO:0051387"(negative regulation of neurotrophin TRK receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060437"(lung growth)|go:"GO:0060449"(bud elongation involved in lung branching)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:1900747"(negative regulation of vascular endothelial growth factor signaling pathway)|go:"GO:1902747"(negative regulation of lens fiber cell differentiation)|go:"GO:1990752"(microtubule end)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR007875(Sprouty)|interpro:IPR030780|mint:O43597|rcsb pdb:3BUM|rcsb pdb:3OB1|rcsb pdb:5HKY|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|refseq:NP_001305465.1|refseq:NP_001305466.1|refseq:NP_001305467.1|entrezgene/locuslink:10253(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16438980(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1omauzisc6MdZlogMotUmtauSI9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:98Rdl7v1gaeTCJVn87bSctg+iPY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43597 uniprotkb:Q8WVV9 intact:EBI-742487|uniprotkb:Q5T6Z7|ensembl:ENSP00000366306|ensembl:ENSP00000366308|uniprotkb:B2R9J9 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:spy2_human(display_long)|uniprotkb:SPRY2(gene name)|psi-mi:SPRY2(display_short) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468969 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005833.1|rcsb pdb:5HL0|reactome:R-HSA-1295596|reactome:R-HSA-182971|rcsb pdb:5HKZ|ensembl:ENST00000377102(transcript)|ensembl:ENST00000377104(transcript)|go:"GO:0000132"(establishment of mitotic spindle orientation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|ensembl:ENSG00000136158(gene)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0007605"(sensory perception of sound)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010719"(negative regulation of epithelial to mesenchymal transition)|go:"GO:0010801"(negative regulation of peptidyl-threonine phosphorylation)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031345"(negative regulation of cell projection organization)|go:"GO:0031397"(negative regulation of protein ubiquitination)|go:"GO:0032587"(ruffle membrane)|go:"GO:0033138"(positive regulation of peptidyl-serine phosphorylation)|go:"GO:0034260"(negative regulation of GTPase activity)|go:"GO:0035924"(cellular response to vascular endothelial growth factor stimulus)|go:"GO:0040037"(negative regulation of fibroblast growth factor receptor signaling pathway)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043407"(negative regulation of MAP kinase activity)|go:"GO:0043539"(protein serine/threonine kinase activator activity)|go:"GO:0045165"(cell fate commitment)|go:"GO:0046580"(negative regulation of Ras protein signal transduction)|go:"GO:0048513"(animal organ development)|go:"GO:0051387"(negative regulation of neurotrophin TRK receptor signaling pathway)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060437"(lung growth)|go:"GO:0060449"(bud elongation involved in lung branching)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:1900747"(negative regulation of vascular endothelial growth factor signaling pathway)|go:"GO:1902747"(negative regulation of lens fiber cell differentiation)|go:"GO:1990752"(microtubule end)|go:"GO:1990830"(cellular response to leukemia inhibitory factor)|interpro:IPR007875(Sprouty)|interpro:IPR030780|mint:O43597|rcsb pdb:3BUM|rcsb pdb:3OB1|rcsb pdb:5HKY|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|refseq:NP_001305465.1|refseq:NP_001305466.1|refseq:NP_001305467.1|entrezgene/locuslink:10253(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16438980(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u1omauzisc6MdZlogMotUmtauSI9606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:yU67t0qGg1IRr2FK8STnjK7hywo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978 uniprotkb:A0A0S2Z5U3 intact:EBI-304185|intact:EBI-28971491|ensembl:ENSP00000317788|ensembl:ENSP00000353552|uniprotkb:Q07244|uniprotkb:Q15671|uniprotkb:Q59F98|uniprotkb:Q60577|uniprotkb:Q922Y7|uniprotkb:Q96J62|uniprotkb:Q5T6W4|intact:EBI-3440248|uniprotkb:Q6IBN1 intact:EBI-16468000 psi-mi:hnrpk_human(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468953 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|go:"GO:0010988"(regulation of low-density lipoprotein particle clearance)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0042802"(identical protein binding)|ensembl:ENST00000351839(transcript)|ensembl:ENST00000360384(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000785"(chromatin)|go:"GO:0002102"(podosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006396"(RNA processing)|go:"GO:0007165"(signal transduction)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0042995"(cell projection)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1902165"(regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:1905599"(positive regulation of low-density lipoprotein receptor activity)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012987(ROK, N-terminal)|interpro:IPR033090|interpro:IPR036612|mint:P61978|rcsb pdb:1J5K|rcsb pdb:1KHM|rcsb pdb:1ZZI|rcsb pdb:1ZZJ|go:"GO:0043066"(negative regulation of apoptotic process)|reactome:R-HSA-4570464|reactome:R-HSA-72163|reactome:R-HSA-72203|reactome:R-HSA-9610379|rcsb pdb:1ZZK|refseq:NP_002131.2|refseq:NP_112552.1|refseq:NP_112553.1|ensembl:ENSP00000317788|ensembl:ENSP00000353552|ensembl:ENST00000376263|ensembl:ENSP00000365439|ensembl:ENST00000376281|ensembl:ENSP00000365458|refseq:NP_001305115.1|refseq:NP_001305116.1|refseq:NP_001305117.1|refseq:XP_016870157.1|refseq:XP_005252017.1|refseq:XP_005252020.1|refseq:XP_005252022.1|dip:DIP-31805N|entrezgene/locuslink:3190(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16438850(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YZQD5JJkHPUMtZ4XUA9fQkNfXzc9606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:JvtnlIBDfrD6srCGlwddnIzucVg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:A0A0S2Z5U3 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-16468000 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:a0a0s2z5u3_human(display_long)|uniprotkb:HNRPLL(gene name)|psi-mi:HNRPLL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468937 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006397"(mRNA processing)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|interpro:IPR034985|interpro:IPR034986|interpro:IPR034983|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|interpro:IPR021790|entrezgene/locuslink:92906(identity) intact:EBI-16438071(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:YOsGERoLdlCVJVfYaFThi//U3/k9606 rigid:AwTNFyfZ8etJs2GyihwDcISIKvo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:Q8WVV9 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-535849|uniprotkb:Q659B9|uniprotkb:Q8IVH5|uniprotkb:Q8IVH6|uniprotkb:Q96HR5|uniprotkb:Q5JB51|uniprotkb:Q53T80|uniprotkb:Q5JB52|ensembl:ENSP00000390625 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:hnrll_human(display_long)|uniprotkb:HNRNPLL(gene name)|psi-mi:HNRNPLL(display_short)|uniprotkb:HNRPLL(gene name synonym)|uniprotkb:SRRF(gene name synonym)|uniprotkb:Stromal RNA-regulating factor(gene name synonym)|uniprotkb:BLOCK24(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16468921 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) refseq:NP_001136122.1|refseq:NP_612403.2|ensembl:ENST00000449105(transcript)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR021790|interpro:IPR034983|go:"GO:0003723"(RNA binding)|interpro:IPR034985|go:"GO:0003729"(mRNA binding)|interpro:IPR034986|go:"GO:0005634"(nucleus)|interpro:IPR034987|go:"GO:0006397"(mRNA processing)|go:"GO:0016020"(membrane)|go:"GO:0033120"(positive regulation of RNA splicing)|go:"GO:0043484"(regulation of RNA splicing)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR035979|mint:Q8WVV9|interpro:IPR006536(HnRNP-L/PTB/hephaestus splicing factor)|ensembl:ENSG00000143889(gene)|entrezgene/locuslink:92906(identity) intact:EBI-16438071(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:ELIKIpDp+c/Owy7sUJ2M3iYNBGk9606 rigid:L7p3ap1/F9hRe1kTAvUqEto5vF8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:P26440-2 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-16469190|ensembl:ENSP00000498731 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:p26440-2(display_long)|uniprotkb:Butyryl-CoA dehydrogenase(gene name synonym)|uniprotkb:IVD(gene name)|psi-mi:IVD(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469196 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) intact:EBI-2866408(isoform-parent)|ensembl:ENSG00000128928(gene)|ensembl:ENST00000650656(transcript)|entrezgene/locuslink:3712(identity) intact:EBI-16429173(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2018/09/18 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:QjW2mNCenQf/Ih5vqq4aG6P1xUU9606 rigid:xupT8yO5GweGyqhVckdBNSqbcJ0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:P26440 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-2866408|uniprotkb:J3KR54|uniprotkb:Q53XZ9|uniprotkb:Q96AF6|uniprotkb:B2RCV5|uniprotkb:B3KVI7|ensembl:ENSP00000499074 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:ivd_human(display_long)|uniprotkb:IVD(gene name)|psi-mi:IVD(display_short)|uniprotkb:Butyryl-CoA dehydrogenase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469174 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) refseq:NP_002216.2|refseq:NP_001152980.1|ensembl:ENSG00000128928(gene)|ensembl:ENST00000651168(transcript)|go:"GO:0004085"(butyryl-CoA dehydrogenase activity)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006552"(leucine catabolic process)|go:"GO:0008470"(isovaleryl-CoA dehydrogenase activity)|go:"GO:0009083"(branched-chain amino acid catabolic process)|go:"GO:0033539"(fatty acid beta-oxidation using acyl-CoA dehydrogenase)|go:"GO:0042802"(identical protein binding)|go:"GO:0050660"(flavin adenine dinucleotide binding)|interpro:IPR006089(Acyl-CoA dehydrogenase, conserved site)|interpro:IPR006091(Acyl-CoA dehydrogenase/oxidase, central region)|interpro:IPR009075(Acyl-CoA dehydrogenase/oxidase C-terminal)|interpro:IPR009100(Acyl-CoA dehydrogenase/oxidase, middle and N-terminal)|interpro:IPR013786(Acyl-CoA dehydrogenase/oxidase, N-terminal)|interpro:IPR034183|interpro:IPR036250|interpro:IPR037069|rcsb pdb:1IVH|reactome:R-HSA-70895|entrezgene/locuslink:3712(identity) intact:EBI-16429173(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2018/09/18 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:GewB1Yyc2EEVepN5e1H068xpjI09606 rigid:V01dUY2LBYA0pDOhCiibH8UgbGg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z5P4 intact:EBI-16439278 intact:EBI-16469235 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z5p4_human(display_long)|uniprotkb:JMJD5(gene name)|psi-mi:JMJD5(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469241 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) interpro:IPR041667|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|entrezgene/locuslink:79831(identity) intact:EBI-16439577(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:7/IA0JDDT45tTJ9vbsjpiFn5GSk9606 rigid:y04mg9Om7j70bktrA8ZPaoBSIek true - sufficient binding region:1-300 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UHX1-6 uniprotkb:A0A0S2Z5A4 intact:EBI-11085298|ensembl:ENSP00000431960 intact:EBI-16469260 psi-mi:q9uhx1-6(display_long)|uniprotkb:PUF60(gene name)|psi-mi:PUF60(display_short)|uniprotkb:"60 kDa poly(U)-binding-splicing factor"(gene name synonym)|uniprotkb:FIR(gene name synonym)|uniprotkb:FUSE-binding protein-interacting repressor(gene name synonym)|uniprotkb:ROBPI(gene name synonym)|uniprotkb:Ro-binding protein 1(gene name synonym)|uniprotkb:SIAHBP1(gene name synonym)|uniprotkb:Siah-binding protein 1(gene name synonym) psi-mi:a0a0s2z5a4_human(display_long)|uniprotkb:KIAA0907(gene name)|psi-mi:KIAA0907(display_short)|uniprotkb:KH homology domain-containing protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469263 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000179950(gene)|ensembl:ENST00000527197(transcript)|intact:EBI-1053259(isoform-parent)|uniprotkb:Q9UHX1-6(isoform-parent)|entrezgene/locuslink:22827(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR036612|interpro:IPR031121|entrezgene/locuslink:22889(identity) intact:EBI-16433440(see-also) isoform-comment:"Contains a glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) at position 14." - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:rSsTImwmpEAWMCxLzF5Y4zVdeFM9606 rogid:DV9J710SOPNGaqeNv+Gpuyh0Mus9606 rigid:cTkVOaaYUWoS6dUgmNxlyeEDSbo true sufficient binding region:15-513 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q14498-3 uniprotkb:A0A0S2Z5A4 intact:EBI-6654703|ensembl:ENSP00000436747 intact:EBI-16469260 psi-mi:q14498-3(display_long)|uniprotkb:RBM39(gene name)|psi-mi:RBM39(display_short)|uniprotkb:HCC1(gene name synonym)|uniprotkb:RNPC2(gene name synonym)|uniprotkb:Hepatocellular carcinoma protein 1(gene name synonym)|uniprotkb:RNA-binding motif protein 39(gene name synonym)|uniprotkb:RNA-binding region-containing protein 2(gene name synonym)|uniprotkb:Splicing factor HCC1(gene name synonym)|uniprotkb:CAPER alpha(gene name synonym) psi-mi:a0a0s2z5a4_human(display_long)|uniprotkb:KIAA0907(gene name)|psi-mi:KIAA0907(display_short)|uniprotkb:KH homology domain-containing protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469282 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000131051(gene)|ensembl:ENST00000528062(transcript)|intact:EBI-395290(isoform-parent)|entrezgene/locuslink:9584(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR036612|interpro:IPR031121|entrezgene/locuslink:22889(identity) intact:EBI-16435466(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gEOR16XItpn4AN2H+cvwNQW+IUU9606 rogid:DV9J710SOPNGaqeNv+Gpuyh0Mus9606 rigid:E2rejSS7nrL/+ovvfT8hwE5zmFY true sufficient binding region:136-508 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UHX1-2 uniprotkb:A0A0S2Z5A4 intact:EBI-11529177|ensembl:ENSP00000322036|ensembl:ENSP00000478495 intact:EBI-16469260 psi-mi:q9uhx1-2(display_long)|uniprotkb:PUF60(gene name)|psi-mi:PUF60(display_short)|uniprotkb:"60 kDa poly(U)-binding-splicing factor"(gene name synonym)|uniprotkb:FIR(gene name synonym)|uniprotkb:FUSE-binding protein-interacting repressor(gene name synonym)|uniprotkb:ROBPI(gene name synonym)|uniprotkb:Ro-binding protein 1(gene name synonym)|uniprotkb:SIAHBP1(gene name synonym)|uniprotkb:Siah-binding protein 1(gene name synonym) psi-mi:a0a0s2z5a4_human(display_long)|uniprotkb:KIAA0907(gene name)|psi-mi:KIAA0907(display_short)|uniprotkb:KH homology domain-containing protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469301 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1053259(isoform-parent)|ensembl:ENSG00000179950(gene)|ensembl:ENSG00000274081(gene)|ensembl:ENST00000349157(transcript)|ensembl:ENST00000612237(transcript)|uniprotkb:Q9UHX1-2(isoform-parent)|entrezgene/locuslink:22827(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR036612|interpro:IPR031121|entrezgene/locuslink:22889(identity) intact:EBI-16435982(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:snVN9Lw5+MP2/aiq4z08ANwvr209606 rogid:DV9J710SOPNGaqeNv+Gpuyh0Mus9606 rigid:Hw+S3XiHqNDuxVzCFZ5lL9SGZ/8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UHX1-5 uniprotkb:A0A0S2Z5A4 intact:EBI-11526420|ensembl:ENSP00000395417|ensembl:ENSP00000478209 intact:EBI-16469260 psi-mi:q9uhx1-5(display_long)|uniprotkb:PUF60(gene name)|psi-mi:PUF60(display_short)|uniprotkb:"60 kDa poly(U)-binding-splicing factor"(gene name synonym)|uniprotkb:FIR(gene name synonym)|uniprotkb:FUSE-binding protein-interacting repressor(gene name synonym)|uniprotkb:ROBPI(gene name synonym)|uniprotkb:Ro-binding protein 1(gene name synonym)|uniprotkb:SIAHBP1(gene name synonym)|uniprotkb:Siah-binding protein 1(gene name synonym) psi-mi:a0a0s2z5a4_human(display_long)|uniprotkb:KIAA0907(gene name)|psi-mi:KIAA0907(display_short)|uniprotkb:KH homology domain-containing protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469317 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1053259(isoform-parent)|ensembl:ENSG00000179950(gene)|ensembl:ENSG00000274081(gene)|ensembl:ENST00000456095(transcript)|ensembl:ENST00000620953(transcript)|entrezgene/locuslink:22827(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR036612|interpro:IPR031121|entrezgene/locuslink:22889(identity) intact:EBI-16437536(see-also) isoform-comment:"Contains a glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) at position 14." - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PSbIU++DIL6ysF0ccd3ZHzeJ5rs9606 rogid:DV9J710SOPNGaqeNv+Gpuyh0Mus9606 rigid:9B5t8xjS+JgND1CChJZSmm6eLD0 true sufficient binding region:15-530 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43365 uniprotkb:A0A0S2Z5A4 intact:EBI-749530|uniprotkb:Q9NSD3|intact:EBI-10178394|uniprotkb:Q6FHH8|ensembl:ENSP00000350592|ensembl:ENSP00000377447|ensembl:ENSP00000377478 intact:EBI-16469260 psi-mi:magac_human(display_long)|uniprotkb:MAGE-12 antigen(gene name synonym)|uniprotkb:MAGE12F antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.12(gene name synonym)|uniprotkb:MAGEA12(gene name)|psi-mi:MAGEA12(display_short)|uniprotkb:MAGE12(gene name synonym) psi-mi:a0a0s2z5a4_human(display_long)|uniprotkb:KIAA0907(gene name)|psi-mi:KIAA0907(display_short)|uniprotkb:KH homology domain-containing protein 4(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469336 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159858.1|refseq:NP_001159859.1|refseq:NP_005358.2|ensembl:ENSG00000213401(gene)|ensembl:ENST00000357916(transcript)|ensembl:ENST00000393869(transcript)|ensembl:ENST00000393900(transcript)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|entrezgene/locuslink:4111(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|interpro:IPR036612|interpro:IPR031121|entrezgene/locuslink:22889(identity) intact:EBI-16440322(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3/Jxz2VsFOb67RWqWj3xbTrw3s49606 rogid:DV9J710SOPNGaqeNv+Gpuyh0Mus9606 rigid:sWd4ZZwUdD0Cc53eKgU0JtB/aXU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O14964 intact:EBI-16431876 intact:EBI-740220|uniprotkb:Q9NR36|ensembl:ENSP00000331201|ensembl:ENSP00000504106 - psi-mi:hgs_human(display_long)|uniprotkb:Protein pp110(gene name synonym)|uniprotkb:Hrs(gene name synonym)|uniprotkb:HGS(gene name)|psi-mi:HGS(display_short)|uniprotkb:HRS(gene name synonym) psi-mi:"ccsb isoform id: krt6a_2"(display_short)|psi-mi:EBI-16431876(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469352 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004703.1|dip:DIP-29050N|ensembl:ENSG00000185359(gene)|ensembl:ENST00000329138(transcript)|ensembl:ENST00000676546(transcript)|go:"GO:0005764"(lysosome)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006622"(protein targeting to lysosome)|go:"GO:0007165"(signal transduction)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010324"(membrane invagination)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0016197"(endosomal transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030948"(negative regulation of vascular endothelial growth factor receptor signaling pathway)|go:"GO:0031901"(early endosome membrane)|go:"GO:0032585"(multivesicular body membrane)|go:"GO:0033565"(ESCRT-0 complex)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0036258"(multivesicular body assembly)|go:"GO:0042176"(regulation of protein catabolic process)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043405"(regulation of MAP kinase activity)|go:"GO:0044389"(ubiquitin-like protein ligase binding)|go:"GO:0046426"(negative regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072657"(protein localization to membrane)|go:"GO:0097013"(phagocytic vesicle lumen)|go:"GO:1903543"(positive regulation of exosomal secretion)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR002014(VHS)|interpro:IPR003903(Ubiquitin interacting motif)|interpro:IPR008942(ENTH/VHS)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017073(Ubiquitin binding protein, Hrs/VPS27)|interpro:IPR017455(Zinc finger, FYVE-related)|interpro:IPR024641|mint:O14964|rcsb pdb:2D3G|rcsb pdb:3F1I|rcsb pdb:3OBQ|rcsb pdb:3ZYQ|rcsb pdb:4AVX|reactome:R-HSA-182971|reactome:R-HSA-432720|reactome:R-HSA-5689880|reactome:R-HSA-6807004|reactome:R-HSA-8856825|reactome:R-HSA-8856828|reactome:R-HSA-8875360|reactome:R-HSA-9013420|reactome:R-HSA-917729|reactome:R-HSA-9635644|reactome:R-HSA-9636383|reactome:R-HSA-9706019|entrezgene/locuslink:9146(identity) entrezgene/locuslink:3853(identity) intact:EBI-16433891(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:z/AnREuqEpyJ9/Zj6JFCJCJem1I9606 rogid:yW9Icx0fchBmUxpcpz1lpDgBoy09606 rigid:VnT0TSCNeiYE5oreHYVbSzkXmj4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5JR59-3 uniprotkb:P02538 intact:EBI-11522433|ensembl:ENSP00000370186 intact:EBI-702198|uniprotkb:P48667|uniprotkb:Q08AR4|uniprotkb:Q6NT67|uniprotkb:Q96CL4|uniprotkb:A4QPC1|ensembl:ENSP00000369317 psi-mi:q5jr59-3(display_long)|uniprotkb:MTUS2(gene name)|psi-mi:MTUS2(display_short)|uniprotkb:CAZIP(gene name synonym)|uniprotkb:Cardiac zipper protein(gene name synonym)|uniprotkb:KIAA0774(gene name synonym)|uniprotkb:Microtubule plus-end tracking protein TIP150(gene name synonym)|uniprotkb:TIP150(gene name synonym) psi-mi:k2c6a_human(display_long)|uniprotkb:Cytokeratin-6A(gene name synonym)|uniprotkb:Keratin-6A(gene name synonym)|uniprotkb:Cytokeratin-6D(gene name synonym)|uniprotkb:KRT6A(gene name)|psi-mi:KRT6A(display_short)|uniprotkb:K6A(gene name synonym)|uniprotkb:KRT6D(gene name synonym)|uniprotkb:Type-II keratin Kb6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469368 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000132938(gene)|ensembl:ENST00000380808(transcript)|intact:EBI-742948(isoform-parent)|uniprotkb:Q5JR59-3(isoform-parent)|entrezgene/locuslink:23281(identity) refseq:NP_005545.1|dip:DIP-533N|ensembl:ENSG00000205420(gene)|ensembl:ENST00000330722(transcript)|go:"GO:0001899"(negative regulation of cytolysis by symbiont of host cells)|go:"GO:0002009"(morphogenesis of an epithelium)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0016020"(membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0042060"(wound healing)|go:"GO:0045095"(keratin filament)|go:"GO:0050830"(defense response to Gram-positive bacterium)|go:"GO:0051838"(cytolysis by host of symbiont cells)|go:"GO:0061844"(antimicrobial humoral immune response mediated by antimicrobial peptide)|go:"GO:0070062"(extracellular exosome)|go:"GO:2000536"(negative regulation of entry of bacterium into host cell)|interpro:IPR003054(Type II keratin)|interpro:IPR018039|interpro:IPR032444|interpro:IPR039008|mint:P02538|rcsb pdb:5KI0|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3853(identity) intact:EBI-16440858(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:npId9tC7VoLN/jteoBiRbSYChPs9606 rogid:feIxUFTSMnjattUda5vdGhiL9H89606 rigid:fBRLkKK7sK9U7JyNb2HH6XM9jms true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:Q13751 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-2529833|uniprotkb:O14947|uniprotkb:Q14733|uniprotkb:Q9UJK4|uniprotkb:Q9UJL1|uniprotkb:D3DT88|ensembl:ENSP00000348384|ensembl:ENSP00000355997|ensembl:ENSP00000375778 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:lamb3_human(display_long)|uniprotkb:Epiligrin subunit bata(gene name synonym)|uniprotkb:Kalinin subunit beta(gene name synonym)|uniprotkb:Nicein subunit beta(gene name synonym)|uniprotkb:LAMB3(gene name)|psi-mi:LAMB3(display_short)|uniprotkb:LAMNB1(gene name synonym)|uniprotkb:Laminin-5 subunit beta(gene name synonym)|uniprotkb:Laminin B1k chain(gene name synonym)|uniprotkb:Kalinin B1 chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469384 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) ensembl:ENSG00000196878(gene)|ensembl:ENST00000356082(transcript)|ensembl:ENST00000367030(transcript)|ensembl:ENST00000391911(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005201"(extracellular matrix structural constituent)|go:"GO:0005576"(extracellular region)|go:"GO:0005610"(laminin-5 complex)|go:"GO:0008544"(epidermis development)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0009888"(tissue development)|go:"GO:0016477"(cell migration)|go:"GO:0034446"(substrate adhesion-dependent cell spreading)|go:"GO:0035987"(endodermal cell differentiation)|go:"GO:0043256"(laminin complex)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0050873"(brown fat cell differentiation)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070831"(basement membrane assembly)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR002049(EGF-like, laminin)|interpro:IPR008211(Laminin, N-terminal)|mint:Q13751|reactome:R-HSA-1474228|reactome:R-HSA-2022090|reactome:R-HSA-2214320|reactome:R-HSA-3000157|reactome:R-HSA-3000171|reactome:R-HSA-446107|reactome:R-HSA-8874081|refseq:NP_000219.2|refseq:NP_001017402.1|refseq:NP_001121113.1|refseq:XP_005273181.1|entrezgene/locuslink:3914(identity) intact:EBI-16435134(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:sZg1IU7enqhMRqryIrBkYRSP8/k9606 rigid:zxam11yPBqnBQzywp8c8fPR4qCE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:I6L996 uniprotkb:A0A0S2Z3Y4 intact:EBI-10181089 intact:EBI-16469400 psi-mi:i6l996_human(display_long)|uniprotkb:PTK2(gene name)|psi-mi:PTK2(display_short) psi-mi:a0a0s2z3y4_human(display_long)|uniprotkb:LCK(gene name)|psi-mi:LCK(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469416 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR036137|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR005189(Focal adhesion targeting region)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR020635|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005925"(focal adhesion)|go:"GO:0007172"(signal complex assembly)|entrezgene/locuslink:5747(identity) go:"GO:0005886"(plasma membrane)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0004715"(non-membrane spanning protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|refseq:NP_001317397.1|interpro:IPR011009(Protein kinase-like)|interpro:IPR035850|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR020635|interpro:IPR035749|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:3932(identity) intact:EBI-16432436(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aHSFMTSzdwboAzFgymTQXp0AiP49606 rogid://TSM44HoapvCeNP+Vtuoiu+PlM9606 rigid:oV/7ntFsyUZVpM9MmJUPQn3SWNY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P23771 uniprotkb:P06239-3 intact:EBI-6664760|ensembl:ENSP00000341619|uniprotkb:Q5VWG7|uniprotkb:Q5VWG8|uniprotkb:Q96J16 intact:EBI-13287659|ensembl:ENSP00000328213 psi-mi:gata3_human(display_long)|uniprotkb:GATA3(gene name)|psi-mi:GATA3(display_short)|uniprotkb:GATA-binding factor 3(gene name synonym) psi-mi:p06239-3(display_long)|uniprotkb:LCK(gene name)|psi-mi:LCK(display_short)|uniprotkb:Leukocyte C-terminal Src kinase(gene name synonym)|uniprotkb:Lymphocyte cell-specific protein-tyrosine kinase(gene name synonym)|uniprotkb:Protein YT16(gene name synonym)|uniprotkb:Proto-oncogene Lck(gene name synonym)|uniprotkb:T cell-specific protein-tyrosine kinase(gene name synonym)|uniprotkb:p56-LCK(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469432 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000107485(gene)|ensembl:ENST00000346208(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001709"(cell fate determination)|go:"GO:0001764"(neuron migration)|go:"GO:0001806"(type IV hypersensitivity)|go:"GO:0001817"(regulation of cytokine production)|go:"GO:0001822"(kidney development)|go:"GO:0001823"(mesonephros development)|go:"GO:0002088"(lens development in camera-type eye)|go:"GO:0002520"(immune system development)|go:"GO:0002572"(pro-T cell differentiation)|go:"GO:0003180"(aortic valve morphogenesis)|go:"GO:0003215"(cardiac right ventricle morphogenesis)|go:"GO:0003281"(ventricular septum development)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005134"(interleukin-2 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006952"(defense response)|go:"GO:0006959"(humoral immune response)|go:"GO:0007165"(signal transduction)|go:"GO:0007411"(axon guidance)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0008584"(male gonad development)|go:"GO:0009615"(response to virus)|go:"GO:0009653"(anatomical structure morphogenesis)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0010595"(positive regulation of endothelial cell migration)|go:"GO:0010719"(negative regulation of epithelial to mesenchymal transition)|go:"GO:0010975"(regulation of neuron projection development)|go:"GO:0014065"(phosphatidylinositol 3-kinase signaling)|go:"GO:0030217"(T cell differentiation)|go:"GO:0030218"(erythrocyte differentiation)|go:"GO:0030856"(regulation of epithelial cell differentiation)|go:"GO:0031929"(TOR signaling)|go:"GO:0032689"(negative regulation of interferon-gamma production)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032736"(positive regulation of interleukin-13 production)|go:"GO:0032753"(positive regulation of interleukin-4 production)|go:"GO:0032754"(positive regulation of interleukin-5 production)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035162"(embryonic hemopoiesis)|go:"GO:0035457"(cellular response to interferon-alpha)|go:"GO:0035799"(ureter maturation)|go:"GO:0035898"(parathyroid hormone secretion)|go:"GO:0042421"(norepinephrine biosynthetic process)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0043370"(regulation of CD4-positive, alpha-beta T cell differentiation)|go:"GO:0043523"(regulation of neuron apoptotic process)|go:"GO:0043583"(ear development)|go:"GO:0043627"(response to estrogen)|go:"GO:0045061"(thymic T cell selection)|go:"GO:0045064"(T-helper 2 cell differentiation)|go:"GO:0045087"(innate immune response)|go:"GO:0045165"(cell fate commitment)|go:"GO:0045471"(response to ethanol)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0009791"(post-embryonic development)|go:"GO:0045599"(negative regulation of fat cell differentiation)|go:"GO:0045786"(negative regulation of cell cycle)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048469"(cell maturation)|go:"GO:0048485"(sympathetic nervous system development)|go:"GO:0048538"(thymus development)|go:"GO:0048568"(embryonic organ development)|go:"GO:0072178"(nephric duct morphogenesis)|go:"GO:0072179"(nephric duct formation)|go:"GO:0072182"(regulation of nephron tubule epithelial cell differentiation)|go:"GO:0072197"(ureter morphogenesis)|go:"GO:0072676"(lymphocyte migration)|go:"GO:0090102"(cochlea development)|go:"GO:1901536"(negative regulation of DNA demethylation)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:2000114"(regulation of establishment of cell polarity)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000352"(negative regulation of endothelial cell apoptotic process)|go:"GO:2000553"(positive regulation of T-helper 2 cell cytokine production)|go:"GO:2000607"(negative regulation of cell proliferation involved in mesonephros development)|go:"GO:2000611"(positive regulation of thyroid hormone generation)|go:"GO:2000617"(positive regulation of histone H3-K9 acetylation)|go:"GO:2000679"(positive regulation of transcription regulatory region DNA binding)|go:"GO:0072107"(positive regulation of ureteric bud formation)|go:"GO:2000703"(negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation)|go:"GO:2000734"(negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation)|interpro:IPR000679(Zinc finger, GATA-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR016374(Transcription factor, GATA-1/2/3)|interpro:IPR029521|interpro:IPR039355|rcsb pdb:4HC7|rcsb pdb:4HC9|rcsb pdb:4HCA|reactome:R-HSA-5689880|reactome:R-HSA-6785807|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-983231|go:"GO:2000683"(regulation of cellular response to X-ray)|go:"GO:0048646"(anatomical structure formation involved in morphogenesis)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060017"(parathyroid gland development)|go:"GO:0060037"(pharyngeal system development)|go:"GO:0060065"(uterus development)|go:"GO:0060231"(mesenchymal to epithelial transition)|go:"GO:0060374"(mast cell differentiation)|go:"GO:0060676"(ureteric bud formation)|go:"GO:0061085"(regulation of histone H3-K27 methylation)|go:"GO:0061290"(canonical Wnt signaling pathway involved in metanephric kidney development)|go:"GO:0070888"(E-box binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071442"(positive regulation of histone H3-K14 acetylation)|go:"GO:0071599"(otic vesicle development)|go:"GO:0071773"(cellular response to BMP stimulus)|go:"GO:0071837"(HMG box domain binding)|go:"GO:0048589"(developmental growth)|refseq:XP_005252499.1|refseq:XP_005252500.1|refseq:NP_001002295.1|refseq:NP_002042.1|dip:DIP-61302N|entrezgene/locuslink:2625(identity) uniprotkb:P06239-3(isoform-parent)|intact:EBI-1348(isoform-parent)|ensembl:ENSG00000182866(gene)|ensembl:ENST00000333070(transcript)|entrezgene/locuslink:3932(identity) intact:EBI-16433643(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CHTPVKH4qSR/pDIf/vMr+kChpzc9606 rogid:AhIzJ3C93NIaoYcShniBSfH0sAI9606 rigid:8dMore1eiVDxzMNBHygQh/w34dQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P23771 uniprotkb:A0A0S2Z3Y4 intact:EBI-6664760|ensembl:ENSP00000341619|uniprotkb:Q5VWG7|uniprotkb:Q5VWG8|uniprotkb:Q96J16 intact:EBI-16469400 psi-mi:gata3_human(display_long)|uniprotkb:GATA3(gene name)|psi-mi:GATA3(display_short)|uniprotkb:GATA-binding factor 3(gene name synonym) psi-mi:a0a0s2z3y4_human(display_long)|uniprotkb:LCK(gene name)|psi-mi:LCK(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469448 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000107485(gene)|ensembl:ENST00000346208(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001709"(cell fate determination)|go:"GO:0001764"(neuron migration)|go:"GO:0001806"(type IV hypersensitivity)|go:"GO:0001817"(regulation of cytokine production)|go:"GO:0001822"(kidney development)|go:"GO:0001823"(mesonephros development)|go:"GO:0002088"(lens development in camera-type eye)|go:"GO:0002520"(immune system development)|go:"GO:0002572"(pro-T cell differentiation)|go:"GO:0003180"(aortic valve morphogenesis)|go:"GO:0003215"(cardiac right ventricle morphogenesis)|go:"GO:0003281"(ventricular septum development)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005134"(interleukin-2 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006952"(defense response)|go:"GO:0006959"(humoral immune response)|go:"GO:0007165"(signal transduction)|go:"GO:0007411"(axon guidance)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0008584"(male gonad development)|go:"GO:0009615"(response to virus)|go:"GO:0009653"(anatomical structure morphogenesis)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0010595"(positive regulation of endothelial cell migration)|go:"GO:0010719"(negative regulation of epithelial to mesenchymal transition)|go:"GO:0010975"(regulation of neuron projection development)|go:"GO:0014065"(phosphatidylinositol 3-kinase signaling)|go:"GO:0030217"(T cell differentiation)|go:"GO:0030218"(erythrocyte differentiation)|go:"GO:0030856"(regulation of epithelial cell differentiation)|go:"GO:0031929"(TOR signaling)|go:"GO:0032689"(negative regulation of interferon-gamma production)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032736"(positive regulation of interleukin-13 production)|go:"GO:0032753"(positive regulation of interleukin-4 production)|go:"GO:0032754"(positive regulation of interleukin-5 production)|go:"GO:0033600"(negative regulation of mammary gland epithelial cell proliferation)|go:"GO:0035162"(embryonic hemopoiesis)|go:"GO:0035457"(cellular response to interferon-alpha)|go:"GO:0035799"(ureter maturation)|go:"GO:0035898"(parathyroid hormone secretion)|go:"GO:0042421"(norepinephrine biosynthetic process)|go:"GO:0042472"(inner ear morphogenesis)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0043370"(regulation of CD4-positive, alpha-beta T cell differentiation)|go:"GO:0043523"(regulation of neuron apoptotic process)|go:"GO:0043583"(ear development)|go:"GO:0043627"(response to estrogen)|go:"GO:0045061"(thymic T cell selection)|go:"GO:0045064"(T-helper 2 cell differentiation)|go:"GO:0045087"(innate immune response)|go:"GO:0045165"(cell fate commitment)|go:"GO:0045471"(response to ethanol)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0009791"(post-embryonic development)|go:"GO:0045599"(negative regulation of fat cell differentiation)|go:"GO:0045786"(negative regulation of cell cycle)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0009967"(positive regulation of signal transduction)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048469"(cell maturation)|go:"GO:0048485"(sympathetic nervous system development)|go:"GO:0048538"(thymus development)|go:"GO:0048568"(embryonic organ development)|go:"GO:0072178"(nephric duct morphogenesis)|go:"GO:0072179"(nephric duct formation)|go:"GO:0072182"(regulation of nephron tubule epithelial cell differentiation)|go:"GO:0072197"(ureter morphogenesis)|go:"GO:0072676"(lymphocyte migration)|go:"GO:0090102"(cochlea development)|go:"GO:1901536"(negative regulation of DNA demethylation)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|go:"GO:2000114"(regulation of establishment of cell polarity)|go:"GO:2000146"(negative regulation of cell motility)|go:"GO:2000352"(negative regulation of endothelial cell apoptotic process)|go:"GO:2000553"(positive regulation of T-helper 2 cell cytokine production)|go:"GO:2000607"(negative regulation of cell proliferation involved in mesonephros development)|go:"GO:2000611"(positive regulation of thyroid hormone generation)|go:"GO:2000617"(positive regulation of histone H3-K9 acetylation)|go:"GO:2000679"(positive regulation of transcription regulatory region DNA binding)|go:"GO:0072107"(positive regulation of ureteric bud formation)|go:"GO:2000703"(negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation)|go:"GO:2000734"(negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation)|interpro:IPR000679(Zinc finger, GATA-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR016374(Transcription factor, GATA-1/2/3)|interpro:IPR029521|interpro:IPR039355|rcsb pdb:4HC7|rcsb pdb:4HC9|rcsb pdb:4HCA|reactome:R-HSA-5689880|reactome:R-HSA-6785807|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-983231|go:"GO:2000683"(regulation of cellular response to X-ray)|go:"GO:0048646"(anatomical structure formation involved in morphogenesis)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0051897"(positive regulation of protein kinase B signaling)|go:"GO:0060017"(parathyroid gland development)|go:"GO:0060037"(pharyngeal system development)|go:"GO:0060065"(uterus development)|go:"GO:0060231"(mesenchymal to epithelial transition)|go:"GO:0060374"(mast cell differentiation)|go:"GO:0060676"(ureteric bud formation)|go:"GO:0061085"(regulation of histone H3-K27 methylation)|go:"GO:0061290"(canonical Wnt signaling pathway involved in metanephric kidney development)|go:"GO:0070888"(E-box binding)|go:"GO:0071353"(cellular response to interleukin-4)|go:"GO:0071356"(cellular response to tumor necrosis factor)|go:"GO:0071442"(positive regulation of histone H3-K14 acetylation)|go:"GO:0071599"(otic vesicle development)|go:"GO:0071773"(cellular response to BMP stimulus)|go:"GO:0071837"(HMG box domain binding)|go:"GO:0048589"(developmental growth)|refseq:XP_005252499.1|refseq:XP_005252500.1|refseq:NP_001002295.1|refseq:NP_002042.1|dip:DIP-61302N|entrezgene/locuslink:2625(identity) go:"GO:0005886"(plasma membrane)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0004715"(non-membrane spanning protein tyrosine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|refseq:NP_001317397.1|interpro:IPR011009(Protein kinase-like)|interpro:IPR035850|interpro:IPR000719(Protein kinase, core)|interpro:IPR001245(Tyrosine protein kinase)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR008266(Tyrosine protein kinase, active site)|interpro:IPR020635|interpro:IPR035749|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:3932(identity) intact:EBI-16433643(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CHTPVKH4qSR/pDIf/vMr+kChpzc9606 rogid://TSM44HoapvCeNP+Vtuoiu+PlM9606 rigid:mdFYt9kBXJiP1j9KmFxt0RSnGuU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:O75112-5 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-16469464|ensembl:ENSP00000485389 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:o75112-5(display_long)|uniprotkb:Protein cypher(gene name synonym)|uniprotkb:Z-band alternatively spliced PDZ-motif protein(gene name synonym)|uniprotkb:LDB3(gene name)|psi-mi:LDB3(display_short)|uniprotkb:KIAA0613(gene name synonym)|uniprotkb:ZASP(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469472 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) intact:EBI-1222667(isoform-parent)|ensembl:ENSG00000122367(gene)|ensembl:ENST00000623007(transcript)|entrezgene/locuslink:11155(identity) intact:EBI-16434013(see-also) - isoform-comment:"Variant in position: 315:R->C (in MFM-ZASP)." caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:27Yip0E8r+OuTAennn+6T2meYQE9606 rigid:vPaTJzDvRdvTrV/QkUu24/aBfaM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6UX01 uniprotkb:P43364 intact:EBI-8640839|ensembl:ENSP00000267102|uniprotkb:Q9NT09|intact:MINT-8163155|uniprotkb:Q969J4|uniprotkb:Q9NVE1|uniprotkb:Q9ULP6|uniprotkb:Q9NVU9|uniprotkb:Q96HN8|uniprotkb:Q96BY8 intact:EBI-739552|uniprotkb:Q5ETU4|uniprotkb:Q6ZRZ5|ensembl:ENSP00000347358 psi-mi:lmbrl_human(display_long)|uniprotkb:LMBR1L(gene name)|psi-mi:LMBR1L(display_short)|uniprotkb:KIAA1174(gene name synonym)|uniprotkb:LIMR(gene name synonym)|uniprotkb:Limb region 1 protein homolog-like(gene name synonym)|uniprotkb:Lipocalin-1-interacting membrane receptor(gene name synonym)|uniprotkb:UNQ458/PRO783(orf name) psi-mi:magab_human(display_long)|uniprotkb:MAGEA11(gene name)|psi-mi:MAGEA11(display_short)|uniprotkb:MAGE11(gene name synonym)|uniprotkb:MAGE-11 antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.11(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469488 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000139636(gene)|ensembl:ENST00000267102(transcript)|go:"GO:0004888"(transmembrane signaling receptor activity)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0007165"(signal transduction)|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030217"(T cell differentiation)|go:"GO:0042098"(T cell proliferation)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0070231"(T cell apoptotic process)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|interpro:IPR006876(LMBR1-like conserved region)|interpro:IPR008075(Lipocalin-1 receptor)|refseq:NP_001287679.1|refseq:NP_001287680.1|refseq:NP_060583.2|entrezgene/locuslink:55716(identity) refseq:NP_001011544.1|refseq:NP_005357.2|ensembl:ENSG00000185247(gene)|ensembl:ENST00000355220(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030099|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:P43364|rcsb pdb:6WJH|refseq:XP_016885010.1|refseq:XP_016885011.1|entrezgene/locuslink:4110(identity) intact:EBI-16434479(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:hPTmAiiZhDiXNLvPvM9io+B6Kqs9606 rogid:S0eOQssWhZCbAvWQCub2H+zQmzs9606 rigid:3PCjy4HhhiMVBtQMJFlGP8nC94E true - sufficient binding region:111-429 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43364 uniprotkb:A0A0S2Z5M5 intact:EBI-739552|uniprotkb:Q5ETU4|uniprotkb:Q6ZRZ5|ensembl:ENSP00000347358 intact:EBI-16469507 psi-mi:magab_human(display_long)|uniprotkb:MAGEA11(gene name)|psi-mi:MAGEA11(display_short)|uniprotkb:MAGE11(gene name synonym)|uniprotkb:MAGE-11 antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.11(gene name synonym) psi-mi:a0a0s2z5m5_human(display_long)|uniprotkb:LMBR1L(gene name)|psi-mi:LMBR1L(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469510 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001011544.1|refseq:NP_005357.2|ensembl:ENSG00000185247(gene)|ensembl:ENST00000355220(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030099|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:P43364|rcsb pdb:6WJH|refseq:XP_016885010.1|refseq:XP_016885011.1|entrezgene/locuslink:4110(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR008075(Lipocalin-1 receptor)|entrezgene/locuslink:55716(identity) intact:EBI-16434479(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S0eOQssWhZCbAvWQCub2H+zQmzs9606 rogid:VN/wMhanEGUoiY78scdDRr5a2Ys9606 rigid:36lT4Sak9mM0vbjcqzC+KRMoeYM true sufficient binding region:111-429 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43364 uniprotkb:Q6UX01-3 intact:EBI-739552|uniprotkb:Q5ETU4|uniprotkb:Q6ZRZ5|ensembl:ENSP00000347358 intact:EBI-16469529|ensembl:ENSP00000447329 psi-mi:magab_human(display_long)|uniprotkb:MAGEA11(gene name)|psi-mi:MAGEA11(display_short)|uniprotkb:MAGE11(gene name synonym)|uniprotkb:MAGE-11 antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.11(gene name synonym) psi-mi:q6ux01-3(display_long)|uniprotkb:Limb region 1 protein homolog-like(gene name synonym)|uniprotkb:Lipocalin-1-interacting membrane receptor(gene name synonym)|uniprotkb:UNQ458/PRO783(orf name)|uniprotkb:LMBR1L(gene name)|psi-mi:LMBR1L(display_short)|uniprotkb:KIAA1174(gene name synonym)|uniprotkb:LIMR(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469538 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001011544.1|refseq:NP_005357.2|ensembl:ENSG00000185247(gene)|ensembl:ENST00000355220(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030099|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:P43364|rcsb pdb:6WJH|refseq:XP_016885010.1|refseq:XP_016885011.1|entrezgene/locuslink:4110(identity) ensembl:ENSG00000139636(gene)|ensembl:ENST00000547382(transcript)|intact:EBI-8640839(isoform-parent)|entrezgene/locuslink:55716(identity) intact:EBI-16434479(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S0eOQssWhZCbAvWQCub2H+zQmzs9606 rogid:j+AtYdU3X6My8X28WV4PPrTgIXw9606 rigid:TxbwyjO2qdNc46eiRUBGaNqWL60 true sufficient binding region:111-429 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43364 intact:EBI-16469557 intact:EBI-739552|uniprotkb:Q5ETU4|uniprotkb:Q6ZRZ5|ensembl:ENSP00000347358 - psi-mi:magab_human(display_long)|uniprotkb:MAGEA11(gene name)|psi-mi:MAGEA11(display_short)|uniprotkb:MAGE11(gene name synonym)|uniprotkb:MAGE-11 antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.11(gene name synonym) psi-mi:"ccsb isoform id: lmbr1l_5"(display_short)|psi-mi:EBI-16469557(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469560 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001011544.1|refseq:NP_005357.2|ensembl:ENSG00000185247(gene)|ensembl:ENST00000355220(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030099|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:P43364|rcsb pdb:6WJH|refseq:XP_016885010.1|refseq:XP_016885011.1|entrezgene/locuslink:4110(identity) entrezgene/locuslink:55716(identity) intact:EBI-16434479(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S0eOQssWhZCbAvWQCub2H+zQmzs9606 rogid:zpgJSFTm9M5ifWUxZG6m5y5PJSc9606 rigid:MqUNjQLoc3UCaM8ajRag+KkciFM true sufficient binding region:111-429 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:O15116 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-347619|uniprotkb:B2R5E6|ensembl:ENSP00000310596 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:lsm1_human(display_long)|uniprotkb:LSM1(gene name)|psi-mi:LSM1(display_short)|uniprotkb:CASM(gene name synonym)|uniprotkb:Cancer-associated Sm-like(gene name synonym)|uniprotkb:Small nuclear ribonuclear CaSm(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469579 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) refseq:NP_055277.1|dip:DIP-31130N|ensembl:ENSG00000175324(gene)|ensembl:ENST00000311351(transcript)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000339"(RNA cap binding)|go:"GO:0000375"(RNA splicing, via transesterification reactions)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0016070"(RNA metabolic process)|go:"GO:0019827"(stem cell population maintenance)|go:"GO:0030424"(axon)|go:"GO:0030425"(dendrite)|go:"GO:0036002"(pre-mRNA binding)|go:"GO:0043025"(neuronal cell body)|go:"GO:0045665"(negative regulation of neuron differentiation)|go:"GO:0071044"(histone mRNA catabolic process)|go:"GO:1990124"(messenger ribonucleoprotein complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034104|interpro:IPR044642|reactome:R-HSA-430039|go:"GO:0000932"(P-body)|entrezgene/locuslink:27257(identity) intact:EBI-16434025(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:4ZjCoUTZoEAWqp5wvQDTcTr4gs49606 rigid:ylmuTENcglrvN8kvbbsELy/J0tc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z5P8 intact:EBI-16439278 intact:EBI-16469212 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z5p8_human(display_long)|uniprotkb:JMJD5(gene name)|psi-mi:JMJD5(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469219 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) interpro:IPR041667|refseq:XP_016879165.1|interpro:IPR003347(Transcription factor jumonji/aspartyl beta-hydroxylase)|interpro:IPR014710(RmlC-like jelly roll fold)|entrezgene/locuslink:79831(identity) intact:EBI-16439577(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:wBYujY+67BXE12wI+WLXxpSjeFU9606 rigid:prrEDH9RNJuC1bV1rgsFvceYnA0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NRG1 intact:EBI-16469675 intact:EBI-739759|uniprotkb:Q53HA7|uniprotkb:Q59EL9|uniprotkb:Q5VV18|uniprotkb:Q5VV20|uniprotkb:B7Z1Z3|ensembl:ENSP00000318602 - psi-mi:prdc1_human(display_long)|uniprotkb:PRTFDC1(gene name)|psi-mi:PRTFDC1(display_short)|uniprotkb:HHGP(gene name synonym) psi-mi:"ccsb isoform id: mcmbp_3"(display_short)|psi-mi:EBI-16469675(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469694 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001269715.1|refseq:NP_064585.1|ensembl:ENSG00000099256(gene)|ensembl:ENST00000320152(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0006166"(purine ribonucleoside salvage)|go:"GO:0042803"(protein homodimerization activity)|interpro:IPR000836(Phosphoribosyltransferase)|interpro:IPR005904(Hypoxanthine phosphoribosyl transferase)|interpro:IPR029057|rcsb pdb:2JBH|entrezgene/locuslink:56952(identity) entrezgene/locuslink:79892(identity) intact:EBI-16433217(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:grTZnSalFILRSeeZBjM1mTtF0xo9606 rogid:jlwzNIgLbSOvwlOEzQbiAfIAaM89606 rigid:47oIqZDLyHmWxpqlk0PzyxDGFKQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P04424 intact:EBI-16469675 intact:EBI-750131|uniprotkb:Q6LDS5|uniprotkb:Q96HS2|uniprotkb:E7EMI0|uniprotkb:E9PE48|ensembl:ENSP00000307188|ensembl:ENSP00000378741 - psi-mi:arly_human(display_long)|uniprotkb:Arginosuccinase(gene name synonym)|uniprotkb:ASL(gene name)|psi-mi:ASL(display_short) psi-mi:"ccsb isoform id: mcmbp_3"(display_short)|psi-mi:EBI-16469675(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469678 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000039.2|refseq:NP_001020114.1|refseq:NP_001020115.1|ensembl:ENSG00000126522(gene)|ensembl:ENST00000304874(transcript)|ensembl:ENST00000395332(transcript)|go:"GO:0000050"(urea cycle)|go:"GO:0004056"(argininosuccinate lyase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0042450"(arginine biosynthetic process via ornithine)|go:"GO:0042802"(identical protein binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000362(Fumarate lyase)|interpro:IPR008948(L-Aspartase-like)|interpro:IPR009049(Argininosuccinate lyase)|interpro:IPR020557|interpro:IPR022761|interpro:IPR024083|interpro:IPR029419|rcsb pdb:1AOS|rcsb pdb:1K62|reactome:R-HSA-70635|entrezgene/locuslink:435(identity) entrezgene/locuslink:79892(identity) intact:EBI-16433007(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/jjoPEHb9KDFHkiMHccy73q2dGc9606 rogid:jlwzNIgLbSOvwlOEzQbiAfIAaM89606 rigid:o22mfKaQ3PC/gBanelJQGN7quF8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NYB9-2 uniprotkb:P33993 intact:EBI-11096309|ensembl:ENSP00000261017 intact:EBI-355924|uniprotkb:Q15076|uniprotkb:Q96D34|uniprotkb:Q96GL1|uniprotkb:A4D2A1|uniprotkb:A4D2A2|uniprotkb:E9PGN9|ensembl:ENSP00000307288 psi-mi:q9nyb9-2(display_long)|uniprotkb:ABI2(gene name)|psi-mi:ABI2(display_short)|uniprotkb:ARGBPIA(gene name synonym)|uniprotkb:Abelson interactor 2(gene name synonym)|uniprotkb:Abl-binding protein 3(gene name synonym)|uniprotkb:Arg-binding protein 1(gene name synonym) psi-mi:mcm7_human(display_long)|uniprotkb:MCM7(gene name)|psi-mi:MCM7(display_short)|uniprotkb:CDC47(gene name synonym)|uniprotkb:MCM2(gene name synonym)|uniprotkb:CDC47 homolog(gene name synonym)|uniprotkb:P1.1-MCM3(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469659 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-743598(isoform-parent)|ensembl:ENSG00000138443(gene)|ensembl:ENST00000261017(transcript)|uniprotkb:Q9NYB9-2(isoform-parent)|entrezgene/locuslink:10152(identity) refseq:NP_001265524.1|refseq:NP_005907.3|refseq:NP_877577.1|ensembl:ENSG00000166508(gene)|ensembl:ENST00000303887(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0016020"(membrane)|go:"GO:0042325"(regulation of phosphorylation)|go:"GO:0042493"|go:"GO:0042555"(MCM complex)|go:"GO:0071162"(CMG complex)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071466"(cellular response to xenobiotic stimulus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001208(MCM)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006260"(DNA replication)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008283"(cell population proliferation)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008050(MCM protein 7)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018525|interpro:IPR027417|interpro:IPR027925|interpro:IPR031327|interpro:IPR033762|interpro:IPR041562|mint:P33993|rcsb pdb:6XTX|rcsb pdb:6XTY|reactome:R-HSA-176187|reactome:R-HSA-176974|reactome:R-HSA-68867|reactome:R-HSA-68949|reactome:R-HSA-68962|reactome:R-HSA-69052|dip:DIP-27580N|entrezgene/locuslink:4176(identity) intact:EBI-16438686(see-also) - - comment:"Evidence for isoform CCSB isoform ID: MCM7_1 expression is provided in figureS2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VNi9aUeavD8+CCi+n1DXS+7mmbs9606 rogid:hrpCntkzdVgewNA+/iPS6b50dGY9606 rigid:UKrOJI8cGWl4ds7kKhcu/4qAO38 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BTE3-2 intact:EBI-16431221 intact:EBI-9384556|ensembl:ENSP00000358073 - psi-mi:q9bte3-2(display_long)|uniprotkb:MCMBP(gene name)|psi-mi:MCMBP(display_short)|uniprotkb:C10orf119(gene name synonym) psi-mi:"ccsb isoform id: mcm7_2"(display_short)|psi-mi:EBI-16431221(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469643 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-749378(isoform-parent)|uniprotkb:Q9BTE3-2(isoform-parent)|ensembl:ENSG00000197771(gene)|ensembl:ENST00000369077(transcript)|entrezgene/locuslink:79892(identity) entrezgene/locuslink:4176(identity) intact:EBI-16435274(see-also) - - comment:"Evidence for isoform CCSB isoform ID: MCM7_2 expression is provided in figureS2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nJOq6jis1maK+M/X0TcR44HlxRw9606 rogid:SqFBX8NXgEirtGEAtrDOEdPxPU89606 rigid:dIXZQfAFmfMP0OZbwm7bvY/ZzL0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NQM4 uniprotkb:P33993 intact:EBI-10239299|uniprotkb:Q86WE1|uniprotkb:D3DUX5|ensembl:ENSP00000337757|ensembl:ENSP00000361531|ensembl:ENSP00000441930 intact:EBI-355924|uniprotkb:Q15076|uniprotkb:Q96D34|uniprotkb:Q96GL1|uniprotkb:A4D2A1|uniprotkb:A4D2A2|uniprotkb:E9PGN9|ensembl:ENSP00000307288 psi-mi:daaf6_human(display_long)|uniprotkb:DNAAF6(gene name)|psi-mi:DNAAF6(display_short)|uniprotkb:CXorf41(gene name synonym)|uniprotkb:PIH1 domain-containing protein 3(gene name synonym)|uniprotkb:PIH1D3(gene name synonym)|uniprotkb:Sarcoma antigen NY-SAR-97(gene name synonym) psi-mi:mcm7_human(display_long)|uniprotkb:MCM7(gene name)|psi-mi:MCM7(display_short)|uniprotkb:CDC47(gene name synonym)|uniprotkb:MCM2(gene name synonym)|uniprotkb:CDC47 homolog(gene name synonym)|uniprotkb:P1.1-MCM3(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469627 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001162625.1|refseq:NP_775765.1|refseq:XP_011529157.1|ensembl:ENSG00000080572(gene)|ensembl:ENST00000336387(transcript)|ensembl:ENST00000372453(transcript)|ensembl:ENST00000535523(transcript)|go:"GO:0003341"(cilium movement)|go:"GO:0005737"(cytoplasm)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0030317"(flagellated sperm motility)|go:"GO:0036158"(outer dynein arm assembly)|go:"GO:0036159"(inner dynein arm assembly)|go:"GO:0045505"(dynein intermediate chain binding)|go:"GO:0051087"(chaperone binding)|go:"GO:0070286"(axonemal dynein complex assembly)|interpro:IPR026697|interpro:IPR041442|entrezgene/locuslink:139212(identity) refseq:NP_001265524.1|refseq:NP_005907.3|refseq:NP_877577.1|ensembl:ENSG00000166508(gene)|ensembl:ENST00000303887(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0016020"(membrane)|go:"GO:0042325"(regulation of phosphorylation)|go:"GO:0042493"|go:"GO:0042555"(MCM complex)|go:"GO:0071162"(CMG complex)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071466"(cellular response to xenobiotic stimulus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001208(MCM)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006260"(DNA replication)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008283"(cell population proliferation)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008050(MCM protein 7)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018525|interpro:IPR027417|interpro:IPR027925|interpro:IPR031327|interpro:IPR033762|interpro:IPR041562|mint:P33993|rcsb pdb:6XTX|rcsb pdb:6XTY|reactome:R-HSA-176187|reactome:R-HSA-176974|reactome:R-HSA-68867|reactome:R-HSA-68949|reactome:R-HSA-68962|reactome:R-HSA-69052|dip:DIP-27580N|entrezgene/locuslink:4176(identity) intact:EBI-16434369(see-also) - - comment:"Evidence for isoform CCSB isoform ID: MCM7_1 expression is provided in figureS2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9mwmzVB9qiOuJQxcSddINet79iE9606 rogid:hrpCntkzdVgewNA+/iPS6b50dGY9606 rigid:ai4LQIpw9uje25/3lxDN6Y4qQ1U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43360 uniprotkb:P33993 intact:EBI-1045155|uniprotkb:A8IF93|uniprotkb:Q6NW44|ensembl:ENSP00000329199|ensembl:ENSP00000480637 intact:EBI-355924|uniprotkb:Q15076|uniprotkb:Q96D34|uniprotkb:Q96GL1|uniprotkb:A4D2A1|uniprotkb:A4D2A2|uniprotkb:E9PGN9|ensembl:ENSP00000307288 psi-mi:maga6_human(display_long)|uniprotkb:MAGE-6 antigen(gene name synonym)|uniprotkb:MAGE3B antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.6(gene name synonym)|uniprotkb:MAGEA6(gene name)|psi-mi:MAGEA6(display_short)|uniprotkb:MAGE6(gene name synonym) psi-mi:mcm7_human(display_long)|uniprotkb:MCM7(gene name)|psi-mi:MCM7(display_short)|uniprotkb:CDC47(gene name synonym)|uniprotkb:MCM2(gene name synonym)|uniprotkb:CDC47 homolog(gene name synonym)|uniprotkb:P1.1-MCM3(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469611 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005354.1|refseq:NP_787064.1|ensembl:ENSG00000197172(gene)|ensembl:ENST00000329342(transcript)|ensembl:ENST00000616035(transcript)|go:"GO:0010507"(negative regulation of autophagy)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030097|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|entrezgene/locuslink:4105(identity) refseq:NP_001265524.1|refseq:NP_005907.3|refseq:NP_877577.1|ensembl:ENSG00000166508(gene)|ensembl:ENST00000303887(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0016020"(membrane)|go:"GO:0042325"(regulation of phosphorylation)|go:"GO:0042493"|go:"GO:0042555"(MCM complex)|go:"GO:0071162"(CMG complex)|go:"GO:0071364"(cellular response to epidermal growth factor stimulus)|go:"GO:0071466"(cellular response to xenobiotic stimulus)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001208(MCM)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006260"(DNA replication)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008283"(cell population proliferation)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008050(MCM protein 7)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018525|interpro:IPR027417|interpro:IPR027925|interpro:IPR031327|interpro:IPR033762|interpro:IPR041562|mint:P33993|rcsb pdb:6XTX|rcsb pdb:6XTY|reactome:R-HSA-176187|reactome:R-HSA-176974|reactome:R-HSA-68867|reactome:R-HSA-68949|reactome:R-HSA-68962|reactome:R-HSA-69052|dip:DIP-27580N|entrezgene/locuslink:4176(identity) intact:EBI-16431223(see-also) - - comment:"Evidence for isoform CCSB isoform ID: MCM7_1 expression is provided in figureS2B."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Ag4IF8+k8aF+zuiB7NwjRrGGH6E9606 rogid:hrpCntkzdVgewNA+/iPS6b50dGY9606 rigid:MXP+YjwUgwSzlYx7BcLr7pVYGAA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P62310 intact:EBI-16434023 intact:EBI-348239|ensembl:ENSP00000302160|uniprotkb:Q9Y4Z1|uniprotkb:Q6IAH0 - psi-mi:lsm3_human(display_long)|uniprotkb:MDS017(orf name)|uniprotkb:LSM3(gene name)|psi-mi:LSM3(display_short) psi-mi:"ccsb isoform id: lsm1_3"(display_short)|psi-mi:EBI-16434023(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469595 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000170860(gene)|ensembl:ENST00000306024(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005829"(cytosol)|go:"GO:0006397"(mRNA processing)|go:"GO:0030629"(U6 snRNA 3'-end binding)|go:"GO:0033962"(P-body assembly)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0120115"(Lsm2-8 complex)|go:"GO:0071005"(U2-type precatalytic spliceosome)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034105|interpro:IPR040002|mint:P62310|rcsb pdb:3JCR|rcsb pdb:5O9Z|rcsb pdb:6AH0|rcsb pdb:6AHD|rcsb pdb:6QW6|rcsb pdb:6QX9|rcsb pdb:7ABG|reactome:R-HSA-430039|reactome:R-HSA-72163|refseq:NP_055278.1|dip:DIP-31218N|entrezgene/locuslink:27258(identity) entrezgene/locuslink:27257(identity) intact:EBI-16436871(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+OnRI9eJcsd1xJe+cUCP7Y/9tt09606 rogid:0XwAa+GObi6yt/UTcyBxxvUrqW09606 rigid:+08TQ0rQJoHqBsOS+S63ewpE1u4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:Q02078-6 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-16437973|ensembl:ENSP00000337202|ensembl:ENSP00000453441 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:q02078-6(display_long)|uniprotkb:Serum response factor-like protein 1(gene name synonym)|uniprotkb:MEF2A(gene name)|psi-mi:MEF2A(display_short)|uniprotkb:MEF2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469710 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) ensembl:ENSG00000068305(gene)|ensembl:ENST00000338042(transcript)|ensembl:ENST00000557785(transcript)|intact:EBI-2656305(isoform-parent)|entrezgene/locuslink:4205(identity) intact:EBI-16431407(see-also) - isoform-comment:No experimental confirmation available. Contains a phosphoserine at position 98. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:amqLoUTbFoxuByvSeiZrS7zXJRc9606 rigid:I/4qsh5j5GiGjRPFEPIVkcP/OzM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13164 intact:EBI-16469726 intact:EBI-1213983|uniprotkb:Q16634|uniprotkb:Q59F50|uniprotkb:Q6QLU7|uniprotkb:Q7L4P4|uniprotkb:Q969G1|uniprotkb:Q96G51|intact:EBI-28979986|ensembl:ENSP00000311005|ensembl:ENSP00000378966|ensembl:ENSP00000378968 - psi-mi:mk07_human(display_long)|uniprotkb:MAPK7(gene name)|psi-mi:MAPK7(display_short)|uniprotkb:BMK1(gene name synonym)|uniprotkb:ERK5(gene name synonym)|uniprotkb:PRKM7(gene name synonym)|uniprotkb:Extracellular signal-regulated kinase 5(gene name synonym)|uniprotkb:Big MAP kinase 1(gene name synonym) psi-mi:"ccsb isoform id: mef2a_5"(display_short)|psi-mi:EBI-16469726(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469729 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002740.2|refseq:NP_620601.1|refseq:NP_620602.2|refseq:NP_620603.2|ensembl:ENST00000299612|ensembl:ENSP00000299612|ensembl:ENSP00000311005|ensembl:ENSP00000378966|ensembl:ENSP00000378968|refseq:XP_011522259.1|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0045765"(regulation of angiogenesis)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050728"(negative regulation of inflammatory response)|go:"GO:0051019"(mitogen-activated protein kinase binding)|go:"GO:0051247"(positive regulation of protein metabolic process)|go:"GO:0051344"(negative regulation of cyclic-nucleotide phosphodiesterase activity)|go:"GO:0060761"(negative regulation of response to cytokine stimulus)|go:"GO:0070301"(cellular response to hydrogen peroxide)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|go:"GO:0071363"(cellular response to growth factor stimulus)|go:"GO:0071499"(cellular response to laminar fluid shear stress)|go:"GO:0071560"(cellular response to transforming growth factor beta stimulus)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1902176"(negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|go:"GO:2000352"(negative regulation of endothelial cell apoptotic process)|go:"GO:2001240"(negative regulation of extrinsic apoptotic signaling pathway in absence of ligand)|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|mint:Q13164|rcsb pdb:2Q8Y|rcsb pdb:4B99|rcsb pdb:4IC7|rcsb pdb:4IC8|rcsb pdb:4ZSG|rcsb pdb:4ZSJ|rcsb pdb:4ZSL|rcsb pdb:5BYY|rcsb pdb:5BYZ|rcsb pdb:5O7I|rcsb pdb:6HKM|rcsb pdb:6HKN|reactome:R-HSA-198753|reactome:R-HSA-198765|reactome:R-HSA-202670|reactome:R-HSA-2559582|reactome:R-HSA-881907|reactome:R-HSA-8853659|ensembl:ENSG00000166484(gene)|ensembl:ENST00000308406(transcript)|ensembl:ENST00000395602(transcript)|ensembl:ENST00000395604(transcript)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007049"(cell cycle)|go:"GO:0007165"(signal transduction)|go:"GO:0016605"(PML body)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030154"(cell differentiation)|go:"GO:0034115"(negative regulation of heterotypic cell-cell adhesion)|entrezgene/locuslink:5598(identity) entrezgene/locuslink:4205(identity) intact:EBI-16437979(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dUTMnlgdjEkFhq0i6RmvpX5U7BM9606 rogid:Zyb8qTETXCdDyqhP6DLA9B0ZWyU9606 rigid:q8nRbJJ6IilcNnrH6E4vFcgWhKM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 intact:EBI-16469745 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 - psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469748 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) entrezgene/locuslink:64745(identity) intact:EBI-16429183(see-also)|intact:EBI-16429193(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:c+4pheGSd14rM4+J6fXYk3Kem9c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 intact:EBI-16469745 intact:EBI-10172526|ensembl:ENSP00000413976 - psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469765 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) entrezgene/locuslink:64745(identity) intact:EBI-16429468(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:oCPVLDzjCDnJhJohx2tDLNvaj4w true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13077 intact:EBI-16469745 intact:EBI-359224|uniprotkb:Q658U1|uniprotkb:Q8NF13|uniprotkb:B4DJ77|ensembl:ENSP00000362994|ensembl:ENSP00000443183 - psi-mi:traf1_human(display_long)|uniprotkb:TRAF1(gene name)|psi-mi:TRAF1(display_short)|uniprotkb:EBI6(gene name synonym)|uniprotkb:Epstein-Barr virus-induced protein 6(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469784 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177874.1|refseq:NP_001177876.1|refseq:NP_005649.1|dip:DIP-27514N|ensembl:ENSG00000056558(gene)|ensembl:ENST00000373887(transcript)|ensembl:ENST00000540010(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:2001236"(regulation of extrinsic apoptotic signaling pathway)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR027136|interpro:IPR032070|interpro:IPR037306|interpro:IPR043211|mint:Q13077|rcsb pdb:3M0D|rcsb pdb:5E1T|rcsb pdb:5H10|reactome:R-HSA-5357905|reactome:R-HSA-5357956|entrezgene/locuslink:7185(identity) entrezgene/locuslink:64745(identity) intact:EBI-16430823(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:D51RV1gTNQQjGP978+uv98Hd3Lc9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:+pV9nU6WznCfgBsxc2xb08a0HdE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 intact:EBI-16469745 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 - psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469800 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) entrezgene/locuslink:64745(identity) intact:EBI-16432238(see-also)|intact:EBI-16432248(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:/Fl+Uydtdbu/uiwOEptFbxB178k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NA61-2 intact:EBI-16469745 intact:EBI-11524851|ensembl:ENSP00000368249|ensembl:ENSP00000480148 - psi-mi:q8na61-2(display_long)|uniprotkb:CBY2(gene name)|psi-mi:CBY2(display_short)|uniprotkb:SPERT(gene name synonym)|uniprotkb:Spermatid-associated protein(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469817 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-741724(isoform-parent)|ensembl:ENSG00000174015(gene)|ensembl:ENST00000378966(transcript)|ensembl:ENST00000610924(transcript)|uniprotkb:Q8NA61-2(isoform-parent)|entrezgene/locuslink:220082(identity) entrezgene/locuslink:64745(identity) intact:EBI-16432374(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SogYcXGGMYRYzB9xKC5o0pEtsDs9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:2pQI36dP6mTQO95RlD+F8DWxi9s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NA61-2 uniprotkb:Q9H7H0 intact:EBI-11524851|ensembl:ENSP00000368249|ensembl:ENSP00000480148 intact:EBI-749353|intact:EBI-948255|uniprotkb:Q9BSH1|uniprotkb:Q9BZH2|uniprotkb:Q9BZH3|ensembl:ENSP00000343041 psi-mi:q8na61-2(display_long)|uniprotkb:CBY2(gene name)|psi-mi:CBY2(display_short)|uniprotkb:SPERT(gene name synonym)|uniprotkb:Spermatid-associated protein(gene name synonym) psi-mi:met17_human(display_long)|uniprotkb:METT11D1(gene name synonym)|uniprotkb:Protein RSM22 homolog, mitochondrial(gene name synonym)|uniprotkb:METTL17(gene name)|psi-mi:METTL17(display_short)|uniprotkb:Methyltransferase 11 domain-containing protein 1(gene name synonym)|uniprotkb:False p73 target gene protein(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469833 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-741724(isoform-parent)|ensembl:ENSG00000174015(gene)|ensembl:ENST00000378966(transcript)|ensembl:ENST00000610924(transcript)|uniprotkb:Q8NA61-2(isoform-parent)|entrezgene/locuslink:220082(identity) refseq:NP_001025162.1|refseq:NP_073571.1|ensembl:ENSG00000165792(gene)|ensembl:ENST00000339374(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006412"(translation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:1904047"(S-adenosyl-L-methionine binding)|interpro:IPR015324(Ribosomal protein Rsm22, bacterial-type)|interpro:IPR029063|mint:Q9H7H0|entrezgene/locuslink:64745(identity) intact:EBI-16432374(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SogYcXGGMYRYzB9xKC5o0pEtsDs9606 rogid:RAj8jOqwthd7a0Xzi5FWhVKc8OI9606 rigid:5sB+y8Q6ab17+OOk+oAn/zIJcww true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 intact:EBI-16469745 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 - psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469849 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) entrezgene/locuslink:64745(identity) intact:EBI-16433057(see-also)|intact:EBI-16433067(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:APpXW2U8lKd9qXsNeDYVnZbcjLA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 intact:EBI-16469745 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 - psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469866 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) entrezgene/locuslink:64745(identity) intact:EBI-16435144(see-also)|intact:EBI-16435154(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:BGoFHOIeIMEYX0Hpv1Ro1DzAAgE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 intact:EBI-16469745 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 - psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469883 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) entrezgene/locuslink:64745(identity) intact:EBI-16436091(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:dQ4U+TGlgqigz4PY5SEwdD3l05I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 intact:EBI-16469745 intact:EBI-16439278 - psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:"ccsb isoform id: mettl17_2"(display_short)|psi-mi:EBI-16469745(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469899 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) entrezgene/locuslink:64745(identity) intact:EBI-16439599(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:uT1dtTkdfrpZul27BTW+kR8NpBg9606 rigid:yQrUCLhR275/2NMgWMcRth7S6/s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q9H7H0 intact:EBI-16439278 intact:EBI-749353|intact:EBI-948255|uniprotkb:Q9BSH1|uniprotkb:Q9BZH2|uniprotkb:Q9BZH3|ensembl:ENSP00000343041 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:met17_human(display_long)|uniprotkb:METT11D1(gene name synonym)|uniprotkb:Protein RSM22 homolog, mitochondrial(gene name synonym)|uniprotkb:METTL17(gene name)|psi-mi:METTL17(display_short)|uniprotkb:Methyltransferase 11 domain-containing protein 1(gene name synonym)|uniprotkb:False p73 target gene protein(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469915 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:NP_001025162.1|refseq:NP_073571.1|ensembl:ENSG00000165792(gene)|ensembl:ENST00000339374(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006412"(translation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:1904047"(S-adenosyl-L-methionine binding)|interpro:IPR015324(Ribosomal protein Rsm22, bacterial-type)|interpro:IPR029063|mint:Q9H7H0|entrezgene/locuslink:64745(identity) intact:EBI-16439599(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:RAj8jOqwthd7a0Xzi5FWhVKc8OI9606 rigid:20mDHO3cOxGtL6l+081R7o7eaT4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H892-2 uniprotkb:A0A0S2Z5W4 intact:EBI-10274410|ensembl:ENSP00000315160|ensembl:ENSP00000435291 intact:EBI-16469931 psi-mi:q9h892-2(display_long)|uniprotkb:TTC12(gene name)|psi-mi:TTC12(display_short) psi-mi:a0a0s2z5w4_human(display_long)|uniprotkb:MIPOL1(gene name)|psi-mi:MIPOL1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469937 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000149292(gene)|ensembl:ENST00000314756(transcript)|ensembl:ENST00000494714(transcript)|intact:EBI-2548354(isoform-parent)|uniprotkb:Q9H892-2(isoform-parent)|entrezgene/locuslink:54970(identity) interpro:IPR026175|entrezgene/locuslink:145282(identity) intact:EBI-16440740(see-also) isoform-comment:May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OEjSVGC92wY/pn1l/B1t3wDa3s89606 rogid:3ejDpH+ibC5NXUABPjgilPVDuOA9606 rigid:01j3he4KV8yuWO6WFv9Jckhm0Ns true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H892-2 uniprotkb:A0A0S2Z674 intact:EBI-10274410|ensembl:ENSP00000315160|ensembl:ENSP00000435291 intact:EBI-16469953 psi-mi:q9h892-2(display_long)|uniprotkb:TTC12(gene name)|psi-mi:TTC12(display_short) psi-mi:a0a0s2z674_human(display_long)|uniprotkb:MIPOL1(gene name)|psi-mi:MIPOL1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469959 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000149292(gene)|ensembl:ENST00000314756(transcript)|ensembl:ENST00000494714(transcript)|intact:EBI-2548354(isoform-parent)|uniprotkb:Q9H892-2(isoform-parent)|entrezgene/locuslink:54970(identity) interpro:IPR026175|entrezgene/locuslink:145282(identity) intact:EBI-16440740(see-also) isoform-comment:May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OEjSVGC92wY/pn1l/B1t3wDa3s89606 rogid:W+FeO28V8BN0eE1ebJT62PET4eQ9606 rigid:svcsSDHSgwkryM2lgzWuJbqTeEQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P43364 intact:EBI-16439609 intact:EBI-739552|uniprotkb:Q5ETU4|uniprotkb:Q6ZRZ5|ensembl:ENSP00000347358 - psi-mi:magab_human(display_long)|uniprotkb:MAGEA11(gene name)|psi-mi:MAGEA11(display_short)|uniprotkb:MAGE11(gene name synonym)|uniprotkb:MAGE-11 antigen(gene name synonym)|uniprotkb:Cancer/testis antigen 1.11(gene name synonym) psi-mi:"ccsb isoform id: mlf1_5"(display_short)|psi-mi:EBI-16439609(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469975 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001011544.1|refseq:NP_005357.2|ensembl:ENSG00000185247(gene)|ensembl:ENST00000355220(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016604"(nuclear body)|interpro:IPR002190(MAGE protein)|interpro:IPR021072|interpro:IPR030099|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:P43364|rcsb pdb:6WJH|refseq:XP_016885010.1|refseq:XP_016885011.1|entrezgene/locuslink:4110(identity) entrezgene/locuslink:4291(identity) intact:EBI-16434491(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S0eOQssWhZCbAvWQCub2H+zQmzs9606 rogid:ZMtj2W+VOGl/FinhPqOSkd7clFg9606 rigid:RuwsOkEq4H9Sz3fz+9GZhyWyRYM true sufficient binding region:111-429 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:P58340 intact:EBI-16439278 intact:EBI-721328|intact:EBI-767466|uniprotkb:E9PEU9|uniprotkb:Q2TLE5|uniprotkb:Q8N8F8|uniprotkb:Q96MH1|uniprotkb:Q2TLE3|ensembl:ENSP00000348157 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:mlf1_human(display_long)|uniprotkb:Myelodysplasia-myeloid leukemia factor 1(gene name synonym)|uniprotkb:MLF1(gene name)|psi-mi:MLF1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16469994 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:NP_071888.1|refseq:NP_001182361.1|refseq:NP_001182362.1|refseq:NP_001182363.1|refseq:XP_011511154.1|refseq:NP_001123628.1|refseq:NP_001123629.1|ensembl:ENSP00000348157|ensembl:ENST00000359117|ensembl:ENSP00000352025|ensembl:ENST00000392822|ensembl:ENSP00000376568|ensembl:ENST00000469452|ensembl:ENSP00000418595|ensembl:ENST00000471745|ensembl:ENSP00000420134|ensembl:ENST00000477042|ensembl:ENSP00000419637|ensembl:ENST00000478894|ensembl:ENSP00000417777|ensembl:ENST00000482628|ensembl:ENSP00000417141|ensembl:ENST00000484955|ensembl:ENSP00000417835|ensembl:ENST00000618075|ensembl:ENSP00000484169|ensembl:ENST00000651874|ensembl:ENSP00000498363|refseq:XP_011511155.1|refseq:XP_005247537.1|ensembl:ENSG00000178053(gene)|ensembl:ENST00000355893(transcript)|go:"GO:0002318"(myeloid progenitor cell differentiation)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005929"(cilium)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007049"(cell cycle)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0036064"(ciliary basal body)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR019376|rcsb pdb:3UAL|rcsb pdb:3UBW|rcsb pdb:6Y8E|entrezgene/locuslink:4291(identity) intact:EBI-16439611(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:czY64xaocTjgRFAtZU19jvH4MIo9606 rigid:sFu5Ult2L5Eh5EF0jhwiWPkqwFs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z414 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16470010 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z414_human(display_long)|uniprotkb:MNAT1(gene name)|psi-mi:MNAT1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470013 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0005694"(chromosome)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR003511(DNA-binding HORMA)|interpro:IPR036570|entrezgene/locuslink:4331(identity) intact:EBI-16438504(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:A3QD1f7tkTcEwQiMnqHb9RjcmYQ9606 rigid:KtcEI8qUAWlXyqSkM6pgDWn5kmI true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16434391 uniprotkb:Q13875-3 - intact:EBI-12013470|ensembl:ENSP00000373261|ensembl:ENSP00000388148|ensembl:ENSP00000401312|ensembl:ENSP00000405549|ensembl:ENSP00000409730 psi-mi:"ccsb orf id: 4214"(display_short)|psi-mi:EBI-16434391(display_long) psi-mi:q13875-3(display_long)|uniprotkb:MOBP(gene name)|psi-mi:MOBP(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470032 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:51322(identity) intact:EBI-10230628(isoform-parent)|ensembl:ENSG00000168314(gene)|ensembl:ENST00000383754(transcript)|ensembl:ENST00000415443(transcript)|ensembl:ENST00000428261(transcript)|ensembl:ENST00000447324(transcript)|ensembl:ENST00000452959(transcript)|uniprotkb:Q13875-3(isoform-parent)|uniprotkb:Q13875(isoform-parent)|entrezgene/locuslink:4336(identity) intact:EBI-16434393(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1lJ64iBkqUGKNB4Lz3jsp7Xu2nE9606 rogid:5ggi9FWhAQgAnqMbLGQbSC+v4049606 rigid:sMEq5sDRgc1BIo/pVMobTPUDwwY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N0S2 uniprotkb:A0A0S2Z469 intact:EBI-6872807|ensembl:ENSP00000341282|uniprotkb:Q9BWU4|uniprotkb:B2RC80|uniprotkb:Q9BWU3 intact:EBI-16470048 psi-mi:syce1_human(display_long)|uniprotkb:C10orf94(gene name synonym)|uniprotkb:Cancer/testis antigen 76(gene name synonym)|uniprotkb:SYCE1(gene name)|psi-mi:SYCE1(display_short) psi-mi:a0a0s2z469_human(display_long)|uniprotkb:MPV17(gene name)|psi-mi:MPV17(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470055 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000171772(gene)|ensembl:ENST00000343131(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0000801"(central element)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005829"(cytosol)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0051301"(cell division)|interpro:IPR026676|reactome:R-HSA-1221632|refseq:NP_001137235.1|refseq:NP_570140.1|entrezgene/locuslink:93426(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR007248(Mpv17/PMP22)|entrezgene/locuslink:4358(identity) intact:EBI-16440288(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qLVqIlFiwZJHFfoyYXV3jrqdd609606 rogid:JSwozIrhGB4JPZnxPDsiRGVjL+89606 rigid:8lLiIwAHlHeqFUi3K8+gmslds10 true sufficient binding region:37-351 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q03426 uniprotkb:F5H8H2 intact:EBI-740630|ensembl:ENSP00000228510|ensembl:ENSP00000443551 intact:EBI-16470096|ensembl:ENSP00000376487|ensembl:ENSP00000486846 psi-mi:kime_human(display_long)|uniprotkb:MVK(gene name)|psi-mi:MVK(display_short) psi-mi:f5h8h2_human(display_long)|uniprotkb:MVK(gene name)|psi-mi:MVK(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470118 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001288111.1|ensembl:ENSG00000110921(gene)|ensembl:ENST00000228510(transcript)|ensembl:ENST00000539575(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004496"(mevalonate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0006695"(cholesterol biosynthetic process)|go:"GO:0008299"(isoprenoid biosynthetic process)|go:"GO:0019287"(isopentenyl diphosphate biosynthetic process, mevalonate pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0050728"(negative regulation of inflammatory response)|interpro:IPR006203(GHMP kinase, ATP-binding, conserved site)|interpro:IPR006204(GHMP kinase)|interpro:IPR006205(Mevalonate kinase)|interpro:IPR013750(GHMP kinase, C-terminal)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR036554|rcsb pdb:2R3V|reactome:R-HSA-191273|reactome:R-HSA-2426168|refseq:NP_000422.1|refseq:NP_001107657.1|refseq:XP_016874803.1|entrezgene/locuslink:4598(identity) ensembl:ENSG00000110921(gene)|ensembl:ENST00000392727(transcript)|ensembl:ENST00000625889(transcript)|go:"GO:0004496"(mevalonate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006695"(cholesterol biosynthetic process)|go:"GO:0019287"(isopentenyl diphosphate biosynthetic process, mevalonate pathway)|interpro:IPR006204(GHMP kinase)|interpro:IPR006205(Mevalonate kinase)|interpro:IPR013750(GHMP kinase, C-terminal)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR036554|refseq:NP_001288111.1|refseq:XP_016874802.1|entrezgene/locuslink:4598(identity) intact:EBI-16433177(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aNoNx1GxznUy5Sha8pg9q6SK5lw9606 rogid:QARRM7Sfrh7jiH0zmK2l+jxt+QI9606 rigid:uqdqbhKldFKUClmHgdG1q0l8Ass true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N0S2 uniprotkb:A0A0S2Z466 intact:EBI-6872807|ensembl:ENSP00000341282|uniprotkb:Q9BWU4|uniprotkb:B2RC80|uniprotkb:Q9BWU3 intact:EBI-16470074 psi-mi:syce1_human(display_long)|uniprotkb:C10orf94(gene name synonym)|uniprotkb:Cancer/testis antigen 76(gene name synonym)|uniprotkb:SYCE1(gene name)|psi-mi:SYCE1(display_short) psi-mi:a0a0s2z466_human(display_long)|uniprotkb:MPV17(gene name)|psi-mi:MPV17(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470077 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000171772(gene)|ensembl:ENST00000343131(transcript)|go:"GO:0000795"(synaptonemal complex)|go:"GO:0000801"(central element)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005829"(cytosol)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0051301"(cell division)|interpro:IPR026676|reactome:R-HSA-1221632|refseq:NP_001137235.1|refseq:NP_570140.1|entrezgene/locuslink:93426(identity) entrezgene/locuslink:4358(identity) intact:EBI-16440288(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qLVqIlFiwZJHFfoyYXV3jrqdd609606 rogid:wN9MhGWk8flcmGtr/0RWiUlpcEM9606 rigid:oqCM61cj5e7y3d1o4ARPwMmX9UU true sufficient binding region:37-351 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HB07 uniprotkb:A0A0S2Z442 intact:EBI-709754|ensembl:ENSP00000267103|uniprotkb:Q86UA3|intact:EBI-10258793 intact:EBI-16435864 psi-mi:myg1_human(display_long)|uniprotkb:MYG1(gene name)|psi-mi:MYG1(display_short)|uniprotkb:C12orf10(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470699 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000139637(gene)|ensembl:ENST00000267103(transcript)|go:"GO:0004518"(nuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0035641"(locomotory exploration behavior)|interpro:IPR003226(Metal-dependent protein hydrolase)|mint:Q9HB07|refseq:NP_067653.3|entrezgene/locuslink:60314(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429853(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/18 rogid:k6ea0h/OMRODp3PQjed6sdxw44I9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:jSjRfyqDbFwiXsH6TXLS2TQQyA4 true sufficient binding region:156-376 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HB07 uniprotkb:A0A0S2Z3Y6 intact:EBI-709754|ensembl:ENSP00000267103|uniprotkb:Q86UA3|intact:EBI-10258793 intact:EBI-16435852 psi-mi:myg1_human(display_long)|uniprotkb:MYG1(gene name)|psi-mi:MYG1(display_short)|uniprotkb:C12orf10(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470680 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000139637(gene)|ensembl:ENST00000267103(transcript)|go:"GO:0004518"(nuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0035641"(locomotory exploration behavior)|interpro:IPR003226(Metal-dependent protein hydrolase)|mint:Q9HB07|refseq:NP_067653.3|entrezgene/locuslink:60314(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429853(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/18 rogid:k6ea0h/OMRODp3PQjed6sdxw44I9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:WuDbM+/C6DnUkGotxqXQll9zlvA true sufficient binding region:156-376 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:I6L9F6 uniprotkb:A0A0S2Z3Z2 intact:EBI-10178578|intact:EBI-21999896 intact:EBI-16470607 psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470664 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429843(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:Xb9uUHPqxlN/6C8piYbCyb381t4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:I6L9F6 uniprotkb:A0A0S2Z442 intact:EBI-10178578|intact:EBI-21999896 intact:EBI-16435864 psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470648 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429843(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:N4j7TlsIbAF5/Cy9XQP72ATsh9Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:I6L9F6 uniprotkb:A0A0S2Z3Y6 intact:EBI-10178578|intact:EBI-21999896 intact:EBI-16435852 psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470632 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429843(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:GoqpYqO+OMp0FHa5qk9j488CwkA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 uniprotkb:A0A0S2Z3Z2 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 intact:EBI-16470607 psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470616 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429057(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:YTLpq1Knw/S8c88BWpHrRytf5lk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 uniprotkb:A0A0S2Z442 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 intact:EBI-16435864 psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470591 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429057(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:4kuxEZ0wVittNCmgL7YpvAJonME true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 uniprotkb:A0A0S2Z3Y6 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 intact:EBI-16435852 psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470575 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429057(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:OIo+ShkxGvm5lfSMs4eBirlq7P0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NYB9-2 uniprotkb:E7ERP6 intact:EBI-11096309|ensembl:ENSP00000261017 intact:EBI-16429362|ensembl:ENSP00000410428|ensembl:ENSP00000431109 psi-mi:q9nyb9-2(display_long)|uniprotkb:ABI2(gene name)|psi-mi:ABI2(display_short)|uniprotkb:ARGBPIA(gene name synonym)|uniprotkb:Abelson interactor 2(gene name synonym)|uniprotkb:Abl-binding protein 3(gene name synonym)|uniprotkb:Arg-binding protein 1(gene name synonym) psi-mi:e7erp6_human(display_long)|uniprotkb:NCK2(gene name)|psi-mi:NCK2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470559 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-743598(isoform-parent)|ensembl:ENSG00000138443(gene)|ensembl:ENST00000261017(transcript)|uniprotkb:Q9NYB9-2(isoform-parent)|entrezgene/locuslink:10152(identity) ensembl:ENSG00000071051(gene)|ensembl:ENST00000451463(transcript)|ensembl:ENST00000522586(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:0051017"(actin filament bundle assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR030222|interpro:IPR036028|interpro:IPR039801|refseq:NP_001004722.1|refseq:XP_011510294.2|entrezgene/locuslink:8440(identity) intact:EBI-16438716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VNi9aUeavD8+CCi+n1DXS+7mmbs9606 rogid:4MirIo4vpZDMGWlDnofHnGzCUJ89606 rigid:UTKF+NwN5khzlfjxhnrXC8lSsAw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13191 uniprotkb:E7ERP6 intact:EBI-744027|uniprotkb:Q63Z43|uniprotkb:A8K9S7|uniprotkb:Q13192|uniprotkb:Q13193|uniprotkb:Q3LIC0|uniprotkb:Q8IVC5|uniprotkb:B7WNM4|intact:EBI-28969458|ensembl:ENSP00000377598|intact:EBI-8051403|intact:MINT-7907019 intact:EBI-16429362|ensembl:ENSP00000410428|ensembl:ENSP00000431109 psi-mi:cblb_human(display_long)|uniprotkb:Signal transduction protein CBL-B(gene name synonym)|uniprotkb:SH3-binding protein CBL-B(gene name synonym)|uniprotkb:Casitas B-lineage lymphoma proto-oncogene b(gene name synonym)|uniprotkb:RING finger protein 56(gene name synonym)|uniprotkb:CBLB(gene name)|psi-mi:CBLB(display_short)|uniprotkb:RNF56(gene name synonym)|uniprotkb:Nbla00127(orf name)|uniprotkb:RING-type E3 ubiquitin transferase CBL-B(gene name synonym) psi-mi:e7erp6_human(display_long)|uniprotkb:NCK2(gene name)|psi-mi:NCK2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470543 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_733762.2|refseq:NP_001308717.1|ensembl:ENSP00000377598|ensembl:ENST00000403724|ensembl:ENSP00000384816|ensembl:ENST00000405772|ensembl:ENSP00000384938|refseq:XP_011511559.1|ensembl:ENSG00000114423(gene)|ensembl:ENST00000394030(transcript)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0002669"(positive regulation of T cell anergy)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006955"(immune response)|go:"GO:0007165"(signal transduction)|go:"GO:0007175"(negative regulation of epidermal growth factor-activated receptor activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018193"(peptidyl-amino acid modification)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0005829"(cytosol)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042110"(T cell activation)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0046642"(negative regulation of alpha-beta T cell proliferation)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0050860"(negative regulation of T cell receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:2000583"(regulation of platelet-derived growth factor receptor-alpha signaling pathway)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003153(Adaptor protein Cbl, N-terminal helical)|interpro:IPR011992(EF-Hand type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR014742(Adaptor protein Cbl, SH2-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR017907|interpro:IPR024159|interpro:IPR024162|interpro:IPR036537|interpro:IPR036860|interpro:IPR039520|mint:Q13191|rcsb pdb:2AK5|rcsb pdb:2BZ8|rcsb pdb:2DO6|rcsb pdb:2J6F|rcsb pdb:2JNH|rcsb pdb:2LDR|rcsb pdb:2OOA|rcsb pdb:2OOB|rcsb pdb:3PFV|rcsb pdb:3VGO|rcsb pdb:3ZNI|reactome:R-HSA-983168|interpro:IPR014741(Adaptor protein Cbl, EF hand-like)|dip:DIP-33091N|entrezgene/locuslink:868(identity) ensembl:ENSG00000071051(gene)|ensembl:ENST00000451463(transcript)|ensembl:ENST00000522586(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:0051017"(actin filament bundle assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR030222|interpro:IPR036028|interpro:IPR039801|refseq:NP_001004722.1|refseq:XP_011510294.2|entrezgene/locuslink:8440(identity) intact:EBI-16432612(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:cJ5eLH0TMyM6OtmS1sM3rhsrsIk9606 rogid:4MirIo4vpZDMGWlDnofHnGzCUJ89606 rigid:SMSIHxvJ8eIs+x5jb3fFHgrL2As true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:A6PVS8 uniprotkb:E7ERP6 intact:EBI-10184751|uniprotkb:Q6P5P7|uniprotkb:A6PVS9|uniprotkb:Q8WUE0|uniprotkb:Q6ZMV4|ensembl:ENSP00000346414|ensembl:ENSP00000378524 intact:EBI-16429362|ensembl:ENSP00000410428|ensembl:ENSP00000431109 psi-mi:lriq3_human(display_long)|uniprotkb:LRRIQ3(gene name)|psi-mi:LRRIQ3(display_short)|uniprotkb:LRRC44(gene name synonym)|uniprotkb:Leucine-rich repeat-containing protein 44(gene name synonym) psi-mi:e7erp6_human(display_long)|uniprotkb:NCK2(gene name)|psi-mi:NCK2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470524 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001099129.1|ensembl:ENSG00000162620(gene)|ensembl:ENST00000354431(transcript)|ensembl:ENST00000395089(transcript)|interpro:IPR000048(IQ calmodulin-binding region)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR025875|interpro:IPR032675|entrezgene/locuslink:127255(identity) ensembl:ENSG00000071051(gene)|ensembl:ENST00000451463(transcript)|ensembl:ENST00000522586(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:0051017"(actin filament bundle assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR030222|interpro:IPR036028|interpro:IPR039801|refseq:NP_001004722.1|refseq:XP_011510294.2|entrezgene/locuslink:8440(identity) intact:EBI-16431818(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:tKMDvvd6Ewj8c0zCALo+pv6+el89606 rogid:4MirIo4vpZDMGWlDnofHnGzCUJ89606 rigid:Z1GXHWl+OzewT4eDVnDB6NPzmlk true sufficient binding region:404-624 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRK4 uniprotkb:E7ERP6 intact:EBI-741037|ensembl:ENSP00000359240|ensembl:ENSP00000359243|uniprotkb:Q8N3I0|uniprotkb:Q96J79|uniprotkb:Q96JL2|uniprotkb:B1AL14|uniprotkb:D3DR72 intact:EBI-16429362|ensembl:ENSP00000410428|ensembl:ENSP00000431109 psi-mi:lzts2_human(display_long)|uniprotkb:Protein LAPSER1(gene name synonym)|uniprotkb:LZTS2(gene name)|psi-mi:LZTS2(display_short)|uniprotkb:KIAA1813(gene name synonym)|uniprotkb:LAPSER1(gene name synonym) psi-mi:e7erp6_human(display_long)|uniprotkb:NCK2(gene name)|psi-mi:NCK2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470508 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_115805.1|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0031982"(vesicle)|go:"GO:0051013"(microtubule severing)|go:"GO:0051168"(nuclear export)|go:"GO:0051255"(spindle midzone assembly)|go:"GO:0060682"(primary ureteric bud growth)|go:"GO:0072197"(ureter morphogenesis)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|interpro:IPR028597|mint:Q9BRK4|ensembl:ENSG00000107816(gene)|ensembl:ENST00000370220(transcript)|ensembl:ENST00000370223(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|refseq:XP_016872269.1|refseq:NP_001305028.1|refseq:NP_001305029.1|refseq:NP_001305030.1|refseq:XP_005270279.1|entrezgene/locuslink:84445(identity) ensembl:ENSG00000071051(gene)|ensembl:ENST00000451463(transcript)|ensembl:ENST00000522586(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:0051017"(actin filament bundle assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR030222|interpro:IPR036028|interpro:IPR039801|refseq:NP_001004722.1|refseq:XP_011510294.2|entrezgene/locuslink:8440(identity) intact:EBI-16430556(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OaMJmnmfm6JniKUJeyg7fS6zRcw9606 rogid:4MirIo4vpZDMGWlDnofHnGzCUJ89606 rigid:Vlh3x4+vOEhpTDE3+X3NiJW8j8E true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13094 uniprotkb:E7ERP6 intact:EBI-346946|uniprotkb:Q53XV4|uniprotkb:A8KA25|ensembl:ENSP00000046794 intact:EBI-16429362|ensembl:ENSP00000410428|ensembl:ENSP00000431109 psi-mi:lcp2_human(display_long)|uniprotkb:LCP2(gene name)|psi-mi:LCP2(display_short)|uniprotkb:SH2 domain-containing leukocyte protein of 76 kDa(gene name synonym)|uniprotkb:SLP-76 tyrosine phosphoprotein(gene name synonym) psi-mi:e7erp6_human(display_long)|uniprotkb:NCK2(gene name)|psi-mi:NCK2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470492 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005556.1|dip:DIP-31812N|ensembl:ENSG00000043462(gene)|ensembl:ENST00000046794(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006955"(immune response)|go:"GO:0007169"(transmembrane receptor protein tyrosine kinase signaling pathway)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0036398"(TCR signalosome)|go:"GO:0044853"(plasma membrane raft)|go:"GO:0045576"(mast cell activation)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0050852"(T cell receptor signaling pathway)|interpro:IPR000980(SH2 motif)|interpro:IPR001660(Sterile alpha motif SAM)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR036860|mint:Q13094|rcsb pdb:1H3H|rcsb pdb:1YWO|rcsb pdb:2EAP|rcsb pdb:2ROR|rcsb pdb:6ZCJ|reactome:R-HSA-114604|reactome:R-HSA-202433|reactome:R-HSA-2424491|reactome:R-HSA-2871796|reactome:R-HSA-2871809|entrezgene/locuslink:3937(identity) ensembl:ENSG00000071051(gene)|ensembl:ENST00000451463(transcript)|ensembl:ENST00000522586(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:0051017"(actin filament bundle assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR030222|interpro:IPR036028|interpro:IPR039801|refseq:NP_001004722.1|refseq:XP_011510294.2|entrezgene/locuslink:8440(identity) intact:EBI-16430051(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:lZa+nAuqvGDrNe3Jhxn/JQaU5ug9606 rogid:4MirIo4vpZDMGWlDnofHnGzCUJ89606 rigid:mFHT8DhRg5rm3Ofb3ypiuwbjCcE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P48023 uniprotkb:A0A0S2Z4E4 intact:EBI-495538|uniprotkb:Q9BZP9|ensembl:ENSP00000356694 intact:EBI-16432934 psi-mi:tnfl6_human(display_long)|uniprotkb:Fas antigen ligand(gene name synonym)|uniprotkb:CD95L(gene name synonym)|uniprotkb:Apoptosis antigen ligand(gene name synonym)|uniprotkb:FASLG(gene name)|psi-mi:FASLG(display_short)|uniprotkb:APT1LG1(gene name synonym)|uniprotkb:FASL(gene name synonym)|uniprotkb:TNFSF6(gene name synonym)|uniprotkb:CD95 ligand(gene name synonym) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470476 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000630.1|refseq:NP_001289675.1|dip:DIP-2997N|ensembl:ENSG00000117560(gene)|ensembl:ENST00000367721(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005123"(death receptor binding)|go:"GO:0005125"(cytokine activity)|go:"GO:0097190"(apoptotic signaling pathway)|go:"GO:0097191"(extrinsic apoptotic signaling pathway)|go:"GO:0097527"(necroptotic signaling pathway)|go:"GO:1903514"(release of sequestered calcium ion into cytosol by endoplasmic reticulum)|go:"GO:1905782"(positive regulation of phosphatidylserine exposure on apoptotic cell surface)|go:"GO:2000353"(positive regulation of endothelial cell apoptotic process)|interpro:IPR006052(Tumor Necrosis Factor)|interpro:IPR006053(Tumor necrosis factor alpha, beta and c)|interpro:IPR008983(Tumour necrosis factor-like)|interpro:IPR021184|interpro:IPR028326|mint:P48023|rcsb pdb:1BZI|rcsb pdb:4MSV|rcsb pdb:5L19|rcsb pdb:5L36|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-6785807|reactome:R-HSA-69416|reactome:R-HSA-75157|reactome:R-HSA-8862803|reactome:R-HSA-9614657|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005901"(caveola)|go:"GO:0006915"(apoptotic process)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0006925"(inflammatory cell apoptotic process)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0007165"(signal transduction)|go:"GO:0007267"(cell-cell signaling)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008625"(extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0030644"(cellular chloride ion homeostasis)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043202"(lysosomal lumen)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0045742"(positive regulation of epidermal growth factor receptor signaling pathway)|go:"GO:0046666"(retinal cell programmed cell death)|go:"GO:0048388"(endosomal lumen acidification)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0060205"(cytoplasmic vesicle lumen)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070231"(T cell apoptotic process)|go:"GO:0070266"(necroptotic process)|go:"GO:0070848"(response to growth factor)|entrezgene/locuslink:356(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16438840(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3/Op+1mSXMoGr/8mhnh1oCpQ4sQ9606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:uAFKSL/tdogltHdlU75kSFmdTh8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P48023 uniprotkb:P16333 intact:EBI-495538|uniprotkb:Q9BZP9|ensembl:ENSP00000356694 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:tnfl6_human(display_long)|uniprotkb:Fas antigen ligand(gene name synonym)|uniprotkb:CD95L(gene name synonym)|uniprotkb:Apoptosis antigen ligand(gene name synonym)|uniprotkb:FASLG(gene name)|psi-mi:FASLG(display_short)|uniprotkb:APT1LG1(gene name synonym)|uniprotkb:FASL(gene name synonym)|uniprotkb:TNFSF6(gene name synonym)|uniprotkb:CD95 ligand(gene name synonym) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470460 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000630.1|refseq:NP_001289675.1|dip:DIP-2997N|ensembl:ENSG00000117560(gene)|ensembl:ENST00000367721(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005123"(death receptor binding)|go:"GO:0005125"(cytokine activity)|go:"GO:0097190"(apoptotic signaling pathway)|go:"GO:0097191"(extrinsic apoptotic signaling pathway)|go:"GO:0097527"(necroptotic signaling pathway)|go:"GO:1903514"(release of sequestered calcium ion into cytosol by endoplasmic reticulum)|go:"GO:1905782"(positive regulation of phosphatidylserine exposure on apoptotic cell surface)|go:"GO:2000353"(positive regulation of endothelial cell apoptotic process)|interpro:IPR006052(Tumor Necrosis Factor)|interpro:IPR006053(Tumor necrosis factor alpha, beta and c)|interpro:IPR008983(Tumour necrosis factor-like)|interpro:IPR021184|interpro:IPR028326|mint:P48023|rcsb pdb:1BZI|rcsb pdb:4MSV|rcsb pdb:5L19|rcsb pdb:5L36|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-6785807|reactome:R-HSA-69416|reactome:R-HSA-75157|reactome:R-HSA-8862803|reactome:R-HSA-9614657|go:"GO:0071346"(cellular response to interferon-gamma)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0005901"(caveola)|go:"GO:0006915"(apoptotic process)|go:"GO:0006919"(activation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0006925"(inflammatory cell apoptotic process)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0007165"(signal transduction)|go:"GO:0007267"(cell-cell signaling)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008625"(extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0016525"(negative regulation of angiogenesis)|go:"GO:0030644"(cellular chloride ion homeostasis)|go:"GO:0032496"(response to lipopolysaccharide)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043202"(lysosomal lumen)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0045742"(positive regulation of epidermal growth factor receptor signaling pathway)|go:"GO:0046666"(retinal cell programmed cell death)|go:"GO:0048388"(endosomal lumen acidification)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0060205"(cytoplasmic vesicle lumen)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070231"(T cell apoptotic process)|go:"GO:0070266"(necroptotic process)|go:"GO:0070848"(response to growth factor)|entrezgene/locuslink:356(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16438840(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3/Op+1mSXMoGr/8mhnh1oCpQ4sQ9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:4wlsxTeTgH4bxnTfUv4IhlAUSdU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NYB9-2 uniprotkb:P16333 intact:EBI-11096309|ensembl:ENSP00000261017 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:q9nyb9-2(display_long)|uniprotkb:ABI2(gene name)|psi-mi:ABI2(display_short)|uniprotkb:ARGBPIA(gene name synonym)|uniprotkb:Abelson interactor 2(gene name synonym)|uniprotkb:Abl-binding protein 3(gene name synonym)|uniprotkb:Arg-binding protein 1(gene name synonym) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470443 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-743598(isoform-parent)|ensembl:ENSG00000138443(gene)|ensembl:ENST00000261017(transcript)|uniprotkb:Q9NYB9-2(isoform-parent)|entrezgene/locuslink:10152(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16438696(see-also)|intact:EBI-16438706(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VNi9aUeavD8+CCi+n1DXS+7mmbs9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:x9YY/TRt5pxM+zUMiwe6vlUM2OY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O60504 uniprotkb:A0A0S2Z4E4 intact:EBI-741237|ensembl:ENSP00000240123|uniprotkb:Q5BJE4|uniprotkb:Q6NX54|uniprotkb:Q9UQE4|intact:EBI-1222937|uniprotkb:Q96FY4 intact:EBI-16432934 psi-mi:vinex_human(display_long)|uniprotkb:SCAM1(gene name synonym)|uniprotkb:SH3-containing adapter molecule 1(gene name synonym)|uniprotkb:Sorbin and SH3 domain-containing protein 3(gene name synonym)|uniprotkb:SORBS3(gene name)|psi-mi:SORBS3(display_short) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470427 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000120896(gene)|ensembl:ENST00000240123(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005925"(focal adhesion)|go:"GO:0007015"(actin filament organization)|go:"GO:0007155"(cell adhesion)|go:"GO:0017166"(vinculin binding)|go:"GO:0031589"(cell-substrate adhesion)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0051495"(positive regulation of cytoskeleton organization)|go:"GO:0051496"(positive regulation of stress fiber assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR003127(Sorbin-like)|interpro:IPR028510|interpro:IPR035607|interpro:IPR035608|interpro:IPR035609|interpro:IPR036028|mint:O60504|rcsb pdb:2CT3|rcsb pdb:2DLM|rcsb pdb:2NWM|rcsb pdb:2YUP|reactome:R-HSA-445355|refseq:NP_001018003.1|refseq:NP_005766.3|refseq:XP_005273428.1|refseq:XP_016868433.1|refseq:XP_016868434.1|refseq:XP_016868435.1|entrezgene/locuslink:10174(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16436478(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Mq3VXduU/1gqfUwliO9sBBOb/Vc9606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:Wf1uzrybzAXR1LzrSPjLOkeI7vQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O60504 uniprotkb:P16333 intact:EBI-741237|ensembl:ENSP00000240123|uniprotkb:Q5BJE4|uniprotkb:Q6NX54|uniprotkb:Q9UQE4|intact:EBI-1222937|uniprotkb:Q96FY4 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:vinex_human(display_long)|uniprotkb:SCAM1(gene name synonym)|uniprotkb:SH3-containing adapter molecule 1(gene name synonym)|uniprotkb:Sorbin and SH3 domain-containing protein 3(gene name synonym)|uniprotkb:SORBS3(gene name)|psi-mi:SORBS3(display_short) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470411 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000120896(gene)|ensembl:ENST00000240123(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005925"(focal adhesion)|go:"GO:0007015"(actin filament organization)|go:"GO:0007155"(cell adhesion)|go:"GO:0017166"(vinculin binding)|go:"GO:0031589"(cell-substrate adhesion)|go:"GO:0043410"(positive regulation of MAPK cascade)|go:"GO:0051495"(positive regulation of cytoskeleton organization)|go:"GO:0051496"(positive regulation of stress fiber assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR003127(Sorbin-like)|interpro:IPR028510|interpro:IPR035607|interpro:IPR035608|interpro:IPR035609|interpro:IPR036028|mint:O60504|rcsb pdb:2CT3|rcsb pdb:2DLM|rcsb pdb:2NWM|rcsb pdb:2YUP|reactome:R-HSA-445355|refseq:NP_001018003.1|refseq:NP_005766.3|refseq:XP_005273428.1|refseq:XP_016868433.1|refseq:XP_016868434.1|refseq:XP_016868435.1|entrezgene/locuslink:10174(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16436478(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Mq3VXduU/1gqfUwliO9sBBOb/Vc9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:I4uCeo4E/G8vGrD0IMgM7xlXbDc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:A0A0C3SFZ9 uniprotkb:P16333 intact:EBI-11977403|ensembl:ENSP00000473001 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:a0a0c3sfz9_human(display_long)|uniprotkb:FCHO1(gene name)|psi-mi:FCHO1(display_short)|uniprotkb:hCG_2000568(orf name) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470395 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000130475(gene)|ensembl:ENST00000594202(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0072583"(clathrin-dependent endocytosis)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR018808|interpro:IPR027267|interpro:IPR028565|interpro:IPR030121|interpro:IPR031160|interpro:IPR042735|go:"GO:0005829"(cytosol)|refseq:NP_001154829.1|entrezgene/locuslink:23149(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16436448(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YfVbZHntDpLjsmnH0GM2eaqEGjY9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:eDeiXjBy+He+BuOAMKbvG6mviMU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16436244 uniprotkb:A0A0S2Z4E4 - intact:EBI-16432934 psi-mi:"ccsb orf id: 54692"(display_short)|psi-mi:EBI-16436244(display_long) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470379 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:57594(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16436266(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:pQLRUATtfhRxD9ugVFmKu+SJGB89606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:jE/cw+SX7GCVty4cbfcqtDzUYdo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16436244 uniprotkb:P16333 - intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:"ccsb orf id: 54692"(display_short)|psi-mi:EBI-16436244(display_long) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470363 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:57594(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16436266(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:pQLRUATtfhRxD9ugVFmKu+SJGB89606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:GJPGM470jq0/0dfrDmntV0/qtY4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:B7ZLH0 uniprotkb:A0A0S2Z4E4 intact:EBI-10220102|intact:EBI-11975495|intact:EBI-12742387 intact:EBI-16432934 psi-mi:b7zlh0_human(display_long)|uniprotkb:FAM22F(gene name)|psi-mi:FAM22F(display_short) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470347 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR024309|interpro:IPR024310|entrezgene/locuslink:54754(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16436234(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:0MIH/bAcmcr+6BUiuF4G+9qCEEE9606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:aGXhP/KV6A4wlPTFn+r36fpgAZw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:B7ZLH0 uniprotkb:P16333 intact:EBI-10220102|intact:EBI-11975495|intact:EBI-12742387 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:b7zlh0_human(display_long)|uniprotkb:FAM22F(gene name)|psi-mi:FAM22F(display_short) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470331 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR024309|interpro:IPR024310|entrezgene/locuslink:54754(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16436234(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:0MIH/bAcmcr+6BUiuF4G+9qCEEE9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:DeMqfVFzzvr3oPz65o2pJ0gpslo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96IJ6 uniprotkb:A0A0S2Z4E4 intact:EBI-750953|uniprotkb:A6NJ74|uniprotkb:A8K3Q6|uniprotkb:Q53GI0|uniprotkb:Q9NWC3|uniprotkb:Q9Y5P5|uniprotkb:B3KMT4|ensembl:ENSP00000315925|ensembl:ENSP00000340760|ensembl:ENSP00000350949|ensembl:ENSP00000363016|ensembl:ENSP00000478700|ensembl:ENSP00000506941 intact:EBI-16432934 psi-mi:gmppa_human(display_long)|uniprotkb:GMPPA(gene name)|psi-mi:GMPPA(display_short)|uniprotkb:GTP-mannose-1-phosphate guanylyltransferase alpha(gene name synonym)|uniprotkb:GDP-mannose pyrophosphorylase A(gene name synonym) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470315 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_037467.2|refseq:NP_995319.1|refseq:XP_005246543.1|refseq:XP_016859398.1|refseq:XP_016859399.1|refseq:XP_016859400.1|ensembl:ENSG00000144591(gene)|ensembl:ENST00000313597(transcript)|ensembl:ENST00000341142(transcript)|ensembl:ENST00000358215(transcript)|ensembl:ENST00000373908(transcript)|ensembl:ENST00000622191(transcript)|ensembl:ENST00000683946(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0009058"(biosynthetic process)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR005835(Nucleotidyl transferase)|interpro:IPR018357|interpro:IPR029044|mint:Q96IJ6|rcsb pdb:7D72|rcsb pdb:7D73|rcsb pdb:7D74|reactome:R-HSA-446205|entrezgene/locuslink:29926(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16434569(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ASWzJoQB8W+e2OKYEenXpUJxflI9606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:CenXYIo74famgMzD41k/PsIs35o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96IJ6 uniprotkb:P16333 intact:EBI-750953|uniprotkb:A6NJ74|uniprotkb:A8K3Q6|uniprotkb:Q53GI0|uniprotkb:Q9NWC3|uniprotkb:Q9Y5P5|uniprotkb:B3KMT4|ensembl:ENSP00000315925|ensembl:ENSP00000340760|ensembl:ENSP00000350949|ensembl:ENSP00000363016|ensembl:ENSP00000478700|ensembl:ENSP00000506941 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:gmppa_human(display_long)|uniprotkb:GMPPA(gene name)|psi-mi:GMPPA(display_short)|uniprotkb:GTP-mannose-1-phosphate guanylyltransferase alpha(gene name synonym)|uniprotkb:GDP-mannose pyrophosphorylase A(gene name synonym) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470299 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_037467.2|refseq:NP_995319.1|refseq:XP_005246543.1|refseq:XP_016859398.1|refseq:XP_016859399.1|refseq:XP_016859400.1|ensembl:ENSG00000144591(gene)|ensembl:ENST00000313597(transcript)|ensembl:ENST00000341142(transcript)|ensembl:ENST00000358215(transcript)|ensembl:ENST00000373908(transcript)|ensembl:ENST00000622191(transcript)|ensembl:ENST00000683946(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0009058"(biosynthetic process)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR005835(Nucleotidyl transferase)|interpro:IPR018357|interpro:IPR029044|mint:Q96IJ6|rcsb pdb:7D72|rcsb pdb:7D73|rcsb pdb:7D74|reactome:R-HSA-446205|entrezgene/locuslink:29926(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16434569(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ASWzJoQB8W+e2OKYEenXpUJxflI9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:BOXpuyxBW2RxwkpFnIt9wPZj5xA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43281-2 uniprotkb:P16333 intact:EBI-11525448|ensembl:ENSP00000340607 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:o43281-2(display_long)|uniprotkb:CASS3(gene name synonym)|uniprotkb:Cas scaffolding protein family member 3(gene name synonym)|uniprotkb:EFS(gene name)|psi-mi:EFS(display_short) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470282 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-718488(isoform-parent)|ensembl:ENSG00000100842(gene)|ensembl:ENST00000351354(transcript)|uniprotkb:O43281-2(isoform-parent)|entrezgene/locuslink:10278(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16432924(see-also)|intact:EBI-16432941(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JdV6uL2+FglKvl/B+OVXk/eIIKQ9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:Ue22dEliW3KgLlZrqlU1CDNleUc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00401 uniprotkb:A0A0S2Z4E4 intact:EBI-957615|ensembl:ENSP00000223023|uniprotkb:Q7Z746|uniprotkb:A1JUI9 intact:EBI-16432934 psi-mi:wasl_human(display_long)|uniprotkb:WASL(gene name)|psi-mi:WASL(display_short) psi-mi:a0a0s2z4e4_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470266 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006900"(vesicle budding from membrane)|go:"GO:0008154"(actin polymerization or depolymerization)|go:"GO:0009617"(response to bacterium)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016050"(vesicle organization)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0030048"(actin filament-based movement)|go:"GO:0030050"(vesicle transport along actin filament)|go:"GO:0030478"(actin cap)|go:"GO:0030666"(endocytic vesicle membrane)|go:"GO:0030695"(GTPase regulator activity)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0034629"|rcsb pdb:2FF3|rcsb pdb:2LNH|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:2VCP|rcsb pdb:4CC2|rcsb pdb:4CC7|reactome:R-HSA-2029482|reactome:R-HSA-203641|reactome:R-HSA-373753|reactome:R-HSA-3928662|reactome:R-HSA-418885|reactome:R-HSA-5663213|reactome:R-HSA-8856828|reactome:R-HSA-9013148|reactome:R-HSA-9013149|reactome:R-HSA-9013406|reactome:R-HSA-9013409|reactome:R-HSA-9013424|reactome:R-HSA-9664422|ensembl:ENSG00000106299(gene)|ensembl:ENST00000223023(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0051301"(cell division)|go:"GO:0051491"(positive regulation of filopodium assembly)|go:"GO:0051653"(spindle localization)|go:"GO:0060997"(dendritic spine morphogenesis)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070062"(extracellular exosome)|go:"GO:1903526"(negative regulation of membrane tubulation)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|go:"GO:2000402"(negative regulation of lymphocyte migration)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR000697(EVH1)|interpro:IPR003124(Actin-binding WH2)|interpro:IPR011026(Wiscott-Aldrich syndrome, C-terminal)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR030214|interpro:IPR033927|interpro:IPR036936|mint:O00401|go:"GO:0005634"(nucleus)|refseq:NP_003932.3|dip:DIP-29042N|entrezgene/locuslink:8976(identity) interpro:IPR035562|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR028526|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|entrezgene/locuslink:4690(identity) intact:EBI-16429342(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PinEPh47IRuCgiaJJZqStRhIAGQ9606 rogid:jz8jH0vq1IWFKlMxIBl83KGgXoE9606 rigid:j4wkcZae4jxzlwhg2a0wp2/w6tQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00401 uniprotkb:P16333 intact:EBI-957615|ensembl:ENSP00000223023|uniprotkb:Q7Z746|uniprotkb:A1JUI9 intact:EBI-389883|uniprotkb:B7Z751|ensembl:ENSP00000288986|ensembl:ENSP00000417273|intact:EBI-3448658|uniprotkb:D3DNE3 psi-mi:wasl_human(display_long)|uniprotkb:WASL(gene name)|psi-mi:WASL(display_short) psi-mi:nck1_human(display_long)|uniprotkb:NCK1(gene name)|psi-mi:NCK1(display_short)|uniprotkb:NCK(gene name synonym)|uniprotkb:NCK adaptor protein 1(gene name synonym)|uniprotkb:SH2/SH3 adaptor protein NCK-alpha(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470250 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006900"(vesicle budding from membrane)|go:"GO:0008154"(actin polymerization or depolymerization)|go:"GO:0009617"(response to bacterium)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016050"(vesicle organization)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0030048"(actin filament-based movement)|go:"GO:0030050"(vesicle transport along actin filament)|go:"GO:0030478"(actin cap)|go:"GO:0030666"(endocytic vesicle membrane)|go:"GO:0030695"(GTPase regulator activity)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0034629"|rcsb pdb:2FF3|rcsb pdb:2LNH|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:2VCP|rcsb pdb:4CC2|rcsb pdb:4CC7|reactome:R-HSA-2029482|reactome:R-HSA-203641|reactome:R-HSA-373753|reactome:R-HSA-3928662|reactome:R-HSA-418885|reactome:R-HSA-5663213|reactome:R-HSA-8856828|reactome:R-HSA-9013148|reactome:R-HSA-9013149|reactome:R-HSA-9013406|reactome:R-HSA-9013409|reactome:R-HSA-9013424|reactome:R-HSA-9664422|ensembl:ENSG00000106299(gene)|ensembl:ENST00000223023(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0051301"(cell division)|go:"GO:0051491"(positive regulation of filopodium assembly)|go:"GO:0051653"(spindle localization)|go:"GO:0060997"(dendritic spine morphogenesis)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070062"(extracellular exosome)|go:"GO:1903526"(negative regulation of membrane tubulation)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|go:"GO:2000402"(negative regulation of lymphocyte migration)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR000697(EVH1)|interpro:IPR003124(Actin-binding WH2)|interpro:IPR011026(Wiscott-Aldrich syndrome, C-terminal)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR030214|interpro:IPR033927|interpro:IPR036936|mint:O00401|go:"GO:0005634"(nucleus)|refseq:NP_003932.3|dip:DIP-29042N|entrezgene/locuslink:8976(identity) refseq:NP_001278928.1|ensembl:ENSG00000158092(gene)|ensembl:ENST00000288986(transcript)|ensembl:ENST00000481752(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0005911"(cell-cell junction)|go:"GO:0006930"(substrate-dependent cell migration, cell extension)|go:"GO:0007015"(actin filament organization)|go:"GO:0007172"(signal complex assembly)|go:"GO:0008093"(cytoskeletal anchor activity)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030032"(lamellipodium assembly)|go:"GO:0030159"(signaling receptor complex adaptor activity)|refseq:NP_001177725.1|refseq:NP_006144.1|go:"GO:1903676"(positive regulation of cap-dependent translational initiation)|go:"GO:1903679"(positive regulation of cap-independent translational initiation)|go:"GO:1903898"(negative regulation of PERK-mediated unfolded protein response)|go:"GO:1903912"(negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation)|go:"GO:1990441"(negative regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|interpro:IPR000980(SH2 motif)|interpro:IPR001452(Src homology-3)|interpro:IPR017304(Cytoplasmic, NCK)|interpro:IPR028526|interpro:IPR035562|interpro:IPR035564|interpro:IPR035565|interpro:IPR035882|interpro:IPR036028|interpro:IPR036860|mint:P16333|rcsb pdb:2CI8|rcsb pdb:2CI9|rcsb pdb:2CUB|rcsb pdb:2JS0|rcsb pdb:2JS2|rcsb pdb:2JW4|rcsb pdb:5QU1|rcsb pdb:5QU2|rcsb pdb:5QU3|rcsb pdb:5QU4|rcsb pdb:5QU5|rcsb pdb:5QU6|rcsb pdb:5QU7|rcsb pdb:5QU8|rcsb pdb:5QUA|reactome:R-HSA-186763|reactome:R-HSA-202433|reactome:R-HSA-2029482|reactome:R-HSA-373753|reactome:R-HSA-418885|reactome:R-HSA-428540|reactome:R-HSA-4420097|reactome:R-HSA-5663213|reactome:R-HSA-9013420|reactome:R-HSA-9013424|reactome:R-HSA-9664422|reactome:R-HSA-983695|go:"GO:0030334"(regulation of cell migration)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030838"(positive regulation of actin filament polymerization)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0033137"(negative regulation of peptidyl-serine phosphorylation)|go:"GO:0035591"(signaling adaptor activity)|go:"GO:0036493"(positive regulation of translation in response to endoplasmic reticulum stress)|go:"GO:0042102"(positive regulation of T cell proliferation)|go:"GO:0042110"(T cell activation)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046875"(ephrin receptor binding)|go:"GO:0048013"(ephrin receptor signaling pathway)|go:"GO:0051707"(response to other organism)|go:"GO:0060548"(negative regulation of cell death)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071074"(eukaryotic initiation factor eIF2 binding)|go:"GO:1902237"(positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|dip:DIP-639N|entrezgene/locuslink:4690(identity) intact:EBI-16429342(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PinEPh47IRuCgiaJJZqStRhIAGQ9606 rogid:UzgLYRQQ9VjN7eKkgn76At/7cSA9606 rigid:lqCI+ofXwzz8oM7+qVUNjwqgiuw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q92845 intact:EBI-16470212 intact:EBI-954040|ensembl:ENSP00000354560|uniprotkb:Q8NHU7|uniprotkb:Q9H416|uniprotkb:B2RDL1|uniprotkb:B1AKU4|uniprotkb:B7Z8A3|uniprotkb:F5H591|uniprotkb:B1AKU5 - psi-mi:kifa3_human(display_long)|uniprotkb:Smg GDS-associated protein(gene name synonym)|uniprotkb:KIFAP3(gene name)|psi-mi:KIFAP3(display_short)|uniprotkb:SMAP(gene name synonym)|uniprotkb:KIF3AP(gene name synonym) psi-mi:"ccsb isoform id: ncf2_3"(display_short)|psi-mi:EBI-16470212(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470234 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000075945(gene)|ensembl:ENST00000361580(transcript)|go:"GO:0000794"(condensed nuclear chromosome)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005929"(cilium)|go:"GO:0005930"(axoneme)|go:"GO:0007017"(microtubule-based process)|go:"GO:0007018"(microtubule-based movement)|go:"GO:0007165"(signal transduction)|go:"GO:0008104"(protein localization)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016939"(kinesin II complex)|go:"GO:0019894"(kinesin binding)|go:"GO:1990075"(periciliary membrane compartment)|interpro:IPR000225(Armadillo)|go:"GO:0019903"(protein phosphatase binding)|interpro:IPR008658(Kinesin-associated)|interpro:IPR016024(Armadillo-type fold)|reactome:R-HSA-1445148|go:"GO:0032391"(photoreceptor connecting cilium)|go:"GO:0035869"(ciliary transition zone)|reactome:R-HSA-2132295|reactome:R-HSA-5620924|go:"GO:0036064"(ciliary basal body)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044782"(cilium organization)|go:"GO:0046587"(positive regulation of calcium-dependent cell-cell adhesion)|reactome:R-HSA-6811434|reactome:R-HSA-983189|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0072383"(plus-end-directed vesicle transport along microtubule)|go:"GO:0097542"(ciliary tip)|go:"GO:0120170"(intraciliary transport particle B binding)|refseq:NP_001191443.1|refseq:NP_001191445.1|refseq:NP_001191446.1|refseq:NP_055785.2|entrezgene/locuslink:22920(identity) entrezgene/locuslink:4688(identity) intact:EBI-16432208(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:pEcMuA/HlGJKpLQzlt1/R00TZ3Q9606 rogid:XHifaKiQX9T73M8hI3zbprOvASg9606 rigid:gRX/2d+g9jgtNS4XYuuN0OtCSok true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 intact:EBI-16470212 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 - psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:"ccsb isoform id: ncf2_3"(display_short)|psi-mi:EBI-16470212(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470215 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) entrezgene/locuslink:4688(identity) intact:EBI-16431890(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:XHifaKiQX9T73M8hI3zbprOvASg9606 rigid:mzuItcr2fPE1sjLqbGj9Mu5ukUs true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P12814 uniprotkb:Q9UBF9 intact:EBI-351710|uniprotkb:Q9BTN1|uniprotkb:Q1HE25|uniprotkb:B7TY16|intact:EBI-3866221|uniprotkb:B3V8S3|uniprotkb:B4DHH3|ensembl:ENSP00000193403 intact:EBI-296701|uniprotkb:A0A4R6|uniprotkb:B4DT79 psi-mi:actn1_human(display_long)|uniprotkb:ACTN1(gene name)|psi-mi:ACTN1(display_short)|uniprotkb:Alpha-actinin cytoskeletal isoform(gene name synonym)|uniprotkb:Non-muscle alpha-actinin-1(gene name synonym)|uniprotkb:F-actin cross-linking protein(gene name synonym) psi-mi:myoti_human(display_long)|uniprotkb:MYOT(gene name)|psi-mi:MYOT(display_short)|uniprotkb:TTID(gene name synonym)|uniprotkb:Titin immunoglobulin domain protein(gene name synonym)|uniprotkb:Myofibrillar titin-like Ig domains protein(gene name synonym)|uniprotkb:57 kDa cytoskeletal protein(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470196 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001093.1|refseq:NP_001123477.1|refseq:NP_001123476.1|dip:DIP-33184N|ensembl:ENSG00000072110(gene)|ensembl:ENST00000193403(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0001726"(ruffle)|go:"GO:0003725"(double-stranded RNA binding)|go:"GO:0005178"(integrin binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005903"(brush border)|go:"GO:0005911"(cell-cell junction)|go:"GO:0005916"(fascia adherens)|go:"GO:0005925"(focal adhesion)|go:"GO:0007015"(actin filament organization)|go:"GO:0017166"(vinculin binding)|go:"GO:0030018"(Z disc)|go:"GO:0030220"(platelet formation)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0031093"(platelet alpha granule lumen)|go:"GO:0031143"(pseudopodium)|go:"GO:0036344"(platelet morphogenesis)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0042995"(cell projection)|go:"GO:0044325"(transmembrane transporter binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:0051015"(actin filament binding)|go:"GO:0051017"(actin filament bundle assembly)|go:"GO:0051271"(negative regulation of cellular component movement)|go:"GO:0051639"(actin filament network formation)|go:"GO:0070062"(extracellular exosome)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099186"(structural constituent of postsynapse)|interpro:IPR001589(Actinin-type, actin-binding, conserved site)|interpro:IPR001715(Calponin-like actin-binding)|interpro:IPR002017(Spectrin repeat)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR014837(EF-hand, Ca insensitive)|interpro:IPR018159|interpro:IPR018247|interpro:IPR036872|mint:P12814|rcsb pdb:2EYI|rcsb pdb:2EYN|rcsb pdb:2N8Y|rcsb pdb:2N8Z|reactome:R-HSA-114608|reactome:R-HSA-3000170|reactome:R-HSA-373753|reactome:R-HSA-446388|reactome:R-HSA-9013405|reactome:R-HSA-9013418|reactome:R-HSA-9035034|entrezgene/locuslink:87(identity) go:"GO:0030424"(axon)|go:"GO:0042383"(sarcolemma)|go:"GO:0043025"(neuronal cell body)|go:"GO:0050808"(synapse organization)|go:"GO:0051393"(alpha-actinin binding)|go:"GO:0030018"(Z disc)|go:"GO:0003779"(actin binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006936"(muscle contraction)|go:"GO:0007156"(homophilic cell adhesion via plasma membrane adhesion molecules)|go:"GO:0008046"(axon guidance receptor activity)|go:"GO:0008307"(structural constituent of muscle)|go:"GO:0015629"(actin cytoskeleton)|refseq:NP_001129412.1|refseq:NP_006781.1|interpro:IPR007110(Immunoglobulin-like)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR013098(Immunoglobulin I-set)|interpro:IPR003599(Immunoglobulin subtype)|interpro:IPR003598(Immunoglobulin subtype 2)|rcsb pdb:2KDG|rcsb pdb:2KKQ|refseq:NP_001287840.1|interpro:IPR036179|entrezgene/locuslink:9499(identity) intact:EBI-16433911(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:guTURyt26f1ort4NAlYyabNc+WE9606 rogid:y7p/HY416pf0hNjpo0B5cRolBAk9606 rigid:bPkL3/qVP9rAJ+56DZMs54ZxeYs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:A0A0S2Z429 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-16470161|ensembl:ENSP00000498474 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:a0a0s2z429_human(display_long)|uniprotkb:MXI1(gene name)|psi-mi:MXI1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470180 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) ensembl:ENSG00000119950(gene)|ensembl:ENST00000651557(transcript)|entrezgene/locuslink:4601(identity) intact:EBI-16439829(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:GxWoSYidUugRrliIv8jOCRLaqec9606 rigid:We5nCqyAcseJwfFSxlKThfrGeRs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:A0A0S2Z429 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-16470161|ensembl:ENSP00000498474 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:a0a0s2z429_human(display_long)|uniprotkb:MXI1(gene name)|psi-mi:MXI1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470164 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) ensembl:ENSG00000119950(gene)|ensembl:ENST00000651557(transcript)|entrezgene/locuslink:4601(identity) intact:EBI-16436117(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:GxWoSYidUugRrliIv8jOCRLaqec9606 rigid:+byfwSBoGfuWEiylGHDnE40/CV0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WVE0 uniprotkb:A0A0S2Z3Y6 intact:EBI-16430415|ensembl:ENSP00000372202|ensembl:ENSP00000372206|uniprotkb:B5G4V1 intact:EBI-16435852 psi-mi:efmt1_human(display_long)|uniprotkb:"N(6)-adenine-specific DNA methyltransferase 2"(gene name synonym)|uniprotkb:Protein-lysine N-methyltransferase N6AMT2(gene name synonym)|uniprotkb:EEF1AKMT1(gene name)|psi-mi:EEF1AKMT1(display_short)|uniprotkb:N6AMT2(gene name synonym)|uniprotkb:eEF1A-KMT(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470753 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000150456(gene)|ensembl:ENST00000382754(transcript)|ensembl:ENST00000382758(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0018022"(peptidyl-lysine methylation)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR019369|interpro:IPR029063|interpro:IPR041370|reactome:R-HSA-8876725|refseq:NP_001305868.1|refseq:NP_777588.1|refseq:XP_016875921.1|entrezgene/locuslink:221143(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430440(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qKNqMbQPejzDNq5IswwsVDIUopY9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:xIi4jLqGVri0ZDYas3uvhZkiyAE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WVE0 uniprotkb:Q99608 intact:EBI-16430415|ensembl:ENSP00000372202|ensembl:ENSP00000372206|uniprotkb:B5G4V1 intact:EBI-718177|uniprotkb:B2R6Z5|ensembl:ENSP00000497916 psi-mi:efmt1_human(display_long)|uniprotkb:"N(6)-adenine-specific DNA methyltransferase 2"(gene name synonym)|uniprotkb:Protein-lysine N-methyltransferase N6AMT2(gene name synonym)|uniprotkb:EEF1AKMT1(gene name)|psi-mi:EEF1AKMT1(display_short)|uniprotkb:N6AMT2(gene name synonym)|uniprotkb:eEF1A-KMT(gene name synonym) psi-mi:necd_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470737 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000150456(gene)|ensembl:ENST00000382754(transcript)|ensembl:ENST00000382758(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0018022"(peptidyl-lysine methylation)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR019369|interpro:IPR029063|interpro:IPR041370|reactome:R-HSA-8876725|refseq:NP_001305868.1|refseq:NP_777588.1|refseq:XP_016875921.1|entrezgene/locuslink:221143(identity) refseq:NP_002478.1|ensembl:ENSG00000182636(gene)|ensembl:ENST00000649030(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0003016"(respiratory system process)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0007413"(axonal fasciculation)|go:"GO:0007417"(central nervous system development)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009791"(post-embryonic development)|go:"GO:0019233"(sensory perception of pain)|go:"GO:0032991"(protein-containing complex)|go:"GO:0040008"(regulation of growth)|go:"GO:0042995"(cell projection)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0043204"(perikaryon)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0048011"(neurotrophin TRK receptor signaling pathway)|go:"GO:0048675"(axon extension)|go:"GO:0048871"(multicellular organismal homeostasis)|go:"GO:0071514"(genomic imprinting)|go:"GO:0090312"(positive regulation of protein deacetylation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|reactome:R-HSA-6785807|go:"GO:0008347"(glial cell migration)|entrezgene/locuslink:4692(identity) intact:EBI-16430440(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qKNqMbQPejzDNq5IswwsVDIUopY9606 rogid:8hFkLGNpSu6jmbrqmJuxNBZoWTs9606 rigid:F0O+chgUWIVbxDe6PC02n/pi9kM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HB07 uniprotkb:A0A0S2Z3Z2 intact:EBI-709754|ensembl:ENSP00000267103|uniprotkb:Q86UA3|intact:EBI-10258793 intact:EBI-16470607 psi-mi:myg1_human(display_long)|uniprotkb:MYG1(gene name)|psi-mi:MYG1(display_short)|uniprotkb:C12orf10(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470718 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000139637(gene)|ensembl:ENST00000267103(transcript)|go:"GO:0004518"(nuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0035641"(locomotory exploration behavior)|interpro:IPR003226(Metal-dependent protein hydrolase)|mint:Q9HB07|refseq:NP_067653.3|entrezgene/locuslink:60314(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16429853(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/18 rogid:k6ea0h/OMRODp3PQjed6sdxw44I9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:5woGWhpP0CAQzSXoPaX+o/YYnsU true sufficient binding region:156-376 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IWV1-3 uniprotkb:A0A0S2Z3Z2 intact:EBI-12327415|ensembl:ENSP00000356186 intact:EBI-16470607 psi-mi:q8iwv1-3(display_long)|uniprotkb:LAX1(gene name)|psi-mi:LAX1(display_short)|uniprotkb:LAX(gene name synonym)|uniprotkb:Linker for activation of X cells(gene name synonym)|uniprotkb:Membrane-associated adapter protein LAX(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470992 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10232942(isoform-parent)|ensembl:ENSG00000122188(gene)|ensembl:ENST00000367217(transcript)|uniprotkb:Q8IWV1-3(isoform-parent)|entrezgene/locuslink:54900(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431471(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fIN9VFNBayQpxaE9ntgA2qgoFJU9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:9ecBaKx8wUYyC8iQA4YqcWCZXsY true sufficient binding region:61-382 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IWV1-3 uniprotkb:A0A0S2Z442 intact:EBI-12327415|ensembl:ENSP00000356186 intact:EBI-16435864 psi-mi:q8iwv1-3(display_long)|uniprotkb:LAX1(gene name)|psi-mi:LAX1(display_short)|uniprotkb:LAX(gene name synonym)|uniprotkb:Linker for activation of X cells(gene name synonym)|uniprotkb:Membrane-associated adapter protein LAX(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470973 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10232942(isoform-parent)|ensembl:ENSG00000122188(gene)|ensembl:ENST00000367217(transcript)|uniprotkb:Q8IWV1-3(isoform-parent)|entrezgene/locuslink:54900(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431471(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fIN9VFNBayQpxaE9ntgA2qgoFJU9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:tcH28S8R7Ptj9D9vKthA5Fmxs1s true sufficient binding region:61-382 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IWV1-3 uniprotkb:A0A0S2Z3Y6 intact:EBI-12327415|ensembl:ENSP00000356186 intact:EBI-16435852 psi-mi:q8iwv1-3(display_long)|uniprotkb:LAX1(gene name)|psi-mi:LAX1(display_short)|uniprotkb:LAX(gene name synonym)|uniprotkb:Linker for activation of X cells(gene name synonym)|uniprotkb:Membrane-associated adapter protein LAX(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470954 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10232942(isoform-parent)|ensembl:ENSG00000122188(gene)|ensembl:ENST00000367217(transcript)|uniprotkb:Q8IWV1-3(isoform-parent)|entrezgene/locuslink:54900(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431471(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fIN9VFNBayQpxaE9ntgA2qgoFJU9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:uZ7mhNZJ7A83Wa2NH/CFzgrmP9I true sufficient binding region:61-382 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q01081-2 uniprotkb:A0A0S2Z3Z2 intact:EBI-10176676|ensembl:ENSP00000369629 intact:EBI-16470607 psi-mi:q01081-2(display_long)|uniprotkb:U2 auxiliary factor 35 kDa subunit(gene name synonym)|uniprotkb:U2 small nuclear RNA auxiliary factor 1(gene name synonym)|uniprotkb:U2 snRNP auxiliary factor small subunit(gene name synonym)|uniprotkb:U2AF35(gene name synonym)|uniprotkb:U2AFBP(gene name synonym)|uniprotkb:FP793(orf name)|uniprotkb:U2AF35b(isoform synonym)|uniprotkb:U2AF1(gene name)|psi-mi:U2AF1(display_short) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470935 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000160201(gene)|ensembl:ENST00000380276(transcript)|intact:EBI-632461(isoform-parent)|uniprotkb:Q01081-2(isoform-parent)|entrezgene/locuslink:7307(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431062(see-also) isoform-comment:Interacts with U2AF2 and stimulates U2AF splicing activity in vitro. Less efficient than isoform 1. Contains a N6-methyllysine at position 39. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:I2H9SB2+JgQhbwqaM8J+IE55xNg9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:WQ6UrZX4pCLZ6NDfN6Wy0gdFkZw true sufficient binding region:74-240 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q01081-2 uniprotkb:A0A0S2Z442 intact:EBI-10176676|ensembl:ENSP00000369629 intact:EBI-16435864 psi-mi:q01081-2(display_long)|uniprotkb:U2 auxiliary factor 35 kDa subunit(gene name synonym)|uniprotkb:U2 small nuclear RNA auxiliary factor 1(gene name synonym)|uniprotkb:U2 snRNP auxiliary factor small subunit(gene name synonym)|uniprotkb:U2AF35(gene name synonym)|uniprotkb:U2AFBP(gene name synonym)|uniprotkb:FP793(orf name)|uniprotkb:U2AF35b(isoform synonym)|uniprotkb:U2AF1(gene name)|psi-mi:U2AF1(display_short) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470916 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000160201(gene)|ensembl:ENST00000380276(transcript)|intact:EBI-632461(isoform-parent)|uniprotkb:Q01081-2(isoform-parent)|entrezgene/locuslink:7307(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431062(see-also) isoform-comment:Interacts with U2AF2 and stimulates U2AF splicing activity in vitro. Less efficient than isoform 1. Contains a N6-methyllysine at position 39. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:I2H9SB2+JgQhbwqaM8J+IE55xNg9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:/+yoHs1uVYi535kxEHc07BQnGAg true sufficient binding region:74-240 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q01081-2 uniprotkb:A0A0S2Z3Y6 intact:EBI-10176676|ensembl:ENSP00000369629 intact:EBI-16435852 psi-mi:q01081-2(display_long)|uniprotkb:U2 auxiliary factor 35 kDa subunit(gene name synonym)|uniprotkb:U2 small nuclear RNA auxiliary factor 1(gene name synonym)|uniprotkb:U2 snRNP auxiliary factor small subunit(gene name synonym)|uniprotkb:U2AF35(gene name synonym)|uniprotkb:U2AFBP(gene name synonym)|uniprotkb:FP793(orf name)|uniprotkb:U2AF35b(isoform synonym)|uniprotkb:U2AF1(gene name)|psi-mi:U2AF1(display_short) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470897 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000160201(gene)|ensembl:ENST00000380276(transcript)|intact:EBI-632461(isoform-parent)|uniprotkb:Q01081-2(isoform-parent)|entrezgene/locuslink:7307(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16431062(see-also) isoform-comment:Interacts with U2AF2 and stimulates U2AF splicing activity in vitro. Less efficient than isoform 1. Contains a N6-methyllysine at position 39. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:I2H9SB2+JgQhbwqaM8J+IE55xNg9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:RuBM0BsVo6w8+UpQ5FFd+yDPXoo true sufficient binding region:74-240 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z3Z2 - intact:EBI-16470607 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470881 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430640(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:qPyYNf3AW/o45LnJgoaqQtGMh/c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z442 - intact:EBI-16435864 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470865 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430640(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:7KfI/IuxpOVxNsQnM+rFT+OqMFY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z3Y6 - intact:EBI-16435852 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470849 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430640(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:0cd2qAiRvZB5gz4DYRNYLlVpPdQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2K1 uniprotkb:A0A0S2Z3Z2 intact:EBI-2682961|uniprotkb:Q86SW8|uniprotkb:A8K6S8|ensembl:ENSP00000451000|ensembl:ENSP00000506911 intact:EBI-16470607 psi-mi:zbtb1_human(display_long)|uniprotkb:KIAA0997(gene name synonym)|uniprotkb:ZBTB1(gene name)|psi-mi:ZBTB1(display_short) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470833 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011534868.1|refseq:XP_011534870.1|refseq:XP_005267467.1|refseq:NP_001116801.1|refseq:NP_055765.2|refseq:XP_016876583.1|refseq:XP_016876584.1|ensembl:ENSG00000126804(gene)|ensembl:ENST00000554015(transcript)|ensembl:ENST00000683701(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0002711"(positive regulation of T cell mediated immunity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006281"(DNA repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016604"(nuclear body)|go:"GO:0019985"(translesion synthesis)|go:"GO:0030154"(cell differentiation)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032825"(positive regulation of natural killer cell differentiation)|go:"GO:0034644"(cellular response to UV)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048538"(thymus development)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0070530"(K63-linked polyubiquitin modification-dependent protein binding)|go:"GO:2000176"(positive regulation of pro-T cell differentiation)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|entrezgene/locuslink:22890(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430450(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:63ZwzhNK0fJBMGUMPfeRJnGqrcE9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:iuDRKMAIvngxSYEmJd9FucPNML4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2K1 uniprotkb:A0A0S2Z442 intact:EBI-2682961|uniprotkb:Q86SW8|uniprotkb:A8K6S8|ensembl:ENSP00000451000|ensembl:ENSP00000506911 intact:EBI-16435864 psi-mi:zbtb1_human(display_long)|uniprotkb:KIAA0997(gene name synonym)|uniprotkb:ZBTB1(gene name)|psi-mi:ZBTB1(display_short) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470817 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011534868.1|refseq:XP_011534870.1|refseq:XP_005267467.1|refseq:NP_001116801.1|refseq:NP_055765.2|refseq:XP_016876583.1|refseq:XP_016876584.1|ensembl:ENSG00000126804(gene)|ensembl:ENST00000554015(transcript)|ensembl:ENST00000683701(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0002711"(positive regulation of T cell mediated immunity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006281"(DNA repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016604"(nuclear body)|go:"GO:0019985"(translesion synthesis)|go:"GO:0030154"(cell differentiation)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032825"(positive regulation of natural killer cell differentiation)|go:"GO:0034644"(cellular response to UV)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048538"(thymus development)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0070530"(K63-linked polyubiquitin modification-dependent protein binding)|go:"GO:2000176"(positive regulation of pro-T cell differentiation)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|entrezgene/locuslink:22890(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430450(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:63ZwzhNK0fJBMGUMPfeRJnGqrcE9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:2R8mLyLilSQ8PzxNivVTUxy1Jcs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2K1 uniprotkb:A0A0S2Z3Y6 intact:EBI-2682961|uniprotkb:Q86SW8|uniprotkb:A8K6S8|ensembl:ENSP00000451000|ensembl:ENSP00000506911 intact:EBI-16435852 psi-mi:zbtb1_human(display_long)|uniprotkb:KIAA0997(gene name synonym)|uniprotkb:ZBTB1(gene name)|psi-mi:ZBTB1(display_short) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470801 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011534868.1|refseq:XP_011534870.1|refseq:XP_005267467.1|refseq:NP_001116801.1|refseq:NP_055765.2|refseq:XP_016876583.1|refseq:XP_016876584.1|ensembl:ENSG00000126804(gene)|ensembl:ENST00000554015(transcript)|ensembl:ENST00000683701(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0002711"(positive regulation of T cell mediated immunity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0006281"(DNA repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016604"(nuclear body)|go:"GO:0019985"(translesion synthesis)|go:"GO:0030154"(cell differentiation)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032825"(positive regulation of natural killer cell differentiation)|go:"GO:0034644"(cellular response to UV)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045582"(positive regulation of T cell differentiation)|go:"GO:0046872"(metal ion binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0048538"(thymus development)|go:"GO:0051260"(protein homooligomerization)|go:"GO:0070530"(K63-linked polyubiquitin modification-dependent protein binding)|go:"GO:2000176"(positive regulation of pro-T cell differentiation)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|entrezgene/locuslink:22890(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430450(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:63ZwzhNK0fJBMGUMPfeRJnGqrcE9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:N8UsnHnLD2V5Yvg3pKpJxC/YKqA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WVE0 uniprotkb:A0A0S2Z3Z2 intact:EBI-16430415|ensembl:ENSP00000372202|ensembl:ENSP00000372206|uniprotkb:B5G4V1 intact:EBI-16470607 psi-mi:efmt1_human(display_long)|uniprotkb:"N(6)-adenine-specific DNA methyltransferase 2"(gene name synonym)|uniprotkb:Protein-lysine N-methyltransferase N6AMT2(gene name synonym)|uniprotkb:EEF1AKMT1(gene name)|psi-mi:EEF1AKMT1(display_short)|uniprotkb:N6AMT2(gene name synonym)|uniprotkb:eEF1A-KMT(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470785 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000150456(gene)|ensembl:ENST00000382754(transcript)|ensembl:ENST00000382758(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0018022"(peptidyl-lysine methylation)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR019369|interpro:IPR029063|interpro:IPR041370|reactome:R-HSA-8876725|refseq:NP_001305868.1|refseq:NP_777588.1|refseq:XP_016875921.1|entrezgene/locuslink:221143(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430440(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qKNqMbQPejzDNq5IswwsVDIUopY9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:ShScts8C1x7m12Qnrh19n2ggep4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WVE0 uniprotkb:A0A0S2Z442 intact:EBI-16430415|ensembl:ENSP00000372202|ensembl:ENSP00000372206|uniprotkb:B5G4V1 intact:EBI-16435864 psi-mi:efmt1_human(display_long)|uniprotkb:"N(6)-adenine-specific DNA methyltransferase 2"(gene name synonym)|uniprotkb:Protein-lysine N-methyltransferase N6AMT2(gene name synonym)|uniprotkb:EEF1AKMT1(gene name)|psi-mi:EEF1AKMT1(display_short)|uniprotkb:N6AMT2(gene name synonym)|uniprotkb:eEF1A-KMT(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16470769 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000150456(gene)|ensembl:ENST00000382754(transcript)|ensembl:ENST00000382758(transcript)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005829"(cytosol)|go:"GO:0006479"(protein methylation)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0018022"(peptidyl-lysine methylation)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR019369|interpro:IPR029063|interpro:IPR041370|reactome:R-HSA-8876725|refseq:NP_001305868.1|refseq:NP_777588.1|refseq:XP_016875921.1|entrezgene/locuslink:221143(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16430440(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qKNqMbQPejzDNq5IswwsVDIUopY9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:vbODVokgUFMGiO+NXwcesmVGLoE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15156-2 uniprotkb:A0A0S2Z3Z2 intact:EBI-11522250|ensembl:ENSP00000406286 intact:EBI-16470607 psi-mi:o15156-2(display_long)|uniprotkb:ZBTB7B(gene name)|psi-mi:ZBTB7B(display_short)|uniprotkb:Krueppel-related zinc finger protein cKrox(gene name synonym)|uniprotkb:T-helper-inducing POZ/Krueppel-like factor(gene name synonym)|uniprotkb:ZBTB15(gene name synonym)|uniprotkb:ZFP67(gene name synonym)|uniprotkb:ZNF857B(gene name synonym)|uniprotkb:Zinc finger and BTB domain-containing protein 15(gene name synonym)|uniprotkb:Zinc finger protein 67 homolog(gene name synonym)|uniprotkb:Zinc finger protein 857B(gene name synonym)|uniprotkb:Zinc finger protein Th-POK(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471440 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740434(isoform-parent)|ensembl:ENSG00000160685(gene)|ensembl:ENST00000417934(transcript)|uniprotkb:O15156-2(isoform-parent)|entrezgene/locuslink:51043(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438334(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:41NEFYyprTXI+fOHVFh78TPKF289606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:e+8ppS7I8y+QjONDJF0qi6zD+yI true sufficient binding region:35-573 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H000 uniprotkb:A0A0S2Z442 intact:EBI-2341005|uniprotkb:A6NIA2|uniprotkb:Q9BUY2|uniprotkb:B3KRC5|uniprotkb:Q96BD4|uniprotkb:Q8N391|uniprotkb:Q9NRY1|uniprotkb:B4DPR4|intact:EBI-11126681|ensembl:ENSP00000170447|ensembl:ENSP00000502893 intact:EBI-16435864 psi-mi:mkrn2_human(display_long)|uniprotkb:MKRN2(gene name)|psi-mi:MKRN2(display_short)|uniprotkb:RNF62(gene name synonym)|uniprotkb:RING finger protein 62(gene name synonym)|uniprotkb:HSPC070(orf name)|uniprotkb:RING-type E3 ubiquitin transferase makorin-2(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471048 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_054879.3|refseq:NP_001258636.1|ensembl:ENSG00000075975(gene)|ensembl:ENST00000170447(transcript)|ensembl:ENST00000677816(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR026293|interpro:IPR036855|interpro:IPR041367|mint:Q9H000|entrezgene/locuslink:23609(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16432997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZI7Jr4Fd52sQnfeNXXcZ0NscyD89606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:06FbNpECo08K4ooOSd9T7gkz45s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H000 uniprotkb:A0A0S2Z3Z2 intact:EBI-2341005|uniprotkb:A6NIA2|uniprotkb:Q9BUY2|uniprotkb:B3KRC5|uniprotkb:Q96BD4|uniprotkb:Q8N391|uniprotkb:Q9NRY1|uniprotkb:B4DPR4|intact:EBI-11126681|ensembl:ENSP00000170447|ensembl:ENSP00000502893 intact:EBI-16470607 psi-mi:mkrn2_human(display_long)|uniprotkb:MKRN2(gene name)|psi-mi:MKRN2(display_short)|uniprotkb:RNF62(gene name synonym)|uniprotkb:RING finger protein 62(gene name synonym)|uniprotkb:HSPC070(orf name)|uniprotkb:RING-type E3 ubiquitin transferase makorin-2(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471064 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_054879.3|refseq:NP_001258636.1|ensembl:ENSG00000075975(gene)|ensembl:ENST00000170447(transcript)|ensembl:ENST00000677816(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR026293|interpro:IPR036855|interpro:IPR041367|mint:Q9H000|entrezgene/locuslink:23609(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16432997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZI7Jr4Fd52sQnfeNXXcZ0NscyD89606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:aEw8vlMRdLtPsdTUtL2KCsyBCzY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P04637 uniprotkb:A0A0S2Z3Y6 intact:EBI-366083|uniprotkb:Q15086|uniprotkb:Q15087|uniprotkb:Q15088|uniprotkb:Q16535|uniprotkb:Q16807|uniprotkb:Q16808|uniprotkb:Q16809|uniprotkb:Q16810|uniprotkb:Q16811|uniprotkb:Q16848|uniprotkb:Q86UG1|uniprotkb:Q8J016|uniprotkb:Q99659|uniprotkb:Q9BTM4|uniprotkb:Q9HAQ8|uniprotkb:Q9NP68|uniprotkb:Q9NPJ2|uniprotkb:Q9NZD0|uniprotkb:Q9UBI2|uniprotkb:Q9UQ61|ensembl:ENSP00000269305|ensembl:ENSP00000391478|intact:EBI-28980681|uniprotkb:Q2XN98|uniprotkb:Q3LRW1|uniprotkb:Q3LRW2|uniprotkb:Q3LRW3|uniprotkb:Q3LRW4|uniprotkb:Q3LRW5 intact:EBI-16435852 psi-mi:p53_human(display_long)|uniprotkb:TP53(gene name)|psi-mi:TP53(display_short)|uniprotkb:P53(gene name synonym)|uniprotkb:Tumor suppressor p53(gene name synonym)|uniprotkb:Phosphoprotein p53(gene name synonym)|uniprotkb:Antigen NY-CO-13(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471080 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001263624.1|refseq:NP_001263625.1|ensembl:ENSG00000141510(gene)|ensembl:ENST00000269305(transcript)|ensembl:ENST00000445888(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001046"(core promoter sequence-specific DNA binding)|go:"GO:0001094"(TFIID-class transcription factor complex binding)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001756"(somitogenesis)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0002020"(protease binding)|go:"GO:0002039"(p53 binding)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0002309"(T cell proliferation involved in immune response)|go:"GO:0002360"(T cell lineage commitment)|go:"GO:0002326"(B cell lineage commitment)|go:"GO:0031497"(chromatin assembly)|go:"GO:0031571"(mitotic G1 DNA damage checkpoint signaling)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034103"(regulation of tissue remodeling)|go:"GO:0034613"(cellular protein localization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0035033"(histone deacetylase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035690"|go:"GO:0035794"(positive regulation of mitochondrial membrane permeability)|go:"GO:0035861"(site of double-strand break)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0036310"(ATP-dependent DNA/DNA annealing activity)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042771"(intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:0042802"(identical protein binding)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0002931"(response to ischemia)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005507"(copper ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006914"(autophagy)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006977"(DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0006983"(ER overload response)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007265"(Ras protein signal transduction)|go:"GO:0007369"(gastrulation)|go:"GO:0007406"(negative regulation of neuroblast proliferation)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043504"(mitochondrial DNA repair)|go:"GO:0043516"(regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0060333"(interferon-gamma-mediated signaling pathway)|go:"GO:0043621"(protein self-association)|go:"GO:0045861"(negative regulation of proteolysis)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046677"(response to antibiotic)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048147"(negative regulation of fibroblast proliferation)|go:"GO:0048512"(circadian behavior)|go:"GO:0048539"(bone marrow development)|go:"GO:0048568"(embryonic organ development)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0050821"(protein stabilization)|go:"GO:0051087"(chaperone binding)|go:"GO:0051097"(negative regulation of helicase activity)|go:"GO:0051262"(protein tetramerization)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051721"(protein phosphatase 2A binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061419"(positive regulation of transcription from RNA polymerase II promoter in response to hypoxia)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0062100"(positive regulation of programmed necrotic cell death)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0060411"(cardiac septum morphogenesis)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070245"(positive regulation of thymocyte apoptotic process)|go:"GO:0070266"(necroptotic process)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071479"(cellular response to ionizing radiation)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0071494"(cellular response to UV-C)|go:"GO:0072331"(signal transduction by p53 class mediator)|go:"GO:0072332"(intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:0072717"(cellular response to actinomycin D)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090343"(positive regulation of cell aging)|go:"GO:0090399"(replicative senescence)|go:"GO:0090403"(oxidative stress-induced premature senescence)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|go:"GO:0097252"(oligodendrocyte apoptotic process)|go:"GO:0097371"(MDM2/MDM4 family protein binding)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:1900119"(positive regulation of execution phase of apoptosis)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1902108"(regulation of mitochondrial membrane permeability involved in apoptotic process)|go:"GO:1902253"(regulation of intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1903799"(negative regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1903800"(positive regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1904024"(negative regulation of glucose catabolic process to lactate via pyruvate)|go:"GO:1905856"(negative regulation of pentose-phosphate shunt)|go:"GO:1990144"(intrinsic apoptotic signaling pathway in response to hypoxia)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:2000269"(regulation of fibroblast apoptotic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000379"(positive regulation of reactive oxygen species metabolic process)|go:"GO:2000772"(regulation of cellular senescence)|go:"GO:2001244"(positive regulation of intrinsic apoptotic signaling pathway)|interpro:IPR002117(p53 tumor antigen)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR010991(p53, tetramerisation)|interpro:IPR011615(p53, DNA-binding)|go:"GO:0007569"(cell aging)|go:"GO:0008104"(protein localization)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008156"(negative regulation of DNA replication)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0008340"(determination of adult lifespan)|go:"GO:0009299"(mRNA transcription)|go:"GO:0009303"(rRNA transcription)|go:"GO:0009651"(response to salt stress)|go:"GO:0010165"(response to X-ray)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010666"(positive regulation of cardiac muscle cell apoptotic process)|go:"GO:0016032"(viral process)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016605"(PML body)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021549"(cerebellum development)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030330"(DNA damage response, signal transduction by p53 class mediator)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031065"(positive regulation of histone deacetylation)|interpro:IPR012346(p53 and RUNT-type transcription factor, DNA-binding)|interpro:IPR013872("p53 transactivation domain (TAD)")|interpro:IPR036674|interpro:IPR040926|rcsb pdb:2ATA|rcsb pdb:2B3G|rcsb pdb:2BIM|rcsb pdb:2BIN|rcsb pdb:2BIO|rcsb pdb:2BIP|rcsb pdb:2AHI|rcsb pdb:2BIQ|rcsb pdb:2F1X|rcsb pdb:2FEJ|rcsb pdb:2FOJ|rcsb pdb:2FOO|rcsb pdb:2GS0|rcsb pdb:2H1L|rcsb pdb:2H2D|rcsb pdb:2H2F|rcsb pdb:2H4F|rcsb pdb:2H4H|rcsb pdb:2H4J|rcsb pdb:2H59|rcsb pdb:2J0Z|rcsb pdb:2J10|rcsb pdb:2J11|rcsb pdb:2J1W|rcsb pdb:2J1X|rcsb pdb:2J1Y|rcsb pdb:2J1Z|rcsb pdb:2J20|rcsb pdb:2J21|rcsb pdb:2K8F|rcsb pdb:2L14|rcsb pdb:2LY4|rcsb pdb:2MEJ|rcsb pdb:2MWO|rcsb pdb:2MWP|rcsb pdb:2MWY|rcsb pdb:2MZD|rcsb pdb:2OCJ|rcsb pdb:2PCX|rcsb pdb:1A1U|rcsb pdb:1AIE|rcsb pdb:1C26|rcsb pdb:1DT7|rcsb pdb:1GZH|rcsb pdb:1H26|rcsb pdb:1HS5|rcsb pdb:1JSP|rcsb pdb:1KZY|rcsb pdb:1MA3|rcsb pdb:1OLG|rcsb pdb:1OLH|rcsb pdb:1PES|rcsb pdb:1PET|mint:P04637|rcsb pdb:1SAE|rcsb pdb:1SAF|rcsb pdb:1SAK|rcsb pdb:1SAL|rcsb pdb:1TSR|rcsb pdb:1TUP|rcsb pdb:1UOL|rcsb pdb:1XQH|rcsb pdb:1YC5|rcsb pdb:1YCQ|rcsb pdb:1YCR|rcsb pdb:1YCS|rcsb pdb:2AC0|rcsb pdb:2ADY|refseq:NP_000537.3|refseq:NP_001119584.1|refseq:NP_001119585.1|refseq:NP_001119586.1|refseq:NP_001119587.1|refseq:NP_001119588.1|refseq:NP_001119589.1|rcsb pdb:2RUK|rcsb pdb:2VUK|rcsb pdb:3Q06|rcsb pdb:2WGX|rcsb pdb:2X0U|rcsb pdb:2X0V|rcsb pdb:2X0W|rcsb pdb:2XWR|rcsb pdb:2YBG|rcsb pdb:2YDR|rcsb pdb:2Z5S|rcsb pdb:2Z5T|rcsb pdb:3SAK|rcsb pdb:3D05|rcsb pdb:3D06|rcsb pdb:3D07|rcsb pdb:3D08|rcsb pdb:3D09|rcsb pdb:3D0A|rcsb pdb:3DAB|rcsb pdb:3DAC|rcsb pdb:3IGK|rcsb pdb:3IGL|rcsb pdb:3KMD|rcsb pdb:3TG5|rcsb pdb:3KZ8|rcsb pdb:3LW1|rcsb pdb:3OQ5|rcsb pdb:3PDH|rcsb pdb:3Q01|rcsb pdb:3Q05|rcsb pdb:3TS8|rcsb pdb:3ZME|rcsb pdb:4AGM|rcsb pdb:4AGN|rcsb pdb:4AGO|rcsb pdb:4AGP|rcsb pdb:4AGQ|rcsb pdb:4BUZ|rcsb pdb:4BV2|rcsb pdb:4HFZ|rcsb pdb:4HJE|rcsb pdb:4IBQ|rcsb pdb:4IBS|rcsb pdb:4IBT|rcsb pdb:4IBU|rcsb pdb:4IBV|rcsb pdb:4IBW|rcsb pdb:4IBY|rcsb pdb:4IBZ|rcsb pdb:4IJT|rcsb pdb:4KVP|rcsb pdb:4LO9|rcsb pdb:4LOE|rcsb pdb:4LOF|rcsb pdb:4MZI|rcsb pdb:4MZR|rcsb pdb:4QO1|rcsb pdb:4RP6|rcsb pdb:4RP7|rcsb pdb:4X34|rcsb pdb:4XR8|rcsb pdb:4ZZJ|rcsb pdb:5A7B|rcsb pdb:5AB9|rcsb pdb:5ABA|rcsb pdb:4AGL|rcsb pdb:5AOI|rcsb pdb:5AOJ|rcsb pdb:5AOK|rcsb pdb:5AOL|rcsb pdb:5AOM|rcsb pdb:6XRE|rcsb pdb:7BWN|rcsb pdb:7DHY|rcsb pdb:7DHZ|rcsb pdb:7EL4|reactome:R-HSA-111448|reactome:R-HSA-139915|reactome:R-HSA-1912408|reactome:R-HSA-2559580|reactome:R-HSA-2559584|reactome:R-HSA-2559585|reactome:R-HSA-2559586|reactome:R-HSA-3232118|reactome:R-HSA-349425|reactome:R-HSA-390471|reactome:R-HSA-5620971|reactome:R-HSA-5628897|reactome:R-HSA-5689880|reactome:R-HSA-5689896|reactome:R-HSA-5693565|reactome:R-HSA-6785807|reactome:R-HSA-6796648|reactome:R-HSA-6803204|reactome:R-HSA-6803205|reactome:R-HSA-6803207|reactome:R-HSA-6803211|reactome:R-HSA-6804114|reactome:R-HSA-6804115|reactome:R-HSA-6804116|reactome:R-HSA-6804754|reactome:R-HSA-6804756|reactome:R-HSA-6804757|reactome:R-HSA-6804758|reactome:R-HSA-6804759|reactome:R-HSA-6804760|reactome:R-HSA-6811555|reactome:R-HSA-69473|reactome:R-HSA-69481|reactome:R-HSA-69541|reactome:R-HSA-69895|reactome:R-HSA-8852276|reactome:R-HSA-8853884|reactome:R-HSA-8941855|reactome:R-HSA-8943724|reactome:R-HSA-983231|rcsb pdb:5ECG|rcsb pdb:5G4M|rcsb pdb:5G4N|rcsb pdb:5BUA|rcsb pdb:5G4O|rcsb pdb:5HOU|rcsb pdb:5HP0|rcsb pdb:5HPD|rcsb pdb:5LAP|rcsb pdb:5LGY|rcsb pdb:5MCT|rcsb pdb:5MCU|rcsb pdb:5MCV|rcsb pdb:5MCW|rcsb pdb:5MF7|rcsb pdb:5MG7|rcsb pdb:5MHC|rcsb pdb:5MOC|rcsb pdb:5O1A|rcsb pdb:5O1B|rcsb pdb:5O1C|rcsb pdb:5O1D|rcsb pdb:5O1E|rcsb pdb:5O1F|rcsb pdb:5O1G|rcsb pdb:5O1H|rcsb pdb:5O1I|rcsb pdb:5OL0|rcsb pdb:5UN8|rcsb pdb:5XZC|rcsb pdb:6FF9|rcsb pdb:6FJ5|rcsb pdb:6GGA|rcsb pdb:6GGB|rcsb pdb:6GGC|rcsb pdb:6GGD|rcsb pdb:6GGE|rcsb pdb:6GGF|rcsb pdb:6LHD|rcsb pdb:6R5L|rcsb pdb:6RJZ|rcsb pdb:6RK8|rcsb pdb:6RKI|rcsb pdb:6RKK|rcsb pdb:6RKM|rcsb pdb:6RL3|rcsb pdb:6RL4|rcsb pdb:6RL6|rcsb pdb:6RM5|rcsb pdb:6RM7|rcsb pdb:6RWH|rcsb pdb:6RWI|rcsb pdb:6RWS|rcsb pdb:6RWU|rcsb pdb:6RX2|rcsb pdb:6RZ3|rcsb pdb:6S39|rcsb pdb:6S40|rcsb pdb:6S9Q|rcsb pdb:6SHZ|rcsb pdb:6SI0|rcsb pdb:6SI1|rcsb pdb:6SI2|rcsb pdb:6SI3|rcsb pdb:6SI4|rcsb pdb:6SIN|rcsb pdb:6SIO|rcsb pdb:6SIP|rcsb pdb:6SIQ|rcsb pdb:6SL6|rcsb pdb:6SLV|rcsb pdb:6T58|rcsb pdb:6V4F|rcsb pdb:6V4H|rcsb pdb:6VQO|rcsb pdb:6VR1|rcsb pdb:6VR5|rcsb pdb:6VRM|rcsb pdb:6VRN|rcsb pdb:6W51|rcsb pdb:6S3C|ensembl:ENSP00000269305|ensembl:ENST00000420246|ensembl:ENSP00000391127|ensembl:ENSP00000391478|ensembl:ENST00000455263|ensembl:ENSP00000398846|ensembl:ENST00000504290|ensembl:ENSP00000484409|ensembl:ENST00000504937|ensembl:ENSP00000481179|ensembl:ENST00000510385|ensembl:ENSP00000478499|ensembl:ENST00000610292|ensembl:ENSP00000478219|ensembl:ENST00000610538|ensembl:ENSP00000480868|ensembl:ENST00000619485|ensembl:ENSP00000482537|ensembl:ENST00000620739|ensembl:ENSP00000481638|ensembl:ENST00000622645|ensembl:ENSP00000482222|refseq:NP_001119590.1|refseq:NP_001263626.1|refseq:NP_001263627.1|refseq:NP_001263628.1|refseq:NP_001263689.1|refseq:NP_001263690.1|dip:DIP-368N|entrezgene/locuslink:7157(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16433901(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fGN3kSCGIpi/D6d/X5kaB0Xu8/k9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:Liqj0Ux345wGV+oUgnf+BiIWHnk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P04637 uniprotkb:A0A0S2Z442 intact:EBI-366083|uniprotkb:Q15086|uniprotkb:Q15087|uniprotkb:Q15088|uniprotkb:Q16535|uniprotkb:Q16807|uniprotkb:Q16808|uniprotkb:Q16809|uniprotkb:Q16810|uniprotkb:Q16811|uniprotkb:Q16848|uniprotkb:Q86UG1|uniprotkb:Q8J016|uniprotkb:Q99659|uniprotkb:Q9BTM4|uniprotkb:Q9HAQ8|uniprotkb:Q9NP68|uniprotkb:Q9NPJ2|uniprotkb:Q9NZD0|uniprotkb:Q9UBI2|uniprotkb:Q9UQ61|ensembl:ENSP00000269305|ensembl:ENSP00000391478|intact:EBI-28980681|uniprotkb:Q2XN98|uniprotkb:Q3LRW1|uniprotkb:Q3LRW2|uniprotkb:Q3LRW3|uniprotkb:Q3LRW4|uniprotkb:Q3LRW5 intact:EBI-16435864 psi-mi:p53_human(display_long)|uniprotkb:TP53(gene name)|psi-mi:TP53(display_short)|uniprotkb:P53(gene name synonym)|uniprotkb:Tumor suppressor p53(gene name synonym)|uniprotkb:Phosphoprotein p53(gene name synonym)|uniprotkb:Antigen NY-CO-13(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471096 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001263624.1|refseq:NP_001263625.1|ensembl:ENSG00000141510(gene)|ensembl:ENST00000269305(transcript)|ensembl:ENST00000445888(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001046"(core promoter sequence-specific DNA binding)|go:"GO:0001094"(TFIID-class transcription factor complex binding)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001756"(somitogenesis)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0002020"(protease binding)|go:"GO:0002039"(p53 binding)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0002309"(T cell proliferation involved in immune response)|go:"GO:0002360"(T cell lineage commitment)|go:"GO:0002326"(B cell lineage commitment)|go:"GO:0031497"(chromatin assembly)|go:"GO:0031571"(mitotic G1 DNA damage checkpoint signaling)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034103"(regulation of tissue remodeling)|go:"GO:0034613"(cellular protein localization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0035033"(histone deacetylase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035690"|go:"GO:0035794"(positive regulation of mitochondrial membrane permeability)|go:"GO:0035861"(site of double-strand break)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0036310"(ATP-dependent DNA/DNA annealing activity)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042771"(intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:0042802"(identical protein binding)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0002931"(response to ischemia)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005507"(copper ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006914"(autophagy)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006977"(DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0006983"(ER overload response)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007265"(Ras protein signal transduction)|go:"GO:0007369"(gastrulation)|go:"GO:0007406"(negative regulation of neuroblast proliferation)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043504"(mitochondrial DNA repair)|go:"GO:0043516"(regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0060333"(interferon-gamma-mediated signaling pathway)|go:"GO:0043621"(protein self-association)|go:"GO:0045861"(negative regulation of proteolysis)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046677"(response to antibiotic)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048147"(negative regulation of fibroblast proliferation)|go:"GO:0048512"(circadian behavior)|go:"GO:0048539"(bone marrow development)|go:"GO:0048568"(embryonic organ development)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0050821"(protein stabilization)|go:"GO:0051087"(chaperone binding)|go:"GO:0051097"(negative regulation of helicase activity)|go:"GO:0051262"(protein tetramerization)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051721"(protein phosphatase 2A binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061419"(positive regulation of transcription from RNA polymerase II promoter in response to hypoxia)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0062100"(positive regulation of programmed necrotic cell death)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0060411"(cardiac septum morphogenesis)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070245"(positive regulation of thymocyte apoptotic process)|go:"GO:0070266"(necroptotic process)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071479"(cellular response to ionizing radiation)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0071494"(cellular response to UV-C)|go:"GO:0072331"(signal transduction by p53 class mediator)|go:"GO:0072332"(intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:0072717"(cellular response to actinomycin D)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090343"(positive regulation of cell aging)|go:"GO:0090399"(replicative senescence)|go:"GO:0090403"(oxidative stress-induced premature senescence)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|go:"GO:0097252"(oligodendrocyte apoptotic process)|go:"GO:0097371"(MDM2/MDM4 family protein binding)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:1900119"(positive regulation of execution phase of apoptosis)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1902108"(regulation of mitochondrial membrane permeability involved in apoptotic process)|go:"GO:1902253"(regulation of intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1903799"(negative regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1903800"(positive regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1904024"(negative regulation of glucose catabolic process to lactate via pyruvate)|go:"GO:1905856"(negative regulation of pentose-phosphate shunt)|go:"GO:1990144"(intrinsic apoptotic signaling pathway in response to hypoxia)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:2000269"(regulation of fibroblast apoptotic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000379"(positive regulation of reactive oxygen species metabolic process)|go:"GO:2000772"(regulation of cellular senescence)|go:"GO:2001244"(positive regulation of intrinsic apoptotic signaling pathway)|interpro:IPR002117(p53 tumor antigen)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR010991(p53, tetramerisation)|interpro:IPR011615(p53, DNA-binding)|go:"GO:0007569"(cell aging)|go:"GO:0008104"(protein localization)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008156"(negative regulation of DNA replication)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0008340"(determination of adult lifespan)|go:"GO:0009299"(mRNA transcription)|go:"GO:0009303"(rRNA transcription)|go:"GO:0009651"(response to salt stress)|go:"GO:0010165"(response to X-ray)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010666"(positive regulation of cardiac muscle cell apoptotic process)|go:"GO:0016032"(viral process)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016605"(PML body)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021549"(cerebellum development)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030330"(DNA damage response, signal transduction by p53 class mediator)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031065"(positive regulation of histone deacetylation)|interpro:IPR012346(p53 and RUNT-type transcription factor, DNA-binding)|interpro:IPR013872("p53 transactivation domain (TAD)")|interpro:IPR036674|interpro:IPR040926|rcsb pdb:2ATA|rcsb pdb:2B3G|rcsb pdb:2BIM|rcsb pdb:2BIN|rcsb pdb:2BIO|rcsb pdb:2BIP|rcsb pdb:2AHI|rcsb pdb:2BIQ|rcsb pdb:2F1X|rcsb pdb:2FEJ|rcsb pdb:2FOJ|rcsb pdb:2FOO|rcsb pdb:2GS0|rcsb pdb:2H1L|rcsb pdb:2H2D|rcsb pdb:2H2F|rcsb pdb:2H4F|rcsb pdb:2H4H|rcsb pdb:2H4J|rcsb pdb:2H59|rcsb pdb:2J0Z|rcsb pdb:2J10|rcsb pdb:2J11|rcsb pdb:2J1W|rcsb pdb:2J1X|rcsb pdb:2J1Y|rcsb pdb:2J1Z|rcsb pdb:2J20|rcsb pdb:2J21|rcsb pdb:2K8F|rcsb pdb:2L14|rcsb pdb:2LY4|rcsb pdb:2MEJ|rcsb pdb:2MWO|rcsb pdb:2MWP|rcsb pdb:2MWY|rcsb pdb:2MZD|rcsb pdb:2OCJ|rcsb pdb:2PCX|rcsb pdb:1A1U|rcsb pdb:1AIE|rcsb pdb:1C26|rcsb pdb:1DT7|rcsb pdb:1GZH|rcsb pdb:1H26|rcsb pdb:1HS5|rcsb pdb:1JSP|rcsb pdb:1KZY|rcsb pdb:1MA3|rcsb pdb:1OLG|rcsb pdb:1OLH|rcsb pdb:1PES|rcsb pdb:1PET|mint:P04637|rcsb pdb:1SAE|rcsb pdb:1SAF|rcsb pdb:1SAK|rcsb pdb:1SAL|rcsb pdb:1TSR|rcsb pdb:1TUP|rcsb pdb:1UOL|rcsb pdb:1XQH|rcsb pdb:1YC5|rcsb pdb:1YCQ|rcsb pdb:1YCR|rcsb pdb:1YCS|rcsb pdb:2AC0|rcsb pdb:2ADY|refseq:NP_000537.3|refseq:NP_001119584.1|refseq:NP_001119585.1|refseq:NP_001119586.1|refseq:NP_001119587.1|refseq:NP_001119588.1|refseq:NP_001119589.1|rcsb pdb:2RUK|rcsb pdb:2VUK|rcsb pdb:3Q06|rcsb pdb:2WGX|rcsb pdb:2X0U|rcsb pdb:2X0V|rcsb pdb:2X0W|rcsb pdb:2XWR|rcsb pdb:2YBG|rcsb pdb:2YDR|rcsb pdb:2Z5S|rcsb pdb:2Z5T|rcsb pdb:3SAK|rcsb pdb:3D05|rcsb pdb:3D06|rcsb pdb:3D07|rcsb pdb:3D08|rcsb pdb:3D09|rcsb pdb:3D0A|rcsb pdb:3DAB|rcsb pdb:3DAC|rcsb pdb:3IGK|rcsb pdb:3IGL|rcsb pdb:3KMD|rcsb pdb:3TG5|rcsb pdb:3KZ8|rcsb pdb:3LW1|rcsb pdb:3OQ5|rcsb pdb:3PDH|rcsb pdb:3Q01|rcsb pdb:3Q05|rcsb pdb:3TS8|rcsb pdb:3ZME|rcsb pdb:4AGM|rcsb pdb:4AGN|rcsb pdb:4AGO|rcsb pdb:4AGP|rcsb pdb:4AGQ|rcsb pdb:4BUZ|rcsb pdb:4BV2|rcsb pdb:4HFZ|rcsb pdb:4HJE|rcsb pdb:4IBQ|rcsb pdb:4IBS|rcsb pdb:4IBT|rcsb pdb:4IBU|rcsb pdb:4IBV|rcsb pdb:4IBW|rcsb pdb:4IBY|rcsb pdb:4IBZ|rcsb pdb:4IJT|rcsb pdb:4KVP|rcsb pdb:4LO9|rcsb pdb:4LOE|rcsb pdb:4LOF|rcsb pdb:4MZI|rcsb pdb:4MZR|rcsb pdb:4QO1|rcsb pdb:4RP6|rcsb pdb:4RP7|rcsb pdb:4X34|rcsb pdb:4XR8|rcsb pdb:4ZZJ|rcsb pdb:5A7B|rcsb pdb:5AB9|rcsb pdb:5ABA|rcsb pdb:4AGL|rcsb pdb:5AOI|rcsb pdb:5AOJ|rcsb pdb:5AOK|rcsb pdb:5AOL|rcsb pdb:5AOM|rcsb pdb:6XRE|rcsb pdb:7BWN|rcsb pdb:7DHY|rcsb pdb:7DHZ|rcsb pdb:7EL4|reactome:R-HSA-111448|reactome:R-HSA-139915|reactome:R-HSA-1912408|reactome:R-HSA-2559580|reactome:R-HSA-2559584|reactome:R-HSA-2559585|reactome:R-HSA-2559586|reactome:R-HSA-3232118|reactome:R-HSA-349425|reactome:R-HSA-390471|reactome:R-HSA-5620971|reactome:R-HSA-5628897|reactome:R-HSA-5689880|reactome:R-HSA-5689896|reactome:R-HSA-5693565|reactome:R-HSA-6785807|reactome:R-HSA-6796648|reactome:R-HSA-6803204|reactome:R-HSA-6803205|reactome:R-HSA-6803207|reactome:R-HSA-6803211|reactome:R-HSA-6804114|reactome:R-HSA-6804115|reactome:R-HSA-6804116|reactome:R-HSA-6804754|reactome:R-HSA-6804756|reactome:R-HSA-6804757|reactome:R-HSA-6804758|reactome:R-HSA-6804759|reactome:R-HSA-6804760|reactome:R-HSA-6811555|reactome:R-HSA-69473|reactome:R-HSA-69481|reactome:R-HSA-69541|reactome:R-HSA-69895|reactome:R-HSA-8852276|reactome:R-HSA-8853884|reactome:R-HSA-8941855|reactome:R-HSA-8943724|reactome:R-HSA-983231|rcsb pdb:5ECG|rcsb pdb:5G4M|rcsb pdb:5G4N|rcsb pdb:5BUA|rcsb pdb:5G4O|rcsb pdb:5HOU|rcsb pdb:5HP0|rcsb pdb:5HPD|rcsb pdb:5LAP|rcsb pdb:5LGY|rcsb pdb:5MCT|rcsb pdb:5MCU|rcsb pdb:5MCV|rcsb pdb:5MCW|rcsb pdb:5MF7|rcsb pdb:5MG7|rcsb pdb:5MHC|rcsb pdb:5MOC|rcsb pdb:5O1A|rcsb pdb:5O1B|rcsb pdb:5O1C|rcsb pdb:5O1D|rcsb pdb:5O1E|rcsb pdb:5O1F|rcsb pdb:5O1G|rcsb pdb:5O1H|rcsb pdb:5O1I|rcsb pdb:5OL0|rcsb pdb:5UN8|rcsb pdb:5XZC|rcsb pdb:6FF9|rcsb pdb:6FJ5|rcsb pdb:6GGA|rcsb pdb:6GGB|rcsb pdb:6GGC|rcsb pdb:6GGD|rcsb pdb:6GGE|rcsb pdb:6GGF|rcsb pdb:6LHD|rcsb pdb:6R5L|rcsb pdb:6RJZ|rcsb pdb:6RK8|rcsb pdb:6RKI|rcsb pdb:6RKK|rcsb pdb:6RKM|rcsb pdb:6RL3|rcsb pdb:6RL4|rcsb pdb:6RL6|rcsb pdb:6RM5|rcsb pdb:6RM7|rcsb pdb:6RWH|rcsb pdb:6RWI|rcsb pdb:6RWS|rcsb pdb:6RWU|rcsb pdb:6RX2|rcsb pdb:6RZ3|rcsb pdb:6S39|rcsb pdb:6S40|rcsb pdb:6S9Q|rcsb pdb:6SHZ|rcsb pdb:6SI0|rcsb pdb:6SI1|rcsb pdb:6SI2|rcsb pdb:6SI3|rcsb pdb:6SI4|rcsb pdb:6SIN|rcsb pdb:6SIO|rcsb pdb:6SIP|rcsb pdb:6SIQ|rcsb pdb:6SL6|rcsb pdb:6SLV|rcsb pdb:6T58|rcsb pdb:6V4F|rcsb pdb:6V4H|rcsb pdb:6VQO|rcsb pdb:6VR1|rcsb pdb:6VR5|rcsb pdb:6VRM|rcsb pdb:6VRN|rcsb pdb:6W51|rcsb pdb:6S3C|ensembl:ENSP00000269305|ensembl:ENST00000420246|ensembl:ENSP00000391127|ensembl:ENSP00000391478|ensembl:ENST00000455263|ensembl:ENSP00000398846|ensembl:ENST00000504290|ensembl:ENSP00000484409|ensembl:ENST00000504937|ensembl:ENSP00000481179|ensembl:ENST00000510385|ensembl:ENSP00000478499|ensembl:ENST00000610292|ensembl:ENSP00000478219|ensembl:ENST00000610538|ensembl:ENSP00000480868|ensembl:ENST00000619485|ensembl:ENSP00000482537|ensembl:ENST00000620739|ensembl:ENSP00000481638|ensembl:ENST00000622645|ensembl:ENSP00000482222|refseq:NP_001119590.1|refseq:NP_001263626.1|refseq:NP_001263627.1|refseq:NP_001263628.1|refseq:NP_001263689.1|refseq:NP_001263690.1|dip:DIP-368N|entrezgene/locuslink:7157(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16433901(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fGN3kSCGIpi/D6d/X5kaB0Xu8/k9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:7tKVcq/DsQho2jq5cVGNSsRdNmQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P04637 uniprotkb:A0A0S2Z3Z2 intact:EBI-366083|uniprotkb:Q15086|uniprotkb:Q15087|uniprotkb:Q15088|uniprotkb:Q16535|uniprotkb:Q16807|uniprotkb:Q16808|uniprotkb:Q16809|uniprotkb:Q16810|uniprotkb:Q16811|uniprotkb:Q16848|uniprotkb:Q86UG1|uniprotkb:Q8J016|uniprotkb:Q99659|uniprotkb:Q9BTM4|uniprotkb:Q9HAQ8|uniprotkb:Q9NP68|uniprotkb:Q9NPJ2|uniprotkb:Q9NZD0|uniprotkb:Q9UBI2|uniprotkb:Q9UQ61|ensembl:ENSP00000269305|ensembl:ENSP00000391478|intact:EBI-28980681|uniprotkb:Q2XN98|uniprotkb:Q3LRW1|uniprotkb:Q3LRW2|uniprotkb:Q3LRW3|uniprotkb:Q3LRW4|uniprotkb:Q3LRW5 intact:EBI-16470607 psi-mi:p53_human(display_long)|uniprotkb:TP53(gene name)|psi-mi:TP53(display_short)|uniprotkb:P53(gene name synonym)|uniprotkb:Tumor suppressor p53(gene name synonym)|uniprotkb:Phosphoprotein p53(gene name synonym)|uniprotkb:Antigen NY-CO-13(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471112 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001263624.1|refseq:NP_001263625.1|ensembl:ENSG00000141510(gene)|ensembl:ENST00000269305(transcript)|ensembl:ENST00000445888(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001046"(core promoter sequence-specific DNA binding)|go:"GO:0001094"(TFIID-class transcription factor complex binding)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001701"(in utero embryonic development)|go:"GO:0001756"(somitogenesis)|go:"GO:0001836"(release of cytochrome c from mitochondria)|go:"GO:0002020"(protease binding)|go:"GO:0002039"(p53 binding)|go:"GO:0002244"(hematopoietic progenitor cell differentiation)|go:"GO:0002309"(T cell proliferation involved in immune response)|go:"GO:0002360"(T cell lineage commitment)|go:"GO:0002326"(B cell lineage commitment)|go:"GO:0031497"(chromatin assembly)|go:"GO:0031571"(mitotic G1 DNA damage checkpoint signaling)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033077"(T cell differentiation in thymus)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034103"(regulation of tissue remodeling)|go:"GO:0034613"(cellular protein localization)|go:"GO:0034644"(cellular response to UV)|go:"GO:0035033"(histone deacetylase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035690"|go:"GO:0035794"(positive regulation of mitochondrial membrane permeability)|go:"GO:0035861"(site of double-strand break)|go:"GO:0036003"(positive regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0036310"(ATP-dependent DNA/DNA annealing activity)|go:"GO:0042149"(cellular response to glucose starvation)|go:"GO:0042771"(intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:0042802"(identical protein binding)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0002931"(response to ischemia)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005507"(copper ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005657"(replication fork)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006914"(autophagy)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0006977"(DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest)|go:"GO:0006978"(DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator)|go:"GO:0006983"(ER overload response)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007265"(Ras protein signal transduction)|go:"GO:0007369"(gastrulation)|go:"GO:0007406"(negative regulation of neuroblast proliferation)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0043504"(mitochondrial DNA repair)|go:"GO:0043516"(regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0043525"(positive regulation of neuron apoptotic process)|go:"GO:0060333"(interferon-gamma-mediated signaling pathway)|go:"GO:0043621"(protein self-association)|go:"GO:0045861"(negative regulation of proteolysis)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046677"(response to antibiotic)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048147"(negative regulation of fibroblast proliferation)|go:"GO:0048512"(circadian behavior)|go:"GO:0048539"(bone marrow development)|go:"GO:0048568"(embryonic organ development)|go:"GO:0050731"(positive regulation of peptidyl-tyrosine phosphorylation)|go:"GO:0050821"(protein stabilization)|go:"GO:0051087"(chaperone binding)|go:"GO:0051097"(negative regulation of helicase activity)|go:"GO:0051262"(protein tetramerization)|go:"GO:0051402"(neuron apoptotic process)|go:"GO:0051721"(protein phosphatase 2A binding)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0051974"(negative regulation of telomerase activity)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061419"(positive regulation of transcription from RNA polymerase II promoter in response to hypoxia)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0062100"(positive regulation of programmed necrotic cell death)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0060411"(cardiac septum morphogenesis)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070245"(positive regulation of thymocyte apoptotic process)|go:"GO:0070266"(necroptotic process)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:0071479"(cellular response to ionizing radiation)|go:"GO:0071480"(cellular response to gamma radiation)|go:"GO:0071494"(cellular response to UV-C)|go:"GO:0072331"(signal transduction by p53 class mediator)|go:"GO:0072332"(intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:0072717"(cellular response to actinomycin D)|go:"GO:0090200"(positive regulation of release of cytochrome c from mitochondria)|go:"GO:0090343"(positive regulation of cell aging)|go:"GO:0090399"(replicative senescence)|go:"GO:0090403"(oxidative stress-induced premature senescence)|go:"GO:0097193"(intrinsic apoptotic signaling pathway)|go:"GO:0097252"(oligodendrocyte apoptotic process)|go:"GO:0097371"(MDM2/MDM4 family protein binding)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0140296"(general transcription initiation factor binding)|go:"GO:1900119"(positive regulation of execution phase of apoptosis)|go:"GO:1901525"(negative regulation of mitophagy)|go:"GO:1902108"(regulation of mitochondrial membrane permeability involved in apoptotic process)|go:"GO:1902253"(regulation of intrinsic apoptotic signaling pathway by p53 class mediator)|go:"GO:1902895"(positive regulation of miRNA transcription)|go:"GO:1903799"(negative regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1903800"(positive regulation of production of miRNAs involved in gene silencing by miRNA)|go:"GO:1904024"(negative regulation of glucose catabolic process to lactate via pyruvate)|go:"GO:1905856"(negative regulation of pentose-phosphate shunt)|go:"GO:1990144"(intrinsic apoptotic signaling pathway in response to hypoxia)|go:"GO:1990248"(regulation of transcription from RNA polymerase II promoter in response to DNA damage)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:2000269"(regulation of fibroblast apoptotic process)|go:"GO:2000378"(negative regulation of reactive oxygen species metabolic process)|go:"GO:2000379"(positive regulation of reactive oxygen species metabolic process)|go:"GO:2000772"(regulation of cellular senescence)|go:"GO:2001244"(positive regulation of intrinsic apoptotic signaling pathway)|interpro:IPR002117(p53 tumor antigen)|interpro:IPR008967(p53-like transcription factor, DNA-binding)|interpro:IPR010991(p53, tetramerisation)|interpro:IPR011615(p53, DNA-binding)|go:"GO:0007569"(cell aging)|go:"GO:0008104"(protein localization)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008156"(negative regulation of DNA replication)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0008340"(determination of adult lifespan)|go:"GO:0009299"(mRNA transcription)|go:"GO:0009303"(rRNA transcription)|go:"GO:0009651"(response to salt stress)|go:"GO:0010165"(response to X-ray)|go:"GO:0010332"(response to gamma radiation)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0010666"(positive regulation of cardiac muscle cell apoptotic process)|go:"GO:0016032"(viral process)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016605"(PML body)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0021549"(cerebellum development)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0030330"(DNA damage response, signal transduction by p53 class mediator)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031065"(positive regulation of histone deacetylation)|interpro:IPR012346(p53 and RUNT-type transcription factor, DNA-binding)|interpro:IPR013872("p53 transactivation domain (TAD)")|interpro:IPR036674|interpro:IPR040926|rcsb pdb:2ATA|rcsb pdb:2B3G|rcsb pdb:2BIM|rcsb pdb:2BIN|rcsb pdb:2BIO|rcsb pdb:2BIP|rcsb pdb:2AHI|rcsb pdb:2BIQ|rcsb pdb:2F1X|rcsb pdb:2FEJ|rcsb pdb:2FOJ|rcsb pdb:2FOO|rcsb pdb:2GS0|rcsb pdb:2H1L|rcsb pdb:2H2D|rcsb pdb:2H2F|rcsb pdb:2H4F|rcsb pdb:2H4H|rcsb pdb:2H4J|rcsb pdb:2H59|rcsb pdb:2J0Z|rcsb pdb:2J10|rcsb pdb:2J11|rcsb pdb:2J1W|rcsb pdb:2J1X|rcsb pdb:2J1Y|rcsb pdb:2J1Z|rcsb pdb:2J20|rcsb pdb:2J21|rcsb pdb:2K8F|rcsb pdb:2L14|rcsb pdb:2LY4|rcsb pdb:2MEJ|rcsb pdb:2MWO|rcsb pdb:2MWP|rcsb pdb:2MWY|rcsb pdb:2MZD|rcsb pdb:2OCJ|rcsb pdb:2PCX|rcsb pdb:1A1U|rcsb pdb:1AIE|rcsb pdb:1C26|rcsb pdb:1DT7|rcsb pdb:1GZH|rcsb pdb:1H26|rcsb pdb:1HS5|rcsb pdb:1JSP|rcsb pdb:1KZY|rcsb pdb:1MA3|rcsb pdb:1OLG|rcsb pdb:1OLH|rcsb pdb:1PES|rcsb pdb:1PET|mint:P04637|rcsb pdb:1SAE|rcsb pdb:1SAF|rcsb pdb:1SAK|rcsb pdb:1SAL|rcsb pdb:1TSR|rcsb pdb:1TUP|rcsb pdb:1UOL|rcsb pdb:1XQH|rcsb pdb:1YC5|rcsb pdb:1YCQ|rcsb pdb:1YCR|rcsb pdb:1YCS|rcsb pdb:2AC0|rcsb pdb:2ADY|refseq:NP_000537.3|refseq:NP_001119584.1|refseq:NP_001119585.1|refseq:NP_001119586.1|refseq:NP_001119587.1|refseq:NP_001119588.1|refseq:NP_001119589.1|rcsb pdb:2RUK|rcsb pdb:2VUK|rcsb pdb:3Q06|rcsb pdb:2WGX|rcsb pdb:2X0U|rcsb pdb:2X0V|rcsb pdb:2X0W|rcsb pdb:2XWR|rcsb pdb:2YBG|rcsb pdb:2YDR|rcsb pdb:2Z5S|rcsb pdb:2Z5T|rcsb pdb:3SAK|rcsb pdb:3D05|rcsb pdb:3D06|rcsb pdb:3D07|rcsb pdb:3D08|rcsb pdb:3D09|rcsb pdb:3D0A|rcsb pdb:3DAB|rcsb pdb:3DAC|rcsb pdb:3IGK|rcsb pdb:3IGL|rcsb pdb:3KMD|rcsb pdb:3TG5|rcsb pdb:3KZ8|rcsb pdb:3LW1|rcsb pdb:3OQ5|rcsb pdb:3PDH|rcsb pdb:3Q01|rcsb pdb:3Q05|rcsb pdb:3TS8|rcsb pdb:3ZME|rcsb pdb:4AGM|rcsb pdb:4AGN|rcsb pdb:4AGO|rcsb pdb:4AGP|rcsb pdb:4AGQ|rcsb pdb:4BUZ|rcsb pdb:4BV2|rcsb pdb:4HFZ|rcsb pdb:4HJE|rcsb pdb:4IBQ|rcsb pdb:4IBS|rcsb pdb:4IBT|rcsb pdb:4IBU|rcsb pdb:4IBV|rcsb pdb:4IBW|rcsb pdb:4IBY|rcsb pdb:4IBZ|rcsb pdb:4IJT|rcsb pdb:4KVP|rcsb pdb:4LO9|rcsb pdb:4LOE|rcsb pdb:4LOF|rcsb pdb:4MZI|rcsb pdb:4MZR|rcsb pdb:4QO1|rcsb pdb:4RP6|rcsb pdb:4RP7|rcsb pdb:4X34|rcsb pdb:4XR8|rcsb pdb:4ZZJ|rcsb pdb:5A7B|rcsb pdb:5AB9|rcsb pdb:5ABA|rcsb pdb:4AGL|rcsb pdb:5AOI|rcsb pdb:5AOJ|rcsb pdb:5AOK|rcsb pdb:5AOL|rcsb pdb:5AOM|rcsb pdb:6XRE|rcsb pdb:7BWN|rcsb pdb:7DHY|rcsb pdb:7DHZ|rcsb pdb:7EL4|reactome:R-HSA-111448|reactome:R-HSA-139915|reactome:R-HSA-1912408|reactome:R-HSA-2559580|reactome:R-HSA-2559584|reactome:R-HSA-2559585|reactome:R-HSA-2559586|reactome:R-HSA-3232118|reactome:R-HSA-349425|reactome:R-HSA-390471|reactome:R-HSA-5620971|reactome:R-HSA-5628897|reactome:R-HSA-5689880|reactome:R-HSA-5689896|reactome:R-HSA-5693565|reactome:R-HSA-6785807|reactome:R-HSA-6796648|reactome:R-HSA-6803204|reactome:R-HSA-6803205|reactome:R-HSA-6803207|reactome:R-HSA-6803211|reactome:R-HSA-6804114|reactome:R-HSA-6804115|reactome:R-HSA-6804116|reactome:R-HSA-6804754|reactome:R-HSA-6804756|reactome:R-HSA-6804757|reactome:R-HSA-6804758|reactome:R-HSA-6804759|reactome:R-HSA-6804760|reactome:R-HSA-6811555|reactome:R-HSA-69473|reactome:R-HSA-69481|reactome:R-HSA-69541|reactome:R-HSA-69895|reactome:R-HSA-8852276|reactome:R-HSA-8853884|reactome:R-HSA-8941855|reactome:R-HSA-8943724|reactome:R-HSA-983231|rcsb pdb:5ECG|rcsb pdb:5G4M|rcsb pdb:5G4N|rcsb pdb:5BUA|rcsb pdb:5G4O|rcsb pdb:5HOU|rcsb pdb:5HP0|rcsb pdb:5HPD|rcsb pdb:5LAP|rcsb pdb:5LGY|rcsb pdb:5MCT|rcsb pdb:5MCU|rcsb pdb:5MCV|rcsb pdb:5MCW|rcsb pdb:5MF7|rcsb pdb:5MG7|rcsb pdb:5MHC|rcsb pdb:5MOC|rcsb pdb:5O1A|rcsb pdb:5O1B|rcsb pdb:5O1C|rcsb pdb:5O1D|rcsb pdb:5O1E|rcsb pdb:5O1F|rcsb pdb:5O1G|rcsb pdb:5O1H|rcsb pdb:5O1I|rcsb pdb:5OL0|rcsb pdb:5UN8|rcsb pdb:5XZC|rcsb pdb:6FF9|rcsb pdb:6FJ5|rcsb pdb:6GGA|rcsb pdb:6GGB|rcsb pdb:6GGC|rcsb pdb:6GGD|rcsb pdb:6GGE|rcsb pdb:6GGF|rcsb pdb:6LHD|rcsb pdb:6R5L|rcsb pdb:6RJZ|rcsb pdb:6RK8|rcsb pdb:6RKI|rcsb pdb:6RKK|rcsb pdb:6RKM|rcsb pdb:6RL3|rcsb pdb:6RL4|rcsb pdb:6RL6|rcsb pdb:6RM5|rcsb pdb:6RM7|rcsb pdb:6RWH|rcsb pdb:6RWI|rcsb pdb:6RWS|rcsb pdb:6RWU|rcsb pdb:6RX2|rcsb pdb:6RZ3|rcsb pdb:6S39|rcsb pdb:6S40|rcsb pdb:6S9Q|rcsb pdb:6SHZ|rcsb pdb:6SI0|rcsb pdb:6SI1|rcsb pdb:6SI2|rcsb pdb:6SI3|rcsb pdb:6SI4|rcsb pdb:6SIN|rcsb pdb:6SIO|rcsb pdb:6SIP|rcsb pdb:6SIQ|rcsb pdb:6SL6|rcsb pdb:6SLV|rcsb pdb:6T58|rcsb pdb:6V4F|rcsb pdb:6V4H|rcsb pdb:6VQO|rcsb pdb:6VR1|rcsb pdb:6VR5|rcsb pdb:6VRM|rcsb pdb:6VRN|rcsb pdb:6W51|rcsb pdb:6S3C|ensembl:ENSP00000269305|ensembl:ENST00000420246|ensembl:ENSP00000391127|ensembl:ENSP00000391478|ensembl:ENST00000455263|ensembl:ENSP00000398846|ensembl:ENST00000504290|ensembl:ENSP00000484409|ensembl:ENST00000504937|ensembl:ENSP00000481179|ensembl:ENST00000510385|ensembl:ENSP00000478499|ensembl:ENST00000610292|ensembl:ENSP00000478219|ensembl:ENST00000610538|ensembl:ENSP00000480868|ensembl:ENST00000619485|ensembl:ENSP00000482537|ensembl:ENST00000620739|ensembl:ENSP00000481638|ensembl:ENST00000622645|ensembl:ENSP00000482222|refseq:NP_001119590.1|refseq:NP_001263626.1|refseq:NP_001263627.1|refseq:NP_001263628.1|refseq:NP_001263689.1|refseq:NP_001263690.1|dip:DIP-368N|entrezgene/locuslink:7157(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16433901(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fGN3kSCGIpi/D6d/X5kaB0Xu8/k9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:RHTJT2pyAVS5RjL1jkpF5wDkHzo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y6B2 uniprotkb:A0A0S2Z3Y6 intact:EBI-1049975|uniprotkb:Q8N7I4|uniprotkb:Q9BZT9|uniprotkb:B2RD11|ensembl:ENSP00000431162 intact:EBI-16435852 psi-mi:eid1_human(display_long)|uniprotkb:EID1(gene name)|psi-mi:EID1(display_short)|uniprotkb:C15orf3(gene name synonym)|uniprotkb:CRI1(gene name synonym)|uniprotkb:RBP21(gene name synonym)|uniprotkb:PNAS-22(orf name)|uniprotkb:PTD014(orf name)|uniprotkb:E1A-like inhibitor of differentiation 1(gene name synonym)|uniprotkb:CREBBP/EP300 inhibitory protein 1(gene name synonym)|uniprotkb:21 kDa pRb-associated protein(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471128 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055150.1|ensembl:ENSG00000255302(gene)|ensembl:ENST00000530028(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0030154"(cell differentiation)|go:"GO:0035034"(histone acetyltransferase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0045595"(regulation of cell differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR033255|interpro:IPR033258|mint:Q9Y6B2|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|entrezgene/locuslink:23741(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435244(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VPSCn0cgSMX+Pl+QwutWWqZseLQ9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:peJopJ5DCJxPIP9eoi34XYmyL/w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y6B2 uniprotkb:A0A0S2Z442 intact:EBI-1049975|uniprotkb:Q8N7I4|uniprotkb:Q9BZT9|uniprotkb:B2RD11|ensembl:ENSP00000431162 intact:EBI-16435864 psi-mi:eid1_human(display_long)|uniprotkb:EID1(gene name)|psi-mi:EID1(display_short)|uniprotkb:C15orf3(gene name synonym)|uniprotkb:CRI1(gene name synonym)|uniprotkb:RBP21(gene name synonym)|uniprotkb:PNAS-22(orf name)|uniprotkb:PTD014(orf name)|uniprotkb:E1A-like inhibitor of differentiation 1(gene name synonym)|uniprotkb:CREBBP/EP300 inhibitory protein 1(gene name synonym)|uniprotkb:21 kDa pRb-associated protein(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471144 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055150.1|ensembl:ENSG00000255302(gene)|ensembl:ENST00000530028(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0030154"(cell differentiation)|go:"GO:0035034"(histone acetyltransferase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0045595"(regulation of cell differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR033255|interpro:IPR033258|mint:Q9Y6B2|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|entrezgene/locuslink:23741(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435244(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VPSCn0cgSMX+Pl+QwutWWqZseLQ9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:Xc7a+I1GsQMmOQz2E6An9nKuDDM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y6B2 uniprotkb:A0A0S2Z3Z2 intact:EBI-1049975|uniprotkb:Q8N7I4|uniprotkb:Q9BZT9|uniprotkb:B2RD11|ensembl:ENSP00000431162 intact:EBI-16470607 psi-mi:eid1_human(display_long)|uniprotkb:EID1(gene name)|psi-mi:EID1(display_short)|uniprotkb:C15orf3(gene name synonym)|uniprotkb:CRI1(gene name synonym)|uniprotkb:RBP21(gene name synonym)|uniprotkb:PNAS-22(orf name)|uniprotkb:PTD014(orf name)|uniprotkb:E1A-like inhibitor of differentiation 1(gene name synonym)|uniprotkb:CREBBP/EP300 inhibitory protein 1(gene name synonym)|uniprotkb:21 kDa pRb-associated protein(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471160 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055150.1|ensembl:ENSG00000255302(gene)|ensembl:ENST00000530028(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0030154"(cell differentiation)|go:"GO:0035034"(histone acetyltransferase regulator activity)|go:"GO:0035035"(histone acetyltransferase binding)|go:"GO:0045595"(regulation of cell differentiation)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR033255|interpro:IPR033258|mint:Q9Y6B2|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|entrezgene/locuslink:23741(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435244(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VPSCn0cgSMX+Pl+QwutWWqZseLQ9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:u2NqjNKAFDrBTFN17/yCl0lw8zI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435328 uniprotkb:A0A0S2Z3Y6 - intact:EBI-16435852 psi-mi:"ccsb orf id: 52859"(display_short)|psi-mi:EBI-16435328(display_long) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471176 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:64753(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435350(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FWTUx0ZMr4g1buyVnmwu2LBoxaU9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:B5fg2g+1/hWoGsxKwS5gB6HuaZ0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435328 uniprotkb:A0A0S2Z442 - intact:EBI-16435864 psi-mi:"ccsb orf id: 52859"(display_short)|psi-mi:EBI-16435328(display_long) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471192 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:64753(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435350(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FWTUx0ZMr4g1buyVnmwu2LBoxaU9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:hZ83uoTR5BFLbqnXFrvLuEdU8+Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435328 uniprotkb:A0A0S2Z3Z2 - intact:EBI-16470607 psi-mi:"ccsb orf id: 52859"(display_short)|psi-mi:EBI-16435328(display_long) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471208 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:64753(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435350(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FWTUx0ZMr4g1buyVnmwu2LBoxaU9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:eCMl4DnwjTG3V1AhgAmfP8CXyAE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z4N8 intact:EBI-16429055 intact:EBI-10181968|uniprotkb:Q5JPA9|uniprotkb:Q5EBL3|uniprotkb:A0AV13|uniprotkb:B4DUD3|ensembl:ENSP00000332170 - psi-mi:p4ha3_human(display_long)|uniprotkb:P4HA3(gene name)|psi-mi:P4HA3(display_short)|uniprotkb:Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3(gene name synonym)|uniprotkb:UNQ711/PRO1374(orf name) psi-mi:"ccsb isoform id: ndn_2"(display_short)|psi-mi:EBI-16429055(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471224 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001275677.1|refseq:NP_878907.1|ensembl:ENSG00000149380(gene)|ensembl:ENST00000331597(transcript)|go:"GO:0004656"(procollagen-proline 4-dioxygenase activity)|go:"GO:0005506"(iron ion binding)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0018401"(peptidyl-proline hydroxylation to 4-hydroxy-L-proline)|go:"GO:0031418"(L-ascorbic acid binding)|interpro:IPR005123("2OG-Fe(II) oxygenase")|interpro:IPR006620(Prolyl 4-hydroxylase, alpha subunit)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013547(Prolyl 4-hydroxylase alpha-subunit, N-terminal)|reactome:R-HSA-1650814|entrezgene/locuslink:283208(identity) entrezgene/locuslink:4692(identity) intact:EBI-16435854(see-also)|intact:EBI-16435866(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:d1yT0nxg2GYPUs3YnYr4MkodoAU9606 rogid:3/K9NpgPU43gRAJpUk7hAthiupg9606 rigid:xH+hDsYeO4A66g5TJ7EKs7XBREw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z4N8 uniprotkb:A0A0S2Z3Z2 intact:EBI-10181968|uniprotkb:Q5JPA9|uniprotkb:Q5EBL3|uniprotkb:A0AV13|uniprotkb:B4DUD3|ensembl:ENSP00000332170 intact:EBI-16470607 psi-mi:p4ha3_human(display_long)|uniprotkb:P4HA3(gene name)|psi-mi:P4HA3(display_short)|uniprotkb:Procollagen-proline,2-oxoglutarate-4-dioxygenase subunit alpha-3(gene name synonym)|uniprotkb:UNQ711/PRO1374(orf name) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471241 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001275677.1|refseq:NP_878907.1|ensembl:ENSG00000149380(gene)|ensembl:ENST00000331597(transcript)|go:"GO:0004656"(procollagen-proline 4-dioxygenase activity)|go:"GO:0005506"(iron ion binding)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0018401"(peptidyl-proline hydroxylation to 4-hydroxy-L-proline)|go:"GO:0031418"(L-ascorbic acid binding)|interpro:IPR005123("2OG-Fe(II) oxygenase")|interpro:IPR006620(Prolyl 4-hydroxylase, alpha subunit)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013547(Prolyl 4-hydroxylase alpha-subunit, N-terminal)|reactome:R-HSA-1650814|entrezgene/locuslink:283208(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16435854(see-also)|intact:EBI-16435866(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:d1yT0nxg2GYPUs3YnYr4MkodoAU9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:vJmNkxCaD9AB4v1X17w+jg+SX/g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:A0A0S2Z3Y6 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-16435852 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471258 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16437355(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:AgCCJLUnduhIDoGJIbH8wVF646w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:A0A0S2Z442 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-16435864 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16437355(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:FTrbG0AueCyEW+GgOfjieFqqRoc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:A0A0S2Z3Z2 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-16470607 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471290 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16437355(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:vH7e01MRnuWDuiMOuZXGkHKI6XM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96EV8 uniprotkb:A0A0S2Z3Y6 intact:EBI-465804|uniprotkb:Q5THY3|uniprotkb:Q5THY4|uniprotkb:Q96NV2|intact:EBI-28986386|ensembl:ENSP00000341680|uniprotkb:Q9H0U2|uniprotkb:Q9H3J5|uniprotkb:A8K3V3 intact:EBI-16435852 psi-mi:dtbp1_human(display_long)|uniprotkb:My031(orf name)|uniprotkb:DTNBP1(gene name)|psi-mi:DTNBP1(display_short)|uniprotkb:Dystrobrevin-binding protein 1(gene name synonym)|uniprotkb:Hermansky-Pudlak syndrome 7 protein(gene name synonym)|uniprotkb:Dysbindin-1(gene name synonym)|uniprotkb:BLOC1S8(gene name synonym)|uniprotkb:Biogenesis of lysosome-related organelles complex 1 subunit 8(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471306 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000047579(gene)|ensembl:ENST00000344537(transcript)|go:"GO:0001956"(positive regulation of neurotransmitter secretion)|go:"GO:0005634"(nucleus)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007596"(blood coagulation)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016528"(sarcoplasm)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030496"(midbody)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031083"(BLOC-1 complex)|go:"GO:0031175"(neuron projection development)|go:"GO:0031532"(actin cytoskeleton reorganization)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0043005"(neuron projection)|go:"GO:0043197"(dendritic spine)|go:"GO:0005737"(cytoplasm)|go:"GO:0043506"(regulation of JUN kinase activity)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0048813"(dendrite morphogenesis)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0060159"(regulation of dopamine receptor signaling pathway)|go:"GO:0071901"(negative regulation of protein serine/threonine kinase activity)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098686"(hippocampal mossy fiber to CA3 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR007531(Dysbindin)|reactome:R-HSA-432722|go:"GO:0048490"(anterograde synaptic vesicle transport)|refseq:NP_115498.2|refseq:NP_898861.1|refseq:NP_001258597.1|refseq:NP_001258598.1|ensembl:ENST00000338950|ensembl:ENSP00000344718|ensembl:ENSP00000341680|refseq:NP_001258596.1|entrezgene/locuslink:84062(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438141(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PBwxp1vobm9l5yGoqev97lzkMHg9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:V9mXo3hkQfeZjGJNjrnB38cMbCc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96EV8 uniprotkb:A0A0S2Z442 intact:EBI-465804|uniprotkb:Q5THY3|uniprotkb:Q5THY4|uniprotkb:Q96NV2|intact:EBI-28986386|ensembl:ENSP00000341680|uniprotkb:Q9H0U2|uniprotkb:Q9H3J5|uniprotkb:A8K3V3 intact:EBI-16435864 psi-mi:dtbp1_human(display_long)|uniprotkb:My031(orf name)|uniprotkb:DTNBP1(gene name)|psi-mi:DTNBP1(display_short)|uniprotkb:Dystrobrevin-binding protein 1(gene name synonym)|uniprotkb:Hermansky-Pudlak syndrome 7 protein(gene name synonym)|uniprotkb:Dysbindin-1(gene name synonym)|uniprotkb:BLOC1S8(gene name synonym)|uniprotkb:Biogenesis of lysosome-related organelles complex 1 subunit 8(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471322 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000047579(gene)|ensembl:ENST00000344537(transcript)|go:"GO:0001956"(positive regulation of neurotransmitter secretion)|go:"GO:0005634"(nucleus)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007596"(blood coagulation)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016528"(sarcoplasm)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030496"(midbody)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031083"(BLOC-1 complex)|go:"GO:0031175"(neuron projection development)|go:"GO:0031532"(actin cytoskeleton reorganization)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0043005"(neuron projection)|go:"GO:0043197"(dendritic spine)|go:"GO:0005737"(cytoplasm)|go:"GO:0043506"(regulation of JUN kinase activity)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0048813"(dendrite morphogenesis)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0060159"(regulation of dopamine receptor signaling pathway)|go:"GO:0071901"(negative regulation of protein serine/threonine kinase activity)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098686"(hippocampal mossy fiber to CA3 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR007531(Dysbindin)|reactome:R-HSA-432722|go:"GO:0048490"(anterograde synaptic vesicle transport)|refseq:NP_115498.2|refseq:NP_898861.1|refseq:NP_001258597.1|refseq:NP_001258598.1|ensembl:ENST00000338950|ensembl:ENSP00000344718|ensembl:ENSP00000341680|refseq:NP_001258596.1|entrezgene/locuslink:84062(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438141(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PBwxp1vobm9l5yGoqev97lzkMHg9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:m6XiPoCb8/HojF7eoWUgaDD92XM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96EV8 uniprotkb:A0A0S2Z3Z2 intact:EBI-465804|uniprotkb:Q5THY3|uniprotkb:Q5THY4|uniprotkb:Q96NV2|intact:EBI-28986386|ensembl:ENSP00000341680|uniprotkb:Q9H0U2|uniprotkb:Q9H3J5|uniprotkb:A8K3V3 intact:EBI-16470607 psi-mi:dtbp1_human(display_long)|uniprotkb:My031(orf name)|uniprotkb:DTNBP1(gene name)|psi-mi:DTNBP1(display_short)|uniprotkb:Dystrobrevin-binding protein 1(gene name synonym)|uniprotkb:Hermansky-Pudlak syndrome 7 protein(gene name synonym)|uniprotkb:Dysbindin-1(gene name synonym)|uniprotkb:BLOC1S8(gene name synonym)|uniprotkb:Biogenesis of lysosome-related organelles complex 1 subunit 8(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471338 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000047579(gene)|ensembl:ENST00000344537(transcript)|go:"GO:0001956"(positive regulation of neurotransmitter secretion)|go:"GO:0005634"(nucleus)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007596"(blood coagulation)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014059"(regulation of dopamine secretion)|go:"GO:0014069"(postsynaptic density)|go:"GO:0015630"(microtubule cytoskeleton)|go:"GO:0016528"(sarcoplasm)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0030496"(midbody)|go:"GO:0030672"(synaptic vesicle membrane)|go:"GO:0031083"(BLOC-1 complex)|go:"GO:0031175"(neuron projection development)|go:"GO:0031532"(actin cytoskeleton reorganization)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032438"(melanosome organization)|go:"GO:0033162"(melanosome membrane)|go:"GO:0042383"(sarcolemma)|go:"GO:0043005"(neuron projection)|go:"GO:0043197"(dendritic spine)|go:"GO:0005737"(cytoplasm)|go:"GO:0043506"(regulation of JUN kinase activity)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0048813"(dendrite morphogenesis)|go:"GO:0060155"(platelet dense granule organization)|go:"GO:0060159"(regulation of dopamine receptor signaling pathway)|go:"GO:0071901"(negative regulation of protein serine/threonine kinase activity)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098686"(hippocampal mossy fiber to CA3 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:1904115"(axon cytoplasm)|go:"GO:2000300"(regulation of synaptic vesicle exocytosis)|interpro:IPR007531(Dysbindin)|reactome:R-HSA-432722|go:"GO:0048490"(anterograde synaptic vesicle transport)|refseq:NP_115498.2|refseq:NP_898861.1|refseq:NP_001258597.1|refseq:NP_001258598.1|ensembl:ENST00000338950|ensembl:ENSP00000344718|ensembl:ENSP00000341680|refseq:NP_001258596.1|entrezgene/locuslink:84062(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438141(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PBwxp1vobm9l5yGoqev97lzkMHg9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:PFF6wCF50EPVQZxAGojaafO+lAs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VSY0 uniprotkb:A0A0S2Z3Y6 intact:EBI-743722|uniprotkb:Q9BYI2|uniprotkb:Q96LI0|uniprotkb:Q9BYI1|uniprotkb:Q9H225|ensembl:ENSP00000365550 intact:EBI-16435852 psi-mi:gkap1_human(display_long)|uniprotkb:GKAP42(gene name synonym)|uniprotkb:cGMP-dependent protein kinase-anchoring protein of 42 kDa(gene name synonym)|uniprotkb:FKSG21(orf name)|uniprotkb:GKAP1(gene name)|psi-mi:GKAP1(display_short) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471516 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165113(gene)|refseq:NP_001129425.1|refseq:NP_079487.2|refseq:XP_011517360.1|refseq:XP_005252298.1|ensembl:ENST00000376371(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007165"(signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046628"(positive regulation of insulin receptor signaling pathway)|interpro:IPR026109|dip:DIP-47324N|entrezgene/locuslink:80318(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438970(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WPAqDDTftv300tbwXkusTo6tmUo9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:Hr1GjDtiDD55g1ntJJTXFLKboDY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z3Z2 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16470607 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471497 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438516(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:qe5/7IhbXMNx7a7SBBoJcYMjIgk true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z442 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16435864 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471478 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438516(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:Q1CiV2ABAf0ewp332ott921uKmw true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z3Y6 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16435852 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471459 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438516(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:6FVyLEzkeikI8kbrexzbhQcam74 true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H000 uniprotkb:A0A0S2Z3Y6 intact:EBI-2341005|uniprotkb:A6NIA2|uniprotkb:Q9BUY2|uniprotkb:B3KRC5|uniprotkb:Q96BD4|uniprotkb:Q8N391|uniprotkb:Q9NRY1|uniprotkb:B4DPR4|intact:EBI-11126681|ensembl:ENSP00000170447|ensembl:ENSP00000502893 intact:EBI-16435852 psi-mi:mkrn2_human(display_long)|uniprotkb:MKRN2(gene name)|psi-mi:MKRN2(display_short)|uniprotkb:RNF62(gene name synonym)|uniprotkb:RING finger protein 62(gene name synonym)|uniprotkb:HSPC070(orf name)|uniprotkb:RING-type E3 ubiquitin transferase makorin-2(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471032 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_054879.3|refseq:NP_001258636.1|ensembl:ENSG00000075975(gene)|ensembl:ENST00000170447(transcript)|ensembl:ENST00000677816(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR026293|interpro:IPR036855|interpro:IPR041367|mint:Q9H000|entrezgene/locuslink:23609(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16432997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZI7Jr4Fd52sQnfeNXXcZ0NscyD89606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:37DBiLChfJ+UBRTYncymw4krzRw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15156-2 uniprotkb:A0A0S2Z442 intact:EBI-11522250|ensembl:ENSP00000406286 intact:EBI-16435864 psi-mi:o15156-2(display_long)|uniprotkb:ZBTB7B(gene name)|psi-mi:ZBTB7B(display_short)|uniprotkb:Krueppel-related zinc finger protein cKrox(gene name synonym)|uniprotkb:T-helper-inducing POZ/Krueppel-like factor(gene name synonym)|uniprotkb:ZBTB15(gene name synonym)|uniprotkb:ZFP67(gene name synonym)|uniprotkb:ZNF857B(gene name synonym)|uniprotkb:Zinc finger and BTB domain-containing protein 15(gene name synonym)|uniprotkb:Zinc finger protein 67 homolog(gene name synonym)|uniprotkb:Zinc finger protein 857B(gene name synonym)|uniprotkb:Zinc finger protein Th-POK(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471421 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740434(isoform-parent)|ensembl:ENSG00000160685(gene)|ensembl:ENST00000417934(transcript)|uniprotkb:O15156-2(isoform-parent)|entrezgene/locuslink:51043(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438334(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:41NEFYyprTXI+fOHVFh78TPKF289606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:pOaR2PPXAgKBIE16pFKKltITeZg true sufficient binding region:35-573 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15156-2 uniprotkb:A0A0S2Z3Y6 intact:EBI-11522250|ensembl:ENSP00000406286 intact:EBI-16435852 psi-mi:o15156-2(display_long)|uniprotkb:ZBTB7B(gene name)|psi-mi:ZBTB7B(display_short)|uniprotkb:Krueppel-related zinc finger protein cKrox(gene name synonym)|uniprotkb:T-helper-inducing POZ/Krueppel-like factor(gene name synonym)|uniprotkb:ZBTB15(gene name synonym)|uniprotkb:ZFP67(gene name synonym)|uniprotkb:ZNF857B(gene name synonym)|uniprotkb:Zinc finger and BTB domain-containing protein 15(gene name synonym)|uniprotkb:Zinc finger protein 67 homolog(gene name synonym)|uniprotkb:Zinc finger protein 857B(gene name synonym)|uniprotkb:Zinc finger protein Th-POK(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471402 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740434(isoform-parent)|ensembl:ENSG00000160685(gene)|ensembl:ENST00000417934(transcript)|uniprotkb:O15156-2(isoform-parent)|entrezgene/locuslink:51043(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438334(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:41NEFYyprTXI+fOHVFh78TPKF289606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:bHrUnHclUs5jhzhQ69Vtxpb1qtM true sufficient binding region:35-573 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJW9 uniprotkb:A0A0S2Z442 intact:EBI-748621|uniprotkb:Q96CQ2|uniprotkb:B3KQB3|ensembl:ENSP00000325414|ensembl:ENSP00000375882 intact:EBI-16435864 psi-mi:srtd3_human(display_long)|uniprotkb:Replication protein-binding trans-activator(gene name synonym)|uniprotkb:SERTAD3(gene name)|psi-mi:SERTAD3(display_short)|uniprotkb:RBT1(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471386 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_006723242.1|refseq:NP_037500.2|refseq:NP_976219.1|refseq:XP_005258889.1|ensembl:ENSG00000167565(gene)|ensembl:ENST00000322354(transcript)|ensembl:ENST00000392028(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|interpro:IPR009263(SERTA)|interpro:IPR039585|entrezgene/locuslink:29946(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438151(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zraVKcqHA7SNRrMV50iyPK6O7ok9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:VxSXjE4wMZN5XOh9B8/nNncbFAA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJW9 uniprotkb:A0A0S2Z3Y6 intact:EBI-748621|uniprotkb:Q96CQ2|uniprotkb:B3KQB3|ensembl:ENSP00000325414|ensembl:ENSP00000375882 intact:EBI-16435852 psi-mi:srtd3_human(display_long)|uniprotkb:Replication protein-binding trans-activator(gene name synonym)|uniprotkb:SERTAD3(gene name)|psi-mi:SERTAD3(display_short)|uniprotkb:RBT1(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471370 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_006723242.1|refseq:NP_037500.2|refseq:NP_976219.1|refseq:XP_005258889.1|ensembl:ENSG00000167565(gene)|ensembl:ENST00000322354(transcript)|ensembl:ENST00000392028(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|interpro:IPR009263(SERTA)|interpro:IPR039585|entrezgene/locuslink:29946(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438151(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zraVKcqHA7SNRrMV50iyPK6O7ok9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:RJ3Z27h+TApsYKOxHcrcRDijYX8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJW9 uniprotkb:Q99608 intact:EBI-748621|uniprotkb:Q96CQ2|uniprotkb:B3KQB3|ensembl:ENSP00000325414|ensembl:ENSP00000375882 intact:EBI-718177|uniprotkb:B2R6Z5|ensembl:ENSP00000497916 psi-mi:srtd3_human(display_long)|uniprotkb:Replication protein-binding trans-activator(gene name synonym)|uniprotkb:SERTAD3(gene name)|psi-mi:SERTAD3(display_short)|uniprotkb:RBT1(gene name synonym) psi-mi:necd_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471354 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_006723242.1|refseq:NP_037500.2|refseq:NP_976219.1|refseq:XP_005258889.1|ensembl:ENSG00000167565(gene)|ensembl:ENST00000322354(transcript)|ensembl:ENST00000392028(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|interpro:IPR009263(SERTA)|interpro:IPR039585|entrezgene/locuslink:29946(identity) refseq:NP_002478.1|ensembl:ENSG00000182636(gene)|ensembl:ENST00000649030(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001764"(neuron migration)|go:"GO:0003016"(respiratory system process)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0007413"(axonal fasciculation)|go:"GO:0007417"(central nervous system development)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009791"(post-embryonic development)|go:"GO:0019233"(sensory perception of pain)|go:"GO:0032991"(protein-containing complex)|go:"GO:0040008"(regulation of growth)|go:"GO:0042995"(cell projection)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0043204"(perikaryon)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0048011"(neurotrophin TRK receptor signaling pathway)|go:"GO:0048675"(axon extension)|go:"GO:0048871"(multicellular organismal homeostasis)|go:"GO:0071514"(genomic imprinting)|go:"GO:0090312"(positive regulation of protein deacetylation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|reactome:R-HSA-6785807|go:"GO:0008347"(glial cell migration)|entrezgene/locuslink:4692(identity) intact:EBI-16438151(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zraVKcqHA7SNRrMV50iyPK6O7ok9606 rogid:8hFkLGNpSu6jmbrqmJuxNBZoWTs9606 rigid:e8Y5pNDzRW8thoBokvAfadbTYIs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VSY0 uniprotkb:A0A0S2Z442 intact:EBI-743722|uniprotkb:Q9BYI2|uniprotkb:Q96LI0|uniprotkb:Q9BYI1|uniprotkb:Q9H225|ensembl:ENSP00000365550 intact:EBI-16435864 psi-mi:gkap1_human(display_long)|uniprotkb:GKAP42(gene name synonym)|uniprotkb:cGMP-dependent protein kinase-anchoring protein of 42 kDa(gene name synonym)|uniprotkb:FKSG21(orf name)|uniprotkb:GKAP1(gene name)|psi-mi:GKAP1(display_short) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471532 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165113(gene)|refseq:NP_001129425.1|refseq:NP_079487.2|refseq:XP_011517360.1|refseq:XP_005252298.1|ensembl:ENST00000376371(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007165"(signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046628"(positive regulation of insulin receptor signaling pathway)|interpro:IPR026109|dip:DIP-47324N|entrezgene/locuslink:80318(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438970(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WPAqDDTftv300tbwXkusTo6tmUo9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:7Yicyok3J9X9AqzSVhv7EWfSVtE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BQQ3 uniprotkb:I6L9F6 intact:EBI-2561458|uniprotkb:Q3SYG7|uniprotkb:Q96H42|uniprotkb:Q8N272|uniprotkb:B3KWC8|ensembl:ENSP00000313869 intact:EBI-10178578|intact:EBI-21999896 psi-mi:gors1_human(display_long)|uniprotkb:GORASP1(gene name)|psi-mi:GORASP1(display_short)|uniprotkb:GOLPH5(gene name synonym)|uniprotkb:GRASP65(gene name synonym)|uniprotkb:Golgi reassembly-stacking protein of 65 kDa(gene name synonym)|uniprotkb:Golgi peripheral membrane protein p65(gene name synonym)|uniprotkb:Golgi phosphoprotein 5(gene name synonym) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471845 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_114105.1|refseq:NP_001265718.1|refseq:NP_001265719.1|ensembl:ENSG00000114745(gene)|ensembl:ENST00000319283(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006487"(protein N-linked glycosylation)|go:"GO:0007030"(Golgi organization)|go:"GO:0015031"(protein transport)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0050774"(negative regulation of dendrite morphogenesis)|go:"GO:0061951"(establishment of protein localization to plasma membrane)|interpro:IPR007583(GRASP55/65)|interpro:IPR024958|interpro:IPR036034|rcsb pdb:4REY|rcsb pdb:6G8T|rcsb pdb:6G8W|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|entrezgene/locuslink:64689(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16431564(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gCTXn0H+UPamtVxyvChrMrcQvCA9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:DhJtcihLIRS5IOBuY2fwRZB7o/I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96AQ9 uniprotkb:A0A0S2Z3Y6 intact:EBI-741921|ensembl:ENSP00000364814|uniprotkb:Q5T5Q5|uniprotkb:Q8N3X3|uniprotkb:Q8N9P9 intact:EBI-16435852 psi-mi:f131c_human(display_long)|uniprotkb:FAM131C(gene name)|psi-mi:FAM131C(display_short)|uniprotkb:C1orf117(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471564 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000185519(gene)|ensembl:ENST00000375662(transcript)|interpro:IPR026782|refseq:NP_872429.2|entrezgene/locuslink:348487(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16439018(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:C85G7ipvJKdcueTSbK+r4W2cboM9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:L63AWUaZ3D8IxO+R2hYNjYxLQUA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96AQ9 uniprotkb:A0A0S2Z442 intact:EBI-741921|ensembl:ENSP00000364814|uniprotkb:Q5T5Q5|uniprotkb:Q8N3X3|uniprotkb:Q8N9P9 intact:EBI-16435864 psi-mi:f131c_human(display_long)|uniprotkb:FAM131C(gene name)|psi-mi:FAM131C(display_short)|uniprotkb:C1orf117(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471580 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000185519(gene)|ensembl:ENST00000375662(transcript)|interpro:IPR026782|refseq:NP_872429.2|entrezgene/locuslink:348487(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16439018(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:C85G7ipvJKdcueTSbK+r4W2cboM9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:ps/0XkdLC04mDDNvhYbsHi/3ZjQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96AQ9 uniprotkb:A0A0S2Z3Z2 intact:EBI-741921|ensembl:ENSP00000364814|uniprotkb:Q5T5Q5|uniprotkb:Q8N3X3|uniprotkb:Q8N9P9 intact:EBI-16470607 psi-mi:f131c_human(display_long)|uniprotkb:FAM131C(gene name)|psi-mi:FAM131C(display_short)|uniprotkb:C1orf117(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471596 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000185519(gene)|ensembl:ENST00000375662(transcript)|interpro:IPR026782|refseq:NP_872429.2|entrezgene/locuslink:348487(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16439018(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:C85G7ipvJKdcueTSbK+r4W2cboM9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:7+rowNxaDGFRYy/hGzu2lIbCb+g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N344 uniprotkb:A0A0S2Z3Y6 intact:EBI-3504938|uniprotkb:Q9ULM7|intact:EBI-28983418|ensembl:ENSP00000264819 intact:EBI-16435852 psi-mi:mier2_human(display_long)|uniprotkb:MIER2(gene name)|psi-mi:MIER2(display_short)|uniprotkb:KIAA1193(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471612 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060020.1|ensembl:ENSP00000264819|ensembl:ENSG00000105556(gene)|ensembl:ENST00000264819(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0016575"(histone deacetylation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR000949(ELM2)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR040138|entrezgene/locuslink:54531(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440460(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:hedPKzh11QzR2oqkwIv/Frvg5Yc9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:7z+v8/JSsMFCR4gWeQxZQJbVD6I true sufficient binding region:37-545 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N344 uniprotkb:A0A0S2Z442 intact:EBI-3504938|uniprotkb:Q9ULM7|intact:EBI-28983418|ensembl:ENSP00000264819 intact:EBI-16435864 psi-mi:mier2_human(display_long)|uniprotkb:MIER2(gene name)|psi-mi:MIER2(display_short)|uniprotkb:KIAA1193(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471631 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060020.1|ensembl:ENSP00000264819|ensembl:ENSG00000105556(gene)|ensembl:ENST00000264819(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0016575"(histone deacetylation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR000949(ELM2)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR040138|entrezgene/locuslink:54531(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440460(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:hedPKzh11QzR2oqkwIv/Frvg5Yc9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:cXAj0FINYnsqmRG96OYLX6wuXKo true sufficient binding region:37-545 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N344 uniprotkb:A0A0S2Z3Z2 intact:EBI-3504938|uniprotkb:Q9ULM7|intact:EBI-28983418|ensembl:ENSP00000264819 intact:EBI-16470607 psi-mi:mier2_human(display_long)|uniprotkb:MIER2(gene name)|psi-mi:MIER2(display_short)|uniprotkb:KIAA1193(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471650 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060020.1|ensembl:ENSP00000264819|ensembl:ENSG00000105556(gene)|ensembl:ENST00000264819(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0016575"(histone deacetylation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR000949(ELM2)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR040138|entrezgene/locuslink:54531(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440460(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:hedPKzh11QzR2oqkwIv/Frvg5Yc9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:xfXGKJ58Y01Q83U9AwsLKHeShv4 true sufficient binding region:37-545 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P51116 uniprotkb:A0A0S2Z3Y6 intact:EBI-740459|uniprotkb:Q8WUM2|uniprotkb:Q86V09|uniprotkb:B2R9M2|uniprotkb:D3DTQ1|ensembl:ENSP00000250113 intact:EBI-16435852 psi-mi:fxr2_human(display_long)|uniprotkb:FXR2(gene name)|psi-mi:FXR2(display_short)|uniprotkb:FMR1L2(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471669 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR004087(K Homology)|refseq:NP_004851.2|ensembl:ENSG00000129245(gene)|ensembl:ENST00000250113(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003723"(RNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016020"(membrane)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0044326"(dendritic spine neck)|go:"GO:0045182"(translation regulator activity)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0098793"(presynapse)|go:"GO:1902737"(dendritic filopodium)|go:"GO:2001022"(positive regulation of response to DNA damage stimulus)|interpro:IPR004088(K Homology, type 1)|interpro:IPR008395(Agenet)|interpro:IPR022034|interpro:IPR032172|interpro:IPR036612|interpro:IPR040148|interpro:IPR040472|interpro:IPR041560|mint:P51116|rcsb pdb:3H8Z|entrezgene/locuslink:9513(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440932(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:NnYgyzD2NRGIO1ZHukr5qy44qRE9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:k+VUn7DWy+h7HoOB2ikhqBSsq4Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P51116 uniprotkb:A0A0S2Z442 intact:EBI-740459|uniprotkb:Q8WUM2|uniprotkb:Q86V09|uniprotkb:B2R9M2|uniprotkb:D3DTQ1|ensembl:ENSP00000250113 intact:EBI-16435864 psi-mi:fxr2_human(display_long)|uniprotkb:FXR2(gene name)|psi-mi:FXR2(display_short)|uniprotkb:FMR1L2(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471685 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR004087(K Homology)|refseq:NP_004851.2|ensembl:ENSG00000129245(gene)|ensembl:ENST00000250113(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003723"(RNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016020"(membrane)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0044326"(dendritic spine neck)|go:"GO:0045182"(translation regulator activity)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0098793"(presynapse)|go:"GO:1902737"(dendritic filopodium)|go:"GO:2001022"(positive regulation of response to DNA damage stimulus)|interpro:IPR004088(K Homology, type 1)|interpro:IPR008395(Agenet)|interpro:IPR022034|interpro:IPR032172|interpro:IPR036612|interpro:IPR040148|interpro:IPR040472|interpro:IPR041560|mint:P51116|rcsb pdb:3H8Z|entrezgene/locuslink:9513(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440932(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:NnYgyzD2NRGIO1ZHukr5qy44qRE9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:hxoe3gEUnTjYpC3OZX/0lg6JhoY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P51116 uniprotkb:A0A0S2Z3Z2 intact:EBI-740459|uniprotkb:Q8WUM2|uniprotkb:Q86V09|uniprotkb:B2R9M2|uniprotkb:D3DTQ1|ensembl:ENSP00000250113 intact:EBI-16470607 psi-mi:fxr2_human(display_long)|uniprotkb:FXR2(gene name)|psi-mi:FXR2(display_short)|uniprotkb:FMR1L2(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471701 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR004087(K Homology)|refseq:NP_004851.2|ensembl:ENSG00000129245(gene)|ensembl:ENST00000250113(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0003723"(RNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005844"(polysome)|go:"GO:0014069"(postsynaptic density)|go:"GO:0016020"(membrane)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030424"(axon)|go:"GO:0030426"(growth cone)|go:"GO:0036464"(cytoplasmic ribonucleoprotein granule)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0044326"(dendritic spine neck)|go:"GO:0045182"(translation regulator activity)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051489"(regulation of filopodium assembly)|go:"GO:0098793"(presynapse)|go:"GO:1902737"(dendritic filopodium)|go:"GO:2001022"(positive regulation of response to DNA damage stimulus)|interpro:IPR004088(K Homology, type 1)|interpro:IPR008395(Agenet)|interpro:IPR022034|interpro:IPR032172|interpro:IPR036612|interpro:IPR040148|interpro:IPR040472|interpro:IPR041560|mint:P51116|rcsb pdb:3H8Z|entrezgene/locuslink:9513(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440932(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:NnYgyzD2NRGIO1ZHukr5qy44qRE9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:sC7wJQRTHctX69GRJRcDOYPPOTs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z5R6-2 uniprotkb:A0A0S2Z3Y6 intact:EBI-12059807|ensembl:ENSP00000349237 intact:EBI-16435852 psi-mi:q7z5r6-2(display_long)|uniprotkb:APBB1IP(gene name)|psi-mi:APBB1IP(display_short)|uniprotkb:APBB1-interacting protein 1(gene name synonym)|uniprotkb:PREL1(gene name synonym)|uniprotkb:Proline-rich EVH1 ligand 1(gene name synonym)|uniprotkb:Proline-rich protein 73(gene name synonym)|uniprotkb:RARP1(gene name synonym)|uniprotkb:RIAM(gene name synonym)|uniprotkb:Rap1-GTP-interacting adapter molecule(gene name synonym)|uniprotkb:Retinoic acid-responsive proline-rich protein 1(gene name synonym) psi-mi:a0a0s2z3y6_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471717 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000077420(gene)|ensembl:ENST00000356785(transcript)|intact:EBI-2818084(isoform-parent)|uniprotkb:Q7Z5R6-2(isoform-parent)|entrezgene/locuslink:54518(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440942(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yY1eNRBlY6dtad7mPNj7QYlnAqY9606 rogid:eaey9dmevR+Hh3wFZFVagdsh+WU9606 rigid:qdJM4ej6WvLabEGLiLf5aKPQyWk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z5R6-2 uniprotkb:A0A0S2Z442 intact:EBI-12059807|ensembl:ENSP00000349237 intact:EBI-16435864 psi-mi:q7z5r6-2(display_long)|uniprotkb:APBB1IP(gene name)|psi-mi:APBB1IP(display_short)|uniprotkb:APBB1-interacting protein 1(gene name synonym)|uniprotkb:PREL1(gene name synonym)|uniprotkb:Proline-rich EVH1 ligand 1(gene name synonym)|uniprotkb:Proline-rich protein 73(gene name synonym)|uniprotkb:RARP1(gene name synonym)|uniprotkb:RIAM(gene name synonym)|uniprotkb:Rap1-GTP-interacting adapter molecule(gene name synonym)|uniprotkb:Retinoic acid-responsive proline-rich protein 1(gene name synonym) psi-mi:a0a0s2z442_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471733 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000077420(gene)|ensembl:ENST00000356785(transcript)|intact:EBI-2818084(isoform-parent)|uniprotkb:Q7Z5R6-2(isoform-parent)|entrezgene/locuslink:54518(identity) go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440942(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yY1eNRBlY6dtad7mPNj7QYlnAqY9606 rogid:DmTa/VoRh5gsCh1JN8IsJUP5+Qk9606 rigid:+HCzlLeEAOP8NlDPcUGkpjhnz7s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z5R6-2 uniprotkb:A0A0S2Z3Z2 intact:EBI-12059807|ensembl:ENSP00000349237 intact:EBI-16470607 psi-mi:q7z5r6-2(display_long)|uniprotkb:APBB1IP(gene name)|psi-mi:APBB1IP(display_short)|uniprotkb:APBB1-interacting protein 1(gene name synonym)|uniprotkb:PREL1(gene name synonym)|uniprotkb:Proline-rich EVH1 ligand 1(gene name synonym)|uniprotkb:Proline-rich protein 73(gene name synonym)|uniprotkb:RARP1(gene name synonym)|uniprotkb:RIAM(gene name synonym)|uniprotkb:Rap1-GTP-interacting adapter molecule(gene name synonym)|uniprotkb:Retinoic acid-responsive proline-rich protein 1(gene name synonym) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471749 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000077420(gene)|ensembl:ENST00000356785(transcript)|intact:EBI-2818084(isoform-parent)|uniprotkb:Q7Z5R6-2(isoform-parent)|entrezgene/locuslink:54518(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16440942(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yY1eNRBlY6dtad7mPNj7QYlnAqY9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:gbyyLawO06xWFds+nmZeHgI552g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96HR9-2 uniprotkb:Q9ULP0 intact:EBI-14065960|ensembl:ENSP00000233596 intact:EBI-10323810|uniprotkb:Q96PL9|uniprotkb:Q9GZX0|uniprotkb:H7C600|uniprotkb:B3KNU2|uniprotkb:Q6ZNE7|uniprotkb:Q9GZN3|uniprotkb:Q9GZM1|uniprotkb:Q6ZTI7|uniprotkb:B4DK66|uniprotkb:B4DSW5|ensembl:ENSP00000457659 psi-mi:q96hr9-2(display_long)|uniprotkb:REEP6(gene name)|psi-mi:REEP6(display_short)|uniprotkb:C19orf32(gene name synonym)|uniprotkb:DP1L1(gene name synonym)|uniprotkb:Polyposis locus protein 1-like 1(gene name synonym) psi-mi:ndrg4_human(display_long)|uniprotkb:NDRG4(gene name)|psi-mi:NDRG4(display_short)|uniprotkb:BDM1(gene name synonym)|uniprotkb:Brain development-related molecule 1(gene name synonym)|uniprotkb:KIAA1180(gene name synonym)|uniprotkb:N-myc downstream-regulated gene 4 protein(gene name synonym)|uniprotkb:Vascular smooth muscle cell-associated protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471765 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96HR9-2(isoform-parent)|intact:EBI-750345(isoform-parent)|ensembl:ENSG00000115255(gene)|ensembl:ENST00000233596(transcript)|entrezgene/locuslink:92840(identity) refseq:NP_001123959.1|refseq:NP_001229762.1|refseq:NP_001229763.1|refseq:NP_001229764.1|refseq:NP_001229765.1|refseq:NP_065198.1|refseq:NP_075061.1|ensembl:ENSG00000103034(gene)|ensembl:ENST00000570248(transcript)|go:"GO:0001947"(heart looping)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0007420"(brain development)|go:"GO:0008542"(visual learning)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0031253"(cell projection membrane)|go:"GO:0035050"(embryonic heart tube development)|go:"GO:0048278"(vesicle docking)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0060038"(cardiac muscle cell proliferation)|go:"GO:0060973"(cell migration involved in heart development)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR004142(Ndr)|interpro:IPR029058|interpro:IPR030695|mint:Q9ULP0|refseq:XP_016879079.1|entrezgene/locuslink:65009(identity) intact:EBI-16433207(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YbC7anRtL9P0N9fSlSCGcFjb6yk9606 rogid:66xDAShV6u8TldB/nbR5ru0h7A49606 rigid:3Srcpa/KoPZf1X73TBB7G128U9I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95197-3 uniprotkb:Q9ULP0 intact:EBI-11525735|ensembl:ENSP00000440874 intact:EBI-10323810|uniprotkb:Q96PL9|uniprotkb:Q9GZX0|uniprotkb:H7C600|uniprotkb:B3KNU2|uniprotkb:Q6ZNE7|uniprotkb:Q9GZN3|uniprotkb:Q9GZM1|uniprotkb:Q6ZTI7|uniprotkb:B4DK66|uniprotkb:B4DSW5|ensembl:ENSP00000457659 psi-mi:o95197-3(display_long)|uniprotkb:RTN3(gene name)|psi-mi:RTN3(display_short)|uniprotkb:ASYIP(gene name synonym)|uniprotkb:Homolog of ASY protein(gene name synonym)|uniprotkb:NSPL2(gene name synonym)|uniprotkb:Neuroendocrine-specific protein-like 2(gene name synonym)|uniprotkb:Neuroendocrine-specific protein-like II(gene name synonym)|uniprotkb:A1(isoform synonym)|uniprotkb:B1(isoform synonym) psi-mi:ndrg4_human(display_long)|uniprotkb:NDRG4(gene name)|psi-mi:NDRG4(display_short)|uniprotkb:BDM1(gene name synonym)|uniprotkb:Brain development-related molecule 1(gene name synonym)|uniprotkb:KIAA1180(gene name synonym)|uniprotkb:N-myc downstream-regulated gene 4 protein(gene name synonym)|uniprotkb:Vascular smooth muscle cell-associated protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471781 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000133318(gene)|ensembl:ENST00000537981(transcript)|intact:EBI-740467(isoform-parent)|uniprotkb:O95197-3(isoform-parent)|entrezgene/locuslink:10313(identity) refseq:NP_001123959.1|refseq:NP_001229762.1|refseq:NP_001229763.1|refseq:NP_001229764.1|refseq:NP_001229765.1|refseq:NP_065198.1|refseq:NP_075061.1|ensembl:ENSG00000103034(gene)|ensembl:ENST00000570248(transcript)|go:"GO:0001947"(heart looping)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0007420"(brain development)|go:"GO:0008542"(visual learning)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0031253"(cell projection membrane)|go:"GO:0035050"(embryonic heart tube development)|go:"GO:0048278"(vesicle docking)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0060038"(cardiac muscle cell proliferation)|go:"GO:0060973"(cell migration involved in heart development)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR004142(Ndr)|interpro:IPR029058|interpro:IPR030695|mint:Q9ULP0|refseq:XP_016879079.1|entrezgene/locuslink:65009(identity) intact:EBI-16434190(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TJnANu85CM52dRZ6s+hYMlUABE9606 rogid:66xDAShV6u8TldB/nbR5ru0h7A49606 rigid:PQvYRWtCv7LBKSjuANpFJemZWaQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96DZ9-2 uniprotkb:Q9ULP0 intact:EBI-11522780|ensembl:ENSP00000352270|ensembl:ENSP00000497215 intact:EBI-10323810|uniprotkb:Q96PL9|uniprotkb:Q9GZX0|uniprotkb:H7C600|uniprotkb:B3KNU2|uniprotkb:Q6ZNE7|uniprotkb:Q9GZN3|uniprotkb:Q9GZM1|uniprotkb:Q6ZTI7|uniprotkb:B4DK66|uniprotkb:B4DSW5|ensembl:ENSP00000457659 psi-mi:q96dz9-2(display_long)|uniprotkb:CMTM5(gene name)|psi-mi:CMTM5(display_short)|uniprotkb:CKLFSF5(gene name synonym)|uniprotkb:Chemokine-like factor superfamily member 5(gene name synonym) psi-mi:ndrg4_human(display_long)|uniprotkb:NDRG4(gene name)|psi-mi:NDRG4(display_short)|uniprotkb:BDM1(gene name synonym)|uniprotkb:Brain development-related molecule 1(gene name synonym)|uniprotkb:KIAA1180(gene name synonym)|uniprotkb:N-myc downstream-regulated gene 4 protein(gene name synonym)|uniprotkb:Vascular smooth muscle cell-associated protein 8(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471797 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166091(gene)|ensembl:ENST00000359320(transcript)|ensembl:ENST00000649278(transcript)|intact:EBI-2548702(isoform-parent)|uniprotkb:Q96DZ9-2(isoform-parent)|entrezgene/locuslink:116173(identity) refseq:NP_001123959.1|refseq:NP_001229762.1|refseq:NP_001229763.1|refseq:NP_001229764.1|refseq:NP_001229765.1|refseq:NP_065198.1|refseq:NP_075061.1|ensembl:ENSG00000103034(gene)|ensembl:ENST00000570248(transcript)|go:"GO:0001947"(heart looping)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0007165"(signal transduction)|go:"GO:0007420"(brain development)|go:"GO:0008542"(visual learning)|go:"GO:0010642"(negative regulation of platelet-derived growth factor receptor signaling pathway)|go:"GO:0010976"(positive regulation of neuron projection development)|go:"GO:0014912"(negative regulation of smooth muscle cell migration)|go:"GO:0016323"(basolateral plasma membrane)|go:"GO:0030154"(cell differentiation)|go:"GO:0031253"(cell projection membrane)|go:"GO:0035050"(embryonic heart tube development)|go:"GO:0048278"(vesicle docking)|go:"GO:0048662"(negative regulation of smooth muscle cell proliferation)|go:"GO:0060038"(cardiac muscle cell proliferation)|go:"GO:0060973"(cell migration involved in heart development)|go:"GO:0070374"(positive regulation of ERK1 and ERK2 cascade)|go:"GO:2001135"(regulation of endocytic recycling)|interpro:IPR004142(Ndr)|interpro:IPR029058|interpro:IPR030695|mint:Q9ULP0|refseq:XP_016879079.1|entrezgene/locuslink:65009(identity) intact:EBI-16440024(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2TJ7rZKQNb5hH5gz9i+ujOEOIOg9606 rogid:66xDAShV6u8TldB/nbR5ru0h7A49606 rigid:Whl1LFBMHS1e0hKwYCPAPHFExlo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P12757 uniprotkb:I6L9F6 intact:EBI-2902468|uniprotkb:A6NGT1|uniprotkb:O00464|uniprotkb:P12756|uniprotkb:Q07501|uniprotkb:B4DT50|ensembl:ENSP00000259119|ensembl:ENSP00000415243 intact:EBI-10178578|intact:EBI-21999896 psi-mi:skil_human(display_long)|uniprotkb:SKIL(gene name)|psi-mi:SKIL(display_short)|uniprotkb:SNO(gene name synonym)|uniprotkb:Ski-related protein(gene name synonym)|uniprotkb:Ski-related oncogene(gene name synonym) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471813 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001138569.1|refseq:NP_001138570.1|refseq:NP_005405.2|refseq:NP_001234937.1|refseq:XP_005247778.1|ensembl:ENSG00000136603(gene)|ensembl:ENST00000259119(transcript)|ensembl:ENST00000458537(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001825"(blastocyst formation)|go:"GO:0002260"(lymphocyte homeostasis)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0016605"(PML body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030514"(negative regulation of BMP signaling pathway)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034097"(response to cytokine)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045596"(negative regulation of cell differentiation)|go:"GO:0046332"(SMAD binding)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070306"(lens fiber cell differentiation)|go:"GO:0070848"(response to growth factor)|go:"GO:1902043"(positive regulation of extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:1902231"(positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage)|interpro:IPR003380(Transforming protein Ski)|interpro:IPR009061(Putative DNA binding)|interpro:IPR010919(SAND-like)|interpro:IPR014890(c-SKI Smad4 binding)|interpro:IPR023216|interpro:IPR028373|interpro:IPR037000|rcsb pdb:3EQ5|rcsb pdb:5C4V|reactome:R-HSA-2173795|refseq:XP_006713798.1|dip:DIP-42138N|entrezgene/locuslink:6498(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16429652(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CktHHQJKOG+DaY5zwy1U+2YeTmw9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:60YrFHcyh/IuhDlXROG86Rww+ZI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P17661 uniprotkb:I6L9F6 intact:EBI-1055572|uniprotkb:Q15787|uniprotkb:Q8IZR1|uniprotkb:Q8IZR6|uniprotkb:Q8NES2|uniprotkb:Q8NEU6|uniprotkb:Q8TAC4|uniprotkb:Q8TCX2|uniprotkb:Q8TD99|uniprotkb:Q9UHN5|uniprotkb:Q9UJ80|uniprotkb:Q549R7|uniprotkb:Q549R8|uniprotkb:Q549R9|ensembl:ENSP00000363071 intact:EBI-10178578|intact:EBI-21999896 psi-mi:desm_human(display_long)|uniprotkb:DES(gene name)|psi-mi:DES(display_short) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471829 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001918.3|ensembl:ENSG00000175084(gene)|ensembl:ENST00000373960(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005916"(fascia adherens)|go:"GO:0006936"(muscle contraction)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0008016"(regulation of heart contraction)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0014704"(intercalated disc)|go:"GO:0030018"(Z disc)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0042383"(sarcolemma)|go:"GO:0042802"(identical protein binding)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0005882"(intermediate filament)|go:"GO:0070062"(extracellular exosome)|go:"GO:0097512"(cardiac myofibril)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR039008|mint:P17661|reactome:R-HSA-390522|entrezgene/locuslink:1674(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16430919(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:htjPzLKLLbRXxfKz9NUgMYMuIaY9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:U3N9F/Nm/jKEf3xoRz7ivTa+OA4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VSY0 uniprotkb:A0A0S2Z3Z2 intact:EBI-743722|uniprotkb:Q9BYI2|uniprotkb:Q96LI0|uniprotkb:Q9BYI1|uniprotkb:Q9H225|ensembl:ENSP00000365550 intact:EBI-16470607 psi-mi:gkap1_human(display_long)|uniprotkb:GKAP42(gene name synonym)|uniprotkb:cGMP-dependent protein kinase-anchoring protein of 42 kDa(gene name synonym)|uniprotkb:FKSG21(orf name)|uniprotkb:GKAP1(gene name)|psi-mi:GKAP1(display_short) psi-mi:a0a0s2z3z2_human(display_long)|uniprotkb:NDN(gene name)|psi-mi:NDN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471548 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165113(gene)|refseq:NP_001129425.1|refseq:NP_079487.2|refseq:XP_011517360.1|refseq:XP_005252298.1|ensembl:ENST00000376371(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007165"(signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046628"(positive regulation of insulin receptor signaling pathway)|interpro:IPR026109|dip:DIP-47324N|entrezgene/locuslink:80318(identity) interpro:IPR041899|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0048666"(neuron development)|interpro:IPR002190(MAGE protein)|interpro:IPR030086|interpro:IPR037445|entrezgene/locuslink:4692(identity) intact:EBI-16438970(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WPAqDDTftv300tbwXkusTo6tmUo9606 rogid:tdC5Yz4OKJZ+hnYBognHHMlFpzo9606 rigid:FM0lsi06TLZ9lpAj6yZ0mnKyB14 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P63098 uniprotkb:Q08209 intact:EBI-915984|uniprotkb:B5MDU4|uniprotkb:P06705|uniprotkb:P15117|uniprotkb:Q08044|uniprotkb:Q53SL0|uniprotkb:B2RC10|ensembl:ENSP00000234310 intact:EBI-352922|uniprotkb:Q8TAW9|uniprotkb:A8K3B7|uniprotkb:B5BUA2|uniprotkb:A1A441|uniprotkb:A8W6Z7|ensembl:ENSP00000378323|uniprotkb:A8W6Z8 psi-mi:canb1_human(display_long)|uniprotkb:PPP3R1(gene name)|psi-mi:PPP3R1(display_short)|uniprotkb:CNA2(gene name synonym)|uniprotkb:CNB(gene name synonym)|uniprotkb:Protein phosphatase 2B regulatory subunit 1(gene name synonym)|uniprotkb:Protein phosphatase 3 regulatory subunit B alpha isoform 1(gene name synonym) psi-mi:pp2ba_human(display_long)|uniprotkb:PPP3CA(gene name)|psi-mi:PPP3CA(display_short)|uniprotkb:CALNA(gene name synonym)|uniprotkb:CNA(gene name synonym)|uniprotkb:Calmodulin-dependent calcineurin A subunit alpha isoform(gene name synonym)|uniprotkb:CAM-PRP catalytic subunit(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472290 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000936.1|dip:DIP-6096N|ensembl:ENSG00000221823(gene)|ensembl:ENST00000234310(transcript)|go:"GO:0001569"(branching involved in blood vessel morphogenesis)|go:"GO:0001837"(epithelial to mesenchymal transition)|go:"GO:0004723"(calcium-dependent protein serine/threonine phosphatase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005955"(calcineurin complex)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0007507"(heart development)|go:"GO:0008597"(calcium-dependent protein serine/threonine phosphatase regulator activity)|go:"GO:0016018"(cyclosporin A binding)|go:"GO:0019902"(phosphatase binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0022011"(myelination in peripheral nervous system)|go:"GO:0033173"(calcineurin-NFAT signaling cascade)|go:"GO:0042383"(sarcolemma)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060487"(lung epithelial cell differentiation)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098688"(parallel fiber to Purkinje cell synapse)|go:"GO:0098794"(postsynapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099149"(regulation of postsynaptic neurotransmitter receptor internalization)|go:"GO:0099170"(postsynaptic modulation of chemical synaptic transmission)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR015757(Calcineurin B protein)|interpro:IPR018247|mint:P63098|rcsb pdb:1AUI|rcsb pdb:1M63|rcsb pdb:1MF8|rcsb pdb:2P6B|rcsb pdb:3LL8|rcsb pdb:4F0Z|rcsb pdb:4OR9|rcsb pdb:4ORA|rcsb pdb:4ORC|rcsb pdb:5SVE|rcsb pdb:6NUC|rcsb pdb:6NUF|rcsb pdb:6NUU|reactome:R-HSA-111447|reactome:R-HSA-180024|reactome:R-HSA-2025928|reactome:R-HSA-2871809|reactome:R-HSA-4086398|reactome:R-HSA-5607763|entrezgene/locuslink:5534(identity) go:"GO:1905205"(positive regulation of connective tissue replacement)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR041751|interpro:IPR043360|mint:Q08209|rcsb pdb:1AUI|rcsb pdb:1M63|rcsb pdb:1MF8|rcsb pdb:2JOG|rcsb pdb:2JZI|rcsb pdb:2P6B|rcsb pdb:2R28|rcsb pdb:2W73|rcsb pdb:3LL8|rcsb pdb:4F0Z|rcsb pdb:4Q5U|rcsb pdb:5C1V|rcsb pdb:5SVE|rcsb pdb:6NUC|rcsb pdb:6NUF|rcsb pdb:6NUU|rcsb pdb:6UUQ|reactome:R-HSA-180024|reactome:R-HSA-2871809|reactome:R-HSA-4086398|reactome:R-HSA-5607763|reactome:R-HSA-2025928|refseq:NP_000935.1|refseq:NP_001124163.1|refseq:NP_001124164.1|go:"GO:0043197"(dendritic spine)|go:"GO:0043403"(skeletal muscle tissue regeneration)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045785"(positive regulation of cell adhesion)|go:"GO:0045807"(positive regulation of endocytosis)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046676"(negative regulation of insulin secretion)|go:"GO:0046983"(protein dimerization activity)|go:"GO:0048741"(skeletal muscle fiber development)|go:"GO:0050774"(negative regulation of dendrite morphogenesis)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051117"(ATPase binding)|go:"GO:0051592"(response to calcium ion)|go:"GO:0060079"(excitatory postsynaptic potential)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0071333"(cellular response to glucose stimulus)|go:"GO:0097720"(calcineurin-mediated signaling)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:0099170"(postsynaptic modulation of chemical synaptic transmission)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:1903244"(positive regulation of cardiac muscle hypertrophy in response to stress)|go:"GO:1903799"(negative regulation of production of miRNAs involved in gene silencing by miRNA)|ensembl:ENSG00000138814(gene)|ensembl:ENST00000394854(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0001975"(response to amphetamine)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005955"(calcineurin complex)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006816"(calcium ion transport)|go:"GO:0007420"(brain development)|go:"GO:0007568"(aging)|go:"GO:0014883"(transition between fast and slow fiber)|go:"GO:0014898"(cardiac muscle hypertrophy in response to stress)|go:"GO:0016018"(cyclosporin A binding)|go:"GO:0016311"(dephosphorylation)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0030018"(Z disc)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0033173"(calcineurin-NFAT signaling cascade)|go:"GO:0033192"(calmodulin-dependent protein phosphatase activity)|go:"GO:0033555"(multicellular organismal response to stress)|go:"GO:0035562"(negative regulation of chromatin binding)|go:"GO:0036057"(slit diaphragm)|go:"GO:0042060"(wound healing)|go:"GO:0042110"(T cell activation)|go:"GO:0042383"(sarcolemma)|dip:DIP-6095N|entrezgene/locuslink:5530(identity) intact:EBI-16439789(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RqM4Q9x8EiLx7CyoF2Rvjl5RddM9606 rogid:kYtl+Yk39rbcDp5vIjH8WLsZysU9606 rigid:TBMBRaQOIBs3sHBRkxKucLjJI8U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6P597-2 uniprotkb:I6L9F6 intact:EBI-11033402|ensembl:ENSP00000466067 intact:EBI-10178578|intact:EBI-21999896 psi-mi:q6p597-2(display_long)|uniprotkb:KLC3(gene name)|psi-mi:KLC3(display_short)|uniprotkb:KLC2(gene name synonym)|uniprotkb:KLC2-like(gene name synonym)|uniprotkb:KLC2L(gene name synonym)|uniprotkb:kinesin light chain 2(gene name synonym) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471874 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1643885(isoform-parent)|uniprotkb:Q6P597-2(isoform-parent)|ensembl:ENSG00000104892(gene)|ensembl:ENST00000585434(transcript)|entrezgene/locuslink:147700(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16431586(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zVaRhvX9+4Aehqcmowox73QTJIM9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:A6QyR1rBN8hJrbSre9es50TL0H8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96HD9 intact:EBI-16472255 intact:EBI-3916242|ensembl:ENSP00000255082 - psi-mi:acy3_human(display_long)|uniprotkb:ACY3(gene name)|psi-mi:ACY3(display_short)|uniprotkb:Aspartoacylase-2(gene name synonym)|uniprotkb:ASPA2(gene name synonym)|uniprotkb:Acylase III(gene name synonym)|uniprotkb:Aminoacylase-3(gene name synonym)|uniprotkb:Hepatitis C virus core-binding protein 1(gene name synonym) psi-mi:"ccsb isoform id: pmm2_2"(display_short)|psi-mi:EBI-16472255(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472258 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_542389.1|ensembl:ENSG00000132744(gene)|ensembl:ENST00000255082(transcript)|go:"GO:0004046"(aminoacylase activity)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0016788"(hydrolase activity, acting on ester bonds)|go:"GO:0016811"("hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides")|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR007036(Succinylglutamate desuccinylase/aspartoacylase)|interpro:IPR016708(Aspartoacylase)|mint:Q96HD9|reactome:R-HSA-5423646|go:"GO:0005829"(cytosol)|entrezgene/locuslink:91703(identity) entrezgene/locuslink:5373(identity) intact:EBI-16433187(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Zjs7m7GTDeoVuV1/ggtGOu1LRhM9606 rogid:0YDh3c3stuQYjWrXuET8c1cw22E9606 rigid:u/mZ+BNuVWxcL4y4dvFNAZolHFY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96BA8 uniprotkb:P60201 intact:EBI-6942903|ensembl:ENSP00000481956|intact:MINT-268046|intact:MINT-8162577|uniprotkb:Q8N2D5|uniprotkb:Q96CP0 intact:EBI-8653150|uniprotkb:P06905|uniprotkb:P04400|intact:MINT-8164000|uniprotkb:Q502Y1|uniprotkb:Q6FHZ6|ensembl:ENSP00000481006|ensembl:ENSP00000484450 psi-mi:cr3l1_human(display_long)|uniprotkb:CREB3L1(gene name)|psi-mi:CREB3L1(display_short)|uniprotkb:OASIS(gene name synonym)|uniprotkb:PSEC0238(orf name)|uniprotkb:Old astrocyte specifically-induced substance(gene name synonym) psi-mi:mypr_human(display_long)|uniprotkb:PLP1(gene name)|psi-mi:PLP1(display_short)|uniprotkb:Lipophilin(gene name synonym)|uniprotkb:PLP(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472239 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000157613(gene)|ensembl:ENST00000621158(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001649"(osteoblast differentiation)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0032967"(positive regulation of collagen biosynthetic process)|go:"GO:0035497"(cAMP response element binding)|go:"GO:0040037"(negative regulation of fibroblast growth factor receptor signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046332"(SMAD binding)|go:"GO:0070278"(extracellular matrix constituent secretion)|go:"GO:1902236"(negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway)|go:"GO:1903671"(negative regulation of sprouting angiogenesis)|go:"GO:1990440"(positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR004827("Basic-leucine zipper (bZIP) transcription factor")|interpro:IPR029805|mint:Q96BA8|reactome:R-HSA-8874211|refseq:NP_443086.1|entrezgene/locuslink:90993(identity) refseq:NP_001291933.1|refseq:NP_955772.1|refseq:NP_000524.3|refseq:NP_001122306.1|ensembl:ENSG00000123560(gene)|ensembl:ENST00000612423(transcript)|ensembl:ENST00000621218(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006954"(inflammatory response)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0008366"(axon ensheathment)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014002"(astrocyte development)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0021762"(substantia nigra development)|go:"GO:0022010"(central nervous system myelination)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031175"(neuron projection development)|go:"GO:0034683"(integrin alphav-beta3 complex)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0061564"(axon development)|go:"GO:0098990"(AMPA selective glutamate receptor signaling pathway)|go:"GO:1904427"(positive regulation of calcium ion transmembrane transport)|interpro:IPR001614(Myelin proteolipid protein PLP)|interpro:IPR018237|mint:P60201|rcsb pdb:2XPG|entrezgene/locuslink:5354(identity) intact:EBI-16438810(see-also) comment:mint|function:"Transcription factor that acts during endoplasmic reticulum stress by activating unfolded protein response target genes. Specifically involved in ER-stress response in astrocytes in the central nervous system (By similartity). May play a role in gliosis. In vitro, binds to box-B element, cAMP response element (CRE) and CRE-like sequences, and activates transcription through box-B element but not through CRE" comment:mint caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:sMWUFmBeBBCO+T0Y2CuB/un1lBg9606 rogid:b7pt7FJVt10Iu1tTMeiVYEu5r/k9606 rigid:iwOcglLOmsndgtDROLLCVL52mmo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P60201 uniprotkb:Q16849-3 intact:EBI-8653150|uniprotkb:P06905|uniprotkb:P04400|intact:MINT-8164000|uniprotkb:Q502Y1|uniprotkb:Q6FHZ6|ensembl:ENSP00000481006|ensembl:ENSP00000484450 intact:EBI-10200782|ensembl:ENSP00000392598 psi-mi:mypr_human(display_long)|uniprotkb:PLP1(gene name)|psi-mi:PLP1(display_short)|uniprotkb:Lipophilin(gene name synonym)|uniprotkb:PLP(gene name synonym) psi-mi:q16849-3(display_long)|uniprotkb:ICA3(gene name synonym)|uniprotkb:ICA512(gene name synonym)|uniprotkb:Islet cell antigen 512(gene name synonym)|uniprotkb:Islet cell autoantigen 3(gene name synonym)|uniprotkb:PTP IA-2(gene name synonym)|uniprotkb:PTPRN(gene name)|psi-mi:PTPRN(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472220 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001291933.1|refseq:NP_955772.1|refseq:NP_000524.3|refseq:NP_001122306.1|ensembl:ENSG00000123560(gene)|ensembl:ENST00000612423(transcript)|ensembl:ENST00000621218(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006954"(inflammatory response)|go:"GO:0007268"(chemical synaptic transmission)|go:"GO:0008366"(axon ensheathment)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0014002"(astrocyte development)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0021762"(substantia nigra development)|go:"GO:0022010"(central nervous system myelination)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0031175"(neuron projection development)|go:"GO:0034683"(integrin alphav-beta3 complex)|go:"GO:0042759"(long-chain fatty acid biosynthetic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0043209"(myelin sheath)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045202"(synapse)|go:"GO:0061564"(axon development)|go:"GO:0098990"(AMPA selective glutamate receptor signaling pathway)|go:"GO:1904427"(positive regulation of calcium ion transmembrane transport)|interpro:IPR001614(Myelin proteolipid protein PLP)|interpro:IPR018237|mint:P60201|rcsb pdb:2XPG|entrezgene/locuslink:5354(identity) intact:EBI-728153(isoform-parent)|ensembl:ENSG00000054356(gene)|ensembl:ENST00000423636(transcript)|uniprotkb:Q16849-3(isoform-parent)|entrezgene/locuslink:5798(identity) intact:EBI-16434953(see-also) comment:mint isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:b7pt7FJVt10Iu1tTMeiVYEu5r/k9606 rogid:i147CXtVMOlCBDl3Wto2zw6GSPU9606 rigid:5se/Z0tdMjX2p6qCjvM39i7JpqI true - sufficient binding region:299-889 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9P2K3-2 uniprotkb:Q96EK2 intact:EBI-1504830|ensembl:ENSP00000355973 intact:EBI-16472119|ensembl:ENSP00000324403|uniprotkb:B0QYW3|uniprotkb:B0QYW4|uniprotkb:B3KRU4|uniprotkb:B7Z4F8|uniprotkb:Q5TFL2|uniprotkb:Q6ICC0 psi-mi:q9p2k3-2(display_long)|uniprotkb:RCOR3(gene name)|psi-mi:RCOR3(display_short)|uniprotkb:KIAA1343(gene name synonym) psi-mi:pf21b_human(display_long)|uniprotkb:PHF21B(gene name)|psi-mi:PHF21B(display_short)|uniprotkb:KIAA1661(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000117625(gene)|ensembl:ENST00000367006(transcript)|intact:EBI-743428(isoform-parent)|uniprotkb:Q9P2K3-2(isoform-parent)|entrezgene/locuslink:55758(identity) ensembl:ENSG00000056487(gene)|ensembl:ENST00000313237(transcript)|go:"GO:0046872"(metal ion binding)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019787|mint:Q96EK2|refseq:NP_001129334.1|refseq:NP_001229379.1|refseq:NP_001271225.1|refseq:NP_612424.1|refseq:XP_006724185.1|entrezgene/locuslink:112885(identity) intact:EBI-16440174(see-also)|intact:EBI-16440184(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RU9KkQB+JnxYVfG5IlAeNKnVFjw9606 rogid:FhssIBtwxKIFiyGylNLhTTFcyrI9606 rigid:tmtF2t8tQ5EsOCjtO44Y/bx6pJY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N9N5-2 uniprotkb:Q96EK2 intact:EBI-11524452|ensembl:ENSP00000347125 intact:EBI-16472119|ensembl:ENSP00000324403|uniprotkb:B0QYW3|uniprotkb:B0QYW4|uniprotkb:B3KRU4|uniprotkb:B7Z4F8|uniprotkb:Q5TFL2|uniprotkb:Q6ICC0 psi-mi:q8n9n5-2(display_long)|uniprotkb:BANP(gene name)|psi-mi:BANP(display_short)|uniprotkb:BEN domain-containing protein 1(gene name synonym)|uniprotkb:BEND1(gene name synonym)|uniprotkb:Btg3-associated nuclear protein(gene name synonym)|uniprotkb:SMAR1(gene name synonym)|uniprotkb:Scaffold/matrix-associated region-1-binding protein(gene name synonym) psi-mi:pf21b_human(display_long)|uniprotkb:PHF21B(gene name)|psi-mi:PHF21B(display_short)|uniprotkb:KIAA1661(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472186 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000172530(gene)|ensembl:ENST00000355022(transcript)|intact:EBI-744695(isoform-parent)|uniprotkb:Q8N9N5-2(isoform-parent)|entrezgene/locuslink:54971(identity) ensembl:ENSG00000056487(gene)|ensembl:ENST00000313237(transcript)|go:"GO:0046872"(metal ion binding)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019787|mint:Q96EK2|refseq:NP_001129334.1|refseq:NP_001229379.1|refseq:NP_001271225.1|refseq:NP_612424.1|refseq:XP_006724185.1|entrezgene/locuslink:112885(identity) intact:EBI-16437800(see-also)|intact:EBI-16437810(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ESe6iCAhvq+i57fQHz3rGyg6UOo9606 rogid:FhssIBtwxKIFiyGylNLhTTFcyrI9606 rigid:DOVGuKuwNdi0gREbZoVxrSYJppo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:Q96EK2-3 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-16437793|ensembl:ENSP00000487086 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:q96ek2-3(display_long)|uniprotkb:PHF21B(gene name)|psi-mi:PHF21B(display_short)|uniprotkb:KIAA1661(gene name synonym)|uniprotkb:3(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472170 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) ensembl:ENST00000629843(transcript)|ensembl:ENSG00000056487(gene)|intact:EBI-16472119(isoform-parent)|uniprotkb:Q96EK2-3(isoform-parent)|entrezgene/locuslink:112885(identity) intact:EBI-16434037(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:9SKSd1jo6PtvaF/ASqHgPFhu8aA9606 rigid:j1oPjYc7jmKeaQKidkQQlq/2GZI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:Q96EK2 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-16472119|ensembl:ENSP00000324403|uniprotkb:B0QYW3|uniprotkb:B0QYW4|uniprotkb:B3KRU4|uniprotkb:B7Z4F8|uniprotkb:Q5TFL2|uniprotkb:Q6ICC0 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:pf21b_human(display_long)|uniprotkb:PHF21B(gene name)|psi-mi:PHF21B(display_short)|uniprotkb:KIAA1661(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472154 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) ensembl:ENSG00000056487(gene)|ensembl:ENST00000313237(transcript)|go:"GO:0046872"(metal ion binding)|interpro:IPR001965(Zinc finger, PHD-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR019787|mint:Q96EK2|refseq:NP_001129334.1|refseq:NP_001229379.1|refseq:NP_001271225.1|refseq:NP_612424.1|refseq:XP_006724185.1|entrezgene/locuslink:112885(identity) intact:EBI-16434037(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:FhssIBtwxKIFiyGylNLhTTFcyrI9606 rigid:Uos2STIXhb3b4aMIQYQls3Uv5ns true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NWT1 uniprotkb:Q04864-2 intact:EBI-7641942|ensembl:ENSP00000368887|ensembl:ENSP00000496482|uniprotkb:Q5T4J2|uniprotkb:Q96T87|intact:MINT-3057412|uniprotkb:Q96QJ8 intact:EBI-10829018|ensembl:ENSP00000377989 psi-mi:pk1ip_human(display_long)|uniprotkb:PAK1IP1(gene name)|psi-mi:PAK1IP1(display_short)|uniprotkb:PIP1(gene name synonym)|uniprotkb:WDR84(gene name synonym)|uniprotkb:PAK1-interacting protein 1(gene name synonym)|uniprotkb:PAK/PLC-interacting protein 1(gene name synonym)|uniprotkb:WD repeat-containing protein 84(gene name synonym) psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000111845(gene)|ensembl:ENSG00000285226(gene)|ensembl:ENST00000379568(transcript)|ensembl:ENST00000644756(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009968"(negative regulation of signal transduction)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0060021"(roof of mouth development)|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q9NWT1|refseq:NP_060376.2|entrezgene/locuslink:55003(identity) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) intact:EBI-16435768(see-also) comment:mint|function:Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42 isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nAGXksSPZ1aDBtcWOP59JX/lQGA9606 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rigid:+iNGwo1wK5QcKqQ4zUPD6I63vj4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NWT1 uniprotkb:P31323 intact:EBI-7641942|ensembl:ENSP00000368887|ensembl:ENSP00000496482|uniprotkb:Q5T4J2|uniprotkb:Q96T87|intact:MINT-3057412|uniprotkb:Q96QJ8 intact:EBI-2930670|ensembl:ENSP00000265717|ensembl:ENSP00000491687|uniprotkb:A4D0R9 psi-mi:pk1ip_human(display_long)|uniprotkb:PAK1IP1(gene name)|psi-mi:PAK1IP1(display_short)|uniprotkb:PIP1(gene name synonym)|uniprotkb:WDR84(gene name synonym)|uniprotkb:PAK1-interacting protein 1(gene name synonym)|uniprotkb:PAK/PLC-interacting protein 1(gene name synonym)|uniprotkb:WD repeat-containing protein 84(gene name synonym) psi-mi:kap3_human(display_long)|uniprotkb:PRKAR2B(gene name)|psi-mi:PRKAR2B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472087 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000111845(gene)|ensembl:ENSG00000285226(gene)|ensembl:ENST00000379568(transcript)|ensembl:ENST00000644756(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0008283"(cell population proliferation)|go:"GO:0009968"(negative regulation of signal transduction)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0060021"(roof of mouth development)|go:"GO:1901796"(regulation of signal transduction by p53 class mediator)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|mint:Q9NWT1|refseq:NP_060376.2|entrezgene/locuslink:55003(identity) ensembl:ENSG00000005249(gene)|ensembl:ENSG00000284096(gene)|ensembl:ENST00000265717(transcript)|ensembl:ENST00000639737(transcript)|go:"GO:0004862"(cAMP-dependent protein kinase inhibitor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006631"(fatty acid metabolic process)|go:"GO:0005952"(cAMP-dependent protein kinase complex)|go:"GO:0007612"(learning)|go:"GO:0008603"(cAMP-dependent protein kinase regulator activity)|go:"GO:0010738"(regulation of protein kinase A signaling)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030552"(cAMP binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043197"(dendritic spine)|go:"GO:0043198"(dendritic shaft)|go:"GO:0043949"(regulation of cAMP-mediated signaling)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050804"(modulation of chemical synaptic transmission)|go:"GO:0070062"(extracellular exosome)|go:"GO:0097332"(response to antipsychotic drug)|go:"GO:0097338"(response to clozapine)|go:"GO:0097546"(ciliary base)|go:"GO:0098978"(glutamatergic synapse)|go:"GO:2000480"(negative regulation of cAMP-dependent protein kinase activity)|interpro:IPR000595(Cyclic nucleotide-binding)|interpro:IPR003117(cAMP-dependent protein kinase, regulatory subunit, type I/II alpha/beta)|interpro:IPR012198(cAMP-dependent protein kinase regulatory subunit)|interpro:IPR014710(RmlC-like jelly roll fold)|interpro:IPR018488|interpro:IPR018490|mint:P31323|reactome:R-HSA-163615|reactome:R-HSA-164378|reactome:R-HSA-180024|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-381676|reactome:R-HSA-432040|reactome:R-HSA-442720|reactome:R-HSA-5610787|reactome:R-HSA-5620912|reactome:R-HSA-8854518|reactome:R-HSA-9660821|reactome:R-HSA-9664323|reactome:R-HSA-983231|refseq:NP_002727.2|dip:DIP-554N|entrezgene/locuslink:5577(identity) intact:EBI-16431733(see-also) comment:mint|function:Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nAGXksSPZ1aDBtcWOP59JX/lQGA9606 rogid:P643dCCYtpt/EkR7tmZrbo97FLE9606 rigid:h4XXAW4XX4GP4DPWk7kg7yghHRA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q86SE8-2 uniprotkb:P06748 intact:EBI-12193061|ensembl:ENSP00000370941|ensembl:ENSP00000481018 intact:EBI-78579|uniprotkb:P08693|uniprotkb:Q12826|uniprotkb:Q13440|uniprotkb:Q13441|uniprotkb:Q14115|uniprotkb:Q5EU94|uniprotkb:Q5EU95|uniprotkb:Q5EU96|uniprotkb:Q5EU97|uniprotkb:Q5EU98|uniprotkb:Q5EU99|uniprotkb:Q6V962|uniprotkb:Q8WTW5|uniprotkb:Q96AT6|uniprotkb:Q96DC4|uniprotkb:Q96EA5|uniprotkb:A8K3N7|uniprotkb:B5BU00|uniprotkb:Q9UDJ7|uniprotkb:D3DQL6|uniprotkb:Q9BYG9|ensembl:ENSP00000296930|ensembl:ENSP00000428755 psi-mi:q86se8-2(display_long)|uniprotkb:NPM2(gene name)|psi-mi:NPM2(display_short) psi-mi:npm_human(display_long)|uniprotkb:NPM1(gene name)|psi-mi:NPM1(display_short)|uniprotkb:NPM(gene name synonym)|uniprotkb:Nucleolar phosphoprotein B23(gene name synonym)|uniprotkb:Numatrin(gene name synonym)|uniprotkb:Nucleolar protein NO38(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472071 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-6658150(isoform-parent)|ensembl:ENSG00000158806(gene)|ensembl:ENST00000381530(transcript)|ensembl:ENST00000615914(transcript)|uniprotkb:Q86SE8-2(isoform-parent)|entrezgene/locuslink:10361(identity) refseq:NP_002511.1|refseq:NP_954654.1|refseq:NP_001032827.1|dip:DIP-30932N|ensembl:ENSG00000181163(gene)|ensembl:ENST00000296930(transcript)|ensembl:ENST00000517671(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000056"(ribosomal small subunit export from nucleus)|go:"GO:0001046"(core promoter sequence-specific DNA binding)|go:"GO:0001558"(regulation of cell growth)|go:"GO:0001652"(granular component)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0004860"(protein kinase inhibitor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005925"(focal adhesion)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006407"(rRNA export from nucleus)|go:"GO:0006884"(cell volume homeostasis)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006913"(nucleocytoplasmic transport)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007165"(signal transduction)|go:"GO:0007569"(cell aging)|go:"GO:0008104"(protein localization)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010824"(regulation of centrosome duplication)|go:"GO:0010825"(positive regulation of centrosome duplication)|go:"GO:0010826"(negative regulation of centrosome duplication)|go:"GO:0015934"(large ribosomal subunit)|go:"GO:0015935"(small ribosomal subunit)|go:"GO:0016020"(membrane)|go:"GO:0016607"(nuclear speck)|go:"GO:0019843"(rRNA binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030957"(Tat protein binding)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0031616"(spindle pole centrosome)|go:"GO:0032071"(regulation of endodeoxyribonuclease activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0032993"(protein-DNA complex)|go:"GO:0034644"(cellular response to UV)|go:"GO:0042255"(ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0042393"(histone binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043516"(regulation of DNA damage response, signal transduction by p53 class mediator)|go:"GO:0044387"(negative regulation of protein kinase activity by regulation of protein phosphorylation)|go:"GO:0045727"(positive regulation of translation)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046599"(regulation of centriole replication)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0050821"(protein stabilization)|go:"GO:0051059"(NF-kappaB binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0060699"(regulation of endoribonuclease activity)|go:"GO:0060735"(regulation of eIF2 alpha phosphorylation by dsRNA)|go:"GO:0140297"(DNA-binding transcription factor binding)|go:"GO:1902629"(regulation of mRNA stability involved in cellular response to UV)|go:"GO:1902751"(positive regulation of cell cycle G2/M phase transition)|go:"GO:1904751"(positive regulation of protein localization to nucleolus)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR004301(Nucleoplasmin)|interpro:IPR024057|interpro:IPR032569|interpro:IPR036824|mint:P06748|rcsb pdb:2LLH|rcsb pdb:2P1B|rcsb pdb:2VXD|rcsb pdb:5EHD|reactome:R-HSA-180746|reactome:R-HSA-3899300|reactome:R-HSA-606279|reactome:R-HSA-6804115|reactome:R-HSA-8869496|entrezgene/locuslink:4869(identity) intact:EBI-16431830(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/shy9sQPj5fdrbQSf7adFExPv509606 rogid:HJ7Mg+XsIhuJiScPKiI0dIa6KpM9606 rigid:Eu7F8xODXGCQodPaIdotgvqU9aU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15942 uniprotkb:P56597 intact:EBI-444225|ensembl:ENSP00000324422|ensembl:ENSP00000494798|uniprotkb:Q6I9S4|uniprotkb:A4D2G6|uniprotkb:B4DQX7 intact:EBI-740667|ensembl:ENSP00000265191|uniprotkb:B2R5G7 psi-mi:zyx_human(display_long)|uniprotkb:Zyxin-2(gene name synonym)|uniprotkb:ZYX(gene name)|psi-mi:ZYX(display_short) psi-mi:ndk5_human(display_long)|uniprotkb:nm23-H5(gene name synonym)|uniprotkb:Testis-specific nm23 homolog(gene name synonym)|uniprotkb:Inhibitor of p53-induced apoptosis-beta(gene name synonym)|uniprotkb:NME5(gene name)|psi-mi:NME5(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472055 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000159840(gene)|ensembl:ENSG00000285443(gene)|ensembl:ENST00000322764(transcript)|ensembl:ENST00000646695(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005912"(adherens junction)|go:"GO:0005925"(focal adhesion)|go:"GO:0007160"(cell-matrix adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007229"(integrin-mediated signaling pathway)|go:"GO:0007267"(cell-cell signaling)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0045335"(phagocytic vesicle)|go:"GO:0046872"(metal ion binding)|go:"GO:0050727"(regulation of inflammatory response)|go:"GO:0071346"(cellular response to interferon-gamma)|interpro:IPR001781(Zinc finger, LIM-type)|go:"GO:0043149"(stress fiber assembly)|refseq:NP_001010972.1|refseq:NP_003452.1|entrezgene/locuslink:7791(identity) refseq:NP_003542.1|ensembl:ENSG00000112981(gene)|ensembl:ENST00000265191(transcript)|go:"GO:0003351"(epithelial cilium movement involved in extracellular fluid movement)|go:"GO:0004550"(nucleoside diphosphate kinase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005929"(cilium)|go:"GO:0006183"(GTP biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006241"(CTP biosynthetic process)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007286"(spermatid development)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0021591"(ventricular system development)|go:"GO:0036126"(sperm flagellum)|go:"GO:0060271"(cilium assembly)|go:"GO:1902176"(negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR001564(Nucleoside diphosphate kinase, core)|interpro:IPR007858(Dpy-30)|interpro:IPR012410(Nucleoside-diphosphate kinase-like NDK-H5)|interpro:IPR034907|interpro:IPR036850|entrezgene/locuslink:8382(identity) intact:EBI-16434589(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4UC6NVZHDUrTy4sPhz7e7RpPwho9606 rogid:flqa+tg4JH0cBA5svsCSdmuGYys9606 rigid:lSGJdFmVd3xO/S/6vPO3jtF/Jvo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TAP6 uniprotkb:P56597 intact:EBI-742887|ensembl:ENSP00000262127|uniprotkb:Q658N5|uniprotkb:Q9H9U7|uniprotkb:B0YJB2|uniprotkb:B4DXG5|uniprotkb:B4DZW1 intact:EBI-740667|ensembl:ENSP00000265191|uniprotkb:B2R5G7 psi-mi:cep76_human(display_long)|uniprotkb:CEP76(gene name)|psi-mi:CEP76(display_short)|uniprotkb:C18orf9(gene name synonym) psi-mi:ndk5_human(display_long)|uniprotkb:nm23-H5(gene name synonym)|uniprotkb:Testis-specific nm23 homolog(gene name synonym)|uniprotkb:Inhibitor of p53-induced apoptosis-beta(gene name synonym)|uniprotkb:NME5(gene name)|psi-mi:NME5(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472039 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_079175.2|ensembl:ENSG00000101624(gene)|ensembl:ENST00000262127(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0005829"(cytosol)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046599"(regulation of centriole replication)|interpro:IPR028926|interpro:IPR038765|mint:Q8TAP6|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_001258918.1|entrezgene/locuslink:79959(identity) refseq:NP_003542.1|ensembl:ENSG00000112981(gene)|ensembl:ENST00000265191(transcript)|go:"GO:0003351"(epithelial cilium movement involved in extracellular fluid movement)|go:"GO:0004550"(nucleoside diphosphate kinase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005929"(cilium)|go:"GO:0006183"(GTP biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006241"(CTP biosynthetic process)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007286"(spermatid development)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0021591"(ventricular system development)|go:"GO:0036126"(sperm flagellum)|go:"GO:0060271"(cilium assembly)|go:"GO:1902176"(negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway)|interpro:IPR001564(Nucleoside diphosphate kinase, core)|interpro:IPR007858(Dpy-30)|interpro:IPR012410(Nucleoside-diphosphate kinase-like NDK-H5)|interpro:IPR034907|interpro:IPR036850|entrezgene/locuslink:8382(identity) intact:EBI-16430546(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fWzb8oIU35oVWomyDrf8u5sbxUk9606 rogid:flqa+tg4JH0cBA5svsCSdmuGYys9606 rigid:GE1IIt+yVfHQh11pD8DxPa0imMc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:Q9NZ94-2 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16423037 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:q9nz94-2(display_long)|uniprotkb:NLGN3(gene name)|psi-mi:NLGN3(display_short)|uniprotkb:KIAA1480(gene name synonym)|uniprotkb:NL3(gene name synonym)|uniprotkb:HNL3(isoform synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472023 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) uniprotkb:Q9NZ94(isoform-parent)|uniprotkb:Q9NZ94-2(isoform-parent)|entrezgene/locuslink:54413(identity) intact:EBI-16431179(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:zJAbB1paiNIkvVmQQT638+rczN49606 rigid:v/e5UXz62BGKyIqA+6CxC44kTjQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5JR59-3 uniprotkb:P07196 intact:EBI-11522433|ensembl:ENSP00000370186 intact:EBI-475646|uniprotkb:Q16154|uniprotkb:B9ZVN2|uniprotkb:Q8IU72|ensembl:ENSP00000482169 psi-mi:q5jr59-3(display_long)|uniprotkb:MTUS2(gene name)|psi-mi:MTUS2(display_short)|uniprotkb:CAZIP(gene name synonym)|uniprotkb:Cardiac zipper protein(gene name synonym)|uniprotkb:KIAA0774(gene name synonym)|uniprotkb:Microtubule plus-end tracking protein TIP150(gene name synonym)|uniprotkb:TIP150(gene name synonym) psi-mi:nfl_human(display_long)|uniprotkb:Neurofilament triplet L protein(gene name synonym)|uniprotkb:68 kDa neurofilament protein(gene name synonym)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short)|uniprotkb:NF68(gene name synonym)|uniprotkb:NFL(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472004 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000132938(gene)|ensembl:ENST00000380808(transcript)|intact:EBI-742948(isoform-parent)|uniprotkb:Q5JR59-3(isoform-parent)|entrezgene/locuslink:23281(identity) refseq:NP_006149.2|ensembl:ENSG00000277586(gene)|ensembl:ENST00000610854(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005883"(neurofilament)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014012"(peripheral nervous system axon regeneration)|go:"GO:0019896"(axonal transport of mitochondrion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030424"(axon)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031133"(regulation of axon diameter)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0033693"(neurofilament bundle assembly)|go:"GO:0040011"(locomotion)|go:"GO:0042802"(identical protein binding)|go:"GO:0030426"(growth cone)|go:"GO:0043274"(phospholipase binding)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045105"(intermediate filament polymerization or depolymerization)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0051258"(protein polymerization)|go:"GO:0051412"(response to corticosterone)|go:"GO:0060052"(neurofilament cytoskeleton organization)|go:"GO:0060074"(synapse maturation)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098981"(cholinergic synapse)|go:"GO:0099160"(postsynaptic intermediate filament cytoskeleton)|go:"GO:0099182"(presynaptic intermediate filament cytoskeleton)|go:"GO:0099184"(structural constituent of postsynaptic intermediate filament cytoskeleton)|go:"GO:1903935"(response to sodium arsenite)|go:"GO:1903937"(response to acrylamide)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR027692|interpro:IPR039008|mint:P07196|reactome:R-HSA-438066|reactome:R-HSA-442982|reactome:R-HSA-5673001|reactome:R-HSA-9609736|reactome:R-HSA-9617324|reactome:R-HSA-9620244|entrezgene/locuslink:4747(identity) intact:EBI-16440868(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:npId9tC7VoLN/jteoBiRbSYChPs9606 rogid:tgdjWnqcql4YMbd89ujbDoqN/Yg9606 rigid:/jMaClIPjc+ha5XXS/pnkXE3rKg true - sufficient binding region:1-377 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P0C7W6 uniprotkb:I6L9F6 intact:EBI-2548868|ensembl:ENSP00000329860 intact:EBI-10178578|intact:EBI-21999896 psi-mi:cc172_human(display_long)|uniprotkb:CCDC172(gene name)|psi-mi:CCDC172(display_short)|uniprotkb:C10orf96(gene name synonym) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471988 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_940917.1|ensembl:ENSG00000182645(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0097225"(sperm midpiece)|interpro:IPR029618|mint:P0C7W6|ensembl:ENST00000333254(transcript)|refseq:XP_016871695.1|entrezgene/locuslink:374355(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16440694(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JAaMYXob1bjFtiCvHmuzgCvq+FU9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:bqt5fey0jbY+6v3HCfGp1oRV1NM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16439879 uniprotkb:I6L9F6 - intact:EBI-10178578|intact:EBI-21999896 psi-mi:"ccsb orf id: 8359"(display_short)|psi-mi:EBI-16439879(display_long) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471972 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:80125(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16439881(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:poddy6+Qr+z8s1U2xyFnXJ05O6Y9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:8QaA/MJgLnCNAFv2+GUWm1wL1rQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:P07196 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-475646|uniprotkb:Q16154|uniprotkb:B9ZVN2|uniprotkb:Q8IU72|ensembl:ENSP00000482169 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:nfl_human(display_long)|uniprotkb:Neurofilament triplet L protein(gene name synonym)|uniprotkb:68 kDa neurofilament protein(gene name synonym)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short)|uniprotkb:NF68(gene name synonym)|uniprotkb:NFL(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471953 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) refseq:NP_006149.2|ensembl:ENSG00000277586(gene)|ensembl:ENST00000610854(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005883"(neurofilament)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014012"(peripheral nervous system axon regeneration)|go:"GO:0019896"(axonal transport of mitochondrion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030424"(axon)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031133"(regulation of axon diameter)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0033693"(neurofilament bundle assembly)|go:"GO:0040011"(locomotion)|go:"GO:0042802"(identical protein binding)|go:"GO:0030426"(growth cone)|go:"GO:0043274"(phospholipase binding)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045105"(intermediate filament polymerization or depolymerization)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0051258"(protein polymerization)|go:"GO:0051412"(response to corticosterone)|go:"GO:0060052"(neurofilament cytoskeleton organization)|go:"GO:0060074"(synapse maturation)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098981"(cholinergic synapse)|go:"GO:0099160"(postsynaptic intermediate filament cytoskeleton)|go:"GO:0099182"(presynaptic intermediate filament cytoskeleton)|go:"GO:0099184"(structural constituent of postsynaptic intermediate filament cytoskeleton)|go:"GO:1903935"(response to sodium arsenite)|go:"GO:1903937"(response to acrylamide)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR027692|interpro:IPR039008|mint:P07196|reactome:R-HSA-438066|reactome:R-HSA-442982|reactome:R-HSA-5673001|reactome:R-HSA-9609736|reactome:R-HSA-9617324|reactome:R-HSA-9620244|entrezgene/locuslink:4747(identity) intact:EBI-16439839(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:tgdjWnqcql4YMbd89ujbDoqN/Yg9606 rigid:40LNdlMQMqMBRSwO1sTKaSPtIJQ true - sufficient binding region:1-377 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:P07196 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-475646|uniprotkb:Q16154|uniprotkb:B9ZVN2|uniprotkb:Q8IU72|ensembl:ENSP00000482169 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:nfl_human(display_long)|uniprotkb:Neurofilament triplet L protein(gene name synonym)|uniprotkb:68 kDa neurofilament protein(gene name synonym)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short)|uniprotkb:NF68(gene name synonym)|uniprotkb:NFL(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471931 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_006149.2|ensembl:ENSG00000277586(gene)|ensembl:ENST00000610854(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005883"(neurofilament)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014012"(peripheral nervous system axon regeneration)|go:"GO:0019896"(axonal transport of mitochondrion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030424"(axon)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031133"(regulation of axon diameter)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0033693"(neurofilament bundle assembly)|go:"GO:0040011"(locomotion)|go:"GO:0042802"(identical protein binding)|go:"GO:0030426"(growth cone)|go:"GO:0043274"(phospholipase binding)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045105"(intermediate filament polymerization or depolymerization)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0051258"(protein polymerization)|go:"GO:0051412"(response to corticosterone)|go:"GO:0060052"(neurofilament cytoskeleton organization)|go:"GO:0060074"(synapse maturation)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098981"(cholinergic synapse)|go:"GO:0099160"(postsynaptic intermediate filament cytoskeleton)|go:"GO:0099182"(presynaptic intermediate filament cytoskeleton)|go:"GO:0099184"(structural constituent of postsynaptic intermediate filament cytoskeleton)|go:"GO:1903935"(response to sodium arsenite)|go:"GO:1903937"(response to acrylamide)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR027692|interpro:IPR039008|mint:P07196|reactome:R-HSA-438066|reactome:R-HSA-442982|reactome:R-HSA-5673001|reactome:R-HSA-9609736|reactome:R-HSA-9617324|reactome:R-HSA-9620244|entrezgene/locuslink:4747(identity) intact:EBI-16438528(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:tgdjWnqcql4YMbd89ujbDoqN/Yg9606 rigid:gVbM/IrSNp1AIb2n/qpYN8tIadc true sufficient binding region:383-1002 sufficient binding region:1-377 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IYF3-3 uniprotkb:P07196 intact:EBI-11523345|ensembl:ENSP00000363453 intact:EBI-475646|uniprotkb:Q16154|uniprotkb:B9ZVN2|uniprotkb:Q8IU72|ensembl:ENSP00000482169 psi-mi:q8iyf3-3(display_long)|uniprotkb:TEX11(gene name)|psi-mi:TEX11(display_short)|uniprotkb:Protein ZIP4 homolog(gene name synonym)|uniprotkb:ZIP4(gene name synonym) psi-mi:nfl_human(display_long)|uniprotkb:Neurofilament triplet L protein(gene name synonym)|uniprotkb:68 kDa neurofilament protein(gene name synonym)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short)|uniprotkb:NF68(gene name synonym)|uniprotkb:NFL(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471909 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000120498(gene)|ensembl:ENST00000374333(transcript)|intact:EBI-742397(isoform-parent)|uniprotkb:Q8IYF3-3(isoform-parent)|entrezgene/locuslink:56159(identity) refseq:NP_006149.2|ensembl:ENSG00000277586(gene)|ensembl:ENST00000610854(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005883"(neurofilament)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008089"(anterograde axonal transport)|go:"GO:0008090"(retrograde axonal transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014012"(peripheral nervous system axon regeneration)|go:"GO:0019896"(axonal transport of mitochondrion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021510"(spinal cord development)|go:"GO:0021766"(hippocampus development)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030424"(axon)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031133"(regulation of axon diameter)|go:"GO:0031594"(neuromuscular junction)|go:"GO:0033693"(neurofilament bundle assembly)|go:"GO:0040011"(locomotion)|go:"GO:0042802"(identical protein binding)|go:"GO:0030426"(growth cone)|go:"GO:0043274"(phospholipase binding)|go:"GO:0043434"(response to peptide hormone)|go:"GO:0043524"(negative regulation of neuron apoptotic process)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045105"(intermediate filament polymerization or depolymerization)|go:"GO:0045109"(intermediate filament organization)|go:"GO:0048812"(neuron projection morphogenesis)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0050885"(neuromuscular process controlling balance)|go:"GO:0051258"(protein polymerization)|go:"GO:0051412"(response to corticosterone)|go:"GO:0060052"(neurofilament cytoskeleton organization)|go:"GO:0060074"(synapse maturation)|go:"GO:0098685"(Schaffer collateral - CA1 synapse)|go:"GO:0098981"(cholinergic synapse)|go:"GO:0099160"(postsynaptic intermediate filament cytoskeleton)|go:"GO:0099182"(presynaptic intermediate filament cytoskeleton)|go:"GO:0099184"(structural constituent of postsynaptic intermediate filament cytoskeleton)|go:"GO:1903935"(response to sodium arsenite)|go:"GO:1903937"(response to acrylamide)|go:"GO:1904115"(axon cytoplasm)|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR018039|interpro:IPR027692|interpro:IPR039008|mint:P07196|reactome:R-HSA-438066|reactome:R-HSA-442982|reactome:R-HSA-5673001|reactome:R-HSA-9609736|reactome:R-HSA-9617324|reactome:R-HSA-9620244|entrezgene/locuslink:4747(identity) intact:EBI-16432766(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PUAMFmnm5ZV2rnJ1rhm9ZeRCixg9606 rogid:tgdjWnqcql4YMbd89ujbDoqN/Yg9606 rigid:FVfBArJib5IuVn0U1Lt/RjVHkA8 true sufficient binding region:9-925 sufficient binding region:1-377 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:I6L9F6 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-10178578|intact:EBI-21999896 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:i6l9f6_human(display_long)|uniprotkb:NEFL(gene name)|psi-mi:NEFL(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16471890 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) interpro:IPR039008|interpro:IPR006821(Intermediate filament, DNA-binding region)|interpro:IPR027692|go:"GO:0005883"(neurofilament)|go:"GO:0061564"(axon development)|entrezgene/locuslink:4747(identity) intact:EBI-16431902(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:iummVkzByLKqPeBNfjI32TYXy1k9606 rigid:v8+T373idqYQsdVrdh3nra4+znk true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P62140 uniprotkb:O60237-2 intact:EBI-352350|uniprotkb:P37140|uniprotkb:Q5U087|uniprotkb:Q6FG45|uniprotkb:D6W565|uniprotkb:B2R5V4|ensembl:ENSP00000296122|ensembl:ENSP00000351298|ensembl:ENSP00000378769 intact:EBI-10700351|ensembl:ENSP00000349206 psi-mi:pp1b_human(display_long)|uniprotkb:PPP1CB(gene name)|psi-mi:PPP1CB(display_short) psi-mi:o60237-2(display_long)|uniprotkb:PPP1R12B(gene name)|psi-mi:PPP1R12B(display_short)|uniprotkb:MYPT2(gene name synonym)|uniprotkb:Myosin phosphatase-targeting subunit 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002700.1|refseq:NP_996759.1|ensembl:ENSG00000213639(gene)|ensembl:ENST00000296122(transcript)|ensembl:ENST00000358506(transcript)|ensembl:ENST00000395366(transcript)|go:"GO:0000164"(protein phosphatase type 1 complex)|go:"GO:0000165"(MAPK cascade)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0005977"(glycogen metabolic process)|go:"GO:0005979"(regulation of glycogen biosynthetic process)|go:"GO:0005981"(regulation of glycogen catabolic process)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0016791"(phosphatase activity)|go:"GO:0017018"(myosin phosphatase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030155"(regulation of cell adhesion)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0042587"(glycogen granule)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0043153"(entrainment of circadian clock by photoperiod)|go:"GO:0046872"(metal ion binding)|go:"GO:0050115"(myosin-light-chain-phosphatase activity)|go:"GO:0051301"(cell division)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072357"(PTW/PP1 phosphatase complex)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|interpro:IPR031675|mint:P62140|reactome:R-HSA-163560|reactome:R-HSA-2173788|reactome:R-HSA-2565942|reactome:R-HSA-400253|reactome:R-HSA-5625740|reactome:R-HSA-5625900|reactome:R-HSA-5627117|reactome:R-HSA-5627123|reactome:R-HSA-5673000|reactome:R-HSA-9660537|dip:DIP-33220N|entrezgene/locuslink:5500(identity) ensembl:ENSG00000077157(gene)|ensembl:ENST00000356764(transcript)|intact:EBI-2558026(isoform-parent)|uniprotkb:O60237-2(isoform-parent)|entrezgene/locuslink:4660(identity) intact:EBI-16434212(see-also) - isoform-comment:Produced by alternative splicing of isoform 1. No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VtNJVyimeiEuRDDWtGswTqoSOH89606 rogid:vroZRva3UhIrZLt/UaNvIhLoZWI9606 rigid:uJwnf7n0u3j9E9KKWB24k9OT1Jk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978 uniprotkb:Q96PK6 intact:EBI-304185|intact:EBI-28971491|ensembl:ENSP00000317788|ensembl:ENSP00000353552|uniprotkb:Q07244|uniprotkb:Q15671|uniprotkb:Q59F98|uniprotkb:Q60577|uniprotkb:Q922Y7|uniprotkb:Q96J62|uniprotkb:Q5T6W4|intact:EBI-3440248|uniprotkb:Q6IBN1 intact:EBI-954272|ensembl:ENSP00000311747|uniprotkb:O75932|uniprotkb:Q53GV1|uniprotkb:Q68DQ9|uniprotkb:Q96PK5|uniprotkb:B3KMN4|uniprotkb:Q2PYN1|uniprotkb:D6RGD8|uniprotkb:B0LM41|intact:EBI-16430855|intact:EBI-16472484 psi-mi:hnrpk_human(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:rbm14_human(display_long)|uniprotkb:RNA-binding motif protein 14(gene name synonym)|uniprotkb:RRM-containing coactivator activator/modulator(gene name synonym)|uniprotkb:Synaptotagmin-interacting protein(gene name synonym)|uniprotkb:RBM14(gene name)|psi-mi:RBM14(display_short)|uniprotkb:SIP(gene name synonym)|uniprotkb:Paraspeckle protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472535 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|go:"GO:0010988"(regulation of low-density lipoprotein particle clearance)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0042802"(identical protein binding)|ensembl:ENST00000351839(transcript)|ensembl:ENST00000360384(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000785"(chromatin)|go:"GO:0002102"(podosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006396"(RNA processing)|go:"GO:0007165"(signal transduction)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0042995"(cell projection)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1902165"(regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:1905599"(positive regulation of low-density lipoprotein receptor activity)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012987(ROK, N-terminal)|interpro:IPR033090|interpro:IPR036612|mint:P61978|rcsb pdb:1J5K|rcsb pdb:1KHM|rcsb pdb:1ZZI|rcsb pdb:1ZZJ|go:"GO:0043066"(negative regulation of apoptotic process)|reactome:R-HSA-4570464|reactome:R-HSA-72163|reactome:R-HSA-72203|reactome:R-HSA-9610379|rcsb pdb:1ZZK|refseq:NP_002131.2|refseq:NP_112552.1|refseq:NP_112553.1|ensembl:ENSP00000317788|ensembl:ENSP00000353552|ensembl:ENST00000376263|ensembl:ENSP00000365439|ensembl:ENST00000376281|ensembl:ENSP00000365458|refseq:NP_001305115.1|refseq:NP_001305116.1|refseq:NP_001305117.1|refseq:XP_016870157.1|refseq:XP_005252017.1|refseq:XP_005252020.1|refseq:XP_005252022.1|dip:DIP-31805N|entrezgene/locuslink:3190(identity) ensembl:ENSG00000239306(gene)|ensembl:ENST00000310137(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009725"(response to hormone)|go:"GO:0016575"(histone deacetylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034506|interpro:IPR034507|go:"GO:0098534"(centriole assembly)|interpro:IPR035979|mint:Q96PK6|rcsb pdb:2DNP|reactome:R-HSA-8941326|refseq:NP_001185765.1|refseq:NP_006319.1|ensembl:ENSP00000311747|ensembl:ENST00000393979|ensembl:ENSP00000377548|ensembl:ENST00000409738|ensembl:ENSP00000386995|refseq:NP_001185766.1|refseq:NP_001185774.1|dip:DIP-50126N|entrezgene/locuslink:10432(identity) intact:EBI-16438860(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:YZQD5JJkHPUMtZ4XUA9fQkNfXzc9606 rogid:Q0UBl2qmfwQTPwUQ7ZDwGIMOYoA9606 rigid:fa6T4f9JDRgzDWRZ/khZMqSSRMo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978-2 uniprotkb:Q96PK6 intact:EBI-7060731|ensembl:ENSP00000365439|ensembl:ENSP00000365458|uniprotkb:Q07244-2|intact:MINT-225449 intact:EBI-954272|ensembl:ENSP00000311747|uniprotkb:O75932|uniprotkb:Q53GV1|uniprotkb:Q68DQ9|uniprotkb:Q96PK5|uniprotkb:B3KMN4|uniprotkb:Q2PYN1|uniprotkb:D6RGD8|uniprotkb:B0LM41|intact:EBI-16430855|intact:EBI-16472484 psi-mi:p61978-2(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:rbm14_human(display_long)|uniprotkb:RNA-binding motif protein 14(gene name synonym)|uniprotkb:RRM-containing coactivator activator/modulator(gene name synonym)|uniprotkb:Synaptotagmin-interacting protein(gene name synonym)|uniprotkb:RBM14(gene name)|psi-mi:RBM14(display_short)|uniprotkb:SIP(gene name synonym)|uniprotkb:Paraspeckle protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472519 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|ensembl:ENST00000376263(transcript)|ensembl:ENST00000376281(transcript)|intact:EBI-304185(isoform-parent)|uniprotkb:P61978-2(isoform-parent)|entrezgene/locuslink:3190(identity) ensembl:ENSG00000239306(gene)|ensembl:ENST00000310137(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009725"(response to hormone)|go:"GO:0016575"(histone deacetylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034506|interpro:IPR034507|go:"GO:0098534"(centriole assembly)|interpro:IPR035979|mint:Q96PK6|rcsb pdb:2DNP|reactome:R-HSA-8941326|refseq:NP_001185765.1|refseq:NP_006319.1|ensembl:ENSP00000311747|ensembl:ENST00000393979|ensembl:ENSP00000377548|ensembl:ENST00000409738|ensembl:ENSP00000386995|refseq:NP_001185766.1|refseq:NP_001185774.1|dip:DIP-50126N|entrezgene/locuslink:10432(identity) intact:EBI-16434788(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:FX/iS2YfOhD0ntY2oqpOUetACqg9606 rogid:Q0UBl2qmfwQTPwUQ7ZDwGIMOYoA9606 rigid:3KhOScmBqaMU84aGSRt2Vsb7oNQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978-2 uniprotkb:Q96PK6 intact:EBI-7060731|ensembl:ENSP00000365439|ensembl:ENSP00000365458|uniprotkb:Q07244-2|intact:MINT-225449 intact:EBI-954272|ensembl:ENSP00000311747|uniprotkb:O75932|uniprotkb:Q53GV1|uniprotkb:Q68DQ9|uniprotkb:Q96PK5|uniprotkb:B3KMN4|uniprotkb:Q2PYN1|uniprotkb:D6RGD8|uniprotkb:B0LM41|intact:EBI-16430855|intact:EBI-16472484 psi-mi:p61978-2(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:rbm14_human(display_long)|uniprotkb:RNA-binding motif protein 14(gene name synonym)|uniprotkb:RRM-containing coactivator activator/modulator(gene name synonym)|uniprotkb:Synaptotagmin-interacting protein(gene name synonym)|uniprotkb:RBM14(gene name)|psi-mi:RBM14(display_short)|uniprotkb:SIP(gene name synonym)|uniprotkb:Paraspeckle protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472503 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|ensembl:ENST00000376263(transcript)|ensembl:ENST00000376281(transcript)|intact:EBI-304185(isoform-parent)|uniprotkb:P61978-2(isoform-parent)|entrezgene/locuslink:3190(identity) ensembl:ENSG00000239306(gene)|ensembl:ENST00000310137(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009725"(response to hormone)|go:"GO:0016575"(histone deacetylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034506|interpro:IPR034507|go:"GO:0098534"(centriole assembly)|interpro:IPR035979|mint:Q96PK6|rcsb pdb:2DNP|reactome:R-HSA-8941326|refseq:NP_001185765.1|refseq:NP_006319.1|ensembl:ENSP00000311747|ensembl:ENST00000393979|ensembl:ENSP00000377548|ensembl:ENST00000409738|ensembl:ENSP00000386995|refseq:NP_001185766.1|refseq:NP_001185774.1|dip:DIP-50126N|entrezgene/locuslink:10432(identity) intact:EBI-16434788(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:FX/iS2YfOhD0ntY2oqpOUetACqg9606 rogid:Q0UBl2qmfwQTPwUQ7ZDwGIMOYoA9606 rigid:3KhOScmBqaMU84aGSRt2Vsb7oNQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUI8 uniprotkb:Q96PK6 intact:EBI-2872414|ensembl:ENSP00000318804|uniprotkb:Q2MLY7|uniprotkb:A6NJF3|uniprotkb:B2R8C3|uniprotkb:Q9Y6M8|uniprotkb:Q9UNI3 intact:EBI-954272|ensembl:ENSP00000311747|uniprotkb:O75932|uniprotkb:Q53GV1|uniprotkb:Q68DQ9|uniprotkb:Q96PK5|uniprotkb:B3KMN4|uniprotkb:Q2PYN1|uniprotkb:D6RGD8|uniprotkb:B0LM41|intact:EBI-16430855|intact:EBI-16472484 psi-mi:crlf3_human(display_long)|uniprotkb:CRLF3(gene name)|psi-mi:CRLF3(display_short)|uniprotkb:CRLM9(gene name synonym)|uniprotkb:CREME9(gene name synonym)|uniprotkb:CYTOR4(gene name synonym)|uniprotkb:P48(gene name synonym)|uniprotkb:Cytokine receptor-like molecule 9(gene name synonym)|uniprotkb:Cytokine receptor-related protein 4(gene name synonym)|uniprotkb:Type I cytokine receptor-like factor p48(gene name synonym) psi-mi:rbm14_human(display_long)|uniprotkb:RNA-binding motif protein 14(gene name synonym)|uniprotkb:RRM-containing coactivator activator/modulator(gene name synonym)|uniprotkb:Synaptotagmin-interacting protein(gene name synonym)|uniprotkb:RBM14(gene name)|psi-mi:RBM14(display_short)|uniprotkb:SIP(gene name synonym)|uniprotkb:Paraspeckle protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472487 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000176390(gene)|ensembl:ENST00000324238(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0042802"(identical protein binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046427"(positive regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036116|mint:Q8IUI8|refseq:NP_057070.3|entrezgene/locuslink:51379(identity) ensembl:ENSG00000239306(gene)|ensembl:ENST00000310137(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009725"(response to hormone)|go:"GO:0016575"(histone deacetylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034506|interpro:IPR034507|go:"GO:0098534"(centriole assembly)|interpro:IPR035979|mint:Q96PK6|rcsb pdb:2DNP|reactome:R-HSA-8941326|refseq:NP_001185765.1|refseq:NP_006319.1|ensembl:ENSP00000311747|ensembl:ENST00000393979|ensembl:ENSP00000377548|ensembl:ENST00000409738|ensembl:ENSP00000386995|refseq:NP_001185766.1|refseq:NP_001185774.1|dip:DIP-50126N|entrezgene/locuslink:10432(identity) intact:EBI-16430857(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/20 rogid:iUxgX/ff546WqMhszXxotEhEZ3c9606 rogid:Q0UBl2qmfwQTPwUQ7ZDwGIMOYoA9606 rigid:H5kn/JCSrCdjmf1C41W93OtKoyw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUI8 uniprotkb:Q96PK6 intact:EBI-2872414|ensembl:ENSP00000318804|uniprotkb:Q2MLY7|uniprotkb:A6NJF3|uniprotkb:B2R8C3|uniprotkb:Q9Y6M8|uniprotkb:Q9UNI3 intact:EBI-954272|ensembl:ENSP00000311747|uniprotkb:O75932|uniprotkb:Q53GV1|uniprotkb:Q68DQ9|uniprotkb:Q96PK5|uniprotkb:B3KMN4|uniprotkb:Q2PYN1|uniprotkb:D6RGD8|uniprotkb:B0LM41|intact:EBI-16430855|intact:EBI-16472484 psi-mi:crlf3_human(display_long)|uniprotkb:CRLF3(gene name)|psi-mi:CRLF3(display_short)|uniprotkb:CRLM9(gene name synonym)|uniprotkb:CREME9(gene name synonym)|uniprotkb:CYTOR4(gene name synonym)|uniprotkb:P48(gene name synonym)|uniprotkb:Cytokine receptor-like molecule 9(gene name synonym)|uniprotkb:Cytokine receptor-related protein 4(gene name synonym)|uniprotkb:Type I cytokine receptor-like factor p48(gene name synonym) psi-mi:rbm14_human(display_long)|uniprotkb:RNA-binding motif protein 14(gene name synonym)|uniprotkb:RRM-containing coactivator activator/modulator(gene name synonym)|uniprotkb:Synaptotagmin-interacting protein(gene name synonym)|uniprotkb:RBM14(gene name)|psi-mi:RBM14(display_short)|uniprotkb:SIP(gene name synonym)|uniprotkb:Paraspeckle protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472468 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000176390(gene)|ensembl:ENST00000324238(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0030308"(negative regulation of cell growth)|go:"GO:0042802"(identical protein binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046427"(positive regulation of receptor signaling pathway via JAK-STAT)|go:"GO:0051726"(regulation of cell cycle)|interpro:IPR003961(Fibronectin, type III)|interpro:IPR013783(Immunoglobulin-like fold)|interpro:IPR036116|mint:Q8IUI8|refseq:NP_057070.3|entrezgene/locuslink:51379(identity) ensembl:ENSG00000239306(gene)|ensembl:ENST00000310137(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0002218"(activation of innate immune response)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009725"(response to hormone)|go:"GO:0016575"(histone deacetylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0045087"(innate immune response)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0060395"(SMAD protein signal transduction)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034506|interpro:IPR034507|go:"GO:0098534"(centriole assembly)|interpro:IPR035979|mint:Q96PK6|rcsb pdb:2DNP|reactome:R-HSA-8941326|refseq:NP_001185765.1|refseq:NP_006319.1|ensembl:ENSP00000311747|ensembl:ENST00000393979|ensembl:ENSP00000377548|ensembl:ENST00000409738|ensembl:ENSP00000386995|refseq:NP_001185766.1|refseq:NP_001185774.1|dip:DIP-50126N|entrezgene/locuslink:10432(identity) intact:EBI-16430857(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:iUxgX/ff546WqMhszXxotEhEZ3c9606 rogid:Q0UBl2qmfwQTPwUQ7ZDwGIMOYoA9606 rigid:H5kn/JCSrCdjmf1C41W93OtKoyw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P05783 uniprotkb:Q9H939-2 intact:EBI-297888|uniprotkb:Q53G38|uniprotkb:Q5U0N8|uniprotkb:Q9BW26|ensembl:ENSP00000373487|ensembl:ENSP00000373489 intact:EBI-16472446|ensembl:ENSP00000468622 psi-mi:k1c18_human(display_long)|uniprotkb:KRT18(gene name)|psi-mi:KRT18(display_short)|uniprotkb:CYK18(gene name synonym)|uniprotkb:Keratin-18(gene name synonym)|uniprotkb:PIG46(orf name)|uniprotkb:Cytokeratin-18(gene name synonym)|uniprotkb:Cell proliferation-inducing gene 46 protein(gene name synonym) psi-mi:q9h939-2(display_long)|uniprotkb:PSTPIP2(gene name)|psi-mi:PSTPIP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472452 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005815"(microtubule organizing center)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0005912"(adherens junction)|go:"GO:0007049"(cell cycle)|go:"GO:0009653"(anatomical structure morphogenesis)|go:"GO:0009750"(response to fructose)|go:"GO:0009897"(external side of plasma membrane)|go:"GO:0031667"(response to nutrient levels)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034451"(centriolar satellite)|go:"GO:0043000"(Golgi to plasma membrane CFTR protein transport)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045095"(keratin filament)|go:"GO:0045104"(intermediate filament cytoskeleton organization)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070365"(hepatocyte differentiation)|go:"GO:0072497"(mesenchymal stem cell differentiation)|go:"GO:0097110"(scaffold protein binding)|go:"GO:0097191"(extrinsic apoptotic signaling pathway)|go:"GO:0097284"(hepatocyte apoptotic process)|go:"GO:0098641"(cadherin binding involved in cell-cell adhesion)|go:"GO:1902488"(cholangiocyte apoptotic process)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR027695|interpro:IPR039008|mint:P05783|reactome:R-HSA-6805567|reactome:R-HSA-6809371|ensembl:ENSG00000111057(gene)|ensembl:ENST00000388835(transcript)|ensembl:ENST00000388837(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005198"(structural molecule activity)|refseq:NP_000215.1|refseq:NP_954657.1|dip:DIP-633N|entrezgene/locuslink:3875(identity) ensembl:ENSG00000152229(gene)|ensembl:ENST00000589328(transcript)|intact:EBI-2609610(isoform-parent)|entrezgene/locuslink:9050(identity) intact:EBI-16437711(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:6rtLZxuG0CSGcsCHEmkRKFVDeyo9606 rogid:RH1ReONZZRaeyckEt4RrJM7+Y6o9606 rigid:Z6T8ysweiEL3Fm5Rve8vetolld0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NTZ6 uniprotkb:P55345-4 intact:EBI-310707|uniprotkb:E1P5R6|uniprotkb:B3KRU2|uniprotkb:O94865|uniprotkb:Q8N3B1|uniprotkb:Q9H196|ensembl:ENSP00000352668|ensembl:ENSP00000363217|ensembl:ENSP00000363228 intact:EBI-16472326|ensembl:ENSP00000411984 psi-mi:rbm12_human(display_long)|uniprotkb:HRIHFB2091(orf name)|uniprotkb:RBM12(gene name)|psi-mi:RBM12(display_short)|uniprotkb:KIAA0765(gene name synonym)|uniprotkb:RNA-binding motif protein 12(gene name synonym)|uniprotkb:SH3/WW domain anchor protein in the nucleus(gene name synonym) psi-mi:p55345-4(display_long)|uniprotkb:Histone-arginine N-methyltransferase PRMT2(gene name synonym)|uniprotkb:PRMT2(gene name)|psi-mi:PRMT2(display_short)|uniprotkb:HMT1(gene name synonym)|uniprotkb:HRMT1L1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472426 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001185767.1|refseq:NP_001185769.1|refseq:NP_006038.2|refseq:NP_690051.1|ensembl:ENSG00000244462(gene)|ensembl:ENST00000359646(transcript)|ensembl:ENST00000374104(transcript)|ensembl:ENST00000374114(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0043484"(regulation of RNA splicing)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034591|interpro:IPR034594|interpro:IPR034854|interpro:IPR034855|interpro:IPR034856|interpro:IPR035979|mint:Q9NTZ6|rcsb pdb:1WEL|rcsb pdb:2CPY|rcsb pdb:2DNN|rcsb pdb:2EK1|rcsb pdb:2EK6|entrezgene/locuslink:10137(identity) ensembl:ENSG00000160310(gene)|ensembl:ENST00000451211(transcript)|intact:EBI-78458(isoform-parent)|entrezgene/locuslink:3275(identity) intact:EBI-16437870(see-also)|intact:EBI-16437880(see-also) - isoform-comment:Higher expression in breast cancer tissues. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Hcz7OUumWYuRnRNMjwFYUZBquVo9606 rogid:s+e1GGHPoCi3o58rrtF923d2mos9606 rigid:XgfZ/RRHPs7PoKp4qJMnC8ihfRY true - sufficient binding region:1-286 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYN7 uniprotkb:P55345-4 intact:EBI-9089622|uniprotkb:Q5JXM8|uniprotkb:B7ZM09|uniprotkb:B2RXE5|uniprotkb:Q96ST5|uniprotkb:A2RUF4|ensembl:ENSP00000364346 intact:EBI-16472326|ensembl:ENSP00000411984 psi-mi:zn341_human(display_long)|uniprotkb:ZNF341(gene name)|psi-mi:ZNF341(display_short) psi-mi:p55345-4(display_long)|uniprotkb:Histone-arginine N-methyltransferase PRMT2(gene name synonym)|uniprotkb:PRMT2(gene name)|psi-mi:PRMT2(display_short)|uniprotkb:HMT1(gene name synonym)|uniprotkb:HRMT1L1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472407 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001269862.1|refseq:NP_001269864.1|refseq:NP_116208.3|ensembl:ENSG00000131061(gene)|ensembl:ENST00000375200(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|entrezgene/locuslink:84905(identity) ensembl:ENSG00000160310(gene)|ensembl:ENST00000451211(transcript)|intact:EBI-78458(isoform-parent)|entrezgene/locuslink:3275(identity) intact:EBI-16436358(see-also) - isoform-comment:Higher expression in breast cancer tissues. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dEc17LamYWGrumF7ngc3Ayq4Q5E9606 rogid:s+e1GGHPoCi3o58rrtF923d2mos9606 rigid:oI6V8T9YE+aB+BUPjd/6KuACB4o true - sufficient binding region:1-286 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYN7-2 uniprotkb:P55345-4 intact:EBI-16435478|ensembl:ENSP00000344308 intact:EBI-16472326|ensembl:ENSP00000411984 psi-mi:q9byn7-2(display_long)|uniprotkb:ZNF341(gene name)|psi-mi:ZNF341(display_short) psi-mi:p55345-4(display_long)|uniprotkb:Histone-arginine N-methyltransferase PRMT2(gene name synonym)|uniprotkb:PRMT2(gene name)|psi-mi:PRMT2(display_short)|uniprotkb:HMT1(gene name synonym)|uniprotkb:HRMT1L1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472388 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-9089622(isoform-parent)|uniprotkb:Q9BYN7-2(isoform-parent)|ensembl:ENSG00000131061(gene)|ensembl:ENST00000342427(transcript)|entrezgene/locuslink:84905(identity) ensembl:ENSG00000160310(gene)|ensembl:ENST00000451211(transcript)|intact:EBI-78458(isoform-parent)|entrezgene/locuslink:3275(identity) intact:EBI-16435483(see-also) isoform-comment:Gene prediction based on EST data. isoform-comment:Higher expression in breast cancer tissues. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7vGJ+B6pyJ7Sog6LMmkaucXK7wI9606 rogid:s+e1GGHPoCi3o58rrtF923d2mos9606 rigid:YWgJMZcF6cB9o7e4GjZbzfphqgk true - sufficient binding region:1-286 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13191 intact:EBI-16429374 intact:EBI-744027|uniprotkb:Q63Z43|uniprotkb:A8K9S7|uniprotkb:Q13192|uniprotkb:Q13193|uniprotkb:Q3LIC0|uniprotkb:Q8IVC5|uniprotkb:B7WNM4|intact:EBI-28969458|ensembl:ENSP00000377598|intact:EBI-8051403|intact:MINT-7907019 - psi-mi:cblb_human(display_long)|uniprotkb:Signal transduction protein CBL-B(gene name synonym)|uniprotkb:SH3-binding protein CBL-B(gene name synonym)|uniprotkb:Casitas B-lineage lymphoma proto-oncogene b(gene name synonym)|uniprotkb:RING finger protein 56(gene name synonym)|uniprotkb:CBLB(gene name)|psi-mi:CBLB(display_short)|uniprotkb:RNF56(gene name synonym)|uniprotkb:Nbla00127(orf name)|uniprotkb:RING-type E3 ubiquitin transferase CBL-B(gene name synonym) psi-mi:"ccsb isoform id: prmt2_3"(display_short)|psi-mi:EBI-16429374(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472372 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_733762.2|refseq:NP_001308717.1|ensembl:ENSP00000377598|ensembl:ENST00000403724|ensembl:ENSP00000384816|ensembl:ENST00000405772|ensembl:ENSP00000384938|refseq:XP_011511559.1|ensembl:ENSG00000114423(gene)|ensembl:ENST00000394030(transcript)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0002669"(positive regulation of T cell anergy)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006955"(immune response)|go:"GO:0007165"(signal transduction)|go:"GO:0007175"(negative regulation of epidermal growth factor-activated receptor activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018193"(peptidyl-amino acid modification)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0005829"(cytosol)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042110"(T cell activation)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0046642"(negative regulation of alpha-beta T cell proliferation)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0050860"(negative regulation of T cell receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:2000583"(regulation of platelet-derived growth factor receptor-alpha signaling pathway)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003153(Adaptor protein Cbl, N-terminal helical)|interpro:IPR011992(EF-Hand type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR014742(Adaptor protein Cbl, SH2-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR017907|interpro:IPR024159|interpro:IPR024162|interpro:IPR036537|interpro:IPR036860|interpro:IPR039520|mint:Q13191|rcsb pdb:2AK5|rcsb pdb:2BZ8|rcsb pdb:2DO6|rcsb pdb:2J6F|rcsb pdb:2JNH|rcsb pdb:2LDR|rcsb pdb:2OOA|rcsb pdb:2OOB|rcsb pdb:3PFV|rcsb pdb:3VGO|rcsb pdb:3ZNI|reactome:R-HSA-983168|interpro:IPR014741(Adaptor protein Cbl, EF hand-like)|dip:DIP-33091N|entrezgene/locuslink:868(identity) entrezgene/locuslink:3275(identity) intact:EBI-16432622(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:cJ5eLH0TMyM6OtmS1sM3rhsrsIk9606 rogid:OAAEKxGVtSlipjL4kONluFkiFFg9606 rigid:EtjRioy0w8WnVMUnPX01HgGZl5w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13191 uniprotkb:P55345-4 intact:EBI-744027|uniprotkb:Q63Z43|uniprotkb:A8K9S7|uniprotkb:Q13192|uniprotkb:Q13193|uniprotkb:Q3LIC0|uniprotkb:Q8IVC5|uniprotkb:B7WNM4|intact:EBI-28969458|ensembl:ENSP00000377598|intact:EBI-8051403|intact:MINT-7907019 intact:EBI-16472326|ensembl:ENSP00000411984 psi-mi:cblb_human(display_long)|uniprotkb:Signal transduction protein CBL-B(gene name synonym)|uniprotkb:SH3-binding protein CBL-B(gene name synonym)|uniprotkb:Casitas B-lineage lymphoma proto-oncogene b(gene name synonym)|uniprotkb:RING finger protein 56(gene name synonym)|uniprotkb:CBLB(gene name)|psi-mi:CBLB(display_short)|uniprotkb:RNF56(gene name synonym)|uniprotkb:Nbla00127(orf name)|uniprotkb:RING-type E3 ubiquitin transferase CBL-B(gene name synonym) psi-mi:p55345-4(display_long)|uniprotkb:Histone-arginine N-methyltransferase PRMT2(gene name synonym)|uniprotkb:PRMT2(gene name)|psi-mi:PRMT2(display_short)|uniprotkb:HMT1(gene name synonym)|uniprotkb:HRMT1L1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472353 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_733762.2|refseq:NP_001308717.1|ensembl:ENSP00000377598|ensembl:ENST00000403724|ensembl:ENSP00000384816|ensembl:ENST00000405772|ensembl:ENSP00000384938|refseq:XP_011511559.1|ensembl:ENSG00000114423(gene)|ensembl:ENST00000394030(transcript)|go:"GO:0001784"(phosphotyrosine residue binding)|go:"GO:0002669"(positive regulation of T cell anergy)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006955"(immune response)|go:"GO:0007165"(signal transduction)|go:"GO:0007175"(negative regulation of epidermal growth factor-activated receptor activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0018193"(peptidyl-amino acid modification)|go:"GO:0030971"(receptor tyrosine kinase binding)|go:"GO:0031398"(positive regulation of protein ubiquitination)|go:"GO:0005829"(cytosol)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042110"(T cell activation)|go:"GO:0043087"(regulation of GTPase activity)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0045121"(membrane raft)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0046642"(negative regulation of alpha-beta T cell proliferation)|go:"GO:0050852"(T cell receptor signaling pathway)|go:"GO:0050860"(negative regulation of T cell receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:2000583"(regulation of platelet-derived growth factor receptor-alpha signaling pathway)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003153(Adaptor protein Cbl, N-terminal helical)|interpro:IPR011992(EF-Hand type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR014742(Adaptor protein Cbl, SH2-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR017907|interpro:IPR024159|interpro:IPR024162|interpro:IPR036537|interpro:IPR036860|interpro:IPR039520|mint:Q13191|rcsb pdb:2AK5|rcsb pdb:2BZ8|rcsb pdb:2DO6|rcsb pdb:2J6F|rcsb pdb:2JNH|rcsb pdb:2LDR|rcsb pdb:2OOA|rcsb pdb:2OOB|rcsb pdb:3PFV|rcsb pdb:3VGO|rcsb pdb:3ZNI|reactome:R-HSA-983168|interpro:IPR014741(Adaptor protein Cbl, EF hand-like)|dip:DIP-33091N|entrezgene/locuslink:868(identity) ensembl:ENSG00000160310(gene)|ensembl:ENST00000451211(transcript)|intact:EBI-78458(isoform-parent)|entrezgene/locuslink:3275(identity) intact:EBI-16432622(see-also) - isoform-comment:Higher expression in breast cancer tissues. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:cJ5eLH0TMyM6OtmS1sM3rhsrsIk9606 rogid:s+e1GGHPoCi3o58rrtF923d2mos9606 rigid:O/0EvqF3PUmC9iQkzv6Bal0w+KM true - sufficient binding region:1-286 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00401 uniprotkb:P55345-4 intact:EBI-957615|ensembl:ENSP00000223023|uniprotkb:Q7Z746|uniprotkb:A1JUI9 intact:EBI-16472326|ensembl:ENSP00000411984 psi-mi:wasl_human(display_long)|uniprotkb:WASL(gene name)|psi-mi:WASL(display_short) psi-mi:p55345-4(display_long)|uniprotkb:Histone-arginine N-methyltransferase PRMT2(gene name synonym)|uniprotkb:PRMT2(gene name)|psi-mi:PRMT2(display_short)|uniprotkb:HMT1(gene name synonym)|uniprotkb:HRMT1L1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472334 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006900"(vesicle budding from membrane)|go:"GO:0008154"(actin polymerization or depolymerization)|go:"GO:0009617"(response to bacterium)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0016050"(vesicle organization)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0030048"(actin filament-based movement)|go:"GO:0030050"(vesicle transport along actin filament)|go:"GO:0030478"(actin cap)|go:"GO:0030666"(endocytic vesicle membrane)|go:"GO:0030695"(GTPase regulator activity)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0034629"|rcsb pdb:2FF3|rcsb pdb:2LNH|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:2VCP|rcsb pdb:4CC2|rcsb pdb:4CC7|reactome:R-HSA-2029482|reactome:R-HSA-203641|reactome:R-HSA-373753|reactome:R-HSA-3928662|reactome:R-HSA-418885|reactome:R-HSA-5663213|reactome:R-HSA-8856828|reactome:R-HSA-9013148|reactome:R-HSA-9013149|reactome:R-HSA-9013406|reactome:R-HSA-9013409|reactome:R-HSA-9013424|reactome:R-HSA-9664422|ensembl:ENSG00000106299(gene)|ensembl:ENST00000223023(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0051301"(cell division)|go:"GO:0051491"(positive regulation of filopodium assembly)|go:"GO:0051653"(spindle localization)|go:"GO:0060997"(dendritic spine morphogenesis)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070062"(extracellular exosome)|go:"GO:1903526"(negative regulation of membrane tubulation)|go:"GO:2000370"(positive regulation of clathrin-dependent endocytosis)|go:"GO:2000402"(negative regulation of lymphocyte migration)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR000697(EVH1)|interpro:IPR003124(Actin-binding WH2)|interpro:IPR011026(Wiscott-Aldrich syndrome, C-terminal)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR030214|interpro:IPR033927|interpro:IPR036936|mint:O00401|go:"GO:0005634"(nucleus)|refseq:NP_003932.3|dip:DIP-29042N|entrezgene/locuslink:8976(identity) ensembl:ENSG00000160310(gene)|ensembl:ENST00000451211(transcript)|intact:EBI-78458(isoform-parent)|entrezgene/locuslink:3275(identity) intact:EBI-16429376(see-also) - isoform-comment:Higher expression in breast cancer tissues. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PinEPh47IRuCgiaJJZqStRhIAGQ9606 rogid:s+e1GGHPoCi3o58rrtF923d2mos9606 rigid:7b1WLlb2BvwvxA2JxNzrUQ9dI5I true - sufficient binding region:1-286 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NSC5 intact:EBI-16472306 intact:EBI-748420|uniprotkb:O14580|uniprotkb:O95350|uniprotkb:Q9NSB9|uniprotkb:Q9NSC0|intact:EBI-2557809|uniprotkb:E9PCW9|uniprotkb:Q9NSC1|intact:EBI-28972925|ensembl:ENSP00000376162|ensembl:ENSP00000439937|ensembl:ENSP00000446026|intact:EBI-10175777|uniprotkb:B2RA10 - psi-mi:home3_human(display_long)|uniprotkb:HOMER3(gene name)|psi-mi:HOMER3(display_short) psi-mi:"ccsb isoform id: prcc_2"(display_short)|psi-mi:EBI-16472306(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472309 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000221222|ensembl:ENSP00000221222|ensembl:ENSP00000376162|ensembl:ENST00000433218|ensembl:ENSP00000396154|ensembl:ENSP00000439937|ensembl:ENSP00000446026|ensembl:ENST00000594439|ensembl:ENSP00000471835|refseq:XP_006723006.1|refseq:XP_006723007.1|refseq:NP_001139193.1|refseq:NP_001139194.1|refseq:NP_004829.3|refseq:NP_001139196.1|ensembl:ENSG00000051128(gene)|ensembl:ENST00000392351(transcript)|ensembl:ENST00000539827(transcript)|ensembl:ENST00000542541(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006605"(protein targeting)|go:"GO:0007216"(G protein-coupled glutamate receptor signaling pathway)|go:"GO:0014069"(postsynaptic density)|go:"GO:0030425"(dendrite)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0035256"(G protein-coupled glutamate receptor binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0070885"(negative regulation of calcineurin-NFAT signaling cascade)|go:"GO:2001256"(regulation of store-operated calcium entry)|interpro:IPR000697(EVH1)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR044100|mint:Q9NSC5|rcsb pdb:2P8V|rcsb pdb:3CVF|reactome:R-HSA-6794361|entrezgene/locuslink:9454(identity) entrezgene/locuslink:5546(identity) intact:EBI-16438346(see-also)|intact:EBI-16438362(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:U1y/y52nnf7zQUCNQlqk7JDgXi49606 rogid:j9XRhH4ZEG79gSUCXnZokfMSv6E9606 rigid:0a5vrJ7qgMSW3cO+ihYPmNYiChY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:Q9Y252 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472771 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16437375(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:z4HqwWorXLwNu5gG2mw/NVyf/nU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P15884-3 uniprotkb:Q9Y252 intact:EBI-13636688|ensembl:ENSP00000346440|ensembl:ENSP00000486670 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:p15884-3(display_long)|uniprotkb:Class B basic helix-loop-helix protein 19(gene name synonym)|uniprotkb:Immunoglobulin transcription factor 2(gene name synonym)|uniprotkb:SL3-3 enhancer factor 2(gene name synonym)|uniprotkb:B+(isoform synonym)|uniprotkb:TCF4(gene name)|psi-mi:TCF4(display_short)|uniprotkb:BHLHB19(gene name synonym)|uniprotkb:ITF2(gene name synonym)|uniprotkb:SEF2(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472755 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-533224(isoform-parent)|ensembl:ENSG00000196628(gene)|ensembl:ENST00000354452(transcript)|ensembl:ENST00000629387(transcript)|uniprotkb:P15884-3(isoform-parent)|entrezgene/locuslink:6925(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16436891(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZNbTMfCK9F8zDtvfNHuHnQpJM7w9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:sG1I2ULJ6yENOLVLKQQpgkE9jic true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q63HR2 uniprotkb:Q9Y252 intact:EBI-949753|ensembl:ENSP00000319684|uniprotkb:A2VDF2|uniprotkb:A2VDF3|uniprotkb:A2VDI8|uniprotkb:Q2NL80|uniprotkb:Q76MW6|uniprotkb:Q7Z5T9|uniprotkb:Q8NFF9|uniprotkb:Q8NFG0|uniprotkb:Q96P25|uniprotkb:Q9NT29|uniprotkb:Q9UPS7|uniprotkb:A5PKY4 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:tns2_human(display_long)|uniprotkb:TNS2(gene name)|psi-mi:TNS2(display_short)|uniprotkb:C1 domain-containing phosphatase and tensin homolog(gene name synonym)|uniprotkb:KIAA1075(gene name synonym)|uniprotkb:TENC1(gene name synonym)|uniprotkb:Tensin-like C1 domain-containing phosphatase(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472736 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000314250(transcript)|go:"GO:0001822"(kidney development)|go:"GO:0004725"(protein tyrosine phosphatase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0014850"(response to muscle activity)|go:"GO:0019725"(cellular homeostasis)|go:"GO:0019900"(kinase binding)|go:"GO:0032963"(collagen metabolic process)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035335"(peptidyl-tyrosine dephosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046872"(metal ion binding)|go:"GO:0048871"(multicellular organismal homeostasis)|interpro:IPR000980(SH2 motif)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR006020(Phosphotyrosine interaction region)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013625(Tensin phosphotyrosine-binding domain)|interpro:IPR014020(C2 tensin-type)|interpro:IPR029021|interpro:IPR029023|interpro:IPR033929|interpro:IPR035012|interpro:IPR035892|interpro:IPR036860|mint:Q63HR2|rcsb pdb:2DKQ|rcsb pdb:2KNO|rcsb pdb:2L6K|rcsb pdb:2LOZ|rcsb pdb:3HQC|ensembl:ENSG00000111077(gene)|refseq:NP_056134.2|refseq:NP_736610.2|refseq:NP_938072.1|entrezgene/locuslink:23371(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16436693(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:uobqTi6g78V5Iib3uRGGhqjSt7o9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:3uSAK59lF8WFNAzRmUQ/fBz4584 true sufficient binding region:125-1409 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43865 uniprotkb:Q9Y252 intact:EBI-2371423|uniprotkb:Q2TAJ6|uniprotkb:Q502W8|uniprotkb:Q5VSM0|uniprotkb:Q6P171|uniprotkb:Q96PK4|uniprotkb:Q9UG84|uniprotkb:B4E168|ensembl:ENSP00000358814 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:sahh2_human(display_long)|uniprotkb:AHCYL1(gene name)|psi-mi:AHCYL1(display_short)|uniprotkb:DCAL(gene name synonym)|uniprotkb:XPVKONA(gene name synonym)|uniprotkb:S-adenosyl-L-homocysteine hydrolase 2(gene name synonym)|uniprotkb:DC-expressed AHCY-like molecule(gene name synonym)|uniprotkb:Putative adenosylhomocysteinase 2(gene name synonym)|uniprotkb:"IP(3)Rs binding protein released with IP(3)"(gene name synonym)|uniprotkb:IRBIT(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472720 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001229602.1|refseq:NP_001229603.1|refseq:NP_001229604.1|refseq:NP_001229605.1|refseq:NP_006612.2|ensembl:ENSG00000168710(gene)|ensembl:ENST00000369799(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0006611"(protein export from nucleus)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0010765"(positive regulation of sodium ion transport)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0031440"(regulation of mRNA 3'-end processing)|go:"GO:0032412"(regulation of ion transmembrane transporter activity)|go:"GO:0033353"(S-adenosylmethionine cycle)|go:"GO:0038166"(angiotensin-activated signaling pathway)|go:"GO:0042045"(epithelial fluid transport)|go:"GO:0042802"(identical protein binding)|go:"GO:0044070"(regulation of anion transport)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0051592"(response to calcium ion)|go:"GO:0070062"(extracellular exosome)|go:"GO:1990456"(mitochondrion-endoplasmic reticulum membrane tethering)|interpro:IPR000043(S-adenosyl-L-homocysteine hydrolase)|interpro:IPR015878(S-adenosyl-L-homocysteine hydrolase, NAD binding)|interpro:IPR020082|interpro:IPR036291|interpro:IPR042172|mint:O43865|rcsb pdb:3MTG|reactome:R-HSA-112043|reactome:R-HSA-1489509|reactome:R-HSA-2029485|reactome:R-HSA-2871809|reactome:R-HSA-422356|reactome:R-HSA-5218921|reactome:R-HSA-5578775|reactome:R-HSA-5607763|reactome:R-HSA-9664323|reactome:R-HSA-983695|entrezgene/locuslink:10768(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16436468(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:uwZ+P9SdKadoVn01p/b8qHp6egk9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:PgrpiW1OCByu9NHS6FKoylD/I04 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 uniprotkb:Q9Y252 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472704 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16432268(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:vxetvP2lyRMxdj6+r1ZcYeYMfSQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NUQ1 uniprotkb:Q9Y252 intact:EBI-726876|uniprotkb:Q75MG9|uniprotkb:Q75MH0|uniprotkb:Q96IW8|uniprotkb:Q9H229|uniprotkb:Q9HAD9|intact:EBI-28981798|ensembl:ENSP00000257700 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:rint1_human(display_long)|uniprotkb:RAD50 interactor 1(gene name synonym)|uniprotkb:RINT1(gene name)|psi-mi:RINT1(display_short) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472688 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135249(gene)|ensembl:ENST00000257700(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007095"(mitotic G2 DNA damage checkpoint signaling)|go:"GO:0015031"(protein transport)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:0070939"(Dsl1/NZR complex)|interpro:IPR007528(RINT-1/TIP-1)|interpro:IPR042044|reactome:R-HSA-6811434|refseq:NP_068749.3|ensembl:ENSP00000257700|dip:DIP-36477N|entrezgene/locuslink:60561(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16431645(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUzUSBI8f6ednxeVnP97ifOMoPc9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:1q8DgnV/tWtOKqV3mV+Dt8o+ZlE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UL42 uniprotkb:Q9Y252 intact:EBI-302355|uniprotkb:O94959|uniprotkb:O95145|uniprotkb:Q49A18|uniprotkb:Q9UL43|ensembl:ENSP00000429344|uniprotkb:B3KNY9 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:pnma2_human(display_long)|uniprotkb:PNMA2(gene name)|psi-mi:PNMA2(display_short)|uniprotkb:KIAA0883(gene name synonym)|uniprotkb:MA2(gene name synonym)|uniprotkb:Onconeuronal antigen Ma2(gene name synonym)|uniprotkb:Paraneoplastic neuronal antigen MM2(gene name synonym)|uniprotkb:40 kDa neuronal protein(gene name synonym) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472672 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009188.1|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026525|mint:Q9UL42|ensembl:ENSG00000240694(gene)|ensembl:ENST00000522362(transcript)|go:"GO:0005730"(nucleolus)|refseq:XP_011542667.1|entrezgene/locuslink:10687(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16431267(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GeMwoq69tYJJJc5lI0/bSAGlsCQ9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:uSCHHG1cINwFT94V5/XhfGR9HXA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TD10 uniprotkb:Q9Y252 intact:EBI-2548751|ensembl:ENSP00000333539|ensembl:ENSP00000379589|ensembl:ENSP00000444254|ensembl:ENSP00000506738|uniprotkb:Q7Z3J0|uniprotkb:Q8IV14|uniprotkb:D3DSA4 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:mipo1_human(display_long)|uniprotkb:MIPOL1(gene name)|psi-mi:MIPOL1(display_short) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472653 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000151338(gene)|ensembl:ENST00000327441(transcript)|ensembl:ENST00000396294(transcript)|ensembl:ENST00000537471(transcript)|ensembl:ENST00000684589(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0042802"(identical protein binding)|interpro:IPR026175|mint:Q8TD10|refseq:NP_001182225.1|refseq:NP_001182226.1|refseq:NP_620059.1|refseq:XP_016876492.1|refseq:XP_016876493.1|refseq:XP_016876494.1|entrezgene/locuslink:145282(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16430073(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:X4gY7nzDtnrS2yil7QhmLH968Ug9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:ovtR6kTbGzC+XWCuMyhRoRmPbzs true sufficient binding region:182-442 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 intact:EBI-16472634 intact:EBI-16439278 - psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:"ccsb isoform id: rnf40_2"(display_short)|psi-mi:EBI-16472634(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472637 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) entrezgene/locuslink:9810(identity) intact:EBI-16439693(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:c3Cz6BGjD9iUCGN9Dqytq3QCQZQ9606 rigid:fXEnWosXfBN6dNWtN7/WekbqMiA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435576 uniprotkb:Q13671-2 - intact:EBI-366034 psi-mi:"ccsb orf id: 53744"(display_short)|psi-mi:EBI-16435576(display_long) psi-mi:q13671-2(display_long)|uniprotkb:RIN1(gene name)|psi-mi:RIN1(display_short)|uniprotkb:Ras inhibitor JC99(gene name synonym)|uniprotkb:Ras interaction/interference protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472618 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:140258(identity) intact:EBI-366017(rin1_human)|entrezgene/locuslink:9610(identity) intact:EBI-16435578(see-also) - isoform-comment:Shows reduced ability to bind to Ras and 14-3-3 proteins. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:z0z+FcvFPqhBOHUsErdmi55IjpY9606 rogid:6g4wEXS1EKGBUMTrLAbbjPWsmZw9606 rigid:SU2IKHXFIaFeGS7yExue9rQWOxc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435576 uniprotkb:Q13671 - intact:EBI-366017|uniprotkb:O15010|uniprotkb:Q00427|uniprotkb:Q96CC8|ensembl:ENSP00000310406 psi-mi:"ccsb orf id: 53744"(display_short)|psi-mi:EBI-16435576(display_long) psi-mi:rin1_human(display_long)|uniprotkb:RIN1(gene name)|psi-mi:RIN1(display_short)|uniprotkb:Ras interaction/interference protein 1(gene name synonym)|uniprotkb:Ras inhibitor JC99(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472602 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:140258(identity) ensembl:ENSG00000174791(gene)|ensembl:ENST00000311320(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0007165"(signal transduction)|interpro:IPR000159(Ras-association)|interpro:IPR000980(SH2 motif)|interpro:IPR003123(Vacuolar sorting protein 9)|interpro:IPR036860|interpro:IPR037191|reactome:R-HSA-8876198|refseq:NP_004283.2|dip:DIP-117N|entrezgene/locuslink:9610(identity) intact:EBI-16435578(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:z0z+FcvFPqhBOHUsErdmi55IjpY9606 rogid:oj/ZbyM0Oqe0wDMlFbJHCtGzMwA9606 rigid:5MT0e4/X6I+9DYJieCkkvGjPJLU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRK4 intact:EBI-16435574 intact:EBI-741037|ensembl:ENSP00000359240|ensembl:ENSP00000359243|uniprotkb:Q8N3I0|uniprotkb:Q96J79|uniprotkb:Q96JL2|uniprotkb:B1AL14|uniprotkb:D3DR72 - psi-mi:lzts2_human(display_long)|uniprotkb:Protein LAPSER1(gene name synonym)|uniprotkb:LZTS2(gene name)|psi-mi:LZTS2(display_short)|uniprotkb:KIAA1813(gene name synonym)|uniprotkb:LAPSER1(gene name synonym) psi-mi:"ccsb isoform id: rin1_3"(display_short)|psi-mi:EBI-16435574(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472586 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_115805.1|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0031982"(vesicle)|go:"GO:0051013"(microtubule severing)|go:"GO:0051168"(nuclear export)|go:"GO:0051255"(spindle midzone assembly)|go:"GO:0060682"(primary ureteric bud growth)|go:"GO:0072197"(ureter morphogenesis)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|interpro:IPR028597|mint:Q9BRK4|ensembl:ENSG00000107816(gene)|ensembl:ENST00000370220(transcript)|ensembl:ENST00000370223(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|refseq:XP_016872269.1|refseq:NP_001305028.1|refseq:NP_001305029.1|refseq:NP_001305030.1|refseq:XP_005270279.1|entrezgene/locuslink:84445(identity) entrezgene/locuslink:9610(identity) intact:EBI-16430576(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OaMJmnmfm6JniKUJeyg7fS6zRcw9606 rogid:RW4Tn3lN56PIlLIZX5QTF7MoqSI9606 rigid:F0WfAz0iEC65wWmO6Z5NFCMkoRo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRK4 uniprotkb:Q13671-2 intact:EBI-741037|ensembl:ENSP00000359240|ensembl:ENSP00000359243|uniprotkb:Q8N3I0|uniprotkb:Q96J79|uniprotkb:Q96JL2|uniprotkb:B1AL14|uniprotkb:D3DR72 intact:EBI-366034 psi-mi:lzts2_human(display_long)|uniprotkb:Protein LAPSER1(gene name synonym)|uniprotkb:LZTS2(gene name)|psi-mi:LZTS2(display_short)|uniprotkb:KIAA1813(gene name synonym)|uniprotkb:LAPSER1(gene name synonym) psi-mi:q13671-2(display_long)|uniprotkb:RIN1(gene name)|psi-mi:RIN1(display_short)|uniprotkb:Ras inhibitor JC99(gene name synonym)|uniprotkb:Ras interaction/interference protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472570 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_115805.1|go:"GO:0016055"(Wnt signaling pathway)|go:"GO:0030496"(midbody)|go:"GO:0031982"(vesicle)|go:"GO:0051013"(microtubule severing)|go:"GO:0051168"(nuclear export)|go:"GO:0051255"(spindle midzone assembly)|go:"GO:0060682"(primary ureteric bud growth)|go:"GO:0072197"(ureter morphogenesis)|go:"GO:0090090"(negative regulation of canonical Wnt signaling pathway)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|interpro:IPR028597|mint:Q9BRK4|ensembl:ENSG00000107816(gene)|ensembl:ENST00000370220(transcript)|ensembl:ENST00000370223(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0005874"(microtubule)|go:"GO:0005886"(plasma membrane)|go:"GO:0008285"(negative regulation of cell population proliferation)|refseq:XP_016872269.1|refseq:NP_001305028.1|refseq:NP_001305029.1|refseq:NP_001305030.1|refseq:XP_005270279.1|entrezgene/locuslink:84445(identity) intact:EBI-366017(rin1_human)|entrezgene/locuslink:9610(identity) intact:EBI-16430576(see-also) - isoform-comment:Shows reduced ability to bind to Ras and 14-3-3 proteins. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:OaMJmnmfm6JniKUJeyg7fS6zRcw9606 rogid:6g4wEXS1EKGBUMTrLAbbjPWsmZw9606 rigid:G7+Vl1dIbtY5woNwEVB3hDbghUY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P50221 uniprotkb:P52756 intact:EBI-2864512|uniprotkb:A8K524|uniprotkb:Q15069|uniprotkb:A8MWF9|ensembl:ENSP00000321684 intact:EBI-714003|uniprotkb:Q93021|uniprotkb:Q9BU14|uniprotkb:Q9UKY8|uniprotkb:Q9UL24|ensembl:ENSP00000343054|uniprotkb:B2RA45|uniprotkb:B4DM16|uniprotkb:B4DMF9|uniprotkb:B4DZ63|uniprotkb:Q9HDA6|intact:EBI-16431417 psi-mi:meox1_human(display_long)|uniprotkb:MEOX1(gene name)|psi-mi:MEOX1(display_short)|uniprotkb:MOX1(gene name synonym)|uniprotkb:Mesenchyme homeobox 1(gene name synonym) psi-mi:rbm5_human(display_long)|uniprotkb:RNA-binding motif protein 5(gene name synonym)|uniprotkb:Putative tumor suppressor LUCA15(gene name synonym)|uniprotkb:Protein G15(gene name synonym)|uniprotkb:Renal carcinoma antigen NY-REN-9(gene name synonym)|uniprotkb:RBM5(gene name)|psi-mi:RBM5(display_short)|uniprotkb:H37(orf name)|uniprotkb:LUCA15(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472551 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035091.1|refseq:NP_004518.1|refseq:NP_054705.1|ensembl:ENSG00000005102(gene)|ensembl:ENST00000318579(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001757"(somite specification)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007275"(multicellular organism development)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0060218"(hematopoietic stem cell differentiation)|go:"GO:0061053"(somite development)|go:"GO:0061056"(sclerotome development)|go:"GO:0071837"(HMG box domain binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4222(identity) ensembl:ENSG00000003756(gene)|ensembl:ENST00000347869(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR033094|interpro:IPR034991|interpro:IPR034993|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0006396"(RNA processing)|go:"GO:0006915"(apoptotic process)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR000467(D111/G-patch)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036443|interpro:IPR041591|mint:P52756|rcsb pdb:2LK0|rcsb pdb:2LK1|rcsb pdb:2LKZ|rcsb pdb:5MF9|rcsb pdb:5MFY|reactome:R-HSA-72163|refseq:NP_005769.1|refseq:XP_016860992.1|dip:DIP-47277N|entrezgene/locuslink:10181(identity) intact:EBI-16431419(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:yBbzuzEOADdUkAmwCSLI6+yosC09606 rogid:LsPTpaKrGY2xtpYofHbFVXjSi/A9606 rigid:Z4fe4FjpH6sV3b5q4MwUIAn8ibM true - sufficient binding region:1-546 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:Q9Y252 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472834 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16438081(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:+1ryNgVk4q6063M6hCWnP0D29iU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:P23297 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-743686|uniprotkb:Q5T7Y3|uniprotkb:B2R5D9|ensembl:ENSP00000292169 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:s10a1_human(display_long)|uniprotkb:S100 calcium-binding protein A1(gene name synonym)|uniprotkb:S-100 protein subunit alpha(gene name synonym)|uniprotkb:S-100 protein alpha chain(gene name synonym)|uniprotkb:S100A1(gene name)|psi-mi:S100A1(display_short)|uniprotkb:S100A(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473636 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) refseq:NP_006262.1|ensembl:ENSG00000160678(gene)|ensembl:ENST00000292169(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0008016"(regulation of heart contraction)|go:"GO:0016529"(sarcoplasmic reticulum)|go:"GO:0021762"(substantia nigra development)|go:"GO:0030018"(Z disc)|go:"GO:0031430"(M band)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043005"(neuron projection)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0051000"(positive regulation of nitric-oxide synthase activity)|go:"GO:0051117"(ATPase binding)|go:"GO:1901387"(positive regulation of voltage-gated calcium channel activity)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR028486|mint:P23297|rcsb pdb:2L0P|rcsb pdb:2LHL|rcsb pdb:2LLS|rcsb pdb:2LLT|rcsb pdb:2LLU|rcsb pdb:2LP2|rcsb pdb:2LP3|rcsb pdb:2LUX|rcsb pdb:2M3W|rcsb pdb:5K89|reactome:R-HSA-1236974|reactome:R-HSA-166058|reactome:R-HSA-5602498|reactome:R-HSA-5603041|reactome:R-HSA-5686938|interpro:IPR018247|entrezgene/locuslink:6271(identity) intact:EBI-16435790(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:cELa51qDGFnYHPBnpUhMDGYPfOk9606 rigid:uoTkRbs7ghXmE55qKOGNhCpzmuw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:A0A0S2Z4M5 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-16436147 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473617 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16440776(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:jh27oDnUQKxs0Vy9E9v4HAMHGaI true sufficient binding region:32-313 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:P28702 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473598 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16440776(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:pvjQ5rxty4G2+HiWcuNGK4zwLJM true sufficient binding region:32-313 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q2TAC2-2 uniprotkb:A0A0S2Z4M5 intact:EBI-10961624|ensembl:ENSP00000376154 intact:EBI-16436147 psi-mi:q2tac2-2(display_long)|uniprotkb:CCDC57(gene name)|psi-mi:CCDC57(display_short) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473582 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000176155(gene)|ensembl:ENST00000392343(transcript)|uniprotkb:Q2TAC2-2(isoform-parent)|intact:EBI-2808286(isoform-parent)|entrezgene/locuslink:284001(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16440246(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RWcF0hgb1geIY959JUKrLK13Jx09606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:FPIzT2OQ0XZynyzI+Z6sVnMz41I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q2TAC2-2 uniprotkb:P28702 intact:EBI-10961624|ensembl:ENSP00000376154 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:q2tac2-2(display_long)|uniprotkb:CCDC57(gene name)|psi-mi:CCDC57(display_short) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473566 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000176155(gene)|ensembl:ENST00000392343(transcript)|uniprotkb:Q2TAC2-2(isoform-parent)|intact:EBI-2808286(isoform-parent)|entrezgene/locuslink:284001(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16440246(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RWcF0hgb1geIY959JUKrLK13Jx09606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:TDnp1Dh/4VhZE0wtAoxbgXMSrb0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:P28702 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473545 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16438564(see-also)|intact:EBI-16438576(see-also)|intact:EBI-16438588(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:Spwo90i0Ld+LLwwP0aq/5kexDUg true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75528 intact:EBI-16429002 intact:EBI-473249|uniprotkb:Q9UFS2|intact:EBI-28973289|ensembl:ENSP00000307684|ensembl:ENSP00000393471|uniprotkb:Q6FI83 - psi-mi:tada3_human(display_long)|uniprotkb:ADA3 homolog(gene name synonym)|uniprotkb:STAF54(gene name synonym)|uniprotkb:TADA3(gene name)|psi-mi:TADA3(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:TADA3L(gene name synonym)|uniprotkb:Transcriptional adapter 3-like(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473526 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000171148(gene)|ensembl:ENST00000301964(transcript)|ensembl:ENST00000440161(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030520"(intracellular estrogen receptor signaling pathway)|go:"GO:0030914"|go:"GO:0031063"(regulation of histone deacetylation)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0033276"(transcription factor TFTC complex)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090043"(regulation of tubulin deacetylation)|interpro:IPR019340|mint:O75528|reactome:R-HSA-3214847|reactome:R-HSA-5689880|ensembl:ENSP00000307684|ensembl:ENST00000343450|ensembl:ENSP00000343649|ensembl:ENSP00000393471|refseq:NP_006345.1|refseq:NP_597814.1|refseq:NP_001265199.1|entrezgene/locuslink:10474(identity) entrezgene/locuslink:6257(identity) intact:EBI-16437487(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:5NQkQiw+G/8uL2fjoMgW8+mTB8o9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:SWzNpDZAfZVLb+X0gEtmIZJuNiQ true sufficient binding region:1-369 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75528 uniprotkb:A0A0S2Z4M5 intact:EBI-473249|uniprotkb:Q9UFS2|intact:EBI-28973289|ensembl:ENSP00000307684|ensembl:ENSP00000393471|uniprotkb:Q6FI83 intact:EBI-16436147 psi-mi:tada3_human(display_long)|uniprotkb:ADA3 homolog(gene name synonym)|uniprotkb:STAF54(gene name synonym)|uniprotkb:TADA3(gene name)|psi-mi:TADA3(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:TADA3L(gene name synonym)|uniprotkb:Transcriptional adapter 3-like(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473507 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000171148(gene)|ensembl:ENST00000301964(transcript)|ensembl:ENST00000440161(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030520"(intracellular estrogen receptor signaling pathway)|go:"GO:0030914"|go:"GO:0031063"(regulation of histone deacetylation)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0033276"(transcription factor TFTC complex)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090043"(regulation of tubulin deacetylation)|interpro:IPR019340|mint:O75528|reactome:R-HSA-3214847|reactome:R-HSA-5689880|ensembl:ENSP00000307684|ensembl:ENST00000343450|ensembl:ENSP00000343649|ensembl:ENSP00000393471|refseq:NP_006345.1|refseq:NP_597814.1|refseq:NP_001265199.1|entrezgene/locuslink:10474(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16437487(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:5NQkQiw+G/8uL2fjoMgW8+mTB8o9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:E3+0nhwqTZfRp7+KTbyTGkYkGs0 true sufficient binding region:1-369 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75528 uniprotkb:P28702 intact:EBI-473249|uniprotkb:Q9UFS2|intact:EBI-28973289|ensembl:ENSP00000307684|ensembl:ENSP00000393471|uniprotkb:Q6FI83 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:tada3_human(display_long)|uniprotkb:ADA3 homolog(gene name synonym)|uniprotkb:STAF54(gene name synonym)|uniprotkb:TADA3(gene name)|psi-mi:TADA3(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:TADA3L(gene name synonym)|uniprotkb:Transcriptional adapter 3-like(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473488 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000171148(gene)|ensembl:ENST00000301964(transcript)|ensembl:ENST00000440161(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030374"(nuclear receptor coactivator activity)|go:"GO:0030520"(intracellular estrogen receptor signaling pathway)|go:"GO:0030914"|go:"GO:0031063"(regulation of histone deacetylation)|go:"GO:0031647"(regulation of protein stability)|go:"GO:0033276"(transcription factor TFTC complex)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090043"(regulation of tubulin deacetylation)|interpro:IPR019340|mint:O75528|reactome:R-HSA-3214847|reactome:R-HSA-5689880|ensembl:ENSP00000307684|ensembl:ENST00000343450|ensembl:ENSP00000343649|ensembl:ENSP00000393471|refseq:NP_006345.1|refseq:NP_597814.1|refseq:NP_001265199.1|entrezgene/locuslink:10474(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16437487(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:5NQkQiw+G/8uL2fjoMgW8+mTB8o9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:nLqJGLGUZLBB7TIqEA4y84A5WBc true sufficient binding region:1-369 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 intact:EBI-16429002 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 - psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473472 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) entrezgene/locuslink:6257(identity) intact:EBI-16437385(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:ZDB/qV1GOGb9d+JzT3ELg3BneZg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:A0A0S2Z4M5 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-16436147 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473456 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16437385(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:ut+BYEf5zg2MUBg+9+6JiZE6zsE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UBB9 uniprotkb:P28702 intact:EBI-1105213|uniprotkb:O95908|uniprotkb:Q5H8V8|uniprotkb:Q9UGV7|uniprotkb:Q9Y2Q8|ensembl:ENSP00000383892|ensembl:ENSP00000384297|ensembl:ENSP00000384421|ensembl:ENSP00000480171|ensembl:ENSP00000385861|uniprotkb:Q20WL0 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:tfp11_human(display_long)|uniprotkb:TFIP11(gene name)|psi-mi:TFIP11(display_short)|uniprotkb:HSPC006(orf name)|uniprotkb:STIP(gene name synonym)|uniprotkb:Septin and tuftelin-interacting protein 1(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473440 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000100109(gene)|refseq:NP_001008697.1|refseq:NP_036275.1|go:"GO:0016607"(nuclear speck)|ensembl:ENST00000405938(transcript)|ensembl:ENST00000407148(transcript)|ensembl:ENST00000407431(transcript)|ensembl:ENST00000407690(transcript)|ensembl:ENST00000619735(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006396"(RNA processing)|go:"GO:0031012"(extracellular matrix)|go:"GO:0031214"(biomineral tissue development)|go:"GO:0031333"(negative regulation of protein-containing complex assembly)|go:"GO:0031848"(protection from non-homologous end joining at telomere)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0071008"(U2-type post-mRNA release spliceosomal complex)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1904876"(negative regulation of DNA ligase activity)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000467(D111/G-patch)|interpro:IPR022159|interpro:IPR022783|interpro:IPR024933|mint:Q9UBB9|reactome:R-HSA-72163|refseq:XP_011528381.1|refseq:XP_016884224.1|refseq:NP_001333786.1|refseq:NP_001333787.1|refseq:NP_001333788.1|refseq:NP_001333790.1|entrezgene/locuslink:24144(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16437385(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Brk0v9dAoy5ntoJVHFsvt+FFE3g9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:D8Nto/SRm+viLYuc46jpPDZmq1A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q05BL1 uniprotkb:P28702 intact:EBI-11952721|intact:EBI-12700013 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:q05bl1_human(display_long)|uniprotkb:TP53BP2(gene name)|psi-mi:TP53BP2(display_short) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473423 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005737"(cytoplasm)|interpro:IPR001452(Src homology-3)|interpro:IPR002110(Ankyrin)|interpro:IPR020683|interpro:IPR036028|interpro:IPR036770|entrezgene/locuslink:7159(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16436408(see-also)|intact:EBI-16436418(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:LA1UvPUs8vUyy7hDTxjj8DevaY89606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:nRoiusv6Em8hw9MlOBP0Z8uhb0E true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96RI1-1 intact:EBI-16429002 intact:EBI-12417284|ensembl:ENSP00000376712|ensembl:ENSP00000496908 - psi-mi:q96ri1-1(display_long)|uniprotkb:NR1H4(gene name)|psi-mi:NR1H4(display_short)|uniprotkb:BAR(gene name synonym)|uniprotkb:FXR(gene name synonym)|uniprotkb:Farnesoid X-activated receptor(gene name synonym)|uniprotkb:Farnesol receptor HRR-1(gene name synonym)|uniprotkb:HRR1(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group H member 4(gene name synonym)|uniprotkb:RIP14(gene name synonym)|uniprotkb:FXRalpha1(isoform synonym)|uniprotkb:"FXRalpha1(+)"(isoform synonym)|uniprotkb:Retinoid X receptor-interacting protein 14(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473406 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1250177(isoform-parent)|uniprotkb:Q96RI1-1(isoform-parent)|ensembl:ENSG00000012504(gene)|ensembl:ENST00000392986(transcript)|ensembl:ENST00000648861(transcript)|entrezgene/locuslink:9971(identity) entrezgene/locuslink:6257(identity) intact:EBI-16436328(see-also)|intact:EBI-16436338(see-also) isoform-comment:Produced by alternative promoter usage. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xpym/8iahj3FgUKjQK3nt2XJZVI9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:ecEh8cm1qV5iC9MPFjh2twRJz3s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96RI1-1 uniprotkb:A0A0S2Z4M5 intact:EBI-12417284|ensembl:ENSP00000376712|ensembl:ENSP00000496908 intact:EBI-16436147 psi-mi:q96ri1-1(display_long)|uniprotkb:NR1H4(gene name)|psi-mi:NR1H4(display_short)|uniprotkb:BAR(gene name synonym)|uniprotkb:FXR(gene name synonym)|uniprotkb:Farnesoid X-activated receptor(gene name synonym)|uniprotkb:Farnesol receptor HRR-1(gene name synonym)|uniprotkb:HRR1(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group H member 4(gene name synonym)|uniprotkb:RIP14(gene name synonym)|uniprotkb:FXRalpha1(isoform synonym)|uniprotkb:"FXRalpha1(+)"(isoform synonym)|uniprotkb:Retinoid X receptor-interacting protein 14(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473389 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1250177(isoform-parent)|uniprotkb:Q96RI1-1(isoform-parent)|ensembl:ENSG00000012504(gene)|ensembl:ENST00000392986(transcript)|ensembl:ENST00000648861(transcript)|entrezgene/locuslink:9971(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16436328(see-also)|intact:EBI-16436338(see-also) isoform-comment:Produced by alternative promoter usage. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xpym/8iahj3FgUKjQK3nt2XJZVI9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:Ak/Z1is5XBeKdEbgm2u+MxnL9T4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:P28702 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473371 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16436137(see-also)|intact:EBI-16436162(see-also)|intact:EBI-16436172(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:4wWlT9MpE6l6Alp+lV9d8wZ0VTw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96S82 intact:EBI-16429002 intact:EBI-348604|uniprotkb:Q96I03|ensembl:ENSP00000378518|ensembl:ENSP00000454828|ensembl:ENSP00000457703|ensembl:ENSP00000457708|ensembl:ENSP00000500164|ensembl:ENSP00000500266|ensembl:ENSP00000500442|ensembl:ENSP00000500520|ensembl:ENSP00000500882|ensembl:ENSP00000354883|uniprotkb:D3DW57 - psi-mi:ubl7_human(display_long)|uniprotkb:Ubiquitin-like protein SB132(gene name synonym)|uniprotkb:Bone marrow stromal cell ubiquitin-like protein(gene name synonym)|uniprotkb:UBL7(gene name)|psi-mi:UBL7(display_short)|uniprotkb:BMSCUBP(gene name synonym)|uniprotkb:SB132(orf name) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473355 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116296.1|refseq:NP_957717.1|ensembl:ENST00000361351(transcript)|ensembl:ENST00000395081(transcript)|ensembl:ENST00000564488(transcript)|ensembl:ENST00000565335(transcript)|ensembl:ENST00000567435(transcript)|ensembl:ENST00000673054(transcript)|ensembl:ENST00000673073(transcript)|ensembl:ENST00000673120(transcript)|ensembl:ENST00000673153(transcript)|ensembl:ENST00000673461(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|interpro:IPR000626(Ubiquitin)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR029071|rcsb pdb:2CWB|rcsb pdb:2DEN|ensembl:ENSG00000138629(gene)|ensembl:ENSG00000288408(gene)|refseq:NP_001273668.1|refseq:NP_001273669.1|refseq:NP_001273670.1|refseq:NP_001273671.1|entrezgene/locuslink:84993(identity) entrezgene/locuslink:6257(identity) intact:EBI-16435254(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4E0ErEIkP/AQb+OHRuOd5wbXU/s9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:ps4+jCqwt8yRLmrACxwQ/gL9BTA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96S82 uniprotkb:A0A0S2Z4M5 intact:EBI-348604|uniprotkb:Q96I03|ensembl:ENSP00000378518|ensembl:ENSP00000454828|ensembl:ENSP00000457703|ensembl:ENSP00000457708|ensembl:ENSP00000500164|ensembl:ENSP00000500266|ensembl:ENSP00000500442|ensembl:ENSP00000500520|ensembl:ENSP00000500882|ensembl:ENSP00000354883|uniprotkb:D3DW57 intact:EBI-16436147 psi-mi:ubl7_human(display_long)|uniprotkb:Ubiquitin-like protein SB132(gene name synonym)|uniprotkb:Bone marrow stromal cell ubiquitin-like protein(gene name synonym)|uniprotkb:UBL7(gene name)|psi-mi:UBL7(display_short)|uniprotkb:BMSCUBP(gene name synonym)|uniprotkb:SB132(orf name) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473339 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116296.1|refseq:NP_957717.1|ensembl:ENST00000361351(transcript)|ensembl:ENST00000395081(transcript)|ensembl:ENST00000564488(transcript)|ensembl:ENST00000565335(transcript)|ensembl:ENST00000567435(transcript)|ensembl:ENST00000673054(transcript)|ensembl:ENST00000673073(transcript)|ensembl:ENST00000673120(transcript)|ensembl:ENST00000673153(transcript)|ensembl:ENST00000673461(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|interpro:IPR000626(Ubiquitin)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR029071|rcsb pdb:2CWB|rcsb pdb:2DEN|ensembl:ENSG00000138629(gene)|ensembl:ENSG00000288408(gene)|refseq:NP_001273668.1|refseq:NP_001273669.1|refseq:NP_001273670.1|refseq:NP_001273671.1|entrezgene/locuslink:84993(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16435254(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4E0ErEIkP/AQb+OHRuOd5wbXU/s9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:s68nk+FBO2Y8ApqAtE08fYGBfNM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96S82 uniprotkb:P28702 intact:EBI-348604|uniprotkb:Q96I03|ensembl:ENSP00000378518|ensembl:ENSP00000454828|ensembl:ENSP00000457703|ensembl:ENSP00000457708|ensembl:ENSP00000500164|ensembl:ENSP00000500266|ensembl:ENSP00000500442|ensembl:ENSP00000500520|ensembl:ENSP00000500882|ensembl:ENSP00000354883|uniprotkb:D3DW57 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:ubl7_human(display_long)|uniprotkb:Ubiquitin-like protein SB132(gene name synonym)|uniprotkb:Bone marrow stromal cell ubiquitin-like protein(gene name synonym)|uniprotkb:UBL7(gene name)|psi-mi:UBL7(display_short)|uniprotkb:BMSCUBP(gene name synonym)|uniprotkb:SB132(orf name) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473323 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116296.1|refseq:NP_957717.1|ensembl:ENST00000361351(transcript)|ensembl:ENST00000395081(transcript)|ensembl:ENST00000564488(transcript)|ensembl:ENST00000565335(transcript)|ensembl:ENST00000567435(transcript)|ensembl:ENST00000673054(transcript)|ensembl:ENST00000673073(transcript)|ensembl:ENST00000673120(transcript)|ensembl:ENST00000673153(transcript)|ensembl:ENST00000673461(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|interpro:IPR000626(Ubiquitin)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR029071|rcsb pdb:2CWB|rcsb pdb:2DEN|ensembl:ENSG00000138629(gene)|ensembl:ENSG00000288408(gene)|refseq:NP_001273668.1|refseq:NP_001273669.1|refseq:NP_001273670.1|refseq:NP_001273671.1|entrezgene/locuslink:84993(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16435254(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:4E0ErEIkP/AQb+OHRuOd5wbXU/s9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:DsdsCLGE5OF2EhbnASThoaDjZB8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P10276 intact:EBI-16429002 intact:EBI-413374|uniprotkb:P78456|uniprotkb:Q13440|uniprotkb:Q13441|uniprotkb:Q96S41|uniprotkb:Q9NQS0|uniprotkb:B8Y636|ensembl:ENSP00000254066|ensembl:ENSP00000377649 - psi-mi:rara_human(display_long)|uniprotkb:RARA(gene name)|psi-mi:RARA(display_short)|uniprotkb:NR1B1(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group B member 1(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473306 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000955.1|refseq:NP_001019980.1|refseq:NP_001138773.1|refseq:XP_011523397.1|refseq:NP_001138774.1|refseq:XP_005257610.1|refseq:XP_005257611.1|ensembl:ENSG00000131759(gene)|ensembl:ENST00000254066(transcript)|ensembl:ENST00000394089(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000900"(translation repressor activity, mRNA regulatory element binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001657"(ureteric bud development)|go:"GO:0001843"(neural tube closure)|go:"GO:0001889"(liver development)|go:"GO:0001972"(retinoic acid binding)|go:"GO:0002068"(glandular epithelial cell development)|go:"GO:0003417"(growth plate cartilage development)|go:"GO:0003682"(chromatin binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007165"(signal transduction)|go:"GO:0007281"(germ cell development)|go:"GO:0007565"(female pregnancy)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009986"(cell surface)|go:"GO:0015629"(actin cytoskeleton)|go:"GO:0019899"(enzyme binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0021766"(hippocampus development)|go:"GO:0030154"(cell differentiation)|go:"GO:0030425"(dendrite)|go:"GO:0030850"(prostate gland development)|go:"GO:0030853"(negative regulation of granulocyte differentiation)|go:"GO:0031076"(embryonic camera-type eye development)|go:"GO:0031490"(chromatin DNA binding)|go:"GO:0031641"(regulation of myelination)|go:"GO:0032355"(response to estradiol)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0032689"(negative regulation of interferon-gamma production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032736"(positive regulation of interleukin-13 production)|go:"GO:0032753"(positive regulation of interleukin-4 production)|go:"GO:0032754"(positive regulation of interleukin-5 production)|go:"GO:0032991"(protein-containing complex)|go:"GO:0033189"(response to vitamin A)|go:"GO:0034097"(response to cytokine)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043277"(apoptotic cell clearance)|go:"GO:0043422"(protein kinase B binding)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045471"(response to ethanol)|go:"GO:0045630"(positive regulation of T-helper 2 cell differentiation)|go:"GO:0045666"(positive regulation of neuron differentiation)|go:"GO:0045787"(positive regulation of cell cycle)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048027"(mRNA 5'-UTR binding)|go:"GO:0048167"(regulation of synaptic plasticity)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051018"(protein kinase A binding)|go:"GO:0055012"(ventricular cardiac muscle cell differentiation)|go:"GO:0051099"(positive regulation of binding)|go:"GO:0051393"(alpha-actinin binding)|go:"GO:0060010"(Sertoli cell fate commitment)|go:"GO:0060173"(limb development)|go:"GO:0060324"(face development)|go:"GO:0060591"(chondroblast differentiation)|go:"GO:0060534"(trachea cartilage development)|go:"GO:0061037"(negative regulation of cartilage development)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071391"(cellular response to estrogen stimulus)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR003078(Retinoic acid receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|mint:P10276|rcsb pdb:1DKF|rcsb pdb:1DSZ|rcsb pdb:3A9E|rcsb pdb:3KMR|rcsb pdb:3KMZ|rcsb pdb:4DQM|rcsb pdb:5K13|rcsb pdb:6XWG|reactome:R-HSA-4090294|reactome:R-HSA-5362517|reactome:R-HSA-5617472|reactome:R-HSA-9616222|reactome:R-HSA-383280|dip:DIP-34N|entrezgene/locuslink:5914(identity) entrezgene/locuslink:6257(identity) intact:EBI-16434599(see-also)|intact:EBI-16434609(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:hxW9W0aqa3qEJT5ZilJdJ4b+gEo9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:4kDCKtuLkf0wlVGM7fEYPAz7XSo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 intact:EBI-16429002 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 - psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473290 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) entrezgene/locuslink:6257(identity) intact:EBI-16434047(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:W2N8aPS3ik2EnT7ofcHvXTjVB7w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:A0A0S2Z4M5 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-16436147 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16434047(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:dkX0qokVhXCSmRLytr7irJxVpbY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12800 uniprotkb:P28702 intact:EBI-717422|uniprotkb:Q12801|uniprotkb:Q9UD77|uniprotkb:A8K5E9|uniprotkb:Q9UD75|ensembl:ENSP00000257915 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:tfcp2_human(display_long)|uniprotkb:Transcription factor LSF(gene name synonym)|uniprotkb:SAA3 enhancer factor(gene name synonym)|uniprotkb:TFCP2(gene name)|psi-mi:TFCP2(display_short)|uniprotkb:LSF(gene name synonym)|uniprotkb:SEF(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473258 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001166923.1|refseq:NP_001166924.1|refseq:NP_005644.2|ensembl:ENSG00000135457(gene)|ensembl:ENST00000257915(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0000987"(cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0008134"(transcription factor binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042789"(mRNA transcription by RNA polymerase II)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR007604(CP2 transcription factor)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037599|interpro:IPR041418|mint:Q12800|entrezgene/locuslink:7024(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16434047(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M7mQ08NDYxuawmUEKRgjSdIr+Og9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:/8DA4bc0MGrP1CpV9e/rTTBNITQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43586 uniprotkb:A0A0S2Z4M5 intact:EBI-1050964|uniprotkb:O43585|uniprotkb:O95657|uniprotkb:B5BUK4|uniprotkb:B5BU74|ensembl:ENSP00000452746 intact:EBI-16436147 psi-mi:ppip1_human(display_long)|uniprotkb:CD2-binding protein 1(gene name synonym)|uniprotkb:H-PIP(gene name synonym)|uniprotkb:PSTPIP1(gene name)|psi-mi:PSTPIP1(display_short)|uniprotkb:CD2BP1(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473242 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003969.2|refseq:NP_001308064.1|refseq:NP_001308066.1|ensembl:ENSG00000140368(gene)|ensembl:ENST00000558012(transcript)|go:"GO:0001931"(uropod)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0016020"(membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0032154"(cleavage furrow)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051015"(actin filament binding)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR001452(Src homology-3)|interpro:IPR027267|interpro:IPR030777|interpro:IPR031160|interpro:IPR036028|mint:O43586|rcsb pdb:2DIL|reactome:R-HSA-844456|reactome:R-HSA-9660826|entrezgene/locuslink:9051(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16433157(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JWK4dCYdcVF6mKwe+hoOri1wwps9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:kI0whDKhu286XxONvjj+s6UKf6Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43586 uniprotkb:P28702 intact:EBI-1050964|uniprotkb:O43585|uniprotkb:O95657|uniprotkb:B5BUK4|uniprotkb:B5BU74|ensembl:ENSP00000452746 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:ppip1_human(display_long)|uniprotkb:CD2-binding protein 1(gene name synonym)|uniprotkb:H-PIP(gene name synonym)|uniprotkb:PSTPIP1(gene name)|psi-mi:PSTPIP1(display_short)|uniprotkb:CD2BP1(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473226 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003969.2|refseq:NP_001308064.1|refseq:NP_001308066.1|ensembl:ENSG00000140368(gene)|ensembl:ENST00000558012(transcript)|go:"GO:0001931"(uropod)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0016020"(membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0032154"(cleavage furrow)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051015"(actin filament binding)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR001452(Src homology-3)|interpro:IPR027267|interpro:IPR030777|interpro:IPR031160|interpro:IPR036028|mint:O43586|rcsb pdb:2DIL|reactome:R-HSA-844456|reactome:R-HSA-9660826|entrezgene/locuslink:9051(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16433157(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JWK4dCYdcVF6mKwe+hoOri1wwps9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:uBeZTkrOBp4shfWG8lV/0Ae7ZIs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:A0A0S2Z4M5 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-16436147 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473209 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16433077(see-also)|intact:EBI-16433127(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:uAIlDYWyMrVKSYPWod9ATFWEIoQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:P28702 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473192 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16433077(see-also)|intact:EBI-16433127(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:1tjfvuf55zFLgyCA1QSmVJ5YATI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O94972 intact:EBI-16429002 intact:EBI-741602|uniprotkb:Q7Z3E6|uniprotkb:Q8IYF7|uniprotkb:Q8WYF7|intact:EBI-28976055|ensembl:ENSP00000262294|ensembl:ENSP00000376785|uniprotkb:A8K0V9|uniprotkb:A8K8U4|uniprotkb:A8MZ79|uniprotkb:B4DGZ3|uniprotkb:F8WEE6 - psi-mi:tri37_human(display_long)|uniprotkb:Mulibrey nanism protein(gene name synonym)|uniprotkb:TRIM37(gene name)|psi-mi:TRIM37(display_short)|uniprotkb:KIAA0898(gene name synonym)|uniprotkb:MUL(gene name synonym)|uniprotkb:POB1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 37(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM37(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473176 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005207.1|refseq:NP_056109.1|refseq:NP_001307916.1|ensembl:ENSP00000262294|ensembl:ENST00000393065|ensembl:ENSP00000376784|ensembl:ENSP00000376785|go:"GO:0036353"(histone H2A-K119 monoubiquitination)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070842"(aggresome assembly)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR008974(TRAF-like)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR037299|rcsb pdb:3LRQ|reactome:R-HSA-983168|ensembl:ENSG00000108395(gene)|ensembl:ENST00000262294(transcript)|ensembl:ENST00000393066(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016235"(aggresome)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0035518"(histone H2A monoubiquitination)|refseq:NP_001307919.1|dip:DIP-34437N|entrezgene/locuslink:4591(identity) entrezgene/locuslink:6257(identity) intact:EBI-16432716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y2njeO0MUBrKU9MUvkbo1uZmqkE9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:Mv9GtBXuxejzdxuHcQp/C1q+U5k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O94972 uniprotkb:A0A0S2Z4M5 intact:EBI-741602|uniprotkb:Q7Z3E6|uniprotkb:Q8IYF7|uniprotkb:Q8WYF7|intact:EBI-28976055|ensembl:ENSP00000262294|ensembl:ENSP00000376785|uniprotkb:A8K0V9|uniprotkb:A8K8U4|uniprotkb:A8MZ79|uniprotkb:B4DGZ3|uniprotkb:F8WEE6 intact:EBI-16436147 psi-mi:tri37_human(display_long)|uniprotkb:Mulibrey nanism protein(gene name synonym)|uniprotkb:TRIM37(gene name)|psi-mi:TRIM37(display_short)|uniprotkb:KIAA0898(gene name synonym)|uniprotkb:MUL(gene name synonym)|uniprotkb:POB1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 37(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM37(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473160 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005207.1|refseq:NP_056109.1|refseq:NP_001307916.1|ensembl:ENSP00000262294|ensembl:ENST00000393065|ensembl:ENSP00000376784|ensembl:ENSP00000376785|go:"GO:0036353"(histone H2A-K119 monoubiquitination)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070842"(aggresome assembly)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR008974(TRAF-like)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR037299|rcsb pdb:3LRQ|reactome:R-HSA-983168|ensembl:ENSG00000108395(gene)|ensembl:ENST00000262294(transcript)|ensembl:ENST00000393066(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016235"(aggresome)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0035518"(histone H2A monoubiquitination)|refseq:NP_001307919.1|dip:DIP-34437N|entrezgene/locuslink:4591(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16432716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y2njeO0MUBrKU9MUvkbo1uZmqkE9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:6kN7yvvmOiOtfe/Pa78YVhghKy4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O94972 uniprotkb:P28702 intact:EBI-741602|uniprotkb:Q7Z3E6|uniprotkb:Q8IYF7|uniprotkb:Q8WYF7|intact:EBI-28976055|ensembl:ENSP00000262294|ensembl:ENSP00000376785|uniprotkb:A8K0V9|uniprotkb:A8K8U4|uniprotkb:A8MZ79|uniprotkb:B4DGZ3|uniprotkb:F8WEE6 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:tri37_human(display_long)|uniprotkb:Mulibrey nanism protein(gene name synonym)|uniprotkb:TRIM37(gene name)|psi-mi:TRIM37(display_short)|uniprotkb:KIAA0898(gene name synonym)|uniprotkb:MUL(gene name synonym)|uniprotkb:POB1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 37(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM37(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473144 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005207.1|refseq:NP_056109.1|refseq:NP_001307916.1|ensembl:ENSP00000262294|ensembl:ENST00000393065|ensembl:ENSP00000376784|ensembl:ENSP00000376785|go:"GO:0036353"(histone H2A-K119 monoubiquitination)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0046600"(negative regulation of centriole replication)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070842"(aggresome assembly)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR008974(TRAF-like)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR037299|rcsb pdb:3LRQ|reactome:R-HSA-983168|ensembl:ENSG00000108395(gene)|ensembl:ENST00000262294(transcript)|ensembl:ENST00000393066(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005777"(peroxisome)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016235"(aggresome)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0032088"(negative regulation of NF-kappaB transcription factor activity)|go:"GO:0035518"(histone H2A monoubiquitination)|refseq:NP_001307919.1|dip:DIP-34437N|entrezgene/locuslink:4591(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16432716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y2njeO0MUBrKU9MUvkbo1uZmqkE9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:iIJP/lkfE26iqBS8D0xGMnSZTNc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:P28702 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473127 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16432168(see-also)|intact:EBI-16432178(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:plQD6GfJY3DxjVu8Coe02DnYpGg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 intact:EBI-16429002 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 - psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473108 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) entrezgene/locuslink:6257(identity) intact:EBI-16431928(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:iFK2kTzkm8fWn4N9OtvK9Pn2vG4 true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z4M5 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16436147 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473089 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16431928(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:OuNrcSL5T8+ryouUcMai+OWWHiE true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:P28702 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473070 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16431928(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:Spwo90i0Ld+LLwwP0aq/5kexDUg true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P10276-2 intact:EBI-16429002 intact:EBI-10197061|ensembl:ENSP00000377643 - psi-mi:p10276-2(display_long)|uniprotkb:NR1B1(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group B member 1(gene name synonym)|uniprotkb:RARA(gene name)|psi-mi:RARA(display_short) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473054 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-413374(isoform-parent)|ensembl:ENSG00000131759(gene)|ensembl:ENST00000394081(transcript)|uniprotkb:P10276-2(isoform-parent)|entrezgene/locuslink:5914(identity) entrezgene/locuslink:6257(identity) intact:EBI-16431576(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N94HvF3F7xteoDkwcGx1TS7x+Qw9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:j4DuGIoAMgKiX61Eo9ke8ZAoWDQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96B26 intact:EBI-16429002 intact:EBI-371922|uniprotkb:O43480|uniprotkb:Q5TBA5|ensembl:ENSP00000374354 - psi-mi:exos8_human(display_long)|uniprotkb:OIP2(gene name synonym)|uniprotkb:RRP43(gene name synonym)|uniprotkb:EXOSC8(gene name)|psi-mi:EXOSC8(display_short)|uniprotkb:Ribosomal RNA-processing protein 43(gene name synonym)|uniprotkb:Exosome component 8(gene name synonym)|uniprotkb:p9(gene name synonym)|uniprotkb:Opa-interacting protein 2(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473038 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_852480.1|ensembl:ENSG00000120699(gene)|ensembl:ENST00000389704(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001650"(fibrillar center)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0035925"(mRNA 3'-UTR AU-rich region binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR027408|interpro:IPR033196|go:"GO:0005829"(cytosol)|mint:Q96B26|rcsb pdb:2NN6|rcsb pdb:6D6Q|rcsb pdb:6D6R|rcsb pdb:6H25|reactome:R-HSA-380994|reactome:R-HSA-429958|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-450604|reactome:R-HSA-6791226|interpro:IPR036345|dip:DIP-31133N|entrezgene/locuslink:11340(identity) entrezgene/locuslink:6257(identity) intact:EBI-16431042(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y/cReHiPMubzNruyETohBjbRick9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:gNqubSiOBgV1QPdW910/QhgiGF8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96B26 uniprotkb:A0A0S2Z4M5 intact:EBI-371922|uniprotkb:O43480|uniprotkb:Q5TBA5|ensembl:ENSP00000374354 intact:EBI-16436147 psi-mi:exos8_human(display_long)|uniprotkb:OIP2(gene name synonym)|uniprotkb:RRP43(gene name synonym)|uniprotkb:EXOSC8(gene name)|psi-mi:EXOSC8(display_short)|uniprotkb:Ribosomal RNA-processing protein 43(gene name synonym)|uniprotkb:Exosome component 8(gene name synonym)|uniprotkb:p9(gene name synonym)|uniprotkb:Opa-interacting protein 2(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473022 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_852480.1|ensembl:ENSG00000120699(gene)|ensembl:ENST00000389704(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001650"(fibrillar center)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0035925"(mRNA 3'-UTR AU-rich region binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR027408|interpro:IPR033196|go:"GO:0005829"(cytosol)|mint:Q96B26|rcsb pdb:2NN6|rcsb pdb:6D6Q|rcsb pdb:6D6R|rcsb pdb:6H25|reactome:R-HSA-380994|reactome:R-HSA-429958|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-450604|reactome:R-HSA-6791226|interpro:IPR036345|dip:DIP-31133N|entrezgene/locuslink:11340(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16431042(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y/cReHiPMubzNruyETohBjbRick9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:l9rbsZs0kLHD1/BwsWRmNlmQAiI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96B26 uniprotkb:P28702 intact:EBI-371922|uniprotkb:O43480|uniprotkb:Q5TBA5|ensembl:ENSP00000374354 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:exos8_human(display_long)|uniprotkb:OIP2(gene name synonym)|uniprotkb:RRP43(gene name synonym)|uniprotkb:EXOSC8(gene name)|psi-mi:EXOSC8(display_short)|uniprotkb:Ribosomal RNA-processing protein 43(gene name synonym)|uniprotkb:Exosome component 8(gene name synonym)|uniprotkb:p9(gene name synonym)|uniprotkb:Opa-interacting protein 2(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473006 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_852480.1|ensembl:ENSG00000120699(gene)|ensembl:ENST00000389704(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001650"(fibrillar center)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0035925"(mRNA 3'-UTR AU-rich region binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR027408|interpro:IPR033196|go:"GO:0005829"(cytosol)|mint:Q96B26|rcsb pdb:2NN6|rcsb pdb:6D6Q|rcsb pdb:6D6R|rcsb pdb:6H25|reactome:R-HSA-380994|reactome:R-HSA-429958|reactome:R-HSA-450385|reactome:R-HSA-450513|reactome:R-HSA-450604|reactome:R-HSA-6791226|interpro:IPR036345|dip:DIP-31133N|entrezgene/locuslink:11340(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16431042(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:y/cReHiPMubzNruyETohBjbRick9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:PEjzYiZ3QgzCdr39ib9C57V7OsU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13133-3 intact:EBI-16429002 intact:EBI-11952806|ensembl:ENSP00000378793 - psi-mi:q13133-3(display_long)|uniprotkb:NR1H3(gene name)|psi-mi:NR1H3(display_short)|uniprotkb:LXRA(gene name synonym)|uniprotkb:Liver X receptor alpha(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group H member 3(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472989 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-781356(isoform-parent)|uniprotkb:Q13133-3(isoform-parent)|ensembl:ENSG00000025434(gene)|ensembl:ENST00000395397(transcript)|entrezgene/locuslink:10062(identity) entrezgene/locuslink:6257(identity) intact:EBI-16430261(see-also)|intact:EBI-16430271(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:goIAjD2Xf+TWijq46YePOb3130s9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:jXEenehpAij/qbGbo4xfZXbKnjM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P10826-2 intact:EBI-16429002 intact:EBI-8583223|ensembl:ENSP00000332296|intact:MINT-2768912 - psi-mi:p10826-2(display_long)|uniprotkb:RARB(gene name)|psi-mi:RARB(display_short)|uniprotkb:HAP(gene name synonym)|uniprotkb:HBV-activated protein(gene name synonym)|uniprotkb:NR1B2(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group B member 2(gene name synonym)|uniprotkb:RAR-epsilon(gene name synonym) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472972 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:P10826-2(isoform-parent)|ensembl:ENSG00000077092(gene)|ensembl:ENST00000330688(transcript)|intact:EBI-2568838(isoform-parent)|entrezgene/locuslink:5915(identity) entrezgene/locuslink:6257(identity) intact:EBI-16429684(see-also)|intact:EBI-16429694(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SZ7/AxxaSSb8WNWvH8y4jq0Mv8g9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:ZPEwmvIE0yArGfssE3AU5UCQH74 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P10826-2 uniprotkb:A0A0S2Z4M5 intact:EBI-8583223|ensembl:ENSP00000332296|intact:MINT-2768912 intact:EBI-16436147 psi-mi:p10826-2(display_long)|uniprotkb:RARB(gene name)|psi-mi:RARB(display_short)|uniprotkb:HAP(gene name synonym)|uniprotkb:HBV-activated protein(gene name synonym)|uniprotkb:NR1B2(gene name synonym)|uniprotkb:Nuclear receptor subfamily 1 group B member 2(gene name synonym)|uniprotkb:RAR-epsilon(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472955 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:P10826-2(isoform-parent)|ensembl:ENSG00000077092(gene)|ensembl:ENST00000330688(transcript)|intact:EBI-2568838(isoform-parent)|entrezgene/locuslink:5915(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16429684(see-also)|intact:EBI-16429694(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SZ7/AxxaSSb8WNWvH8y4jq0Mv8g9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:pIqpOpn9mMe94H9jcCbFdkD0F/w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 intact:EBI-16429002 intact:EBI-10172526|ensembl:ENSP00000413976 - psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:"ccsb isoform id: rxrb_4"(display_short)|psi-mi:EBI-16429002(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472936 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) entrezgene/locuslink:6257(identity) intact:EBI-16429498(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:Vq69a0rJ8Ic7TwJaNhgz3BF/BL09606 rigid:l90SdhBXVORV0RX+oyPrIx0vICM true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:A0A0S2Z4M5 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-16436147 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472917 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16429498(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:U/bGqc8FqDTsJzm6AGe9yy5Bxqc true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:P28702 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472898 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16429498(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:uk8sqgJ7JAIRxXYfMYMiXx2IhUQ true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15162 uniprotkb:A0A0S2Z4M5 intact:EBI-740019|ensembl:ENSP00000345494|uniprotkb:B2R8H8|uniprotkb:B4DTE8 intact:EBI-16436147 psi-mi:pls1_human(display_long)|uniprotkb:PLSCR1(gene name)|psi-mi:PLSCR1(display_short)|uniprotkb:"Ca(2+)-dependent phospholipid scramblase 1"(gene name synonym)|uniprotkb:Erythrocyte phospholipid scramblase(gene name synonym)|uniprotkb:MmTRA1b(gene name synonym)|uniprotkb:"Mg(2+)-dependent nuclease"(gene name synonym) psi-mi:a0a0s2z4m5_human(display_long)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472882 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000188313(gene)|ensembl:ENST00000342435(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001618"(virus receptor activity)|go:"GO:0003677"(DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006659"(phosphatidylserine biosynthetic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006953"(acute-phase response)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010288"(response to lead ion)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0017121"(plasma membrane phospholipid scrambling)|go:"GO:0017124"(SH3 domain binding)|ensembl:ENSP00000345494|ensembl:ENST00000448787|ensembl:ENSP00000411675|refseq:NP_066928.1|go:"GO:0017128"(phospholipid scramblase activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0030168"(platelet activation)|go:"GO:0032791"(lead ion binding)|go:"GO:0033003"(regulation of mast cell activation)|go:"GO:0035456"(response to interferon-beta)|go:"GO:0042609"(CD4 receptor binding)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045121"(membrane raft)|go:"GO:0045340"(mercury ion binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051607"(defense response to virus)|go:"GO:0060368"(regulation of Fc receptor mediated stimulatory signaling pathway)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070782"(phosphatidylserine exposure on apoptotic cell surface)|go:"GO:1905820"(positive regulation of chromosome separation)|go:"GO:2000373"("positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity")|interpro:IPR005552(Scramblase)|mint:O15162|rcsb pdb:1Y2A|refseq:XP_011511209.1|refseq:XP_011511206.1|refseq:XP_005247595.1|refseq:XP_011511208.1|refseq:XP_016862118.1|entrezgene/locuslink:5359(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0008270"(zinc ion binding)|go:"GO:0043565"(sequence-specific DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR035500|entrezgene/locuslink:6257(identity) intact:EBI-16429004(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:XudfvUkrZbB28t9tpFkokgnDFGc9606 rogid:ahP5N+EM8WYJC9d1uayPKhpH9gI9606 rigid:Mkn2AgMP1/SKgiO2ffOJmB56j40 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15162 uniprotkb:P28702 intact:EBI-740019|ensembl:ENSP00000345494|uniprotkb:B2R8H8|uniprotkb:B4DTE8 intact:EBI-748576|uniprotkb:P28703|uniprotkb:Q59G65|uniprotkb:Q5JP92|uniprotkb:Q5STQ1|ensembl:ENSP00000363812|ensembl:ENSP00000372704|ensembl:ENSP00000402506|ensembl:ENSP00000410468|ensembl:ENSP00000411238|ensembl:ENSP00000415199 psi-mi:pls1_human(display_long)|uniprotkb:PLSCR1(gene name)|psi-mi:PLSCR1(display_short)|uniprotkb:"Ca(2+)-dependent phospholipid scramblase 1"(gene name synonym)|uniprotkb:Erythrocyte phospholipid scramblase(gene name synonym)|uniprotkb:MmTRA1b(gene name synonym)|uniprotkb:"Mg(2+)-dependent nuclease"(gene name synonym) psi-mi:rxrb_human(display_long)|uniprotkb:Retinoid X receptor beta(gene name synonym)|uniprotkb:Nuclear receptor subfamily 2 group B member 2(gene name synonym)|uniprotkb:RXRB(gene name)|psi-mi:RXRB(display_short)|uniprotkb:NR2B2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472866 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000188313(gene)|ensembl:ENST00000342435(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001618"(virus receptor activity)|go:"GO:0003677"(DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006659"(phosphatidylserine biosynthetic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006953"(acute-phase response)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010288"(response to lead ion)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0017121"(plasma membrane phospholipid scrambling)|go:"GO:0017124"(SH3 domain binding)|ensembl:ENSP00000345494|ensembl:ENST00000448787|ensembl:ENSP00000411675|refseq:NP_066928.1|go:"GO:0017128"(phospholipid scramblase activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0030168"(platelet activation)|go:"GO:0032791"(lead ion binding)|go:"GO:0033003"(regulation of mast cell activation)|go:"GO:0035456"(response to interferon-beta)|go:"GO:0042609"(CD4 receptor binding)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045121"(membrane raft)|go:"GO:0045340"(mercury ion binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051607"(defense response to virus)|go:"GO:0060368"(regulation of Fc receptor mediated stimulatory signaling pathway)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070782"(phosphatidylserine exposure on apoptotic cell surface)|go:"GO:1905820"(positive regulation of chromosome separation)|go:"GO:2000373"("positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity")|interpro:IPR005552(Scramblase)|mint:O15162|rcsb pdb:1Y2A|refseq:XP_011511209.1|refseq:XP_011511206.1|refseq:XP_005247595.1|refseq:XP_011511208.1|refseq:XP_016862118.1|entrezgene/locuslink:5359(identity) refseq:NP_068811.1|refseq:NP_001257330.1|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR000003(Retinoid X receptor)|interpro:IPR000536(Nuclear hormone receptor, ligand-binding, core)|interpro:IPR001628(Zinc finger, nuclear hormone receptor-type)|interpro:IPR001723(Steroid hormone receptor)|interpro:IPR013088(Zinc finger, NHR/GATA-type)|interpro:IPR035500|rcsb pdb:1H9U|rcsb pdb:1UHL|rcsb pdb:5HJP|rcsb pdb:5I4V|rcsb pdb:5KYA|rcsb pdb:5KYJ|rcsb pdb:7A78|reactome:R-HSA-1989781|reactome:R-HSA-383280|reactome:R-HSA-5362517|reactome:R-HSA-9029558|reactome:R-HSA-9029569|reactome:R-HSA-9031525|reactome:R-HSA-9031528|reactome:R-HSA-9623433|reactome:R-HSA-9632974|ensembl:ENSG00000204231(gene)|ensembl:ENSG00000206289(gene)|ensembl:ENSG00000227322(gene)|ensembl:ENSG00000228333(gene)|ensembl:ENSG00000231321(gene)|ensembl:ENSG00000235712(gene)|ensembl:ENST00000374680(transcript)|ensembl:ENST00000383217(transcript)|ensembl:ENST00000415157(transcript)|ensembl:ENST00000415909(transcript)|ensembl:ENST00000431820(transcript)|ensembl:ENST00000436753(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003707"(steroid hormone receptor activity)|go:"GO:0004879"(nuclear receptor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0032526"(response to retinoic acid)|go:"GO:0044323"(retinoic acid-responsive element binding)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048384"(retinoic acid receptor signaling pathway)|go:"GO:0048856"(anatomical structure development)|entrezgene/locuslink:6257(identity) intact:EBI-16429004(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:XudfvUkrZbB28t9tpFkokgnDFGc9606 rogid:i5hD8MMgynw4AEw2nJBHjevjDQ89606 rigid:8mbSyibJVly/ouHGbeptZwsiyVU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:Q9Y252 intact:EBI-16439278 intact:EBI-2341483|uniprotkb:Q9UF41|uniprotkb:Q5W0H0|uniprotkb:B4DDP0|uniprotkb:Q9BZP5|ensembl:ENSP00000342121|ensembl:ENSP00000370982|ensembl:ENSP00000371000 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:rnf6_human(display_long)|uniprotkb:RNF6(gene name)|psi-mi:RNF6(display_short)|uniprotkb:SPG2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase RNF6(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16472850 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) refseq:XP_011533479.1|refseq:XP_011533480.1|refseq:NP_005968.1|refseq:NP_898864.1|refseq:NP_898865.1|refseq:NP_898866.1|refseq:XP_005266542.1|refseq:XP_005266543.1|ensembl:ENSG00000127870(gene)|ensembl:ENST00000346166(transcript)|ensembl:ENST00000381570(transcript)|ensembl:ENST00000381588(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0030424"(axon)|go:"GO:0030517"(negative regulation of axon extension)|go:"GO:0031965"(nuclear membrane)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044314"(protein K27-linked ubiquitination)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0060765"(regulation of androgen receptor signaling pathway)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070936"(protein K48-linked ubiquitination)|go:"GO:0085020"(protein K6-linked ubiquitination)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|reactome:R-HSA-983168|entrezgene/locuslink:6049(identity) intact:EBI-16439703(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:SDWFGC1UYHyNjerMH5quYDeKiQ49606 rigid:zLRXOfUDZX9OmdtNFfhnoRB8c18 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96B96 uniprotkb:P04271 intact:EBI-7055862|ensembl:ENSP00000233047|ensembl:ENSP00000261388|ensembl:ENSP00000460687|ensembl:ENSP00000492164|ensembl:ENSP00000492501|ensembl:ENSP00000491056|intact:MINT-8163962|intact:MINT-8201794|uniprotkb:A6NMA9|uniprotkb:O00323|uniprotkb:B4DEC1 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 psi-mi:ldaf1_human(display_long)|uniprotkb:LDAF1(gene name)|psi-mi:LDAF1(display_short)|uniprotkb:Promethin(gene name synonym)|uniprotkb:TMEM159(gene name synonym)|uniprotkb:Transmembrane protein 159(gene name synonym) psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473668 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001288698.1|refseq:NP_001288700.1|refseq:NP_001288702.1|refseq:NP_001288703.1|refseq:NP_001288704.1|ensembl:ENSG00000011638(gene)|ensembl:ENSG00000283997(gene)|ensembl:ENST00000233047(transcript)|ensembl:ENST00000261388(transcript)|ensembl:ENST00000572599(transcript)|ensembl:ENST00000638934(transcript)|ensembl:ENST00000640188(transcript)|ensembl:ENST00000640514(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0016021"(integral component of membrane)|go:"GO:0140042"(lipid droplet formation)|interpro:IPR029709|mint:Q96B96|refseq:NP_065155.3|refseq:XP_005255496.1|refseq:XP_006721129.1|entrezgene/locuslink:57146(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) intact:EBI-16433197(see-also) comment:mint - comment:"Evidence for isoform CCSB isoform ID: S100B_1 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qDMjn8OVxY8eRUFJTc8hxD3Tk0c9606 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rigid:0BTil7T0QqJyCIlGs0FUbTjzOgg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WW34-2 uniprotkb:P04271 intact:EBI-11528917|ensembl:ENSP00000369959 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 psi-mi:q8ww34-2(display_long)|uniprotkb:TMEM239(gene name)|psi-mi:TMEM239(display_short) psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473652 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-9675724(isoform-parent)|uniprotkb:Q8WW34-2(isoform-parent)|ensembl:ENSG00000198326(gene)|ensembl:ENST00000380585(transcript)|entrezgene/locuslink:100288797(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) intact:EBI-16432656(see-also) isoform-comment:No experimental confirmation available. - comment:"Evidence for isoform CCSB isoform ID: S100B_1 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1VqWIwPpWs6WjW8eDoJUHz2pegw9606 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rigid:vo0sxxLMrrw40b4ACaH0jA5OcP0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P0C7W6 uniprotkb:A0A0S2Z4E5 intact:EBI-2548868|ensembl:ENSP00000329860 intact:EBI-16432288 psi-mi:cc172_human(display_long)|uniprotkb:CCDC172(gene name)|psi-mi:CCDC172(display_short)|uniprotkb:C10orf96(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474588 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_940917.1|ensembl:ENSG00000182645(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0097225"(sperm midpiece)|interpro:IPR029618|mint:P0C7W6|ensembl:ENST00000333254(transcript)|refseq:XP_016871695.1|entrezgene/locuslink:374355(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16440716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JAaMYXob1bjFtiCvHmuzgCvq+FU9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:HJRl3l20mQQ31+TuorpRv/6xzDs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P29034 uniprotkb:A8MRB1 intact:EBI-752230|uniprotkb:O00266|uniprotkb:Q3KRB9|uniprotkb:Q5RHS8|uniprotkb:Q9BU83|ensembl:ENSP00000357697|ensembl:ENSP00000357698|ensembl:ENSP00000357699|ensembl:ENSP00000473260 intact:EBI-16432654|ensembl:ENSP00000356038 psi-mi:s10a2_human(display_long)|uniprotkb:S100 calcium-binding protein A2(gene name synonym)|uniprotkb:CAN19(gene name synonym)|uniprotkb:S100A2(gene name)|psi-mi:S100A2(display_short)|uniprotkb:S100L(gene name synonym)|uniprotkb:Protein S-100L(gene name synonym) psi-mi:a8mrb1_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473714 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005969.1|ensembl:ENSG00000196754(gene)|ensembl:ENST00000368708(transcript)|ensembl:ENST00000368709(transcript)|ensembl:ENST00000368710(transcript)|ensembl:ENST00000487430(transcript)|go:"GO:0005509"(calcium ion binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043542"(endothelial cell migration)|go:"GO:0046914"(transition metal ion binding)|go:"GO:0048306"(calcium-dependent protein binding)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR034325|mint:P29034|rcsb pdb:2RGI|rcsb pdb:4DUQ|entrezgene/locuslink:6273(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000367071(transcript)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR026790|entrezgene/locuslink:6285(identity) intact:EBI-16434379(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_2 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:QcJWxtqLrbXj++33nNw9nHxj5oE9606 rogid:YQrqesg+7sfVz8LrMVmDv6yU0lI9606 rigid:CqF/wkpANeHcXuhJVWYTy+nPryM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z4E5 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16432288 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474553 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16438600(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:6tEx4D9xL4/iiA5+4O3Ca+I1epM true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z4F2 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16429215 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474534 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16438600(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:1sbTnPwVeX2VeHR7zNDxytGnjMI true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:Q15561 - intact:EBI-747736|ensembl:ENSP00000352926|uniprotkb:Q92883|uniprotkb:Q96BK2|uniprotkb:Q6MZR9|uniprotkb:H0Y308|uniprotkb:Q8NEV5 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:tead4_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short)|uniprotkb:RTEF1(gene name synonym)|uniprotkb:TCF13L1(gene name synonym)|uniprotkb:TEF3(gene name synonym)|uniprotkb:TEA domain family member 4(gene name synonym)|uniprotkb:Transcription factor RTEF-1(gene name synonym)|uniprotkb:Transcription factor 13-like 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474514 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) refseq:NP_003204.2|refseq:NP_958849.1|refseq:NP_958851.1|ensembl:ENSG00000197905(gene)|ensembl:ENST00000359864(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001501"(skeletal system development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007517"(muscle organ development)|go:"GO:0035329"(hippo signaling)|go:"GO:0048568"(embryonic organ development)|interpro:IPR000818(TEA/ATTS)|interpro:IPR016361(Transcriptional enhancer factor)|interpro:IPR027255|interpro:IPR038096|interpro:IPR041086|rcsb pdb:5GZB|rcsb pdb:5NO6|rcsb pdb:5OAQ|rcsb pdb:6GE3|rcsb pdb:6GE4|rcsb pdb:6GE5|rcsb pdb:6GE6|rcsb pdb:6GEC|rcsb pdb:6GEE|rcsb pdb:6GEG|rcsb pdb:6GEI|rcsb pdb:6GEK|rcsb pdb:6HIK|rcsb pdb:6Q2X|rcsb pdb:6Q36|rcsb pdb:6SEN|reactome:R-HSA-2032785|rcsb pdb:6SEO|reactome:R-HSA-8951671|dip:DIP-61626N|entrezgene/locuslink:7004(identity) intact:EBI-16437079(see-also)|intact:EBI-16437089(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:DSb1zdydvEWM1RQ8uRwOJ7dX6AE9606 rigid:dyzmVQ3eU6SSsv0eMArtihg57FQ true - sufficient binding region:74-434 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:Q15561 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-747736|ensembl:ENSP00000352926|uniprotkb:Q92883|uniprotkb:Q96BK2|uniprotkb:Q6MZR9|uniprotkb:H0Y308|uniprotkb:Q8NEV5 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:tead4_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short)|uniprotkb:RTEF1(gene name synonym)|uniprotkb:TCF13L1(gene name synonym)|uniprotkb:TEF3(gene name synonym)|uniprotkb:TEA domain family member 4(gene name synonym)|uniprotkb:Transcription factor RTEF-1(gene name synonym)|uniprotkb:Transcription factor 13-like 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474494 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) refseq:NP_003204.2|refseq:NP_958849.1|refseq:NP_958851.1|ensembl:ENSG00000197905(gene)|ensembl:ENST00000359864(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001501"(skeletal system development)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007517"(muscle organ development)|go:"GO:0035329"(hippo signaling)|go:"GO:0048568"(embryonic organ development)|interpro:IPR000818(TEA/ATTS)|interpro:IPR016361(Transcriptional enhancer factor)|interpro:IPR027255|interpro:IPR038096|interpro:IPR041086|rcsb pdb:5GZB|rcsb pdb:5NO6|rcsb pdb:5OAQ|rcsb pdb:6GE3|rcsb pdb:6GE4|rcsb pdb:6GE5|rcsb pdb:6GE6|rcsb pdb:6GEC|rcsb pdb:6GEE|rcsb pdb:6GEG|rcsb pdb:6GEI|rcsb pdb:6GEK|rcsb pdb:6HIK|rcsb pdb:6Q2X|rcsb pdb:6Q36|rcsb pdb:6SEN|reactome:R-HSA-2032785|rcsb pdb:6SEO|reactome:R-HSA-8951671|dip:DIP-61626N|entrezgene/locuslink:7004(identity) intact:EBI-16435184(see-also)|intact:EBI-16435194(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:DSb1zdydvEWM1RQ8uRwOJ7dX6AE9606 rigid:arzo3ovF4ZwlmJBGKatYntV/TPs true - sufficient binding region:74-434 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q59EK9-3 uniprotkb:A0A0S2Z4E5 intact:EBI-11957366|ensembl:ENSP00000225441 intact:EBI-16432288 psi-mi:q59ek9-3(display_long)|uniprotkb:RUNDC3A(gene name)|psi-mi:RUNDC3A(display_short)|uniprotkb:RAP2IP(gene name synonym)|uniprotkb:RPIP8(gene name synonym)|uniprotkb:Rap2-interacting protein 8(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474477 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000108309(gene)|ensembl:ENST00000225441(transcript)|intact:EBI-747225(isoform-parent)|uniprotkb:Q59EK9-3(isoform-parent)|entrezgene/locuslink:10900(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16434527(see-also)|intact:EBI-16434539(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:KM1XwGq52oeYft6Ywt8DsEdrsE49606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:4/giA48KAix4up6LAK6oX0dtUgk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IX15-3 uniprotkb:A0A0S2Z4E5 intact:EBI-10172004|ensembl:ENSP00000453979 intact:EBI-16432288 psi-mi:q8ix15-3(display_long)|uniprotkb:HOMEZ(gene name)|psi-mi:HOMEZ(display_short)|uniprotkb:Homeodomain leucine zipper-containing factor(gene name synonym)|uniprotkb:KIAA1443(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474458 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10742083(isoform-parent)|ensembl:ENSG00000215271(gene)|ensembl:ENST00000561013(transcript)|entrezgene/locuslink:57594(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16431540(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M8cGyd/inWQJqBNkUtEfmFNDDoA9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:eKQykkdjSsLLfWGtNxicRaV5lGo true sufficient binding region:27-552 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IX15-3 uniprotkb:A0A0S2Z4F2 intact:EBI-10172004|ensembl:ENSP00000453979 intact:EBI-16429215 psi-mi:q8ix15-3(display_long)|uniprotkb:HOMEZ(gene name)|psi-mi:HOMEZ(display_short)|uniprotkb:Homeodomain leucine zipper-containing factor(gene name synonym)|uniprotkb:KIAA1443(gene name synonym) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474439 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10742083(isoform-parent)|ensembl:ENSG00000215271(gene)|ensembl:ENST00000561013(transcript)|entrezgene/locuslink:57594(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16431540(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M8cGyd/inWQJqBNkUtEfmFNDDoA9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:pGudwovWrjP0v1qaFgPYK8Kb1Ow true sufficient binding region:27-552 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N1B4 uniprotkb:A0A0S2Z4E5 intact:EBI-2799833|ensembl:ENSP00000372697|ensembl:ENSP00000390831|ensembl:ENSP00000391197|ensembl:ENSP00000404016|ensembl:ENSP00000406988|ensembl:ENSP00000409952|uniprotkb:B4DNI9|uniprotkb:Q9NPT5|uniprotkb:Q8IUN6|uniprotkb:Q5JPA0|uniprotkb:Q53GR4|uniprotkb:Q5SQW1|uniprotkb:B0UZZ4|uniprotkb:A2BF38 intact:EBI-16432288 psi-mi:vps52_human(display_long)|uniprotkb:SACM2L(gene name synonym)|uniprotkb:SAC2 suppressor of actin mutations 2-like protein(gene name synonym)|uniprotkb:VPS52(gene name)|psi-mi:VPS52(display_short) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474423 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000223501(gene)|ensembl:ENSG00000224455(gene)|ensembl:ENSG00000225590(gene)|ensembl:ENSG00000228425(gene)|ensembl:ENSG00000236014(gene)|ensembl:ENST00000383210(transcript)|ensembl:ENST00000428608(transcript)|ensembl:ENST00000441058(transcript)|ensembl:ENST00000443860(transcript)|ensembl:ENST00000445902(transcript)|ensembl:ENST00000448042(transcript)|go:"GO:0000938"(GARP complex)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006896"(Golgi to vacuole transport)|go:"GO:0007041"(lysosomal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010668"(ectodermal cell differentiation)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019905"(syntaxin binding)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048611"(embryonic ectodermal digestive tract development)|go:"GO:0055037"(recycling endosome)|go:"GO:1990745"(EARP complex)|interpro:IPR007258(Vps52/Sac2)|reactome:R-HSA-6811440|ensembl:ENSG00000206286(gene)|refseq:NP_001276104.1|refseq:NP_072047.4|refseq:NP_001276105.1|refseq:XP_016866667.1|dip:DIP-57843N|entrezgene/locuslink:6293(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430897(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fMptnw5eMhxv+AzDK/+mSKrL7uY9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:gYZF+lJvCRZjD1jk6qSSa7jZohY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N1B4 uniprotkb:A0A0S2Z4F2 intact:EBI-2799833|ensembl:ENSP00000372697|ensembl:ENSP00000390831|ensembl:ENSP00000391197|ensembl:ENSP00000404016|ensembl:ENSP00000406988|ensembl:ENSP00000409952|uniprotkb:B4DNI9|uniprotkb:Q9NPT5|uniprotkb:Q8IUN6|uniprotkb:Q5JPA0|uniprotkb:Q53GR4|uniprotkb:Q5SQW1|uniprotkb:B0UZZ4|uniprotkb:A2BF38 intact:EBI-16429215 psi-mi:vps52_human(display_long)|uniprotkb:SACM2L(gene name synonym)|uniprotkb:SAC2 suppressor of actin mutations 2-like protein(gene name synonym)|uniprotkb:VPS52(gene name)|psi-mi:VPS52(display_short) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474407 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000223501(gene)|ensembl:ENSG00000224455(gene)|ensembl:ENSG00000225590(gene)|ensembl:ENSG00000228425(gene)|ensembl:ENSG00000236014(gene)|ensembl:ENST00000383210(transcript)|ensembl:ENST00000428608(transcript)|ensembl:ENST00000441058(transcript)|ensembl:ENST00000443860(transcript)|ensembl:ENST00000445902(transcript)|ensembl:ENST00000448042(transcript)|go:"GO:0000938"(GARP complex)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0006896"(Golgi to vacuole transport)|go:"GO:0007041"(lysosomal transport)|go:"GO:0010008"(endosome membrane)|go:"GO:0010668"(ectodermal cell differentiation)|go:"GO:0015031"(protein transport)|go:"GO:0016020"(membrane)|go:"GO:0019905"(syntaxin binding)|go:"GO:0032456"(endocytic recycling)|go:"GO:0032588"(trans-Golgi network membrane)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048611"(embryonic ectodermal digestive tract development)|go:"GO:0055037"(recycling endosome)|go:"GO:1990745"(EARP complex)|interpro:IPR007258(Vps52/Sac2)|reactome:R-HSA-6811440|ensembl:ENSG00000206286(gene)|refseq:NP_001276104.1|refseq:NP_072047.4|refseq:NP_001276105.1|refseq:XP_016866667.1|dip:DIP-57843N|entrezgene/locuslink:6293(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430897(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:fMptnw5eMhxv+AzDK/+mSKrL7uY9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:QVeTek1yNAzu2uahVTzex68k6Z4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13077 uniprotkb:A0A0S2Z4E5 intact:EBI-359224|uniprotkb:Q658U1|uniprotkb:Q8NF13|uniprotkb:B4DJ77|ensembl:ENSP00000362994|ensembl:ENSP00000443183 intact:EBI-16432288 psi-mi:traf1_human(display_long)|uniprotkb:TRAF1(gene name)|psi-mi:TRAF1(display_short)|uniprotkb:EBI6(gene name synonym)|uniprotkb:Epstein-Barr virus-induced protein 6(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474391 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177874.1|refseq:NP_001177876.1|refseq:NP_005649.1|dip:DIP-27514N|ensembl:ENSG00000056558(gene)|ensembl:ENST00000373887(transcript)|ensembl:ENST00000540010(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:2001236"(regulation of extrinsic apoptotic signaling pathway)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR027136|interpro:IPR032070|interpro:IPR037306|interpro:IPR043211|mint:Q13077|rcsb pdb:3M0D|rcsb pdb:5E1T|rcsb pdb:5H10|reactome:R-HSA-5357905|reactome:R-HSA-5357956|entrezgene/locuslink:7185(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430833(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:D51RV1gTNQQjGP978+uv98Hd3Lc9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:7Z/E9Nq+ZayfyPhe5vxk1vAg6W0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13077 uniprotkb:A0A0S2Z4F2 intact:EBI-359224|uniprotkb:Q658U1|uniprotkb:Q8NF13|uniprotkb:B4DJ77|ensembl:ENSP00000362994|ensembl:ENSP00000443183 intact:EBI-16429215 psi-mi:traf1_human(display_long)|uniprotkb:TRAF1(gene name)|psi-mi:TRAF1(display_short)|uniprotkb:EBI6(gene name synonym)|uniprotkb:Epstein-Barr virus-induced protein 6(gene name synonym) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474375 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177874.1|refseq:NP_001177876.1|refseq:NP_005649.1|dip:DIP-27514N|ensembl:ENSG00000056558(gene)|ensembl:ENST00000373887(transcript)|ensembl:ENST00000540010(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:2001236"(regulation of extrinsic apoptotic signaling pathway)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR027136|interpro:IPR032070|interpro:IPR037306|interpro:IPR043211|mint:Q13077|rcsb pdb:3M0D|rcsb pdb:5E1T|rcsb pdb:5H10|reactome:R-HSA-5357905|reactome:R-HSA-5357956|entrezgene/locuslink:7185(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430833(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:D51RV1gTNQQjGP978+uv98Hd3Lc9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:TbloL6KVdY/cHhkYjicUjHSenuA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z4E5 - intact:EBI-16432288 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474359 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430660(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:9m0vty/XdtQQKCxHj6gXzJKDVo4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z4F2 - intact:EBI-16429215 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474343 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16430660(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:jIdyl8cDQiZUY/G8ce12XqoScYk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z4E5 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16432288 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474327 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16429947(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:qZQcuFygKbrzwDrWf6Dr1ZjvNFg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z4F2 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16429215 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474311 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16429947(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:b+SLibk/KTH66WNZnAyrfMmG/FA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:A0A0S2Z4E5 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-16432288 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474294 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16429203(see-also)|intact:EBI-16429217(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:d9rkrGrlqzsnkxCFhth2gGO0ZjE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96DZ9-2 uniprotkb:A0A0S2Z511 intact:EBI-11522780|ensembl:ENSP00000352270|ensembl:ENSP00000497215 intact:EBI-16474234 psi-mi:q96dz9-2(display_long)|uniprotkb:CMTM5(gene name)|psi-mi:CMTM5(display_short)|uniprotkb:CKLFSF5(gene name synonym)|uniprotkb:Chemokine-like factor superfamily member 5(gene name synonym) psi-mi:a0a0s2z511_human(display_long)|uniprotkb:SUCLA2(gene name)|psi-mi:SUCLA2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474278 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166091(gene)|ensembl:ENST00000359320(transcript)|ensembl:ENST00000649278(transcript)|intact:EBI-2548702(isoform-parent)|uniprotkb:Q96DZ9-2(isoform-parent)|entrezgene/locuslink:116173(identity) go:"GO:0000166"(nucleotide binding)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0016874"(ligase activity)|interpro:IPR013650(ATP-grasp fold, succinyl-CoA synthetase-type)|interpro:IPR005811(ATP-citrate lyase/succinyl-CoA ligase)|interpro:IPR017866|interpro:IPR005809(Succinyl-CoA synthetase, beta subunit)|interpro:IPR016102(Succinyl-CoA synthetase-like)|entrezgene/locuslink:8803(identity) intact:EBI-16440044(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2TJ7rZKQNb5hH5gz9i+ujOEOIOg9606 rogid:HWHnBEzhPqGDot2oEDnj/1wEcf49606 rigid:ZoDhhl3GA5scdWNTnqp2m4dMHh0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:A0A0S2Z511 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-16474234 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:a0a0s2z511_human(display_long)|uniprotkb:SUCLA2(gene name)|psi-mi:SUCLA2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474262 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) go:"GO:0000166"(nucleotide binding)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0016874"(ligase activity)|interpro:IPR013650(ATP-grasp fold, succinyl-CoA synthetase-type)|interpro:IPR005811(ATP-citrate lyase/succinyl-CoA ligase)|interpro:IPR017866|interpro:IPR005809(Succinyl-CoA synthetase, beta subunit)|interpro:IPR016102(Succinyl-CoA synthetase-like)|entrezgene/locuslink:8803(identity) intact:EBI-16439154(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:HWHnBEzhPqGDot2oEDnj/1wEcf49606 rigid:VKpBZfOOkbuSd8E6N4VBzyDxkbo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15041 uniprotkb:A0A0S2Z511 intact:EBI-714543|ensembl:ENSP00000306788|uniprotkb:B7Z6S5|uniprotkb:B7Z791|uniprotkb:F5GXP4 intact:EBI-16474234 psi-mi:ar6p1_human(display_long)|uniprotkb:ARL6IP(gene name synonym)|uniprotkb:ARL6IP1(gene name)|psi-mi:ARL6IP1(display_short)|uniprotkb:KIAA0069(gene name synonym)|uniprotkb:ARMER(gene name synonym)|uniprotkb:Apoptotic regulator in the membrane of the endoplasmic reticulum(gene name synonym) psi-mi:a0a0s2z511_human(display_long)|uniprotkb:SUCLA2(gene name)|psi-mi:SUCLA2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474246 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055976.1|ensembl:ENSG00000170540(gene)|ensembl:ENST00000304414(transcript)|go:"GO:0005784"(Sec61 translocon complex)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006613"(cotranslational protein targeting to membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0071787"(endoplasmic reticulum tubular network formation)|go:"GO:1903371"(regulation of endoplasmic reticulum tubular network organization)|go:"GO:1990809"(endoplasmic reticulum tubular network membrane organization)|interpro:IPR033301|mint:Q15041|go:"GO:0002038"(positive regulation of L-glutamate import across plasma membrane)|refseq:NP_001300787.1|entrezgene/locuslink:23204(identity) go:"GO:0000166"(nucleotide binding)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0016874"(ligase activity)|interpro:IPR013650(ATP-grasp fold, succinyl-CoA synthetase-type)|interpro:IPR005811(ATP-citrate lyase/succinyl-CoA ligase)|interpro:IPR017866|interpro:IPR005809(Succinyl-CoA synthetase, beta subunit)|interpro:IPR016102(Succinyl-CoA synthetase-like)|entrezgene/locuslink:8803(identity) intact:EBI-16432904(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3fjkoyvUx25po7xsPcXgpjEeLJg9606 rogid:HWHnBEzhPqGDot2oEDnj/1wEcf49606 rigid:+EPk1Rz5UUzWkWGu6DZ4pqJ1A3w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:O00506-2 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16474172|ensembl:ENSP00000384444|ensembl:ENSP00000385541 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:o00506-2(display_long)|uniprotkb:Ste20-like kinase(gene name synonym)|uniprotkb:Sterile 20/oxidant stress-response kinase 1(gene name synonym)|uniprotkb:STK25(gene name)|psi-mi:STK25(display_short)|uniprotkb:SOK1(gene name synonym)|uniprotkb:YSK1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474215 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) ensembl:ENSG00000115694(gene)|ensembl:ENST00000405585(transcript)|ensembl:ENST00000405883(transcript)|intact:EBI-618295(isoform-parent)|entrezgene/locuslink:10494(identity) intact:EBI-16431986(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:pwb8CAj6GQUnAHoo11bcPTR91IM9606 rigid:ada10D0vs6KmRZXt48GiUbcuSgM true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z503 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16474153 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z503_human(display_long)|uniprotkb:STK25(gene name)|psi-mi:STK25(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474196 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|entrezgene/locuslink:10494(identity) intact:EBI-16431986(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:tvI0cMppiIA52VqBLfnbNVmtGDk9606 rigid:s9BgdiT+YbugS65tUAcUxG9k1SM true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:A0A0S2Z503 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16474153 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:a0a0s2z503_human(display_long)|uniprotkb:STK25(gene name)|psi-mi:STK25(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474156 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|entrezgene/locuslink:10494(identity) intact:EBI-16429937(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:tvI0cMppiIA52VqBLfnbNVmtGDk9606 rigid:ZB5ecBUUkZlld1C59/9+pEsgfxo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:O00506-2 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-16474172|ensembl:ENSP00000384444|ensembl:ENSP00000385541 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:o00506-2(display_long)|uniprotkb:Ste20-like kinase(gene name synonym)|uniprotkb:Sterile 20/oxidant stress-response kinase 1(gene name synonym)|uniprotkb:STK25(gene name)|psi-mi:STK25(display_short)|uniprotkb:SOK1(gene name synonym)|uniprotkb:YSK1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474180 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) ensembl:ENSG00000115694(gene)|ensembl:ENST00000405585(transcript)|ensembl:ENST00000405883(transcript)|intact:EBI-618295(isoform-parent)|entrezgene/locuslink:10494(identity) intact:EBI-16429937(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:pwb8CAj6GQUnAHoo11bcPTR91IM9606 rigid:ynmpe821OEJySWD5QvOQH0f+bRw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q00013 uniprotkb:O75494 intact:EBI-711788|uniprotkb:B4DZV5|uniprotkb:Q5J7V5|uniprotkb:G3XAI1|uniprotkb:Q2TSB6|ensembl:ENSP00000358547 intact:EBI-353655|uniprotkb:Q5JRI3|uniprotkb:Q5JRI4|uniprotkb:A6NFM6|uniprotkb:A6NI42|uniprotkb:A6NIU7|uniprotkb:Q5JRH9|uniprotkb:Q5JRI2|uniprotkb:O60572|uniprotkb:Q96G09|uniprotkb:Q96P17|uniprotkb:Q5JRI0|intact:EBI-11103259|ensembl:ENSP00000420195|uniprotkb:B4DJP9 psi-mi:em55_human(display_long)|uniprotkb:Membrane protein, palmitoylated 1(gene name synonym)|uniprotkb:MPP1(gene name)|psi-mi:MPP1(display_short)|uniprotkb:EMP55(gene name synonym)|uniprotkb:DXS552E(gene name synonym) psi-mi:srs10_human(display_long)|uniprotkb:FUSIP1(gene name synonym)|uniprotkb:TASR(gene name synonym)|uniprotkb:FUS-interacting serine-arginine-rich protein 1(gene name synonym)|uniprotkb:FUSIP2(gene name synonym)|uniprotkb:TLS-associated protein with Ser-Arg repeats(gene name synonym)|uniprotkb:TLS-associated serine-arginine protein(gene name synonym)|uniprotkb:40 kDa SR-repressor protein(gene name synonym)|uniprotkb:SRSF10(gene name)|psi-mi:SRSF10(display_short)|uniprotkb:Splicing factor SRp38(gene name synonym)|uniprotkb:SFRS13A(gene name synonym)|uniprotkb:Splicing factor, arginine/serine-rich 13A(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474137 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159932.1|refseq:NP_001159933.1|refseq:NP_001159934.1|refseq:NP_002427.1|ensembl:ENSG00000130830(gene)|ensembl:ENST00000369534(transcript)|go:"GO:0004385"(guanylate kinase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0007165"(signal transduction)|go:"GO:0016020"(membrane)|go:"GO:0030863"(cortical cytoskeleton)|go:"GO:0032420"(stereocilium)|go:"GO:0034451"(centriolar satellite)|go:"GO:0090022"(regulation of neutrophil chemotaxis)|interpro:IPR001452(Src homology-3)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR008144(Guanylate kinase)|interpro:IPR008145(Guanylate kinase/L-type calcium channel region)|interpro:IPR020590|interpro:IPR027417|interpro:IPR035475|interpro:IPR036028|interpro:IPR036034|mint:Q00013|rcsb pdb:2EJY|rcsb pdb:2EV8|rcsb pdb:3NEY|reactome:R-HSA-9662361|entrezgene/locuslink:4354(identity) refseq:NP_001177936.1|refseq:NP_001177934.1|refseq:NP_001177935.1|refseq:NP_006616.1|refseq:NP_473357.1|ensembl:ENSG00000188529(gene)|ensembl:ENST00000492112(transcript)|go:"GO:0000244"(spliceosomal tri-snRNP complex assembly)|go:"GO:0000375"(RNA splicing, via transesterification reactions)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006376"(mRNA splice site selection)|go:"GO:0016482"(cytosolic transport)|go:"GO:0016607"(nuclear speck)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0050733"(RS domain binding)|go:"GO:0051082"(unfolded protein binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034476|interpro:IPR035979|mint:O75494|reactome:R-HSA-72163|refseq:NP_001177938.1|entrezgene/locuslink:10772(identity) intact:EBI-16433466(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:b9QmIlmQ5SZHnOQfGSezmcvaDls9606 rogid:abrRZLYWl3wlG2rHzVZMgej5EWk9606 rigid:rhiG6mhrXwlZbpF+HggFdX+Op2w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P12757 uniprotkb:Q53HV7-2 intact:EBI-2902468|uniprotkb:A6NGT1|uniprotkb:O00464|uniprotkb:P12756|uniprotkb:Q07501|uniprotkb:B4DT50|ensembl:ENSP00000259119|ensembl:ENSP00000415243 intact:EBI-12275818|ensembl:ENSP00000243112|ensembl:ENSP00000421139|ensembl:ENSP00000421206|ensembl:ENSP00000423629 psi-mi:skil_human(display_long)|uniprotkb:SKIL(gene name)|psi-mi:SKIL(display_short)|uniprotkb:SNO(gene name synonym)|uniprotkb:Ski-related protein(gene name synonym)|uniprotkb:Ski-related oncogene(gene name synonym) psi-mi:q53hv7-2(display_long)|uniprotkb:SMUG1(gene name)|psi-mi:SMUG1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474121 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001138569.1|refseq:NP_001138570.1|refseq:NP_005405.2|refseq:NP_001234937.1|refseq:XP_005247778.1|ensembl:ENSG00000136603(gene)|ensembl:ENST00000259119(transcript)|ensembl:ENST00000458537(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0001669"(acrosomal vesicle)|go:"GO:0001825"(blastocyst formation)|go:"GO:0002260"(lymphocyte homeostasis)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005667"(transcription regulator complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0007179"(transforming growth factor beta receptor signaling pathway)|go:"GO:0007283"(spermatogenesis)|go:"GO:0007519"(skeletal muscle tissue development)|go:"GO:0016605"(PML body)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0030512"(negative regulation of transforming growth factor beta receptor signaling pathway)|go:"GO:0030514"(negative regulation of BMP signaling pathway)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034097"(response to cytokine)|go:"GO:0042802"(identical protein binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045596"(negative regulation of cell differentiation)|go:"GO:0046332"(SMAD binding)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050772"(positive regulation of axonogenesis)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0070306"(lens fiber cell differentiation)|go:"GO:0070848"(response to growth factor)|go:"GO:1902043"(positive regulation of extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:1902231"(positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage)|interpro:IPR003380(Transforming protein Ski)|interpro:IPR009061(Putative DNA binding)|interpro:IPR010919(SAND-like)|interpro:IPR014890(c-SKI Smad4 binding)|interpro:IPR023216|interpro:IPR028373|interpro:IPR037000|rcsb pdb:3EQ5|rcsb pdb:5C4V|reactome:R-HSA-2173795|refseq:XP_006713798.1|dip:DIP-42138N|entrezgene/locuslink:6498(identity) uniprotkb:Q53HV7-2(isoform-parent)|intact:EBI-749970(isoform-parent)|ensembl:ENSG00000123415(gene)|ensembl:ENST00000243112(transcript)|ensembl:ENST00000506595(transcript)|ensembl:ENST00000513838(transcript)|ensembl:ENST00000514685(transcript)|uniprotkb:Q53HV7(isoform-parent)|entrezgene/locuslink:23583(identity) intact:EBI-16429664(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CktHHQJKOG+DaY5zwy1U+2YeTmw9606 rogid:m1cNtgPOvISKrGW4fehXpyQZRrw9606 rigid:SamHd3CHkfhSOqvtd8AZg9OYfaI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJX2 uniprotkb:Q53HV7-2 intact:EBI-396137|uniprotkb:O75433|uniprotkb:Q9BS73|uniprotkb:B4E3A2|uniprotkb:B7WP05|uniprotkb:Q53FN2|uniprotkb:A8K6E5|uniprotkb:D3DQB7|ensembl:ENSP00000378350 intact:EBI-12275818|ensembl:ENSP00000243112|ensembl:ENSP00000421139|ensembl:ENSP00000421206|ensembl:ENSP00000423629 psi-mi:cdc23_human(display_long)|uniprotkb:CDC23(gene name)|psi-mi:CDC23(display_short)|uniprotkb:ANAPC8(gene name synonym)|uniprotkb:Anaphase-promoting complex subunit 8(gene name synonym)|uniprotkb:Cyclosome subunit 8(gene name synonym) psi-mi:q53hv7-2(display_long)|uniprotkb:SMUG1(gene name)|psi-mi:SMUG1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474102 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004652.2|dip:DIP-32959N|ensembl:ENSG00000094880(gene)|ensembl:ENST00000394886(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005680"(anaphase-promoting complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007080"(mitotic metaphase plate congression)|go:"GO:0007091"(metaphase/anaphase transition of mitotic cell cycle)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0030071"(regulation of mitotic metaphase/anaphase transition)|go:"GO:0031145"(anaphase-promoting complex-dependent catabolic process)|go:"GO:0045842"(positive regulation of mitotic metaphase/anaphase transition)|go:"GO:0051301"(cell division)|go:"GO:0070979"(protein K11-linked ubiquitination)|interpro:IPR007192(Cdc23)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|mint:Q9UJX2|rcsb pdb:4UI9|rcsb pdb:5A31|rcsb pdb:5G04|rcsb pdb:5G05|rcsb pdb:5KHR|rcsb pdb:5KHU|rcsb pdb:5L9T|rcsb pdb:5L9U|rcsb pdb:5LCW|rcsb pdb:6Q6G|rcsb pdb:6Q6H|rcsb pdb:6TLJ|rcsb pdb:6TM5|rcsb pdb:6TNT|reactome:R-HSA-141430|reactome:R-HSA-174048|reactome:R-HSA-174084|reactome:R-HSA-174154|reactome:R-HSA-174178|reactome:R-HSA-174184|reactome:R-HSA-176407|reactome:R-HSA-176408|reactome:R-HSA-176409|reactome:R-HSA-176412|reactome:R-HSA-179409|reactome:R-HSA-2467813|reactome:R-HSA-2559582|reactome:R-HSA-69017|reactome:R-HSA-8853884|reactome:R-HSA-9687136|reactome:R-HSA-983168|entrezgene/locuslink:8697(identity) uniprotkb:Q53HV7-2(isoform-parent)|intact:EBI-749970(isoform-parent)|ensembl:ENSG00000123415(gene)|ensembl:ENST00000243112(transcript)|ensembl:ENST00000506595(transcript)|ensembl:ENST00000513838(transcript)|ensembl:ENST00000514685(transcript)|uniprotkb:Q53HV7(isoform-parent)|entrezgene/locuslink:23583(identity) intact:EBI-16429123(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:uTZL2UHzZHLoKnio/1LcuSzZpW09606 rogid:m1cNtgPOvISKrGW4fehXpyQZRrw9606 rigid:M2FVQbV3Ne8s8FbTB0r5hIJMwA4 true sufficient binding region:7-597 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:A0A0S2Z3I3 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-16474045 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:a0a0s2z3i3_human(display_long)|uniprotkb:SLC25A10(gene name)|psi-mi:SLC25A10(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474086 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR018108|interpro:IPR023395|entrezgene/locuslink:1468(identity) intact:EBI-16435174(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:FisbtsXIhWmngIvwcYU9gLLuTwM9606 rigid:n0I1bK9llI+wGGq40vTV9PRROQY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:Q9UBX3 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-750394|uniprotkb:Q96BA1|uniprotkb:Q96IP1|uniprotkb:Q542Z3|ensembl:ENSP00000345580 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:dic_human(display_long)|uniprotkb:Solute carrier family 25 member 10(gene name synonym)|uniprotkb:SLC25A10(gene name)|psi-mi:SLC25A10(display_short)|uniprotkb:DIC(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474070 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) refseq:NP_036272.2|refseq:NP_001257817.1|refseq:NP_001257882.1|go:"GO:0015131"(oxaloacetate transmembrane transporter activity)|go:"GO:0015140"(malate transmembrane transporter activity)|go:"GO:0015141"(succinate transmembrane transporter activity)|go:"GO:0015297"(antiporter activity)|go:"GO:0015709"(thiosulfate transport)|go:"GO:0015729"(oxaloacetate transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:0070221"("sulfide oxidation, using sulfide:quinone oxidoreductase")|go:"GO:0071422"(succinate transmembrane transport)|ensembl:ENSG00000183048(gene)|ensembl:ENST00000350690(transcript)|go:"GO:0005310"(dicarboxylic acid transmembrane transporter activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006811"(ion transport)|go:"GO:0006835"(dicarboxylic acid transport)|go:"GO:0006839"(mitochondrial transport)|go:"GO:0008272"(sulfate transport)|go:"GO:0015116"(sulfate transmembrane transporter activity)|go:"GO:0015117"(thiosulfate transmembrane transporter activity)|reactome:R-HSA-70263|go:"GO:0071423"(malate transmembrane transport)|interpro:IPR002030(Mitochondrial brown fat uncoupling protein)|interpro:IPR018108|interpro:IPR023395|mint:Q9UBX3|reactome:R-HSA-1614517|reactome:R-HSA-428643|entrezgene/locuslink:1468(identity) intact:EBI-16435174(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:Z9a7UxJbOLZqoCyz+5L+mbkXFqk9606 rigid:Ld3t/lXV+Iil7z3Vet3JzPctoiM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P26371 uniprotkb:A0A0S2Z3I3 intact:EBI-3958099|ensembl:ENSP00000431443|uniprotkb:Q14564|uniprotkb:Q3MIP8 intact:EBI-16474045 psi-mi:kra59_human(display_long)|uniprotkb:KRTAP5-9(gene name)|psi-mi:KRTAP5-9(display_short)|uniprotkb:KAP5.9(gene name synonym)|uniprotkb:KRN1(gene name synonym)|uniprotkb:KRTAP5.9(gene name synonym)|uniprotkb:UHSK1(gene name synonym)|uniprotkb:Keratin, cuticle, ultrahigh sulfur 1(gene name synonym)|uniprotkb:Keratin, ultra high-sulfur matrix protein A(gene name synonym)|uniprotkb:Keratin-associated protein 5.9(gene name synonym)|uniprotkb:UHS keratin A(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 5.9(gene name synonym) psi-mi:a0a0s2z3i3_human(display_long)|uniprotkb:SLC25A10(gene name)|psi-mi:SLC25A10(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474054 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000254997(gene)|ensembl:ENST00000528743(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008544"(epidermis development)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|mint:P26371|reactome:R-HSA-6805567|refseq:NP_005544.4|entrezgene/locuslink:3846(identity) go:"GO:0016021"(integral component of membrane)|interpro:IPR018108|interpro:IPR023395|entrezgene/locuslink:1468(identity) intact:EBI-16431297(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:B6s6+/WKO8MfrhEgj4xz7BH/jqE9606 rogid:FisbtsXIhWmngIvwcYU9gLLuTwM9606 rigid:3B170fxEebUlWjYENXFBKQCd3Dc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P26371 uniprotkb:Q9UBX3 intact:EBI-3958099|ensembl:ENSP00000431443|uniprotkb:Q14564|uniprotkb:Q3MIP8 intact:EBI-750394|uniprotkb:Q96BA1|uniprotkb:Q96IP1|uniprotkb:Q542Z3|ensembl:ENSP00000345580 psi-mi:kra59_human(display_long)|uniprotkb:KRTAP5-9(gene name)|psi-mi:KRTAP5-9(display_short)|uniprotkb:KAP5.9(gene name synonym)|uniprotkb:KRN1(gene name synonym)|uniprotkb:KRTAP5.9(gene name synonym)|uniprotkb:UHSK1(gene name synonym)|uniprotkb:Keratin, cuticle, ultrahigh sulfur 1(gene name synonym)|uniprotkb:Keratin, ultra high-sulfur matrix protein A(gene name synonym)|uniprotkb:Keratin-associated protein 5.9(gene name synonym)|uniprotkb:UHS keratin A(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 5.9(gene name synonym) psi-mi:dic_human(display_long)|uniprotkb:Solute carrier family 25 member 10(gene name synonym)|uniprotkb:SLC25A10(gene name)|psi-mi:SLC25A10(display_short)|uniprotkb:DIC(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474029 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000254997(gene)|ensembl:ENST00000528743(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008544"(epidermis development)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|mint:P26371|reactome:R-HSA-6805567|refseq:NP_005544.4|entrezgene/locuslink:3846(identity) refseq:NP_036272.2|refseq:NP_001257817.1|refseq:NP_001257882.1|go:"GO:0015131"(oxaloacetate transmembrane transporter activity)|go:"GO:0015140"(malate transmembrane transporter activity)|go:"GO:0015141"(succinate transmembrane transporter activity)|go:"GO:0015297"(antiporter activity)|go:"GO:0015709"(thiosulfate transport)|go:"GO:0015729"(oxaloacetate transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0035435"(phosphate ion transmembrane transport)|go:"GO:0070221"("sulfide oxidation, using sulfide:quinone oxidoreductase")|go:"GO:0071422"(succinate transmembrane transport)|ensembl:ENSG00000183048(gene)|ensembl:ENST00000350690(transcript)|go:"GO:0005310"(dicarboxylic acid transmembrane transporter activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0006094"(gluconeogenesis)|go:"GO:0006811"(ion transport)|go:"GO:0006835"(dicarboxylic acid transport)|go:"GO:0006839"(mitochondrial transport)|go:"GO:0008272"(sulfate transport)|go:"GO:0015116"(sulfate transmembrane transporter activity)|go:"GO:0015117"(thiosulfate transmembrane transporter activity)|reactome:R-HSA-70263|go:"GO:0071423"(malate transmembrane transport)|interpro:IPR002030(Mitochondrial brown fat uncoupling protein)|interpro:IPR018108|interpro:IPR023395|mint:Q9UBX3|reactome:R-HSA-1614517|reactome:R-HSA-428643|entrezgene/locuslink:1468(identity) intact:EBI-16431297(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:B6s6+/WKO8MfrhEgj4xz7BH/jqE9606 rogid:Z9a7UxJbOLZqoCyz+5L+mbkXFqk9606 rigid:6ys05+5fCYjheBxSzCOSNXp612U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96DZ9-2 intact:EBI-16473978 intact:EBI-11522780|ensembl:ENSP00000352270|ensembl:ENSP00000497215 - psi-mi:q96dz9-2(display_long)|uniprotkb:CMTM5(gene name)|psi-mi:CMTM5(display_short)|uniprotkb:CKLFSF5(gene name synonym)|uniprotkb:Chemokine-like factor superfamily member 5(gene name synonym) psi-mi:"ccsb isoform id: shmt2_2"(display_short)|psi-mi:EBI-16473978(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474013 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000166091(gene)|ensembl:ENST00000359320(transcript)|ensembl:ENST00000649278(transcript)|intact:EBI-2548702(isoform-parent)|uniprotkb:Q96DZ9-2(isoform-parent)|entrezgene/locuslink:116173(identity) entrezgene/locuslink:6472(identity) intact:EBI-16440034(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2TJ7rZKQNb5hH5gz9i+ujOEOIOg9606 rogid:w1DYwSuUWWCqD/w2TqGF3jPNAws9606 rigid:9/k/y6HP4Vf4qZWs+v9PrgSSDkc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969L2 intact:EBI-16473978 intact:EBI-944295|uniprotkb:Q6ZMD9|uniprotkb:B2R520|ensembl:ENSP00000479708 - psi-mi:mal2_human(display_long)|uniprotkb:MAL2(gene name)|psi-mi:MAL2(display_short) psi-mi:"ccsb isoform id: shmt2_2"(display_short)|psi-mi:EBI-16473978(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473997 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_443118.1|ensembl:ENSG00000147676(gene)|ensembl:ENST00000614891(transcript)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0042552"(myelination)|go:"GO:0045056"(transcytosis)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070062"(extracellular exosome)|interpro:IPR008253(Marvel)|interpro:IPR013295("Myelin and lymphocyte (MAL)")|interpro:IPR033240|entrezgene/locuslink:114569(identity) entrezgene/locuslink:6472(identity) intact:EBI-16437285(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7SApzrGTzj8V3GIwkdO0X/z6geg9606 rogid:w1DYwSuUWWCqD/w2TqGF3jPNAws9606 rigid:t022CSVW7dkPY0AY5mixkNGVF6k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15041 intact:EBI-16473978 intact:EBI-714543|ensembl:ENSP00000306788|uniprotkb:B7Z6S5|uniprotkb:B7Z791|uniprotkb:F5GXP4 - psi-mi:ar6p1_human(display_long)|uniprotkb:ARL6IP(gene name synonym)|uniprotkb:ARL6IP1(gene name)|psi-mi:ARL6IP1(display_short)|uniprotkb:KIAA0069(gene name synonym)|uniprotkb:ARMER(gene name synonym)|uniprotkb:Apoptotic regulator in the membrane of the endoplasmic reticulum(gene name synonym) psi-mi:"ccsb isoform id: shmt2_2"(display_short)|psi-mi:EBI-16473978(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473981 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_055976.1|ensembl:ENSG00000170540(gene)|ensembl:ENST00000304414(transcript)|go:"GO:0005784"(Sec61 translocon complex)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006613"(cotranslational protein targeting to membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030176"(integral component of endoplasmic reticulum membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0043154"(negative regulation of cysteine-type endopeptidase activity involved in apoptotic process)|go:"GO:0071787"(endoplasmic reticulum tubular network formation)|go:"GO:1903371"(regulation of endoplasmic reticulum tubular network organization)|go:"GO:1990809"(endoplasmic reticulum tubular network membrane organization)|interpro:IPR033301|mint:Q15041|go:"GO:0002038"(positive regulation of L-glutamate import across plasma membrane)|refseq:NP_001300787.1|entrezgene/locuslink:23204(identity) entrezgene/locuslink:6472(identity) intact:EBI-16432894(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3fjkoyvUx25po7xsPcXgpjEeLJg9606 rogid:w1DYwSuUWWCqD/w2TqGF3jPNAws9606 rigid:97WVEXwq2wi+PFFoa+IQ9csMnP4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRI3 uniprotkb:A0A0S2Z333 intact:EBI-8644112|ensembl:ENSP00000363396|intact:MINT-8163383|uniprotkb:Q71RC8 intact:EBI-16473949 psi-mi:znt2_human(display_long)|uniprotkb:SLC30A2(gene name)|psi-mi:SLC30A2(display_short)|uniprotkb:Solute carrier family 30 member 2(gene name synonym)|uniprotkb:ZNT2(gene name synonym) psi-mi:a0a0s2z333_human(display_long)|uniprotkb:SERPING1(gene name)|psi-mi:SERPING1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473962 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158014(gene)|ensembl:ENST00000374278(transcript)|go:"GO:0005385"(zinc ion transmembrane transporter activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0010043"(response to zinc ion)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0061090"(positive regulation of sequestering of zinc ion)|go:"GO:0071577"(zinc ion transmembrane transport)|interpro:IPR002524(Cation efflux protein)|interpro:IPR027469|interpro:IPR036837|reactome:R-HSA-435368|refseq:NP_001004434.1|refseq:NP_115902.1|entrezgene/locuslink:7780(identity) go:"GO:0004867"(serine-type endopeptidase inhibitor activity)|go:"GO:0005615"(extracellular space)|go:"GO:0030193"(regulation of blood coagulation)|go:"GO:0045916"(negative regulation of complement activation)|interpro:IPR015553(Protease inhibitor I4, serpin C1)|interpro:IPR023795|interpro:IPR023796|interpro:IPR000215(Protease inhibitor I4, serpin)|interpro:IPR036186|entrezgene/locuslink:710(identity) intact:EBI-16434943(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E8UyE30F1s0H0A4awhgqZ6MIEuU9606 rogid:1jC9AiVsX+YrqhHm6Iui/gFSeMQ9606 rigid:CTrhJ+M02FMnL7B3BmJVoMUFp/o true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BRI3 uniprotkb:P05155 intact:EBI-8644112|ensembl:ENSP00000363396|intact:MINT-8163383|uniprotkb:Q71RC8 intact:EBI-1223454|uniprotkb:Q547W3|uniprotkb:Q59EI5|uniprotkb:Q96FE0|uniprotkb:A6NMU0|uniprotkb:A8KAI9|uniprotkb:B2R6L5|uniprotkb:Q16304|uniprotkb:Q7Z455|uniprotkb:Q9UC49|uniprotkb:Q9UCF9|uniprotkb:B4E1F0|uniprotkb:B4E1H2|ensembl:ENSP00000278407|ensembl:ENSP00000504807 psi-mi:znt2_human(display_long)|uniprotkb:SLC30A2(gene name)|psi-mi:SLC30A2(display_short)|uniprotkb:Solute carrier family 30 member 2(gene name synonym)|uniprotkb:ZNT2(gene name synonym) psi-mi:ic1_human(display_long)|uniprotkb:SERPING1(gene name)|psi-mi:SERPING1(display_short)|uniprotkb:C1IN(gene name synonym)|uniprotkb:C1NH(gene name synonym)|uniprotkb:C1 esterase inhibitor(gene name synonym)|uniprotkb:C1-inhibiting factor(gene name synonym)|uniprotkb:Serpin G1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473933 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158014(gene)|ensembl:ENST00000374278(transcript)|go:"GO:0005385"(zinc ion transmembrane transporter activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005770"(late endosome)|go:"GO:0005886"(plasma membrane)|go:"GO:0010043"(response to zinc ion)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0061088"(regulation of sequestering of zinc ion)|go:"GO:0061090"(positive regulation of sequestering of zinc ion)|go:"GO:0071577"(zinc ion transmembrane transport)|interpro:IPR002524(Cation efflux protein)|interpro:IPR027469|interpro:IPR036837|reactome:R-HSA-435368|refseq:NP_001004434.1|refseq:NP_115902.1|entrezgene/locuslink:7780(identity) refseq:NP_000053.2|refseq:NP_001027466.1|dip:DIP-45635N|ensembl:ENSG00000149131(gene)|ensembl:ENST00000278407(transcript)|ensembl:ENST00000676670(transcript)|go:"GO:0001869"(negative regulation of complement activation, lectin pathway)|go:"GO:0004867"(serine-type endopeptidase inhibitor activity)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005788"(endoplasmic reticulum lumen)|go:"GO:0006958"(complement activation, classical pathway)|go:"GO:0007568"(aging)|go:"GO:0007596"(blood coagulation)|go:"GO:0008015"(blood circulation)|go:"GO:0010951"(negative regulation of endopeptidase activity)|go:"GO:0031093"(platelet alpha granule lumen)|go:"GO:0042730"(fibrinolysis)|go:"GO:0045087"(innate immune response)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0072562"(blood microparticle)|interpro:IPR000215(Protease inhibitor I4, serpin)|interpro:IPR015553(Protease inhibitor I4, serpin C1)|interpro:IPR023795|interpro:IPR023796|interpro:IPR036186|interpro:IPR042178|interpro:IPR042185|mint:P05155|rcsb pdb:1M6Q|rcsb pdb:2OAY|rcsb pdb:5DU3|rcsb pdb:5DUQ|rcsb pdb:7AKV|reactome:R-HSA-114608|reactome:R-HSA-140837|reactome:R-HSA-9657689|reactome:R-HSA-977606|entrezgene/locuslink:710(identity) intact:EBI-16434943(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E8UyE30F1s0H0A4awhgqZ6MIEuU9606 rogid:Y7cqCZ6Ryz51dsi6jM86EXdfeWc9606 rigid:cUaBrTAao5GFuvhyMqx42LdOvHc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969F0 uniprotkb:A0A0S2Z4S8 intact:EBI-743099|ensembl:ENSP00000359375 intact:EBI-16473914 psi-mi:fate1_human(display_long)|uniprotkb:Tumor antigen BJ-HCC-2(gene name synonym)|uniprotkb:Cancer/testis antigen 43(gene name synonym)|uniprotkb:FATE1(gene name)|psi-mi:FATE1(display_short)|uniprotkb:FATE(gene name synonym) psi-mi:a0a0s2z4s8_human(display_long)|uniprotkb:SEC22C(gene name)|psi-mi:SEC22C(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473917 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149076.1|ensembl:ENSG00000147378(gene)|ensembl:ENST00000370350(transcript)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0051562"(negative regulation of mitochondrial calcium ion concentration)|interpro:IPR039153|interpro:IPR039433|mint:Q969F0|entrezgene/locuslink:89885(identity) go:"GO:0005737"(cytoplasm)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|interpro:IPR011012(Longin-like)|interpro:IPR043546|entrezgene/locuslink:9117(identity) intact:EBI-16432558(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nm1N6lO92MHr5rIKC007oouF5RE9606 rogid:qtheyub4kGDZY6MAK9tpWjCdiHI9606 rigid:7l4spnIGyrZKKf4i9pFc89XAA+A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969F0 uniprotkb:A0A0S2Z4S0 intact:EBI-743099|ensembl:ENSP00000359375 intact:EBI-16473895 psi-mi:fate1_human(display_long)|uniprotkb:Tumor antigen BJ-HCC-2(gene name synonym)|uniprotkb:Cancer/testis antigen 43(gene name synonym)|uniprotkb:FATE1(gene name)|psi-mi:FATE1(display_short)|uniprotkb:FATE(gene name synonym) psi-mi:a0a0s2z4s0_human(display_long)|uniprotkb:SEC22C(gene name)|psi-mi:SEC22C(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473898 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149076.1|ensembl:ENSG00000147378(gene)|ensembl:ENST00000370350(transcript)|go:"GO:0005741"(mitochondrial outer membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006915"(apoptotic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0044233"(mitochondria-associated endoplasmic reticulum membrane)|go:"GO:0051562"(negative regulation of mitochondrial calcium ion concentration)|interpro:IPR039153|interpro:IPR039433|mint:Q969F0|entrezgene/locuslink:89885(identity) go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0016021"(integral component of membrane)|interpro:IPR010908(Longin)|interpro:IPR011012(Longin-like)|interpro:IPR043546|entrezgene/locuslink:9117(identity) intact:EBI-16432558(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nm1N6lO92MHr5rIKC007oouF5RE9606 rogid:8Jep7RaAGYriguPiEBULdHp3FkI9606 rigid:l2tQuoo8uhCb+kZsjX9ufHBMuAo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:D3DPN2 - intact:EBI-16473816|ensembl:ENSP00000338346|uniprotkb:A0A0S2Z540 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:d3dpn2_human(display_long)|uniprotkb:SDC3(gene name)|psi-mi:SDC3(display_short)|uniprotkb:hCG_15913(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473879 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) ensembl:ENSG00000162512(gene)|ensembl:ENST00000336798(transcript)|go:"GO:0016021"(integral component of membrane)|interpro:IPR001050(Syndecan)|interpro:IPR003585(Neurexin/syndecan/glycophorin C)|interpro:IPR027789|interpro:IPR030479|interpro:IPR031194|entrezgene/locuslink:9672(identity) intact:EBI-16437069(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:gaGvolZm8Z3tcSA8ynlCh7iTu8g9606 rigid:ZkDxy8rz4lLud216K9KZJHn86SQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR5 uniprotkb:D3DPN2 intact:EBI-10172511|uniprotkb:A0JP64|ensembl:ENSP00000366955 intact:EBI-16473816|ensembl:ENSP00000338346|uniprotkb:A0A0S2Z540 psi-mi:kra42_human(display_long)|uniprotkb:KRTAP4-2(gene name)|psi-mi:KRTAP4-2(display_short)|uniprotkb:KAP4.2(gene name synonym)|uniprotkb:KRTAP4.2(gene name synonym)|uniprotkb:Keratin-associated protein 4.2(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 4.2(gene name synonym) psi-mi:d3dpn2_human(display_long)|uniprotkb:SDC3(gene name)|psi-mi:SDC3(display_short)|uniprotkb:hCG_15913(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473863 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149051.1|ensembl:ENSG00000244537(gene)|ensembl:ENST00000377726(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|entrezgene/locuslink:85291(identity) ensembl:ENSG00000162512(gene)|ensembl:ENST00000336798(transcript)|go:"GO:0016021"(integral component of membrane)|interpro:IPR001050(Syndecan)|interpro:IPR003585(Neurexin/syndecan/glycophorin C)|interpro:IPR027789|interpro:IPR030479|interpro:IPR031194|entrezgene/locuslink:9672(identity) intact:EBI-16436585(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8Ecqy++IpYBBxTj/kQBOfnGxoiM9606 rogid:gaGvolZm8Z3tcSA8ynlCh7iTu8g9606 rigid://5f+bH76hol0GiGyo5Pjun0TLs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR9 uniprotkb:D3DPN2 intact:EBI-14065470|ensembl:ENSP00000377583|ensembl:ENSP00000458927|uniprotkb:Q495J2 intact:EBI-16473816|ensembl:ENSP00000338346|uniprotkb:A0A0S2Z540 psi-mi:kra24_human(display_long)|uniprotkb:KRTAP2-4(gene name)|psi-mi:KRTAP2-4(display_short)|uniprotkb:High sulfur keratin-associated protein 2.4(gene name synonym)|uniprotkb:KAP2.4(gene name synonym)|uniprotkb:KRTAP2.4(gene name synonym)|uniprotkb:Keratin-associated protein 2.4(gene name synonym) psi-mi:d3dpn2_human(display_long)|uniprotkb:SDC3(gene name)|psi-mi:SDC3(display_short)|uniprotkb:hCG_15913(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473847 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000213417(gene)|ensembl:ENSG00000263091(gene)|ensembl:ENST00000394015(transcript)|ensembl:ENST00000572903(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|refseq:NP_001158724.1|refseq:NP_149440.1|entrezgene/locuslink:85294(identity) ensembl:ENSG00000162512(gene)|ensembl:ENST00000336798(transcript)|go:"GO:0016021"(integral component of membrane)|interpro:IPR001050(Syndecan)|interpro:IPR003585(Neurexin/syndecan/glycophorin C)|interpro:IPR027789|interpro:IPR030479|interpro:IPR031194|entrezgene/locuslink:9672(identity) intact:EBI-16436488(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:QSitkYej4+CJRhx3YsYNjKB15FY9606 rogid:gaGvolZm8Z3tcSA8ynlCh7iTu8g9606 rigid:9qfsPxReeUG1q3JdK3qDxRgyO10 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P26371 uniprotkb:D3DPN2 intact:EBI-3958099|ensembl:ENSP00000431443|uniprotkb:Q14564|uniprotkb:Q3MIP8 intact:EBI-16473816|ensembl:ENSP00000338346|uniprotkb:A0A0S2Z540 psi-mi:kra59_human(display_long)|uniprotkb:KRTAP5-9(gene name)|psi-mi:KRTAP5-9(display_short)|uniprotkb:KAP5.9(gene name synonym)|uniprotkb:KRN1(gene name synonym)|uniprotkb:KRTAP5.9(gene name synonym)|uniprotkb:UHSK1(gene name synonym)|uniprotkb:Keratin, cuticle, ultrahigh sulfur 1(gene name synonym)|uniprotkb:Keratin, ultra high-sulfur matrix protein A(gene name synonym)|uniprotkb:Keratin-associated protein 5.9(gene name synonym)|uniprotkb:UHS keratin A(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 5.9(gene name synonym) psi-mi:d3dpn2_human(display_long)|uniprotkb:SDC3(gene name)|psi-mi:SDC3(display_short)|uniprotkb:hCG_15913(orf name) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473831 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000254997(gene)|ensembl:ENST00000528743(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0008544"(epidermis development)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|mint:P26371|reactome:R-HSA-6805567|refseq:NP_005544.4|entrezgene/locuslink:3846(identity) ensembl:ENSG00000162512(gene)|ensembl:ENST00000336798(transcript)|go:"GO:0016021"(integral component of membrane)|interpro:IPR001050(Syndecan)|interpro:IPR003585(Neurexin/syndecan/glycophorin C)|interpro:IPR027789|interpro:IPR030479|interpro:IPR031194|entrezgene/locuslink:9672(identity) intact:EBI-16431287(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:B6s6+/WKO8MfrhEgj4xz7BH/jqE9606 rogid:gaGvolZm8Z3tcSA8ynlCh7iTu8g9606 rigid:aoxfE18ZyWzdELK/CelrH783Itw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8WZ60 intact:EBI-16473794 intact:EBI-6426464|ensembl:ENSP00000341342|uniprotkb:D3DNS8|uniprotkb:Q8N5I1|uniprotkb:B2RB31|uniprotkb:Q8N892 - psi-mi:klhl6_human(display_long)|uniprotkb:KLHL6(gene name)|psi-mi:KLHL6(display_short) psi-mi:"ccsb isoform id: sbds_3"(display_short)|psi-mi:EBI-16473794(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473797 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000172578(gene)|ensembl:ENST00000341319(transcript)|go:"GO:0002467"(germinal center formation)|go:"GO:0050853"(B cell receptor signaling pathway)|interpro:IPR000210(BTB/POZ-like)|interpro:IPR006652(Kelch repeat type 1)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR011705(BTB/Kelch-associated)|interpro:IPR015915(Kelch-type beta propeller)|interpro:IPR017096(Kelch-like protein, gigaxonin)|interpro:IPR029851|refseq:NP_569713.2|entrezgene/locuslink:89857(identity) entrezgene/locuslink:51119(identity) intact:EBI-16440728(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3HSrMq8OrULpGu1i53jA+tFs+xA9606 rogid:KXnpJUs1hkhqKmAUGHAutje9X2A9606 rigid:v0m4QtLF9Vq7zpk993tm+08F0h8 true sufficient binding region:12-621 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6RW13-2 uniprotkb:P04271 intact:EBI-11522760|ensembl:ENSP00000365816 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 psi-mi:q6rw13-2(display_long)|uniprotkb:AGTRAP(gene name)|psi-mi:AGTRAP(display_short)|uniprotkb:AT1 receptor-associated protein(gene name synonym)|uniprotkb:ATRAP(gene name synonym) psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473778 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000177674(gene)|ensembl:ENST00000376629(transcript)|intact:EBI-741181(isoform-parent)|uniprotkb:Q6RW13-2(isoform-parent)|entrezgene/locuslink:57085(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) intact:EBI-16439144(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_1 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:PNzVis/8puQZBJ562gCqZKc078s9606 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rigid:wUErtfCHTW8i4XaTH+TuzLyXNL8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P23297 uniprotkb:A8MRB1 intact:EBI-743686|uniprotkb:Q5T7Y3|uniprotkb:B2R5D9|ensembl:ENSP00000292169 intact:EBI-16432654|ensembl:ENSP00000356038 psi-mi:s10a1_human(display_long)|uniprotkb:S100 calcium-binding protein A1(gene name synonym)|uniprotkb:S-100 protein subunit alpha(gene name synonym)|uniprotkb:S-100 protein alpha chain(gene name synonym)|uniprotkb:S100A1(gene name)|psi-mi:S100A1(display_short)|uniprotkb:S100A(gene name synonym) psi-mi:a8mrb1_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473762 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006262.1|ensembl:ENSG00000160678(gene)|ensembl:ENST00000292169(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0008016"(regulation of heart contraction)|go:"GO:0016529"(sarcoplasmic reticulum)|go:"GO:0021762"(substantia nigra development)|go:"GO:0030018"(Z disc)|go:"GO:0031430"(M band)|go:"GO:0032991"(protein-containing complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043005"(neuron projection)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0051000"(positive regulation of nitric-oxide synthase activity)|go:"GO:0051117"(ATPase binding)|go:"GO:1901387"(positive regulation of voltage-gated calcium channel activity)|go:"GO:1903672"(positive regulation of sprouting angiogenesis)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR028486|mint:P23297|rcsb pdb:2L0P|rcsb pdb:2LHL|rcsb pdb:2LLS|rcsb pdb:2LLT|rcsb pdb:2LLU|rcsb pdb:2LP2|rcsb pdb:2LP3|rcsb pdb:2LUX|rcsb pdb:2M3W|rcsb pdb:5K89|reactome:R-HSA-1236974|reactome:R-HSA-166058|reactome:R-HSA-5602498|reactome:R-HSA-5603041|reactome:R-HSA-5686938|interpro:IPR018247|entrezgene/locuslink:6271(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000367071(transcript)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR026790|entrezgene/locuslink:6285(identity) intact:EBI-16437425(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_2 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:cELa51qDGFnYHPBnpUhMDGYPfOk9606 rogid:YQrqesg+7sfVz8LrMVmDv6yU0lI9606 rigid:2lNJRKvHaeoQVkyr61lU9xqBm1k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q969L2 uniprotkb:P04271 intact:EBI-944295|uniprotkb:Q6ZMD9|uniprotkb:B2R520|ensembl:ENSP00000479708 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 psi-mi:mal2_human(display_long)|uniprotkb:MAL2(gene name)|psi-mi:MAL2(display_short) psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473746 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_443118.1|ensembl:ENSG00000147676(gene)|ensembl:ENST00000614891(transcript)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016324"(apical plasma membrane)|go:"GO:0019911"(structural constituent of myelin sheath)|go:"GO:0042552"(myelination)|go:"GO:0045056"(transcytosis)|go:"GO:0045121"(membrane raft)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0070062"(extracellular exosome)|interpro:IPR008253(Marvel)|interpro:IPR013295("Myelin and lymphocyte (MAL)")|interpro:IPR033240|entrezgene/locuslink:114569(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) intact:EBI-16437275(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_1 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7SApzrGTzj8V3GIwkdO0X/z6geg9606 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rigid:gqly5ZxlKoVphTaFsHZQerGoj/A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UI14 uniprotkb:P04271 intact:EBI-712367|ensembl:ENSP00000222008|uniprotkb:Q7Z4Y2|uniprotkb:Q9Y3R1 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 psi-mi:praf1_human(display_long)|uniprotkb:PRA1 family protein 1(gene name synonym)|uniprotkb:RABAC1(gene name)|psi-mi:RABAC1(display_short)|uniprotkb:PRA1(gene name synonym)|uniprotkb:PRAF1(gene name synonym) psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473730 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006414.2|ensembl:ENSG00000105404(gene)|ensembl:ENST00000222008(transcript)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005886"(plasma membrane)|go:"GO:0008021"(synaptic vesicle)|go:"GO:0008022"(protein C-terminus binding)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0070064"(proline-rich region binding)|interpro:IPR004895(Prenylated rab acceptor PRA1)|mint:Q9UI14|entrezgene/locuslink:10567(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) intact:EBI-16434838(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_1 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WS2rUY7yXRbR7pqWgfUCbnEiDbg9606 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rigid:bEKr9JIJIFO+ykQKqUdThHicWK8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P04271 uniprotkb:A8MRB1 intact:EBI-458391|ensembl:ENSP00000291700|ensembl:ENSP00000380769|uniprotkb:D3DSN6 intact:EBI-16432654|ensembl:ENSP00000356038 psi-mi:s100b_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short)|uniprotkb:S100 calcium-binding protein B(gene name synonym)|uniprotkb:S-100 protein subunit beta(gene name synonym)|uniprotkb:S-100 protein beta chain(gene name synonym) psi-mi:a8mrb1_human(display_long)|uniprotkb:S100B(gene name)|psi-mi:S100B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16473698 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000160307(gene)|ensembl:ENST00000291700(transcript)|ensembl:ENST00000397648(transcript)|go:"GO:0001726"(ruffle)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005615"(extracellular space)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007409"(axonogenesis)|go:"GO:0007417"(central nervous system development)|go:"GO:0007611"(learning or memory)|go:"GO:0007613"(memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0031643"(positive regulation of myelination)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043025"(neuronal cell body)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0044548"(S100 protein binding)|go:"GO:0048156"(tau protein binding)|go:"GO:0048168"(regulation of neuronal synaptic plasticity)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0048708"(astrocyte differentiation)|go:"GO:0050786"(RAGE receptor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0051597"(response to methylmercury)|go:"GO:0060291"(long-term synaptic potentiation)|go:"GO:0071456"(cellular response to hypoxia)|go:"GO:2001015"(negative regulation of skeletal muscle cell differentiation)|interpro:IPR001751(S100/CaBP-9k-type, calcium binding)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR018247|interpro:IPR028481|mint:P04271|rcsb pdb:1MQ1|rcsb pdb:1UWO|rcsb pdb:2H61|rcsb pdb:2M49|rcsb pdb:2PRU|rcsb pdb:3CZT|rcsb pdb:3D0Y|rcsb pdb:3D10|rcsb pdb:3HCM|rcsb pdb:4XYN|rcsb pdb:5CSF|rcsb pdb:5CSI|rcsb pdb:5CSJ|rcsb pdb:5CSN|rcsb pdb:5D7F|go:"GO:0051384"(response to glucocorticoid)|reactome:R-HSA-1251985|reactome:R-HSA-445989|reactome:R-HSA-879415|reactome:R-HSA-933542|refseq:NP_006263.1|refseq:XP_016883913.1|entrezgene/locuslink:6285(identity) ensembl:ENSG00000160307(gene)|ensembl:ENST00000367071(transcript)|interpro:IPR011992(EF-Hand type)|interpro:IPR013787(S100/CaBP-9k-type, calcium binding, subdomain)|interpro:IPR026790|entrezgene/locuslink:6285(identity) intact:EBI-16433849(see-also) - - comment:"Evidence for isoform CCSB isoform ID: S100B_2 expression is provided in figureS2D."|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:e6p9zHV5sa8+lIZgYW1aiAAfq3s9606 rogid:YQrqesg+7sfVz8LrMVmDv6yU0lI9606 rigid:kvj3OmJXQiVuC0X4nkYTb0DenjQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P0C7W6 uniprotkb:A0A0S2Z4F2 intact:EBI-2548868|ensembl:ENSP00000329860 intact:EBI-16429215 psi-mi:cc172_human(display_long)|uniprotkb:CCDC172(gene name)|psi-mi:CCDC172(display_short)|uniprotkb:C10orf96(gene name synonym) psi-mi:a0a0s2z4f2_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474572 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_940917.1|ensembl:ENSG00000182645(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0097225"(sperm midpiece)|interpro:IPR029618|mint:P0C7W6|ensembl:ENST00000333254(transcript)|refseq:XP_016871695.1|entrezgene/locuslink:374355(identity) go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR038096|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16440716(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JAaMYXob1bjFtiCvHmuzgCvq+FU9606 rogid:g9OLRu1IBFwrYMH4lg6jqGaQoPA9606 rigid:A7n5cU4PnLzy30cEMoC9cuvtOvc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HA47-2 uniprotkb:Q9HA47-2 intact:EBI-16434682|ensembl:ENSP00000361282 intact:EBI-16434682|ensembl:ENSP00000361282 psi-mi:q9ha47-2(display_long)|uniprotkb:Cytidine monophosphokinase 1(gene name synonym)|uniprotkb:Uridine monophosphokinase 1(gene name synonym)|uniprotkb:UCK1(gene name)|psi-mi:UCK1(display_short)|uniprotkb:URK1(gene name synonym) psi-mi:q9ha47-2(display_long)|uniprotkb:Cytidine monophosphokinase 1(gene name synonym)|uniprotkb:Uridine monophosphokinase 1(gene name synonym)|uniprotkb:UCK1(gene name)|psi-mi:UCK1(display_short)|uniprotkb:URK1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474809 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000130717(gene)|ensembl:ENST00000372208(transcript)|intact:EBI-717582(isoform-parent)|uniprotkb:Q9HA47-2(isoform-parent)|entrezgene/locuslink:83549(identity) ensembl:ENSG00000130717(gene)|ensembl:ENST00000372208(transcript)|intact:EBI-717582(isoform-parent)|uniprotkb:Q9HA47-2(isoform-parent)|entrezgene/locuslink:83549(identity) intact:EBI-16434688(see-also) isoform-comment:"Ref.8 (AAH15547) sequence is in conflict in position: 180:A->T." isoform-comment:"Ref.8 (AAH15547) sequence is in conflict in position: 180:A->T." caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZBmfkyHv6PVOkOa7ZJtebWdEOtQ9606 rogid:ZBmfkyHv6PVOkOa7ZJtebWdEOtQ9606 rigid:tiBFlDEcc4567EuaagBAdO4XKf4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 intact:EBI-16474742 - - psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:"ccsb isoform id: tstd2_2"(display_short)|psi-mi:EBI-16474742(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474793 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) entrezgene/locuslink:158427(identity) intact:EBI-16430672(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:AYA+VA0eqnWNNe0jPVVL7D/EY2E9606 rigid:+T8K3qdBKP8Eg18p9TvxlXtWn+s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 intact:EBI-16474742 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 - psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:"ccsb isoform id: tstd2_2"(display_short)|psi-mi:EBI-16474742(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474777 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) entrezgene/locuslink:158427(identity) intact:EBI-16429720(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:AYA+VA0eqnWNNe0jPVVL7D/EY2E9606 rigid:6DpVutyXiUillZFxkuEI22mCI/c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 intact:EBI-16474742 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 - psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:"ccsb isoform id: tstd2_2"(display_short)|psi-mi:EBI-16474742(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474761 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) entrezgene/locuslink:158427(identity) intact:EBI-16429067(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:AYA+VA0eqnWNNe0jPVVL7D/EY2E9606 rigid:5wdlBkDr2x3nWF6FFonvXYzFYv4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UKT9 intact:EBI-16474742 intact:EBI-747204|uniprotkb:Q8WWQ9|uniprotkb:Q8WWR0|uniprotkb:Q8WWR1|uniprotkb:Q8WWR2|uniprotkb:Q8WWR3|uniprotkb:Q8N574|uniprotkb:B4DVV5|uniprotkb:Q69BL6|uniprotkb:Q69BL7|uniprotkb:Q69BL8|uniprotkb:Q69BL9|uniprotkb:Q69BM0|uniprotkb:Q69BM1|uniprotkb:Q69BM2|uniprotkb:Q69BM3|uniprotkb:Q69BM5|ensembl:ENSP00000344544 - psi-mi:ikzf3_human(display_long)|uniprotkb:ZNFN1A3(gene name synonym)|uniprotkb:Ikaros family zinc finger protein 3(gene name synonym)|uniprotkb:IKZF3(gene name)|psi-mi:IKZF3(display_short) psi-mi:"ccsb isoform id: tstd2_2"(display_short)|psi-mi:EBI-16474742(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474745 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001271443.1|refseq:NP_001271444.1|refseq:NP_036613.2|refseq:NP_899051.1|refseq:NP_899052.1|refseq:NP_899053.1|refseq:NP_899054.1|refseq:NP_899055.1|refseq:NP_001271445.1|refseq:NP_001244337.1|refseq:NP_001244338.1|refseq:NP_001244339.1|refseq:NP_001244340.1|refseq:NP_001244341.1|refseq:NP_001244342.1|refseq:NP_001244343.1|ensembl:ENSG00000161405(gene)|ensembl:ENST00000346872(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007498"(mesoderm development)|go:"GO:0009617"(response to bacterium)|go:"GO:0030888"(regulation of B cell proliferation)|go:"GO:0042113"(B cell activation)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042826"(histone deacetylase binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0045577"(regulation of B cell differentiation)|go:"GO:0045619"(regulation of lymphocyte differentiation)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036236|go:"GO:0046872"(metal ion binding)|dip:DIP-56975N|entrezgene/locuslink:22806(identity) entrezgene/locuslink:158427(identity) intact:EBI-16428962(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:2Kp6LefSLfK5VIiE6DmQusFIfMY9606 rogid:AYA+VA0eqnWNNe0jPVVL7D/EY2E9606 rigid:b8HvF5MMUT1Iup9uvxri9+PASH0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:A0A0S2Z611 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-16474723 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:a0a0s2z611_human(display_long)|uniprotkb:TMEM67(gene name)|psi-mi:TMEM67(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474726 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0016021"(integral component of membrane)|go:"GO:0036038"(MKS complex)|go:"GO:0060271"(cilium assembly)|interpro:IPR009030(Growth factor, receptor)|interpro:IPR019170|entrezgene/locuslink:91147(identity) intact:EBI-16431191(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:T+MPKb/Ekjn5/2LbWj6xoHUd8+I9606 rigid:WnNq68CO5tOnH7UP9KhrsNq/uzM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UMX0-2 uniprotkb:Q5HYA8 intact:EBI-10173939|ensembl:ENSP00000257468 intact:EBI-11334880|uniprotkb:B3KRU5|uniprotkb:Q8IZ06|uniprotkb:Q7Z5T8|uniprotkb:G5E9H2|uniprotkb:Q3ZCX3|uniprotkb:B3KT47|ensembl:ENSP00000314488|ensembl:ENSP00000389998 psi-mi:q9umx0-2(display_long)|uniprotkb:DA41(gene name synonym)|uniprotkb:PLIC1(gene name synonym)|uniprotkb:Protein linking IAP with cytoskeleton 1(gene name synonym)|uniprotkb:UBQLN1(gene name)|psi-mi:UBQLN1(display_short) psi-mi:mks3_human(display_long)|uniprotkb:TMEM67(gene name)|psi-mi:TMEM67(display_short)|uniprotkb:MKS3(gene name synonym)|uniprotkb:Meckel syndrome type 3 protein(gene name synonym)|uniprotkb:Transmembrane protein 67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474704 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135018(gene)|ensembl:ENST00000257468(transcript)|intact:EBI-741480(isoform-parent)|uniprotkb:Q9UMX0-2(isoform-parent)|entrezgene/locuslink:29979(identity) go:"GO:0005813"(centrosome)|go:"GO:0010826"(negative regulation of centrosome duplication)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030659"(cytoplasmic vesicle membrane)|go:"GO:0031005"(filamin binding)|go:"GO:0035869"(ciliary transition zone)|go:"GO:0036038"(MKS complex)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0060170"(ciliary membrane)|go:"GO:0060271"(cilium assembly)|interpro:IPR009030(Growth factor, receptor)|interpro:IPR019170|reactome:R-HSA-5620912|ensembl:ENSG00000164953(gene)|ensembl:ENST00000323130(transcript)|ensembl:ENST00000453321(transcript)|go:"GO:0005789"(endoplasmic reticulum membrane)|entrezgene/locuslink:91147(identity) intact:EBI-16431191(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:CTO0JDVzIxV1y8UKs5MKuCbrAdY9606 rogid:4YrnhWM1UaytyidG1L/ikUBHZlY9606 rigid:Ev8k2ZpADf6AEO2kT6jy2JGU+/E true - sufficient binding region:11-995 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96HH9 intact:EBI-16474685 intact:EBI-2832937|uniprotkb:Q9H753|uniprotkb:D3DSZ3|uniprotkb:B7Z1F2|uniprotkb:B7Z3R1|uniprotkb:B7Z6D8|uniprotkb:B7Z8T2|ensembl:ENSP00000285689 - psi-mi:grm2b_human(display_long)|uniprotkb:GRAMD2B(gene name)|psi-mi:GRAMD2B(display_short)|uniprotkb:GRAMD3(gene name synonym)|uniprotkb:HCV NS3-transactivated protein 2(gene name synonym)|uniprotkb:NS3TP2(gene name synonym) psi-mi:"ccsb isoform id: tmem43_2"(display_short)|psi-mi:EBI-16474685(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474688 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_016865274.1|refseq:NP_001139791.1|refseq:NP_001139792.1|refseq:NP_001139793.1|refseq:NP_001139794.1|refseq:NP_076416.2|refseq:XP_005272120.1|ensembl:ENSG00000155324(gene)|ensembl:ENST00000285689(transcript)|go:"GO:0005881"(cytoplasmic microtubule)|go:"GO:0042802"(identical protein binding)|interpro:IPR004182(GRAM)|interpro:IPR011993(Pleckstrin homology-type)|entrezgene/locuslink:65983(identity) entrezgene/locuslink:79188(identity) intact:EBI-16433789(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:6UkVJddV5/mHpLX/rk00jMwCA+k9606 rogid:uxAcxqfUYh0DNraC4u9Jyz52/wg9606 rigid:lS0vtbmEF6jvcmGkCl8c76LN3Ec true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z6S1 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16474646 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z6s1_human(display_long)|uniprotkb:TEX9(gene name)|psi-mi:TEX9(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474665 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) entrezgene/locuslink:374618(identity) intact:EBI-16438614(see-also)|intact:EBI-16438626(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:6fh/qjSn0/Yy9eZsqEm3hGVB8gY9606 rigid:q+FO9YM9b7P/jvVHKERhC+bXkVs true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NUQ1 uniprotkb:A0A0S2Z6S1 intact:EBI-726876|uniprotkb:Q75MG9|uniprotkb:Q75MH0|uniprotkb:Q96IW8|uniprotkb:Q9H229|uniprotkb:Q9HAD9|intact:EBI-28981798|ensembl:ENSP00000257700 intact:EBI-16474646 psi-mi:rint1_human(display_long)|uniprotkb:RAD50 interactor 1(gene name synonym)|uniprotkb:RINT1(gene name)|psi-mi:RINT1(display_short) psi-mi:a0a0s2z6s1_human(display_long)|uniprotkb:TEX9(gene name)|psi-mi:TEX9(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474649 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135249(gene)|ensembl:ENST00000257700(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007095"(mitotic G2 DNA damage checkpoint signaling)|go:"GO:0015031"(protein transport)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:0070939"(Dsl1/NZR complex)|interpro:IPR007528(RINT-1/TIP-1)|interpro:IPR042044|reactome:R-HSA-6811434|refseq:NP_068749.3|ensembl:ENSP00000257700|dip:DIP-36477N|entrezgene/locuslink:60561(identity) entrezgene/locuslink:374618(identity) intact:EBI-16431659(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUzUSBI8f6ednxeVnP97ifOMoPc9606 rogid:6fh/qjSn0/Yy9eZsqEm3hGVB8gY9606 rigid:0hXrLxWRcA4cTPV332DiYyhDGFw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5JR59-3 uniprotkb:A0A0S2Z4E5 intact:EBI-11522433|ensembl:ENSP00000370186 intact:EBI-16432288 psi-mi:q5jr59-3(display_long)|uniprotkb:MTUS2(gene name)|psi-mi:MTUS2(display_short)|uniprotkb:CAZIP(gene name synonym)|uniprotkb:Cardiac zipper protein(gene name synonym)|uniprotkb:KIAA0774(gene name synonym)|uniprotkb:Microtubule plus-end tracking protein TIP150(gene name synonym)|uniprotkb:TIP150(gene name synonym) psi-mi:a0a0s2z4e5_human(display_long)|uniprotkb:TEAD4(gene name)|psi-mi:TEAD4(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474629 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000132938(gene)|ensembl:ENST00000380808(transcript)|intact:EBI-742948(isoform-parent)|uniprotkb:Q5JR59-3(isoform-parent)|entrezgene/locuslink:23281(identity) interpro:IPR041086|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|interpro:IPR000818(TEA/ATTS)|entrezgene/locuslink:7004(identity) intact:EBI-16440888(see-also)|intact:EBI-16440900(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:npId9tC7VoLN/jteoBiRbSYChPs9606 rogid:C79mELdRSQO+6g3EsushmznVLBg9606 rigid:Z45z5aT8PwryAC9bG0bFDtR/WJY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q04864-2 uniprotkb:P54577 intact:EBI-10829018|ensembl:ENSP00000377989 intact:EBI-1048893|uniprotkb:O43276|uniprotkb:Q53EN1|uniprotkb:B3KWK4|uniprotkb:D3DPQ4|ensembl:ENSP00000362576 psi-mi:q04864-2(display_long)|uniprotkb:REL(gene name)|psi-mi:REL(display_short) psi-mi:syyc_human(display_long)|uniprotkb:YARS1(gene name)|psi-mi:YARS1(display_short)|uniprotkb:Tyrosyl-tRNA synthetase(gene name synonym)|uniprotkb:YARS(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475111 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000162924(gene)|ensembl:ENST00000394479(transcript)|intact:EBI-307352(isoform-parent)|uniprotkb:Q04864-2(isoform-parent)|entrezgene/locuslink:5966(identity) refseq:NP_003671.1|ensembl:ENSG00000134684(gene)|ensembl:ENST00000373477(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0004831"(tyrosine-tRNA ligase activity)|go:"GO:0005153"(interleukin-8 receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005615"(extracellular space)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006437"(tyrosyl-tRNA aminoacylation)|go:"GO:0006915"(apoptotic process)|go:"GO:0016604"(nuclear body)|interpro:IPR002305(Aminoacyl-tRNA synthetase, class Ib)|interpro:IPR002307(Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)|interpro:IPR002547(tRNA-binding region)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|rcsb pdb:1N3L|rcsb pdb:1NTG|rcsb pdb:1Q11|rcsb pdb:4Q93|rcsb pdb:4QBT|rcsb pdb:5THH|rcsb pdb:5THL|reactome:R-HSA-379716|dip:DIP-50415N|entrezgene/locuslink:8565(identity) intact:EBI-16435802(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8siR4qQAj7RdqB2Lmy8maiEO/349606 rogid:y/0Qs8iOgW5w5LVLWnCvowVpEu89606 rigid:pXubpguM35D63KpLdhNImXjQDbM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15025 uniprotkb:A0A0S2Z555 intact:EBI-357849|uniprotkb:A4F1W8|uniprotkb:O76008|uniprotkb:Q96EL9|uniprotkb:Q99833|uniprotkb:Q9H1J3|uniprotkb:B7Z699|uniprotkb:Q6N077|ensembl:ENSP00000317891|ensembl:ENSP00000428187|ensembl:ENSP00000430760|uniprotkb:A4F1W9|uniprotkb:A4F1X2|uniprotkb:A4F1X4|uniprotkb:A4F1X5|uniprotkb:A4F1X6|uniprotkb:A4F1X7|uniprotkb:A4F1X9|uniprotkb:E7EPY1|uniprotkb:E7ET96|uniprotkb:Q05KP3|uniprotkb:Q05KP4 intact:EBI-16475060 psi-mi:tnip1_human(display_long)|uniprotkb:TNIP1(gene name)|psi-mi:TNIP1(display_short)|uniprotkb:KIAA0113(gene name synonym)|uniprotkb:NAF1(gene name synonym)|uniprotkb:Nef-associated factor 1(gene name synonym)|uniprotkb:HIV-1 Nef-interacting protein(gene name synonym)|uniprotkb:Virion-associated nuclear shuttling protein(gene name synonym)|uniprotkb:Nip40-1(gene name synonym)|uniprotkb:A20-binding inhibitor of NF-kappa-B activation 1(gene name synonym) psi-mi:a0a0s2z555_human(display_long)|uniprotkb:VPS33B(gene name)|psi-mi:VPS33B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475095 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006049.3|refseq:NP_001239319.1|refseq:NP_001239320.1|refseq:NP_001239321.1|refseq:NP_001239322.1|refseq:NP_001245383.1|dip:DIP-27577N|refseq:NP_001239315.1|ensembl:ENSG00000145901(gene)|ensembl:ENST00000315050(transcript)|ensembl:ENST00000521591(transcript)|ensembl:ENST00000522226(transcript)|go:"GO:0002755"(MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0006952"(defense response)|go:"GO:0006954"(inflammatory response)|go:"GO:0007159"(leukocyte cell-cell adhesion)|go:"GO:0009101"(glycoprotein biosynthetic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043124"(negative regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050729"(positive regulation of inflammatory response)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0085032"(modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade)|go:"GO:1903003"(positive regulation of protein deubiquitination)|interpro:IPR033372|mint:Q15025|reactome:R-HSA-5689896|go:"GO:0051019"(mitogen-activated protein kinase binding)|refseq:NP_001239314.1|refseq:NP_001245384.1|refseq:NP_001245385.1|refseq:XP_006714814.1|refseq:XP_006714815.1|entrezgene/locuslink:10318(identity) interpro:IPR036045|interpro:IPR043154|entrezgene/locuslink:26276(identity) intact:EBI-16438372(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:16Vjb5CuGTAbW2M22qbCxgXtV1o9606 rogid:ihNrx9Ir+4ZSDi9Uolbp1fXCV8E9606 rigid:mUBSeXoE3g/zv8CpWHTZXpIo7q4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15025 uniprotkb:A0A0S2Z589 intact:EBI-357849|uniprotkb:A4F1W8|uniprotkb:O76008|uniprotkb:Q96EL9|uniprotkb:Q99833|uniprotkb:Q9H1J3|uniprotkb:B7Z699|uniprotkb:Q6N077|ensembl:ENSP00000317891|ensembl:ENSP00000428187|ensembl:ENSP00000430760|uniprotkb:A4F1W9|uniprotkb:A4F1X2|uniprotkb:A4F1X4|uniprotkb:A4F1X5|uniprotkb:A4F1X6|uniprotkb:A4F1X7|uniprotkb:A4F1X9|uniprotkb:E7EPY1|uniprotkb:E7ET96|uniprotkb:Q05KP3|uniprotkb:Q05KP4 intact:EBI-16475041 psi-mi:tnip1_human(display_long)|uniprotkb:TNIP1(gene name)|psi-mi:TNIP1(display_short)|uniprotkb:KIAA0113(gene name synonym)|uniprotkb:NAF1(gene name synonym)|uniprotkb:Nef-associated factor 1(gene name synonym)|uniprotkb:HIV-1 Nef-interacting protein(gene name synonym)|uniprotkb:Virion-associated nuclear shuttling protein(gene name synonym)|uniprotkb:Nip40-1(gene name synonym)|uniprotkb:A20-binding inhibitor of NF-kappa-B activation 1(gene name synonym) psi-mi:a0a0s2z589_human(display_long)|uniprotkb:VPS33B(gene name)|psi-mi:VPS33B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475079 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006049.3|refseq:NP_001239319.1|refseq:NP_001239320.1|refseq:NP_001239321.1|refseq:NP_001239322.1|refseq:NP_001245383.1|dip:DIP-27577N|refseq:NP_001239315.1|ensembl:ENSG00000145901(gene)|ensembl:ENST00000315050(transcript)|ensembl:ENST00000521591(transcript)|ensembl:ENST00000522226(transcript)|go:"GO:0002755"(MyD88-dependent toll-like receptor signaling pathway)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0006952"(defense response)|go:"GO:0006954"(inflammatory response)|go:"GO:0007159"(leukocyte cell-cell adhesion)|go:"GO:0009101"(glycoprotein biosynthetic process)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043124"(negative regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050729"(positive regulation of inflammatory response)|go:"GO:0070373"(negative regulation of ERK1 and ERK2 cascade)|go:"GO:0085032"(modulation by symbiont of host I-kappaB kinase/NF-kappaB cascade)|go:"GO:1903003"(positive regulation of protein deubiquitination)|interpro:IPR033372|mint:Q15025|reactome:R-HSA-5689896|go:"GO:0051019"(mitogen-activated protein kinase binding)|refseq:NP_001239314.1|refseq:NP_001245384.1|refseq:NP_001245385.1|refseq:XP_006714814.1|refseq:XP_006714815.1|entrezgene/locuslink:10318(identity) entrezgene/locuslink:26276(identity) intact:EBI-16438372(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:16Vjb5CuGTAbW2M22qbCxgXtV1o9606 rogid:YB3/q1I8N7Ggx8pqaUE76hdAbPg9606 rigid:MThsbLDIv7OQwe22IZnHqe5Zgi4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H9C1 uniprotkb:A0A0S2Z555 intact:EBI-749080|uniprotkb:O95434|uniprotkb:Q9H7E1|uniprotkb:Q9H9I9|uniprotkb:B4DPI6|ensembl:ENSP00000339122|ensembl:ENSP00000452181|ensembl:ENSP00000452191 intact:EBI-16475060 psi-mi:spe39_human(display_long)|uniprotkb:VIPAS39(gene name)|psi-mi:VIPAS39(display_short)|uniprotkb:C14orf133(gene name synonym)|uniprotkb:SPE39(gene name synonym)|uniprotkb:VIPAR(gene name synonym)|uniprotkb:VPS33B-interacting protein in apical-basolateral polarity regulator(gene name synonym)|uniprotkb:VPS33B-interacting protein in polarity and apical restriction(gene name synonym) psi-mi:a0a0s2z555_human(display_long)|uniprotkb:VPS33B(gene name)|psi-mi:VPS33B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475063 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001180243.1|refseq:NP_001180244.1|refseq:NP_001180246.1|refseq:NP_071350.2|refseq:NP_001180245.1|ensembl:ENSG00000151445(gene)|ensembl:ENST00000343765(transcript)|ensembl:ENST00000553888(transcript)|ensembl:ENST00000557658(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007034"(vacuolar transport)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0017185"(peptidyl-lysine hydroxylation)|go:"GO:0030154"(cell differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0032963"(collagen metabolic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0055037"(recycling endosome)|interpro:IPR006925(Vps16, C-terminal)|interpro:IPR038132|interpro:IPR040057|mint:Q9H9C1|entrezgene/locuslink:63894(identity) interpro:IPR036045|interpro:IPR043154|entrezgene/locuslink:26276(identity) intact:EBI-16433017(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Th3K4elgRIPP7DHwIRBN+GKNOXM9606 rogid:ihNrx9Ir+4ZSDi9Uolbp1fXCV8E9606 rigid:KCIooJumEuwOCsZDypZEOZ+Of6E true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H9C1 uniprotkb:A0A0S2Z589 intact:EBI-749080|uniprotkb:O95434|uniprotkb:Q9H7E1|uniprotkb:Q9H9I9|uniprotkb:B4DPI6|ensembl:ENSP00000339122|ensembl:ENSP00000452181|ensembl:ENSP00000452191 intact:EBI-16475041 psi-mi:spe39_human(display_long)|uniprotkb:VIPAS39(gene name)|psi-mi:VIPAS39(display_short)|uniprotkb:C14orf133(gene name synonym)|uniprotkb:SPE39(gene name synonym)|uniprotkb:VIPAR(gene name synonym)|uniprotkb:VPS33B-interacting protein in apical-basolateral polarity regulator(gene name synonym)|uniprotkb:VPS33B-interacting protein in polarity and apical restriction(gene name synonym) psi-mi:a0a0s2z589_human(display_long)|uniprotkb:VPS33B(gene name)|psi-mi:VPS33B(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475044 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001180243.1|refseq:NP_001180244.1|refseq:NP_001180246.1|refseq:NP_071350.2|refseq:NP_001180245.1|ensembl:ENSG00000151445(gene)|ensembl:ENST00000343765(transcript)|ensembl:ENST00000553888(transcript)|ensembl:ENST00000557658(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005769"(early endosome)|go:"GO:0005770"(late endosome)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0007034"(vacuolar transport)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008333"(endosome to lysosome transport)|go:"GO:0017185"(peptidyl-lysine hydroxylation)|go:"GO:0030154"(cell differentiation)|go:"GO:0030199"(collagen fibril organization)|go:"GO:0032963"(collagen metabolic process)|go:"GO:0043687"(post-translational protein modification)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0055037"(recycling endosome)|interpro:IPR006925(Vps16, C-terminal)|interpro:IPR038132|interpro:IPR040057|mint:Q9H9C1|entrezgene/locuslink:63894(identity) entrezgene/locuslink:26276(identity) intact:EBI-16433017(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Th3K4elgRIPP7DHwIRBN+GKNOXM9606 rogid:YB3/q1I8N7Ggx8pqaUE76hdAbPg9606 rigid:GAYzdWonLhs0Zj6OwhbTSDFQhH4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:A0A0S2Z5H5 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-16475012 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:a0a0s2z5h5_human(display_long)|uniprotkb:VPS28(gene name)|psi-mi:VPS28(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475022 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) go:"GO:0000813"(ESCRT I complex)|go:"GO:0015031"(protein transport)|go:"GO:0031902"(late endosome membrane)|go:"GO:0032509"(endosome transport via multivesicular body sorting pathway)|interpro:IPR038358|refseq:XP_005272381.1|interpro:IPR007143(Vacuolar protein sorting-associated, VPS28)|interpro:IPR017899|interpro:IPR017898|interpro:IPR037202|interpro:IPR037206|entrezgene/locuslink:51160(identity) intact:EBI-16438638(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:I1oHVgmyOif0+MUSGRncDDdOMDI9606 rigid:qmVhq0+Kp2TVlvSCADIOYt1ixzA true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:A0A0S2Z698 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-16474860 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:a0a0s2z698_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474991 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16440788(see-also)|intact:EBI-16440802(see-also)|intact:EBI-16440816(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:fT+je8uPSr2lrYO4Tv4+T0O0SJ49606 rigid:vN1ipA4gQFDraWrnX06T1nviL8Q true sufficient binding region:32-313 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z639 intact:EBI-16439278 intact:EBI-16440814 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z639_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474975 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) interpro:IPR035994|go:"GO:0003824"(catalytic activity)|go:"GO:0009116"(nucleoside metabolic process)|entrezgene/locuslink:151531(identity) intact:EBI-16439735(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:u91e0/um6Z08kXAtXkSv8NXLOcg9606 rigid:DHHYoNcOb37ulcBGTeAl8G53sfE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z698 intact:EBI-16439278 intact:EBI-16474860 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z698_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474959 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16439735(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:fT+je8uPSr2lrYO4Tv4+T0O0SJ49606 rigid:5smZGw0i6+TQaD6i/7SDUpGfajI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 uniprotkb:A0A0S2Z6U5 intact:EBI-16439278 intact:EBI-16432858 psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:a0a0s2z6u5_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474943 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|go:"GO:0044206"(UMP salvage)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR018016|refseq:XP_005246416.1|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16439735(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:VyzKKO5ec+Y8bdAeaJtLyApjOak9606 rigid:gqQDw5h56p3GTIZV2Ba9yJ5QYBQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95045-2 uniprotkb:A0A0S2Z639 intact:EBI-11528386|ensembl:ENSP00000474090 intact:EBI-16440814 psi-mi:o95045-2(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:a0a0s2z639_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474923 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10191025(isoform-parent)|ensembl:ENSG00000007001(gene)|ensembl:ENST00000605860(transcript)|uniprotkb:O95045-2(isoform-parent)|entrezgene/locuslink:151531(identity) interpro:IPR035994|go:"GO:0003824"(catalytic activity)|go:"GO:0009116"(nucleoside metabolic process)|entrezgene/locuslink:151531(identity) intact:EBI-16432844(see-also)|intact:EBI-16432860(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:owY6a3SJ4JVsFePCTPW+NLGK6QQ9606 rogid:u91e0/um6Z08kXAtXkSv8NXLOcg9606 rigid:pp8sXtmY1T4sW/eDS2wew/+BpBQ true sufficient binding region:58-374 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95045-2 uniprotkb:A0A0S2Z698 intact:EBI-11528386|ensembl:ENSP00000474090 intact:EBI-16474860 psi-mi:o95045-2(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:a0a0s2z698_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474903 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-10191025(isoform-parent)|ensembl:ENSG00000007001(gene)|ensembl:ENST00000605860(transcript)|uniprotkb:O95045-2(isoform-parent)|entrezgene/locuslink:151531(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16432844(see-also)|intact:EBI-16432860(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:owY6a3SJ4JVsFePCTPW+NLGK6QQ9606 rogid:fT+je8uPSr2lrYO4Tv4+T0O0SJ49606 rigid:Lh/fLgss+AWGNNNNfvnAj2LugJg true sufficient binding region:58-374 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:A0A0S2Z639 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-16440814 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:a0a0s2z639_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474887 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) interpro:IPR035994|go:"GO:0003824"(catalytic activity)|go:"GO:0009116"(nucleoside metabolic process)|entrezgene/locuslink:151531(identity) intact:EBI-16430061(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:u91e0/um6Z08kXAtXkSv8NXLOcg9606 rigid:TIivXsRUj8ALRNOIb/WB0GYTb84 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:A0A0S2Z698 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-16474860 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:a0a0s2z698_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474871 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16430061(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:fT+je8uPSr2lrYO4Tv4+T0O0SJ49606 rigid:vN1ipA4gQFDraWrnX06T1nviL8Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IUQ4-2 uniprotkb:A0A0S2Z6U5 intact:EBI-11522811|ensembl:ENSP00000349156 intact:EBI-16432858 psi-mi:q8iuq4-2(display_long)|uniprotkb:SIAH1(gene name)|psi-mi:SIAH1(display_short)|uniprotkb:HUMSIAH(gene name synonym)|uniprotkb:Seven in absentia homolog 1(gene name synonym)|uniprotkb:Siah-1a(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase SIAH1(gene name synonym) psi-mi:a0a0s2z6u5_human(display_long)|uniprotkb:UPP2(gene name)|psi-mi:UPP2(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474844 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-747107(isoform-parent)|ensembl:ENSG00000196470(gene)|ensembl:ENST00000356721(transcript)|uniprotkb:Q8IUQ4-2(isoform-parent)|entrezgene/locuslink:6477(identity) go:"GO:0004850"(uridine phosphorylase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0009116"(nucleoside metabolic process)|go:"GO:0009166"(nucleotide catabolic process)|go:"GO:0044206"(UMP salvage)|interpro:IPR000845(Nucleoside phosphorylase)|interpro:IPR010059(Uridine phosphorylase, eukaryotic)|interpro:IPR018016|refseq:XP_005246416.1|interpro:IPR035994|entrezgene/locuslink:151531(identity) intact:EBI-16430061(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:M4q06jVbWuq1mGMXvtuFBaMEgZM9606 rogid:VyzKKO5ec+Y8bdAeaJtLyApjOak9606 rigid:oC4nKqUXADb9RQFLJQzVRVVcvrA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9HA47-2 uniprotkb:Q9HA47 intact:EBI-16434682|ensembl:ENSP00000361282 intact:EBI-717582|uniprotkb:Q5JT12|uniprotkb:Q6IA74|uniprotkb:Q5JT09|uniprotkb:Q5JT13|uniprotkb:Q96BJ0|uniprotkb:Q5JT10|ensembl:ENSP00000361289 psi-mi:q9ha47-2(display_long)|uniprotkb:Cytidine monophosphokinase 1(gene name synonym)|uniprotkb:Uridine monophosphokinase 1(gene name synonym)|uniprotkb:UCK1(gene name)|psi-mi:UCK1(display_short)|uniprotkb:URK1(gene name synonym) psi-mi:uck1_human(display_long)|uniprotkb:Uridine monophosphokinase 1(gene name synonym)|uniprotkb:Cytidine monophosphokinase 1(gene name synonym)|uniprotkb:UCK1(gene name)|psi-mi:UCK1(display_short)|uniprotkb:URK1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16474825 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000130717(gene)|ensembl:ENST00000372208(transcript)|intact:EBI-717582(isoform-parent)|uniprotkb:Q9HA47-2(isoform-parent)|entrezgene/locuslink:83549(identity) refseq:NP_001129426.1|refseq:NP_113620.1|refseq:NP_001305448.1|refseq:NP_001248379.1|refseq:NP_001248380.1|ensembl:ENSG00000130717(gene)|ensembl:ENST00000372215(transcript)|go:"GO:0004849"(uridine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0044206"(UMP salvage)|go:"GO:0044211"(CTP salvage)|interpro:IPR000764(Uridine kinase)|interpro:IPR006083(Phosphoribulokinase/uridine kinase)|interpro:IPR027417|interpro:IPR029920|rcsb pdb:2JEO|rcsb pdb:2UVQ|reactome:R-HSA-73614|entrezgene/locuslink:83549(identity) intact:EBI-16434688(see-also) isoform-comment:"Ref.8 (AAH15547) sequence is in conflict in position: 180:A->T." - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZBmfkyHv6PVOkOa7ZJtebWdEOtQ9606 rogid:SPTYxIH9wm04Tx4T1A+EV7HZ4Yk9606 rigid:mU8ztoEQaxor3Y/WJQBUe1bVML4 true - sufficient binding region:1-232 - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:P0C7X2 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475501 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429588(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:13DNDdpoLi9/tB8ON/n2pUOPSyw true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BQY4 uniprotkb:A0A0S2Z564 intact:EBI-372094|uniprotkb:Q9BR00|ensembl:ENSP00000360441 intact:EBI-16475127 psi-mi:rhxf2_human(display_long)|uniprotkb:RHOXF2(gene name)|psi-mi:RHOXF2(display_short)|uniprotkb:THG1(gene name synonym)|uniprotkb:Paired-like homeobox protein PEPP-2(gene name synonym)|uniprotkb:Testis homeobox gene 1(gene name synonym)|uniprotkb:PEPP2(gene name synonym) psi-mi:a0a0s2z564_human(display_long)|uniprotkb:ZBTB32(gene name)|psi-mi:ZBTB32(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475134 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_115887.1|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0042802"(identical protein binding)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|ensembl:ENSG00000131721(gene)|ensembl:ENST00000371388(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|entrezgene/locuslink:84528(identity) interpro:IPR000210(BTB/POZ-like)|interpro:IPR011333(BTB/POZ fold)|entrezgene/locuslink:27033(identity) intact:EBI-16432666(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:shpgPqf80gNt+gFDv1K+827ELUQ9606 rogid:dXjoGOAoXzVBI3tXnuT+/JmnJIM9606 rigid:aS1+FX83Ip8ZX9aWsk02EQem6/I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:P0C7X2 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475469 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429227(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:E4vr9aj5p7CCi/53FLdmZPadu4g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 uniprotkb:A0A0S2Z6P0 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 intact:EBI-16429989 psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475453 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16429089(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:iCF5+8S6UpoHwjr/vLJ9+G2sEJI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y2D8 uniprotkb:P0C7X2 intact:EBI-2212028|uniprotkb:B4DFE3|uniprotkb:J3KR02|uniprotkb:A8K8W0|uniprotkb:D3DT13|uniprotkb:Q6P2P8|uniprotkb:Q6ULS1|uniprotkb:Q7L168|uniprotkb:Q9UIX0|intact:EBI-10964529|ensembl:ENSP00000340279 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:adip_human(display_long)|uniprotkb:SSX2IP(gene name)|psi-mi:SSX2IP(display_short)|uniprotkb:KIAA0923(gene name synonym)|uniprotkb:Afadin DIL domain-interacting protein(gene name synonym)|uniprotkb:SSX2-interacting protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475437 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011538912.1|refseq:NP_001159765.1|refseq:NP_001159766.1|refseq:NP_001159767.1|refseq:NP_001159889.1|refseq:NP_054740.3|refseq:XP_005270484.1|refseq:XP_005270485.1|refseq:XP_006710394.1|refseq:XP_016855723.1|ensembl:ENSG00000117155(gene)|ensembl:ENST00000342203(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005912"(adherens junction)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007155"(cell adhesion)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0031252"(cell leading edge)|go:"GO:0032991"(protein-containing complex)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035020"(regulation of Rac protein signal transduction)|go:"GO:0035735"(intraciliary transport involved in cilium assembly)|go:"GO:0036064"(ciliary basal body)|go:"GO:0060271"(cilium assembly)|go:"GO:2000145"(regulation of cell motility)|interpro:IPR021622|mint:Q9Y2D8|entrezgene/locuslink:117178(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429089(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:E0VeMRF9SrpQKSJFP01XEbMjeF89606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:d2EC12ai7pLHxgPaxeCvObrf+IQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75525 uniprotkb:A0A0S2Z6P0 intact:EBI-722504|uniprotkb:Q6NUL8|uniprotkb:Q9UPA8|ensembl:ENSP00000348108 intact:EBI-16429989 psi-mi:khdr3_human(display_long)|uniprotkb:Sam68-like mammalian protein 2(gene name synonym)|uniprotkb:Sam68-like phosphotyrosine protein(gene name synonym)|uniprotkb:RNA-binding protein T-Star(gene name synonym)|uniprotkb:KHDRBS3(gene name)|psi-mi:KHDRBS3(display_short)|uniprotkb:SALP(gene name synonym)|uniprotkb:SLM2(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475421 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006549.1|ensembl:ENSG00000131773(gene)|ensembl:ENST00000355849(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|mint:O75525|rcsb pdb:5EL3|rcsb pdb:5ELR|rcsb pdb:5ELS|rcsb pdb:5ELT|rcsb pdb:5EMO|reactome:R-HSA-8849468|entrezgene/locuslink:10656(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16429035(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9ZoB3JVp0Q9nxeFRsmWhNThzWoE9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:efCBE+x1hLNa4AQxrv3yLIz/l4s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75525 uniprotkb:P0C7X2 intact:EBI-722504|uniprotkb:Q6NUL8|uniprotkb:Q9UPA8|ensembl:ENSP00000348108 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:khdr3_human(display_long)|uniprotkb:Sam68-like mammalian protein 2(gene name synonym)|uniprotkb:Sam68-like phosphotyrosine protein(gene name synonym)|uniprotkb:RNA-binding protein T-Star(gene name synonym)|uniprotkb:KHDRBS3(gene name)|psi-mi:KHDRBS3(display_short)|uniprotkb:SALP(gene name synonym)|uniprotkb:SLM2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475405 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006549.1|ensembl:ENSG00000131773(gene)|ensembl:ENST00000355849(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0017124"(SH3 domain binding)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|mint:O75525|rcsb pdb:5EL3|rcsb pdb:5ELR|rcsb pdb:5ELS|rcsb pdb:5ELT|rcsb pdb:5EMO|reactome:R-HSA-8849468|entrezgene/locuslink:10656(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429035(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9ZoB3JVp0Q9nxeFRsmWhNThzWoE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:0LyYoJdbIGqZ6fgrBwqqpyElgfI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15162 uniprotkb:A0A0S2Z6P0 intact:EBI-740019|ensembl:ENSP00000345494|uniprotkb:B2R8H8|uniprotkb:B4DTE8 intact:EBI-16429989 psi-mi:pls1_human(display_long)|uniprotkb:PLSCR1(gene name)|psi-mi:PLSCR1(display_short)|uniprotkb:"Ca(2+)-dependent phospholipid scramblase 1"(gene name synonym)|uniprotkb:Erythrocyte phospholipid scramblase(gene name synonym)|uniprotkb:MmTRA1b(gene name synonym)|uniprotkb:"Mg(2+)-dependent nuclease"(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475389 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000188313(gene)|ensembl:ENST00000342435(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001618"(virus receptor activity)|go:"GO:0003677"(DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006659"(phosphatidylserine biosynthetic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006953"(acute-phase response)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010288"(response to lead ion)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0017121"(plasma membrane phospholipid scrambling)|go:"GO:0017124"(SH3 domain binding)|ensembl:ENSP00000345494|ensembl:ENST00000448787|ensembl:ENSP00000411675|refseq:NP_066928.1|go:"GO:0017128"(phospholipid scramblase activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0030168"(platelet activation)|go:"GO:0032791"(lead ion binding)|go:"GO:0033003"(regulation of mast cell activation)|go:"GO:0035456"(response to interferon-beta)|go:"GO:0042609"(CD4 receptor binding)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045121"(membrane raft)|go:"GO:0045340"(mercury ion binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051607"(defense response to virus)|go:"GO:0060368"(regulation of Fc receptor mediated stimulatory signaling pathway)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070782"(phosphatidylserine exposure on apoptotic cell surface)|go:"GO:1905820"(positive regulation of chromosome separation)|go:"GO:2000373"("positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity")|interpro:IPR005552(Scramblase)|mint:O15162|rcsb pdb:1Y2A|refseq:XP_011511209.1|refseq:XP_011511206.1|refseq:XP_005247595.1|refseq:XP_011511208.1|refseq:XP_016862118.1|entrezgene/locuslink:5359(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16429025(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:XudfvUkrZbB28t9tpFkokgnDFGc9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:jRHI67I5lOmWoOXVBatytEwalGs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15162 uniprotkb:P0C7X2 intact:EBI-740019|ensembl:ENSP00000345494|uniprotkb:B2R8H8|uniprotkb:B4DTE8 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:pls1_human(display_long)|uniprotkb:PLSCR1(gene name)|psi-mi:PLSCR1(display_short)|uniprotkb:"Ca(2+)-dependent phospholipid scramblase 1"(gene name synonym)|uniprotkb:Erythrocyte phospholipid scramblase(gene name synonym)|uniprotkb:MmTRA1b(gene name synonym)|uniprotkb:"Mg(2+)-dependent nuclease"(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475373 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000188313(gene)|ensembl:ENST00000342435(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0001618"(virus receptor activity)|go:"GO:0003677"(DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005154"(epidermal growth factor receptor binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006659"(phosphatidylserine biosynthetic process)|go:"GO:0006915"(apoptotic process)|go:"GO:0006953"(acute-phase response)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010288"(response to lead ion)|go:"GO:0010628"(positive regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0017121"(plasma membrane phospholipid scrambling)|go:"GO:0017124"(SH3 domain binding)|ensembl:ENSP00000345494|ensembl:ENST00000448787|ensembl:ENSP00000411675|refseq:NP_066928.1|go:"GO:0017128"(phospholipid scramblase activity)|go:"GO:0019899"(enzyme binding)|go:"GO:0030168"(platelet activation)|go:"GO:0032791"(lead ion binding)|go:"GO:0033003"(regulation of mast cell activation)|go:"GO:0035456"(response to interferon-beta)|go:"GO:0042609"(CD4 receptor binding)|go:"GO:0045071"(negative regulation of viral genome replication)|go:"GO:0045089"(positive regulation of innate immune response)|go:"GO:0045121"(membrane raft)|go:"GO:0045340"(mercury ion binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050765"(negative regulation of phagocytosis)|go:"GO:0051607"(defense response to virus)|go:"GO:0060368"(regulation of Fc receptor mediated stimulatory signaling pathway)|go:"GO:0062023"(collagen-containing extracellular matrix)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070782"(phosphatidylserine exposure on apoptotic cell surface)|go:"GO:1905820"(positive regulation of chromosome separation)|go:"GO:2000373"("positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity")|interpro:IPR005552(Scramblase)|mint:O15162|rcsb pdb:1Y2A|refseq:XP_011511209.1|refseq:XP_011511206.1|refseq:XP_005247595.1|refseq:XP_011511208.1|refseq:XP_016862118.1|entrezgene/locuslink:5359(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429025(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:XudfvUkrZbB28t9tpFkokgnDFGc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:eCuRq+1r0BQmzAhW61hLbDO29CM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P17040-4 uniprotkb:Q969J2 intact:EBI-16440054|ensembl:ENSP00000362512 intact:EBI-2818641|uniprotkb:B2RE32|uniprotkb:Q5U7L4|intact:EBI-28979011|ensembl:ENSP00000366509 psi-mi:p17040-4(display_long)|uniprotkb:Zinc finger protein 31(gene name synonym)|uniprotkb:Zinc finger protein 360(gene name synonym)|uniprotkb:Zinc finger protein KOX29(gene name synonym)|uniprotkb:ZSCAN20(gene name)|psi-mi:ZSCAN20(display_short)|uniprotkb:KOX29(gene name synonym)|uniprotkb:ZNF31(gene name synonym)|uniprotkb:ZNF360(gene name synonym) psi-mi:zksc4_human(display_long)|uniprotkb:ZKSCAN4(gene name)|psi-mi:ZKSCAN4(display_short)|uniprotkb:ZNF307(gene name synonym)|uniprotkb:ZNF427(gene name synonym)|uniprotkb:P373c6.1(gene name synonym)|uniprotkb:Zinc finger protein 307(gene name synonym)|uniprotkb:Zinc finger protein 427(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475357 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000121903(gene)|ensembl:ENST00000373413(transcript)|intact:EBI-745838(isoform-parent)|entrezgene/locuslink:7579(identity) refseq:NP_061983.2|ensembl:ENSP00000366509|ensembl:ENSG00000187626(gene)|ensembl:ENST00000377294(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR003309(Transcriptional regulator SCAN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|interpro:IPR038269|mint:Q969J2|reactome:R-HSA-212436|refseq:XP_005249152.1|entrezgene/locuslink:387032(identity) intact:EBI-16440062(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:qHCR8fgETOY4paUgFW7PPM/aGT89606 rogid:5TWhAtzfmCXHkOSbjKwjgLIsCcs9606 rigid:yktMyOELVtXF00ECaS9/pFP2Tj4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O15151 uniprotkb:Q969J2 intact:EBI-398437|uniprotkb:Q32SL2|uniprotkb:Q6GS18|uniprotkb:Q8IV83|intact:EBI-3932059|uniprotkb:Q2M2Y2|intact:EBI-28988565|ensembl:ENSP00000356150 intact:EBI-2818641|uniprotkb:B2RE32|uniprotkb:Q5U7L4|intact:EBI-28979011|ensembl:ENSP00000366509 psi-mi:mdm4_human(display_long)|uniprotkb:MDM4(gene name)|psi-mi:MDM4(display_short)|uniprotkb:MDMX(gene name synonym)|uniprotkb:p53-binding protein Mdm4(gene name synonym)|uniprotkb:Mdm2-like p53-binding protein(gene name synonym)|uniprotkb:Protein Mdmx(gene name synonym)|uniprotkb:Double minute 4 protein(gene name synonym) psi-mi:zksc4_human(display_long)|uniprotkb:ZKSCAN4(gene name)|psi-mi:ZKSCAN4(display_short)|uniprotkb:ZNF307(gene name synonym)|uniprotkb:ZNF427(gene name synonym)|uniprotkb:P373c6.1(gene name synonym)|uniprotkb:Zinc finger protein 307(gene name synonym)|uniprotkb:Zinc finger protein 427(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475341 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002384.2|refseq:NP_001191101.1|refseq:NP_001191100.1|ensembl:ENSP00000356150|ensembl:ENST00000367183|ensembl:ENSP00000356151|ensembl:ENST00000454264|ensembl:ENSP00000396840|refseq:NP_001265445.1|refseq:NP_001265446.1|refseq:NP_001265447.1|refseq:NP_001265448.1|dip:DIP-24199N|reactome:R-HSA-69541|reactome:R-HSA-6804760|ensembl:ENSG00000198625(gene)|ensembl:ENST00000367182(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003170"(heart valve development)|go:"GO:0003181"(atrioventricular valve morphogenesis)|go:"GO:0003203"(endocardial cushion morphogenesis)|go:"GO:0003281"(ventricular septum development)|go:"GO:0003283"(atrial septum development)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0019899"(enzyme binding)|go:"GO:0030330"(DNA damage response, signal transduction by p53 class mediator)|go:"GO:0042177"(negative regulation of protein catabolic process)|go:"GO:0043066"(negative regulation of apoptotic process)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050821"(protein stabilization)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0071456"(cellular response to hypoxia)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001876(Zinc finger, RanBP2-type)|interpro:IPR003121(SWIB/MDM2)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR015458(MDM4/MDMX protein)|interpro:IPR016495(p53 negative regulator Mdm2/Mdm4)|interpro:IPR036443|interpro:IPR036885|mint:O15151|rcsb pdb:2CR8|rcsb pdb:2MWY|rcsb pdb:2N06|rcsb pdb:2N0U|rcsb pdb:2N0W|rcsb pdb:2N14|rcsb pdb:2VJE|rcsb pdb:2VJF|rcsb pdb:2VYR|rcsb pdb:3DAB|rcsb pdb:3EQY|rcsb pdb:3FDO|rcsb pdb:3FE7|rcsb pdb:3FEA|rcsb pdb:3JZO|rcsb pdb:3JZP|rcsb pdb:3JZQ|rcsb pdb:3LBJ|rcsb pdb:3MQR|rcsb pdb:3U15|rcsb pdb:4RXZ|rcsb pdb:5MNJ|rcsb pdb:5UML|rcsb pdb:5VK1|rcsb pdb:6Q9Q|rcsb pdb:6Q9S|rcsb pdb:6Q9U|rcsb pdb:6Q9W|rcsb pdb:6Q9Y|rcsb pdb:7C3Q|rcsb pdb:7C3Y|rcsb pdb:7C44|rcsb pdb:7EL4|reactome:R-HSA-2559580|reactome:R-HSA-2559585|reactome:R-HSA-5689880|reactome:R-HSA-6804756|reactome:R-HSA-6804757|entrezgene/locuslink:4194(identity) refseq:NP_061983.2|ensembl:ENSP00000366509|ensembl:ENSG00000187626(gene)|ensembl:ENST00000377294(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR003309(Transcriptional regulator SCAN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|interpro:IPR038269|mint:Q969J2|reactome:R-HSA-212436|refseq:XP_005249152.1|entrezgene/locuslink:387032(identity) intact:EBI-16431554(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:zAL03wG+qlPT5folNjx1ZUJhx/A9606 rogid:5TWhAtzfmCXHkOSbjKwjgLIsCcs9606 rigid:1D5tAwqqnvalY143E54lkEONOCE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6P088 uniprotkb:Q969J2 intact:EBI-10196963|ensembl:ENSP00000438048 intact:EBI-2818641|uniprotkb:B2RE32|uniprotkb:Q5U7L4|intact:EBI-28979011|ensembl:ENSP00000366509 psi-mi:q6p088_human(display_long)|uniprotkb:ZNF483(gene name)|psi-mi:ZNF483(display_short) psi-mi:zksc4_human(display_long)|uniprotkb:ZKSCAN4(gene name)|psi-mi:ZKSCAN4(display_short)|uniprotkb:ZNF307(gene name synonym)|uniprotkb:ZNF427(gene name synonym)|uniprotkb:P373c6.1(gene name synonym)|uniprotkb:Zinc finger protein 307(gene name synonym)|uniprotkb:Zinc finger protein 427(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475325 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_016869828.1|ensembl:ENSG00000173258(gene)|ensembl:ENST00000355824(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR003309(Transcriptional regulator SCAN)|interpro:IPR036051|interpro:IPR038269|entrezgene/locuslink:158399(identity) refseq:NP_061983.2|ensembl:ENSP00000366509|ensembl:ENSG00000187626(gene)|ensembl:ENST00000377294(transcript)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR003309(Transcriptional regulator SCAN)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|interpro:IPR038269|mint:Q969J2|reactome:R-HSA-212436|refseq:XP_005249152.1|entrezgene/locuslink:387032(identity) intact:EBI-16431096(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SXAiqzd6g4YN0PLaLlPAbSnBTMU9606 rogid:5TWhAtzfmCXHkOSbjKwjgLIsCcs9606 rigid:CjDEwT5mY3l5+Tln8Xtmx0gBdmA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:A0A0S2Z6H0 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-16428984 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:a0a0s2z6h0_human(display_long)|uniprotkb:ZGPAT(gene name)|psi-mi:ZGPAT(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475309 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) interpro:IPR041367|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|interpro:IPR000467(D111/G-patch)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR002999(Tudor)|interpro:IPR036855|interpro:IPR043560|entrezgene/locuslink:84619(identity) intact:EBI-16436214(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:ezg+DgS3ra4uCIomSOVb3WD4oxU9606 rigid:5Z0yNONIUHLT6bUuHxBeQPDQRz4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7L4P6 uniprotkb:Q8N5A5-2 intact:EBI-724373|ensembl:ENSP00000360899|uniprotkb:D3DQ27|uniprotkb:Q96A62|uniprotkb:Q9HAI3|intact:EBI-3044085 intact:EBI-10183064|ensembl:ENSP00000348242|ensembl:ENSP00000358984|ensembl:ENSP00000391176 psi-mi:bend5_human(display_long)|uniprotkb:BEND5(gene name)|psi-mi:BEND5(display_short)|uniprotkb:C1orf165(gene name synonym) psi-mi:q8n5a5-2(display_long)|uniprotkb:ZGPAT(gene name)|psi-mi:ZGPAT(display_short)|uniprotkb:G patch domain-containing protein 6(gene name synonym)|uniprotkb:GPATC6(gene name synonym)|uniprotkb:GPATCH6(gene name synonym)|uniprotkb:KIAA1847(gene name synonym)|uniprotkb:ZC3H9(gene name synonym)|uniprotkb:ZC3HDC9(gene name synonym)|uniprotkb:ZIP(gene name synonym)|uniprotkb:Zinc finger CCCH domain-containing protein 9(gene name synonym)|uniprotkb:Zinc finger and G patch domain-containing protein(gene name synonym) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475293 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_078879.2|ensembl:ENSG00000162373(gene)|ensembl:ENST00000371833(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR018379|interpro:IPR040391|mint:Q7L4P6|refseq:NP_001289011.1|refseq:XP_011540444.1|refseq:XP_016857823.1|entrezgene/locuslink:79656(identity) intact:EBI-3439227(isoform-parent)|ensembl:ENSG00000197114(gene)|ensembl:ENST00000355969(transcript)|ensembl:ENST00000369967(transcript)|ensembl:ENST00000448100(transcript)|uniprotkb:Q8N5A5-2(isoform-parent)|entrezgene/locuslink:84619(identity) intact:EBI-16435224(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:R6OwgNU76FX6tqLRdHVmzEgK8EE9606 rogid:DoBoYNv5QTlYVrPNdQvRKrcyeqA9606 rigid:2q8uLKQ1+8gLn/nJa6JM6jdeycc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6FHY5 intact:EBI-16475183 intact:EBI-16439278 - psi-mi:q6fhy5_human(display_long)|uniprotkb:MEOX2(gene name)|psi-mi:MEOX2(display_short) psi-mi:"ccsb isoform id: zcwpw1_5"(display_short)|psi-mi:EBI-16475183(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017970|interpro:IPR001356(Homeobox)|interpro:IPR020479|interpro:IPR042634|entrezgene/locuslink:4223(identity) entrezgene/locuslink:55063(identity) intact:EBI-16439747(see-also)|intact:EBI-16439759(see-also)|intact:EBI-16439769(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:1YE6tvnIb7ZIF3P7OAZfhMWwxxI9606 rogid:CH+EjdC75gRp4VN7ew7pFgp2WsU9606 rigid:6eFBKinLIBak/o2vAtYUyuKrDNM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 intact:EBI-16475183 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 - psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:"ccsb isoform id: zcwpw1_5"(display_short)|psi-mi:EBI-16475183(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) entrezgene/locuslink:55063(identity) intact:EBI-16436997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:CH+EjdC75gRp4VN7ew7pFgp2WsU9606 rigid:oIgQrd9USLLOff06/8w/7mXXRVw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:A0A0S2Z5E1 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-16439757 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:a0a0s2z5e1_human(display_long)|uniprotkb:ZCWPW1(gene name)|psi-mi:ZCWPW1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475243 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) go:"GO:0008270"(zinc ion binding)|interpro:IPR000313(PWWP)|interpro:IPR011124(Zinc finger, CW-type)|interpro:IPR042778|entrezgene/locuslink:55063(identity) intact:EBI-16436997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:kd2aWGkvURF0tE0/nLpaz7LijXc9606 rigid:vhpu/2MbKHxQh4pQzVQ0H7e2NW0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:A0A0S2Z5J5 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-16475219 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:a0a0s2z5j5_human(display_long)|uniprotkb:ZCWPW1(gene name)|psi-mi:ZCWPW1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475227 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) go:"GO:0008270"(zinc ion binding)|interpro:IPR000313(PWWP)|interpro:IPR011124(Zinc finger, CW-type)|interpro:IPR042778|entrezgene/locuslink:55063(identity) intact:EBI-16436997(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:p//ETQJAR8nI0LAzxAcx/GOpaJA9606 rigid:zweV7vJSqTb6rapt8bHCXadtp2U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08AM6 uniprotkb:Q9H0M4-4 intact:EBI-2107455|uniprotkb:Q13174|uniprotkb:Q6IA12|uniprotkb:Q7L4Y1|uniprotkb:Q9BW96|uniprotkb:Q9H6V6|uniprotkb:B3KPJ5|uniprotkb:B3KSM8|ensembl:ENSP00000261776 intact:EBI-16429732|ensembl:ENSP00000419187 psi-mi:vac14_human(display_long)|uniprotkb:Tax1-binding protein 2(gene name synonym)|uniprotkb:VAC14(gene name)|psi-mi:VAC14(display_short)|uniprotkb:TAX1BP2(gene name synonym)|uniprotkb:TRX(gene name synonym) psi-mi:q9h0m4-4(display_long)|uniprotkb:ZCWPW1(gene name)|psi-mi:ZCWPW1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060522.3|ensembl:ENSG00000103043(gene)|ensembl:ENST00000261776(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000306"(extrinsic component of vacuolar membrane)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0007165"(signal transduction)|go:"GO:0010008"(endosome membrane)|go:"GO:0031901"(early endosome membrane)|go:"GO:0031902"(late endosome membrane)|go:"GO:0033674"(positive regulation of kinase activity)|go:"GO:0038023"(signaling receptor activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0070772"(PAS complex)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021841|interpro:IPR026825|mint:Q08AM6|rcsb pdb:7K1Y|reactome:R-HSA-1660514|reactome:R-HSA-1660516|reactome:R-HSA-1660517|entrezgene/locuslink:55697(identity) ensembl:ENST00000490721(transcript)|ensembl:ENSG00000078487(gene)|intact:EBI-8659823(isoform-parent)|entrezgene/locuslink:55063(identity) intact:EBI-16436997(see-also) - isoform-comment:No experimental confirmation available. caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S9syIZ/DKHNbOM0Nw9oZP5F+AvA9606 rogid:pfDCuBoXLZLhuU/JiaUzpFUAmbU9606 rigid:r8+ua2OWvjHqCjqpkcjmBnzU5WU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 intact:EBI-16475183 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 - psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:"ccsb isoform id: zcwpw1_5"(display_short)|psi-mi:EBI-16475183(display_long) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475186 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) entrezgene/locuslink:55063(identity) intact:EBI-16429737(see-also)|intact:EBI-16429749(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:CH+EjdC75gRp4VN7ew7pFgp2WsU9606 rigid:tjq25KMBU4bcScfnO2ItbNfnIZs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96JM7-2 uniprotkb:A0A0S2Z5E1 intact:EBI-11985629|ensembl:ENSP00000357121|ensembl:ENSP00000436706|ensembl:ENSP00000437185 intact:EBI-16439757 psi-mi:q96jm7-2(display_long)|uniprotkb:L3MBTL3(gene name)|psi-mi:L3MBTL3(display_short)|uniprotkb:KIAA1798(gene name synonym)|uniprotkb:MBT-1(gene name synonym)|uniprotkb:MBT1(gene name synonym) psi-mi:a0a0s2z5e1_human(display_long)|uniprotkb:ZCWPW1(gene name)|psi-mi:ZCWPW1(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475166 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:Q96JM7-2(isoform-parent)|ensembl:ENSG00000198945(gene)|ensembl:ENST00000368139(transcript)|ensembl:ENST00000526019(transcript)|ensembl:ENST00000533560(transcript)|intact:EBI-2686809(isoform-parent)|entrezgene/locuslink:84456(identity) go:"GO:0008270"(zinc ion binding)|interpro:IPR000313(PWWP)|interpro:IPR011124(Zinc finger, CW-type)|interpro:IPR042778|entrezgene/locuslink:55063(identity) intact:EBI-16429737(see-also)|intact:EBI-16429749(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:kyV/W+LGXQyvpNVA8XqVS88scjg9606 rogid:kd2aWGkvURF0tE0/nLpaz7LijXc9606 rigid:IbsqEGGpNVP7kelfNACKtxgAS+M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q93062-3 uniprotkb:A0A0S2Z564 intact:EBI-740343|ensembl:ENSP00000340176 intact:EBI-16475127 psi-mi:q93062-3(display_long)|uniprotkb:RBPMS(gene name)|psi-mi:RBPMS(display_short)|uniprotkb:HERMES(gene name synonym)|uniprotkb:Heart and RRM expressed sequence(gene name synonym) psi-mi:a0a0s2z564_human(display_long)|uniprotkb:ZBTB32(gene name)|psi-mi:ZBTB32(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475150 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-740322(rbpms_human)|uniprotkb:Q93062-3(isoform-parent)|ensembl:ENSG00000157110(gene)|ensembl:ENST00000339877(transcript)|entrezgene/locuslink:11030(identity) interpro:IPR000210(BTB/POZ-like)|interpro:IPR011333(BTB/POZ fold)|entrezgene/locuslink:27033(identity) intact:EBI-16433779(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:nlPMQAJoKEbPYBwsL3xodmCKd7c9606 rogid:dXjoGOAoXzVBI3tXnuT+/JmnJIM9606 rigid:TCjVm5G4ehiG2PWbM1wIXS89oFc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8ND90 uniprotkb:A0A0S2Z6P0 intact:EBI-302345|uniprotkb:O95144|uniprotkb:Q8NG07|ensembl:ENSP00000318914|uniprotkb:A8K4L5 intact:EBI-16429989 psi-mi:pnma1_human(display_long)|uniprotkb:PNMA1(gene name)|psi-mi:PNMA1(display_short)|uniprotkb:MA1(gene name synonym)|uniprotkb:Neuron- and testis-specific protein 1(gene name synonym)|uniprotkb:37 kDa neuronal protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475485 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006020.4|ensembl:ENSG00000176903(gene)|ensembl:ENST00000316836(transcript)|go:"GO:0002437"(inflammatory response to antigenic stimulus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026528|mint:Q8ND90|entrezgene/locuslink:9240(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16429227(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/lx3CB7d/dv4xIgWQrCETPA0Qcw9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:N/C6x8xI+eqpBTTZ0Rq/d14UIhQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NA61-2 uniprotkb:A0A0S2Z6P0 intact:EBI-11524851|ensembl:ENSP00000368249|ensembl:ENSP00000480148 intact:EBI-16429989 psi-mi:q8na61-2(display_long)|uniprotkb:CBY2(gene name)|psi-mi:CBY2(display_short)|uniprotkb:SPERT(gene name synonym)|uniprotkb:Spermatid-associated protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476070 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-741724(isoform-parent)|ensembl:ENSG00000174015(gene)|ensembl:ENST00000378966(transcript)|ensembl:ENST00000610924(transcript)|uniprotkb:Q8NA61-2(isoform-parent)|entrezgene/locuslink:220082(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432394(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SogYcXGGMYRYzB9xKC5o0pEtsDs9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:rgDgdU4CKWdBP7IZcD3lve7pp0Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UJV3-2 uniprotkb:A0A0S2Z6P0 intact:EBI-10172526|ensembl:ENSP00000413976 intact:EBI-16429989 psi-mi:q9ujv3-2(display_long)|uniprotkb:RING-type E3 ubiquitin transferase MID2(gene name synonym)|uniprotkb:FXY2(gene name synonym)|uniprotkb:Midin-2(gene name synonym)|uniprotkb:Midline defect 2(gene name synonym)|uniprotkb:Midline-2(gene name synonym)|uniprotkb:RING finger protein 60(gene name synonym)|uniprotkb:RNF60(gene name synonym)|uniprotkb:TRIM1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 1(gene name synonym)|uniprotkb:MID2(gene name)|psi-mi:MID2(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475541 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751983(isoform-parent)|uniprotkb:Q9UJV3-2(isoform-parent)|ensembl:ENSG00000080561(gene)|ensembl:ENST00000443968(transcript)|entrezgene/locuslink:11043(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16429588(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:/FJ+V2H7SaWon7caUWkEkmHFVxQ9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:Ke0tNxslAf5HvHAmhu86mWKedok true sufficient binding region:21-705 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 uniprotkb:A0A0S2Z6P0 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 intact:EBI-16429989 psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476038 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432324(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:flMUDK2T89keoZpeHqsABAH6ECA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NHQ1 uniprotkb:P0C7X2 intact:EBI-739624|ensembl:ENSP00000264982|ensembl:ENSP00000419231|uniprotkb:Q96B31|uniprotkb:Q9H2C3|uniprotkb:Q9H2Z1|uniprotkb:Q9H940|uniprotkb:D3DNE9|uniprotkb:B7Z5I8|uniprotkb:B7Z7E8|uniprotkb:F5GZX8 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:cep70_human(display_long)|uniprotkb:CEP70(gene name)|psi-mi:CEP70(display_short)|uniprotkb:BITE(gene name synonym)|uniprotkb:p10-binding protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476022 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000114107(gene)|ensembl:ENST00000264982(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0043015"(gamma-tubulin binding)|go:"GO:0060271"(cilium assembly)|go:"GO:0070507"(regulation of microtubule cytoskeleton organization)|interpro:IPR019734|interpro:IPR037692|mint:Q8NHQ1|reactome:R-HSA-2565942|reactome:R-HSA-380259|reactome:R-HSA-380270|ensembl:ENST00000484888(transcript)|reactome:R-HSA-380284|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|refseq:NP_077817.2|refseq:XP_016862764.1|refseq:NP_001275893.1|refseq:NP_001275894.1|refseq:NP_001275895.1|refseq:NP_001275896.1|refseq:NP_001307527.1|refseq:NP_001307529.1|entrezgene/locuslink:80321(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432324(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:S4yveQWcvdVtAUX65gqrJ5Dv0Mc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:VGjafZth0tz0qhwBEq3uyhHTUec true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:P0C7X2 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476005 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432188(see-also)|intact:EBI-16432198(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:zt+Cd+Sd/TKTSyCodArGTl6Zato true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NT76 uniprotkb:A0A0S2Z6P0 intact:EBI-2549423|ensembl:ENSP00000287701|ensembl:ENSP00000380516|uniprotkb:A8K3R8|uniprotkb:Q3Y6P1|uniprotkb:Q96GS5|uniprotkb:Q9H701|uniprotkb:A4K385|uniprotkb:B4DHY5|uniprotkb:D3DSU0 intact:EBI-16429989 psi-mi:hmbx1_human(display_long)|uniprotkb:HMBOX1(gene name)|psi-mi:HMBOX1(display_short)|uniprotkb:HOT1(gene name synonym)|uniprotkb:Homeobox telomere-binding protein 1(gene name synonym)|uniprotkb:TAH1(gene name synonym)|uniprotkb:Telomere-associated homeobox-containing protein 1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475989 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000147421(gene)|ensembl:ENST00000287701(transcript)|ensembl:ENST00000397358(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0003691"(double-stranded telomeric DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0015030"(Cajal body)|go:"GO:0016604"(nuclear body)|go:"GO:0016605"(PML body)|go:"GO:0032212"(positive regulation of telomere maintenance via telomerase)|go:"GO:0035563"(positive regulation of chromatin binding)|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051972"(regulation of telomerase activity)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR006899(Hepatocyte nuclear factor 1, N-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR010982(Lambda repressor-like, DNA-binding)|interpro:IPR040363|mint:Q6NT76|rcsb pdb:2CUF|rcsb pdb:4J19|interpro:IPR001387(Helix-turn-helix type 3)|refseq:NP_001129198.1|refseq:NP_078843.2|refseq:NP_001311312.1|refseq:NP_001311313.1|refseq:NP_001311314.1|refseq:NP_001311315.1|refseq:NP_001311316.1|refseq:NP_001311317.1|refseq:NP_001311318.1|refseq:NP_001311319.1|refseq:NP_001311320.1|refseq:NP_001311321.1|refseq:NP_001311322.1|refseq:NP_001311323.1|refseq:NP_001311324.1|refseq:NP_001311311.1|refseq:NP_001317427.1|refseq:XP_016869314.1|entrezgene/locuslink:79618(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432078(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Vap52i4o7ETkoZDzQ7zQqCHXVCA9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:fl+dfcxwO4iyM+RwRA197GEvfW0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NT76 uniprotkb:P0C7X2 intact:EBI-2549423|ensembl:ENSP00000287701|ensembl:ENSP00000380516|uniprotkb:A8K3R8|uniprotkb:Q3Y6P1|uniprotkb:Q96GS5|uniprotkb:Q9H701|uniprotkb:A4K385|uniprotkb:B4DHY5|uniprotkb:D3DSU0 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:hmbx1_human(display_long)|uniprotkb:HMBOX1(gene name)|psi-mi:HMBOX1(display_short)|uniprotkb:HOT1(gene name synonym)|uniprotkb:Homeobox telomere-binding protein 1(gene name synonym)|uniprotkb:TAH1(gene name synonym)|uniprotkb:Telomere-associated homeobox-containing protein 1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475973 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000147421(gene)|ensembl:ENST00000287701(transcript)|ensembl:ENST00000397358(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0003691"(double-stranded telomeric DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0015030"(Cajal body)|go:"GO:0016604"(nuclear body)|go:"GO:0016605"(PML body)|go:"GO:0032212"(positive regulation of telomere maintenance via telomerase)|go:"GO:0035563"(positive regulation of chromatin binding)|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0043565"(sequence-specific DNA binding)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0051972"(regulation of telomerase activity)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR006899(Hepatocyte nuclear factor 1, N-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR010982(Lambda repressor-like, DNA-binding)|interpro:IPR040363|mint:Q6NT76|rcsb pdb:2CUF|rcsb pdb:4J19|interpro:IPR001387(Helix-turn-helix type 3)|refseq:NP_001129198.1|refseq:NP_078843.2|refseq:NP_001311312.1|refseq:NP_001311313.1|refseq:NP_001311314.1|refseq:NP_001311315.1|refseq:NP_001311316.1|refseq:NP_001311317.1|refseq:NP_001311318.1|refseq:NP_001311319.1|refseq:NP_001311320.1|refseq:NP_001311321.1|refseq:NP_001311322.1|refseq:NP_001311323.1|refseq:NP_001311324.1|refseq:NP_001311311.1|refseq:NP_001317427.1|refseq:XP_016869314.1|entrezgene/locuslink:79618(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432078(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Vap52i4o7ETkoZDzQ7zQqCHXVCA9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:o8mReh9jULlmd8ynRSpt5OF4fEw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:P0C7X2 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475953 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432034(see-also)|intact:EBI-16432046(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:Q6vQ35jSx5hOsBoj1ho5wRdaZqk true sufficient binding region:13-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H257-3 uniprotkb:A0A0S2Z6P0 intact:EBI-16431743|ensembl:ENSP00000451368 intact:EBI-16429989 psi-mi:q9h257-3(display_long)|uniprotkb:CARD9(gene name)|psi-mi:CARD9(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475937 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751319(isoform-parent)|ensembl:ENSG00000187796(gene)|ensembl:ENST00000489932(transcript)|uniprotkb:Q9H257-3(isoform-parent)|entrezgene/locuslink:64170(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16431768(see-also) isoform-comment:No experimental confirmation available. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8ZrBhVHfPbIFpll5feiFDiUdyYs9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:i3vd8GNtaQve3GdAnon6OMv1ICw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H257-3 uniprotkb:P0C7X2 intact:EBI-16431743|ensembl:ENSP00000451368 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q9h257-3(display_long)|uniprotkb:CARD9(gene name)|psi-mi:CARD9(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475921 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751319(isoform-parent)|ensembl:ENSG00000187796(gene)|ensembl:ENST00000489932(transcript)|uniprotkb:Q9H257-3(isoform-parent)|entrezgene/locuslink:64170(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431768(see-also) isoform-comment:No experimental confirmation available. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8ZrBhVHfPbIFpll5feiFDiUdyYs9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:KchmooM8U5tY8LsmQlNnKxtKLd8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6NUQ1 uniprotkb:P0C7X2 intact:EBI-726876|uniprotkb:Q75MG9|uniprotkb:Q75MH0|uniprotkb:Q96IW8|uniprotkb:Q9H229|uniprotkb:Q9HAD9|intact:EBI-28981798|ensembl:ENSP00000257700 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:rint1_human(display_long)|uniprotkb:RAD50 interactor 1(gene name synonym)|uniprotkb:RINT1(gene name)|psi-mi:RINT1(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475904 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000135249(gene)|ensembl:ENST00000257700(transcript)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0007095"(mitotic G2 DNA damage checkpoint signaling)|go:"GO:0015031"(protein transport)|go:"GO:0060628"(regulation of ER to Golgi vesicle-mediated transport)|go:"GO:0070939"(Dsl1/NZR complex)|interpro:IPR007528(RINT-1/TIP-1)|interpro:IPR042044|reactome:R-HSA-6811434|refseq:NP_068749.3|ensembl:ENSP00000257700|dip:DIP-36477N|entrezgene/locuslink:60561(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431669(see-also)|intact:EBI-16431679(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUzUSBI8f6ednxeVnP97ifOMoPc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:4/SghshfxNAL4xsGLS03RMul0iU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UL42 uniprotkb:A0A0S2Z6P0 intact:EBI-302355|uniprotkb:O94959|uniprotkb:O95145|uniprotkb:Q49A18|uniprotkb:Q9UL43|ensembl:ENSP00000429344|uniprotkb:B3KNY9 intact:EBI-16429989 psi-mi:pnma2_human(display_long)|uniprotkb:PNMA2(gene name)|psi-mi:PNMA2(display_short)|uniprotkb:KIAA0883(gene name synonym)|uniprotkb:MA2(gene name synonym)|uniprotkb:Onconeuronal antigen Ma2(gene name synonym)|uniprotkb:Paraneoplastic neuronal antigen MM2(gene name synonym)|uniprotkb:40 kDa neuronal protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475888 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009188.1|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026525|mint:Q9UL42|ensembl:ENSG00000240694(gene)|ensembl:ENST00000522362(transcript)|go:"GO:0005730"(nucleolus)|refseq:XP_011542667.1|entrezgene/locuslink:10687(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16431277(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GeMwoq69tYJJJc5lI0/bSAGlsCQ9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:zLYaqQvfwYpaWaekWC/G3CIPeC4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9UL42 uniprotkb:P0C7X2 intact:EBI-302355|uniprotkb:O94959|uniprotkb:O95145|uniprotkb:Q49A18|uniprotkb:Q9UL43|ensembl:ENSP00000429344|uniprotkb:B3KNY9 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:pnma2_human(display_long)|uniprotkb:PNMA2(gene name)|psi-mi:PNMA2(display_short)|uniprotkb:KIAA0883(gene name synonym)|uniprotkb:MA2(gene name synonym)|uniprotkb:Onconeuronal antigen Ma2(gene name synonym)|uniprotkb:Paraneoplastic neuronal antigen MM2(gene name synonym)|uniprotkb:40 kDa neuronal protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475872 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009188.1|go:"GO:0043065"(positive regulation of apoptotic process)|interpro:IPR026523|interpro:IPR026525|mint:Q9UL42|ensembl:ENSG00000240694(gene)|ensembl:ENST00000522362(transcript)|go:"GO:0005730"(nucleolus)|refseq:XP_011542667.1|entrezgene/locuslink:10687(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431277(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GeMwoq69tYJJJc5lI0/bSAGlsCQ9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:2nqrQQJspQh0TL/GPftu1VW6xz0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13064 uniprotkb:P0C7X2 intact:EBI-2340269|ensembl:ENSP00000313881 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:mkrn3_human(display_long)|uniprotkb:MKRN3(gene name)|psi-mi:MKRN3(display_short)|uniprotkb:D15S9(gene name synonym)|uniprotkb:RNF63(gene name synonym)|uniprotkb:ZNF127(gene name synonym)|uniprotkb:Zinc finger protein 127(gene name synonym)|uniprotkb:RING finger protein 63(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase makorin-3(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475856 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005655.1|ensembl:ENSG00000179455(gene)|ensembl:ENST00000314520(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0003723"(RNA binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000571(Zinc finger, CCCH-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR026294|interpro:IPR031644|interpro:IPR036855|interpro:IPR041367|mint:Q13064|entrezgene/locuslink:7681(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431211(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:3sZzqtO8FoR/vVI64iFKb0iuuSc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:8E9WSXM0Q/gy1GONMK86aT6bsP0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P25788 uniprotkb:A0A0S2Z6P0 intact:EBI-348380|ensembl:ENSP00000216455|uniprotkb:Q86U83|uniprotkb:Q8N1D8|uniprotkb:Q9BS70|uniprotkb:B2RCK6 intact:EBI-16429989 psi-mi:psa3_human(display_long)|uniprotkb:PSMA3(gene name)|psi-mi:PSMA3(display_short)|uniprotkb:PSC8(gene name synonym)|uniprotkb:Proteasome component C8(gene name synonym)|uniprotkb:Macropain subunit C8(gene name synonym)|uniprotkb:Multicatalytic endopeptidase complex subunit C8(gene name synonym)|uniprotkb:HC8(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475840 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002779.1|refseq:NP_687033.1|ensembl:ENSG00000100567(gene)|ensembl:ENST00000216455(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005839"(proteasome core complex)|go:"GO:0010499"(proteasomal ubiquitin-independent protein catabolic process)|go:"GO:0045202"(synapse)|go:"GO:0052548"(regulation of endopeptidase activity)|go:"GO:0070062"(extracellular exosome)|go:"GO:0019773"(proteasome core complex, alpha-subunit complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|interpro:IPR000426(Proteasome alpha-subunit, conserved site)|interpro:IPR001353(20S proteasome, A and B subunits)|interpro:IPR023332|interpro:IPR029055|interpro:IPR037555|mint:P25788|rcsb pdb:4R3O|rcsb pdb:4R67|rcsb pdb:5A0Q|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|rcsb pdb:5DSV|rcsb pdb:5GJQ|rcsb pdb:5GJR|rcsb pdb:5L4G|rcsb pdb:5LE5|rcsb pdb:5LEX|rcsb pdb:5LEY|rcsb pdb:5LEZ|rcsb pdb:5LF0|rcsb pdb:5LF1|rcsb pdb:5LF3|rcsb pdb:5LF4|rcsb pdb:5LF6|rcsb pdb:5LF7|rcsb pdb:5LN3|rcsb pdb:5M32|rcsb pdb:5T0C|rcsb pdb:5T0G|rcsb pdb:5T0I|rcsb pdb:5T0J|rcsb pdb:5VFO|rcsb pdb:5VFP|rcsb pdb:5VFQ|rcsb pdb:5VFR|rcsb pdb:5VFS|rcsb pdb:5VFT|rcsb pdb:5VFU|rcsb pdb:6AVO|rcsb pdb:6E5B|rcsb pdb:6KWY|rcsb pdb:6MSB|rcsb pdb:6MSD|rcsb pdb:6MSE|rcsb pdb:6MSG|rcsb pdb:6MSH|rcsb pdb:6MSJ|rcsb pdb:6MSK|rcsb pdb:6R70|rcsb pdb:6REY|rcsb pdb:6RGQ|rcsb pdb:6WJD|rcsb pdb:6WJN|rcsb pdb:6XMJ|rcsb pdb:7AWE|rcsb pdb:7E55|reactome:R-HSA-1169091|reactome:R-HSA-1234176|reactome:R-HSA-1236974|reactome:R-HSA-1236978|rcsb pdb:5T0H|reactome:R-HSA-5668541|reactome:R-HSA-5676590|reactome:R-HSA-5678895|reactome:R-HSA-5687128|reactome:R-HSA-5689603|reactome:R-HSA-174084|reactome:R-HSA-5689880|reactome:R-HSA-68827|reactome:R-HSA-68949|reactome:R-HSA-69017|reactome:R-HSA-69481|reactome:R-HSA-69601|reactome:R-HSA-75815|reactome:R-HSA-8852276|reactome:R-HSA-8854050|reactome:R-HSA-8932339|reactome:R-HSA-8939236|reactome:R-HSA-8939902|reactome:R-HSA-8941858|reactome:R-HSA-8948751|reactome:R-HSA-8951664|reactome:R-HSA-174154|reactome:R-HSA-174178|reactome:R-HSA-174184|reactome:R-HSA-180534|reactome:R-HSA-180585|reactome:R-HSA-187577|reactome:R-HSA-195253|reactome:R-HSA-202424|reactome:R-HSA-211733|reactome:R-HSA-2467813|reactome:R-HSA-2871837|reactome:R-HSA-349425|reactome:R-HSA-350562|reactome:R-HSA-382556|reactome:R-HSA-450408|reactome:R-HSA-4608870|reactome:R-HSA-4641257|reactome:R-HSA-4641258|reactome:R-HSA-5358346|reactome:R-HSA-5362768|reactome:R-HSA-5607761|reactome:R-HSA-5607764|reactome:R-HSA-5610780|reactome:R-HSA-5610783|reactome:R-HSA-5610785|reactome:R-HSA-174113|reactome:R-HSA-5632684|reactome:R-HSA-5658442|reactome:R-HSA-9020702|reactome:R-HSA-9604323|reactome:R-HSA-983168|reactome:R-HSA-9010553|dip:DIP-29366N|entrezgene/locuslink:5684(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16431052(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Er/PY50/GVoCr5yAPXlkfxtP0k9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:hzjmqAWpB+oZzYFunTdyg/Cr8ck true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P25788 uniprotkb:P0C7X2 intact:EBI-348380|ensembl:ENSP00000216455|uniprotkb:Q86U83|uniprotkb:Q8N1D8|uniprotkb:Q9BS70|uniprotkb:B2RCK6 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:psa3_human(display_long)|uniprotkb:PSMA3(gene name)|psi-mi:PSMA3(display_short)|uniprotkb:PSC8(gene name synonym)|uniprotkb:Proteasome component C8(gene name synonym)|uniprotkb:Macropain subunit C8(gene name synonym)|uniprotkb:Multicatalytic endopeptidase complex subunit C8(gene name synonym)|uniprotkb:HC8(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475824 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002779.1|refseq:NP_687033.1|ensembl:ENSG00000100567(gene)|ensembl:ENST00000216455(transcript)|go:"GO:0000502"(proteasome complex)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005839"(proteasome core complex)|go:"GO:0010499"(proteasomal ubiquitin-independent protein catabolic process)|go:"GO:0045202"(synapse)|go:"GO:0052548"(regulation of endopeptidase activity)|go:"GO:0070062"(extracellular exosome)|go:"GO:0019773"(proteasome core complex, alpha-subunit complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|interpro:IPR000426(Proteasome alpha-subunit, conserved site)|interpro:IPR001353(20S proteasome, A and B subunits)|interpro:IPR023332|interpro:IPR029055|interpro:IPR037555|mint:P25788|rcsb pdb:4R3O|rcsb pdb:4R67|rcsb pdb:5A0Q|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|rcsb pdb:5DSV|rcsb pdb:5GJQ|rcsb pdb:5GJR|rcsb pdb:5L4G|rcsb pdb:5LE5|rcsb pdb:5LEX|rcsb pdb:5LEY|rcsb pdb:5LEZ|rcsb pdb:5LF0|rcsb pdb:5LF1|rcsb pdb:5LF3|rcsb pdb:5LF4|rcsb pdb:5LF6|rcsb pdb:5LF7|rcsb pdb:5LN3|rcsb pdb:5M32|rcsb pdb:5T0C|rcsb pdb:5T0G|rcsb pdb:5T0I|rcsb pdb:5T0J|rcsb pdb:5VFO|rcsb pdb:5VFP|rcsb pdb:5VFQ|rcsb pdb:5VFR|rcsb pdb:5VFS|rcsb pdb:5VFT|rcsb pdb:5VFU|rcsb pdb:6AVO|rcsb pdb:6E5B|rcsb pdb:6KWY|rcsb pdb:6MSB|rcsb pdb:6MSD|rcsb pdb:6MSE|rcsb pdb:6MSG|rcsb pdb:6MSH|rcsb pdb:6MSJ|rcsb pdb:6MSK|rcsb pdb:6R70|rcsb pdb:6REY|rcsb pdb:6RGQ|rcsb pdb:6WJD|rcsb pdb:6WJN|rcsb pdb:6XMJ|rcsb pdb:7AWE|rcsb pdb:7E55|reactome:R-HSA-1169091|reactome:R-HSA-1234176|reactome:R-HSA-1236974|reactome:R-HSA-1236978|rcsb pdb:5T0H|reactome:R-HSA-5668541|reactome:R-HSA-5676590|reactome:R-HSA-5678895|reactome:R-HSA-5687128|reactome:R-HSA-5689603|reactome:R-HSA-174084|reactome:R-HSA-5689880|reactome:R-HSA-68827|reactome:R-HSA-68949|reactome:R-HSA-69017|reactome:R-HSA-69481|reactome:R-HSA-69601|reactome:R-HSA-75815|reactome:R-HSA-8852276|reactome:R-HSA-8854050|reactome:R-HSA-8932339|reactome:R-HSA-8939236|reactome:R-HSA-8939902|reactome:R-HSA-8941858|reactome:R-HSA-8948751|reactome:R-HSA-8951664|reactome:R-HSA-174154|reactome:R-HSA-174178|reactome:R-HSA-174184|reactome:R-HSA-180534|reactome:R-HSA-180585|reactome:R-HSA-187577|reactome:R-HSA-195253|reactome:R-HSA-202424|reactome:R-HSA-211733|reactome:R-HSA-2467813|reactome:R-HSA-2871837|reactome:R-HSA-349425|reactome:R-HSA-350562|reactome:R-HSA-382556|reactome:R-HSA-450408|reactome:R-HSA-4608870|reactome:R-HSA-4641257|reactome:R-HSA-4641258|reactome:R-HSA-5358346|reactome:R-HSA-5362768|reactome:R-HSA-5607761|reactome:R-HSA-5607764|reactome:R-HSA-5610780|reactome:R-HSA-5610783|reactome:R-HSA-5610785|reactome:R-HSA-174113|reactome:R-HSA-5632684|reactome:R-HSA-5658442|reactome:R-HSA-9020702|reactome:R-HSA-9604323|reactome:R-HSA-983168|reactome:R-HSA-9010553|dip:DIP-29366N|entrezgene/locuslink:5684(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431052(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Er/PY50/GVoCr5yAPXlkfxtP0k9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:wGdY4FpDC58/zsuuw2uQ5u+NOic true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H2G9 uniprotkb:P0C7X2 intact:EBI-2548012|intact:EBI-28986503|ensembl:ENSP00000327541|ensembl:ENSP00000356782|uniprotkb:O15298|uniprotkb:Q5T531|uniprotkb:Q5T533|uniprotkb:Q9GZX4 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:go45_human(display_long)|uniprotkb:BLZF1(gene name)|psi-mi:BLZF1(display_short)|uniprotkb:JEM1(gene name synonym)|uniprotkb:Basic leucine zipper nuclear factor 1(gene name synonym)|uniprotkb:JEM-1(gene name synonym)|uniprotkb:p45 basic leucine-zipper nuclear factor(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475808 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:XP_011508394.1|ensembl:ENSG00000117475(gene)|ensembl:ENST00000329281(transcript)|ensembl:ENST00000367808(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0007030"(Golgi organization)|go:"GO:0019899"(enzyme binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0043001"(Golgi to plasma membrane protein transport)|interpro:IPR013183(Protein of unknown function DUF1721, fungi)|interpro:IPR027095|mint:Q9H2G9|reactome:R-HSA-162658|refseq:NP_003657.1|ensembl:ENSP00000327541|ensembl:ENST00000367807|ensembl:ENSP00000356781|ensembl:ENSP00000356782|refseq:NP_001307901.1|refseq:NP_001307902.1|entrezgene/locuslink:8548(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16431032(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FqMAghbeSRbqLmtaKELM5JZ+H3s9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:uDGhrqK40w/fBOobCh1W8yjbGXQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P36406 uniprotkb:P0C7X2 intact:EBI-740098|uniprotkb:Q9BZY4|uniprotkb:Q9BZY5|ensembl:ENSP00000231524 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:tri23_human(display_long)|uniprotkb:TRIM23(gene name)|psi-mi:TRIM23(display_short)|uniprotkb:ARD1(gene name synonym)|uniprotkb:ARFD1(gene name synonym)|uniprotkb:RNF46(gene name synonym)|uniprotkb:ADP-ribosylation factor domain-containing protein 1(gene name synonym)|uniprotkb:Tripartite motif-containing protein 23(gene name synonym)|uniprotkb:RING finger protein 46(gene name synonym)|uniprotkb:GTP-binding protein ARD-1(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM23(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475775 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001647.1|refseq:NP_150230.1|refseq:NP_150231.1|refseq:XP_016864933.1|ensembl:ENSG00000113595(gene)|ensembl:ENST00000231524(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0000139"(Golgi membrane)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005765"(lysosomal membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019003"(GDP binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR003649(B-box, C-terminal)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR006689(ARF/SAR superfamily)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR017907|interpro:IPR027417|mint:P36406|rcsb pdb:5VZV|rcsb pdb:5VZW|entrezgene/locuslink:373(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430803(see-also)|intact:EBI-16430813(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:skGAO7nm9YvqJGWF6fzjtn5CWuc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:l+HZW6vSyq/CXOgwcXjw+4B1BQo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13077 uniprotkb:P0C7X2 intact:EBI-359224|uniprotkb:Q658U1|uniprotkb:Q8NF13|uniprotkb:B4DJ77|ensembl:ENSP00000362994|ensembl:ENSP00000443183 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:traf1_human(display_long)|uniprotkb:TRAF1(gene name)|psi-mi:TRAF1(display_short)|uniprotkb:EBI6(gene name synonym)|uniprotkb:Epstein-Barr virus-induced protein 6(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475792 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001177874.1|refseq:NP_001177876.1|refseq:NP_005649.1|dip:DIP-27514N|ensembl:ENSG00000056558(gene)|ensembl:ENST00000373887(transcript)|ensembl:ENST00000540010(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006915"(apoptotic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:2001236"(regulation of extrinsic apoptotic signaling pathway)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR027136|interpro:IPR032070|interpro:IPR037306|interpro:IPR043211|mint:Q13077|rcsb pdb:3M0D|rcsb pdb:5E1T|rcsb pdb:5H10|reactome:R-HSA-5357905|reactome:R-HSA-5357956|entrezgene/locuslink:7185(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430845(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:D51RV1gTNQQjGP978+uv98Hd3Lc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:T0BvUp+TsPvdfaIv3PAgDcArVV4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:A0A0S2Z6P0 - intact:EBI-16429989 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475759 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16430684(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:4wbmY9haTpGLGiF65PdGFILWjhE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16430628 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:"ccsb orf id: 12191"(display_short)|psi-mi:EBI-16430628(display_long) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475743 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:117178(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430684(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:7Bk1mdncQmcEYzJiNq9qdiPiJ6o9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:cITdTpjhYrWVbcYmNy3ApoXa1jc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-10177480 uniprotkb:A0A0S2Z6P0 - intact:EBI-16429989 psi-mi:clone_11897(display_short)|psi-mi:EBI-10177480(display_long)|uniprotkb:Cerebral protein 11(gene name synonym)|uniprotkb:KIAA0481(gene name synonym)|uniprotkb:hucep-11(orf name)|uniprotkb:TMCC2(gene name)|psi-mi:TMCC2(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475727 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:O75069-4(see-also)|intact:EBI-12696212(see-also)|intact:EBI-726731(see-also)|entrezgene/locuslink:9911(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16430492(see-also) no-uniprot-update:|caution:The sequence has been withdrawn from uniprot. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/22 rogid:hIJ1KAUaIyjszZvvmcTXV6Nox8o9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:CGSWlgBvvWrDD/MkcjPa5hdEKCY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-10177480 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:clone_11897(display_short)|psi-mi:EBI-10177480(display_long)|uniprotkb:Cerebral protein 11(gene name synonym)|uniprotkb:KIAA0481(gene name synonym)|uniprotkb:hucep-11(orf name)|uniprotkb:TMCC2(gene name)|psi-mi:TMCC2(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475711 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) uniprotkb:O75069-4(see-also)|intact:EBI-12696212(see-also)|intact:EBI-726731(see-also)|entrezgene/locuslink:9911(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430492(see-also) no-uniprot-update:|caution:The sequence has been withdrawn from uniprot. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2020/06/22 rogid:hIJ1KAUaIyjszZvvmcTXV6Nox8o9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:k9xBdvcTuWhfoCM/f+IqfCtwVSI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99081-3 uniprotkb:A0A0S2Z5X4 intact:EBI-11952764|ensembl:ENSP00000331057|ensembl:ENSP00000388940 intact:EBI-16429014 psi-mi:q99081-3(display_long)|uniprotkb:TCF12(gene name)|psi-mi:TCF12(display_short)|uniprotkb:BHLHB20(gene name synonym)|uniprotkb:Class B basic helix-loop-helix protein 20(gene name synonym)|uniprotkb:DNA-binding protein HTF4(gene name synonym)|uniprotkb:E-box-binding protein(gene name synonym)|uniprotkb:HEB(gene name synonym)|uniprotkb:HTF4(gene name synonym)|uniprotkb:Transcription factor HTF-4(gene name synonym)|uniprotkb:c(isoform synonym) psi-mi:a0a0s2z5x4_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475695 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-722877(isoform-parent)|uniprotkb:Q99081-3(isoform-parent)|ensembl:ENSG00000140262(gene)|ensembl:ENST00000333725(transcript)|ensembl:ENST00000438423(transcript)|entrezgene/locuslink:6938(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|entrezgene/locuslink:146542(identity) intact:EBI-16430405(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Sz84TChPfDPpa01k4znWJvWbQWU9606 rogid:amQX5Qvpa+WepWcjfBDWTIMjx+s9606 rigid:Ah2u0nterhlZNw+r4ahYcydVd1g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99081-3 uniprotkb:P0C7X2 intact:EBI-11952764|ensembl:ENSP00000331057|ensembl:ENSP00000388940 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q99081-3(display_long)|uniprotkb:TCF12(gene name)|psi-mi:TCF12(display_short)|uniprotkb:BHLHB20(gene name synonym)|uniprotkb:Class B basic helix-loop-helix protein 20(gene name synonym)|uniprotkb:DNA-binding protein HTF4(gene name synonym)|uniprotkb:E-box-binding protein(gene name synonym)|uniprotkb:HEB(gene name synonym)|uniprotkb:HTF4(gene name synonym)|uniprotkb:Transcription factor HTF-4(gene name synonym)|uniprotkb:c(isoform synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475679 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-722877(isoform-parent)|uniprotkb:Q99081-3(isoform-parent)|ensembl:ENSG00000140262(gene)|ensembl:ENST00000333725(transcript)|ensembl:ENST00000438423(transcript)|entrezgene/locuslink:6938(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430405(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Sz84TChPfDPpa01k4znWJvWbQWU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:I0iaNPLLKKRTgC5rBx2xBiX/3wA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VWX1 uniprotkb:A0A0S2Z6P0 intact:EBI-742808|uniprotkb:Q8TCZ4|uniprotkb:Q8N4I4|uniprotkb:A8K7M8|ensembl:ENSP00000281156 intact:EBI-16429989 psi-mi:khdr2_human(display_long)|uniprotkb:SLM1(gene name synonym)|uniprotkb:Sam68-like mammalian protein 1(gene name synonym)|uniprotkb:KHDRBS2(gene name)|psi-mi:KHDRBS2(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475663 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_689901.2|ensembl:ENSG00000112232(gene)|ensembl:ENST00000281156(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0017124"(SH3 domain binding)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|reactome:R-HSA-8849468|entrezgene/locuslink:202559(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16430341(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:IfFvZO2dIAo0Sdx+BUb5c8F7aQY9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:hEtwBrRwBgMRdH4hHxnZ03CUt7Q true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5VWX1 uniprotkb:P0C7X2 intact:EBI-742808|uniprotkb:Q8TCZ4|uniprotkb:Q8N4I4|uniprotkb:A8K7M8|ensembl:ENSP00000281156 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:khdr2_human(display_long)|uniprotkb:SLM1(gene name synonym)|uniprotkb:Sam68-like mammalian protein 1(gene name synonym)|uniprotkb:KHDRBS2(gene name)|psi-mi:KHDRBS2(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475647 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_689901.2|ensembl:ENSG00000112232(gene)|ensembl:ENST00000281156(transcript)|go:"GO:0000381"(regulation of alternative mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0017124"(SH3 domain binding)|go:"GO:0042169"(SH2 domain binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR032335|interpro:IPR032571|interpro:IPR036612|reactome:R-HSA-8849468|entrezgene/locuslink:202559(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430341(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:IfFvZO2dIAo0Sdx+BUb5c8F7aQY9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:HOx8CJU2bEk4EvY4N4ZuA2BB5jg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BVG8-5 uniprotkb:A0A0S2Z6P0 intact:EBI-14069005|ensembl:ENSP00000396399|ensembl:ENSP00000454659|ensembl:ENSP00000456239 intact:EBI-16429989 psi-mi:q9bvg8-5(display_long)|uniprotkb:KIFC3(gene name)|psi-mi:KIFC3(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475631 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-2125614(isoform-parent)|uniprotkb:Q9BVG8-5(isoform-parent)|ensembl:ENSG00000140859(gene)|ensembl:ENST00000421376(transcript)|ensembl:ENST00000465878(transcript)|ensembl:ENST00000562903(transcript)|entrezgene/locuslink:3801(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16430207(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:0+/OISIWq43SLdciB0TI/JqsEUo9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:EugJlqVDotRHFcg2W7wEUSpjr5s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BVG8-5 uniprotkb:P0C7X2 intact:EBI-14069005|ensembl:ENSP00000396399|ensembl:ENSP00000454659|ensembl:ENSP00000456239 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q9bvg8-5(display_long)|uniprotkb:KIFC3(gene name)|psi-mi:KIFC3(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475615 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-2125614(isoform-parent)|uniprotkb:Q9BVG8-5(isoform-parent)|ensembl:ENSG00000140859(gene)|ensembl:ENST00000421376(transcript)|ensembl:ENST00000465878(transcript)|ensembl:ENST00000562903(transcript)|entrezgene/locuslink:3801(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430207(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:0+/OISIWq43SLdciB0TI/JqsEUo9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:R00a+plrL+SLBzXjTjNF/pLhTJI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TD10 uniprotkb:A0A0S2Z6P0 intact:EBI-2548751|ensembl:ENSP00000333539|ensembl:ENSP00000379589|ensembl:ENSP00000444254|ensembl:ENSP00000506738|uniprotkb:Q7Z3J0|uniprotkb:Q8IV14|uniprotkb:D3DSA4 intact:EBI-16429989 psi-mi:mipo1_human(display_long)|uniprotkb:MIPOL1(gene name)|psi-mi:MIPOL1(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475596 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000151338(gene)|ensembl:ENST00000327441(transcript)|ensembl:ENST00000396294(transcript)|ensembl:ENST00000537471(transcript)|ensembl:ENST00000684589(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0042802"(identical protein binding)|interpro:IPR026175|mint:Q8TD10|refseq:NP_001182225.1|refseq:NP_001182226.1|refseq:NP_620059.1|refseq:XP_016876492.1|refseq:XP_016876493.1|refseq:XP_016876494.1|entrezgene/locuslink:145282(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16430097(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:X4gY7nzDtnrS2yil7QhmLH968Ug9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:XVnx74tl2VYyKZ4yPL1knPdITfU true sufficient binding region:182-442 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8TD10 uniprotkb:P0C7X2 intact:EBI-2548751|ensembl:ENSP00000333539|ensembl:ENSP00000379589|ensembl:ENSP00000444254|ensembl:ENSP00000506738|uniprotkb:Q7Z3J0|uniprotkb:Q8IV14|uniprotkb:D3DSA4 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:mipo1_human(display_long)|uniprotkb:MIPOL1(gene name)|psi-mi:MIPOL1(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475577 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000151338(gene)|ensembl:ENST00000327441(transcript)|ensembl:ENST00000396294(transcript)|ensembl:ENST00000537471(transcript)|ensembl:ENST00000684589(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0042802"(identical protein binding)|interpro:IPR026175|mint:Q8TD10|refseq:NP_001182225.1|refseq:NP_001182226.1|refseq:NP_620059.1|refseq:XP_016876492.1|refseq:XP_016876493.1|refseq:XP_016876494.1|entrezgene/locuslink:145282(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16430097(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:X4gY7nzDtnrS2yil7QhmLH968Ug9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:Xb4tmt4nlMWTvdG8dalXJU7xY3o true sufficient binding region:182-442 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P14373 uniprotkb:P0C7X2 intact:EBI-719493|uniprotkb:A2BE15|uniprotkb:Q5RJA8|uniprotkb:Q5ST26|uniprotkb:Q6LA73|uniprotkb:Q6NXR9|uniprotkb:Q9BZY6|uniprotkb:Q9UJL3|ensembl:ENSP00000383555|ensembl:ENSP00000392787|ensembl:ENSP00000405229|ensembl:ENSP00000414793|ensembl:ENSP00000366404 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:tri27_human(display_long)|uniprotkb:TRIM27(gene name)|psi-mi:TRIM27(display_short)|uniprotkb:RNF76(gene name synonym)|uniprotkb:RFP(gene name synonym)|uniprotkb:Ret finger protein(gene name synonym)|uniprotkb:Tripartite motif-containing protein 27(gene name synonym)|uniprotkb:RING finger protein 76(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRIM27(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16475560 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006501.1|go:"GO:0046596"(regulation of viral entry into host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0090281"(negative regulation of calcium ion import)|interpro:IPR000315(Zinc finger, B-box)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR001870("B302 (SPRY)-like")|interpro:IPR003877(SPla/RYanodine receptor SPRY)|interpro:IPR003879(Butyrophylin-like)|interpro:IPR006574(SPRY-associated)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR013320(Concanavalin A-like lectin/glucanase, subgroup)|interpro:IPR017907|interpro:IPR020457|interpro:IPR035791|interpro:IPR043136|mint:P14373|reactome:R-HSA-3232142|reactome:R-HSA-9635465|reactome:R-HSA-8948751|ensembl:ENSG00000204713(gene)|ensembl:ENSG00000215641(gene)|ensembl:ENSG00000229006(gene)|ensembl:ENSG00000234495(gene)|ensembl:ENSG00000237071(gene)|ensembl:ENST00000377199(transcript)|ensembl:ENST00000400720(transcript)|ensembl:ENST00000431123(transcript)|ensembl:ENST00000435528(transcript)|ensembl:ENST00000437160(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0001650"(fibrillar center)|go:"GO:0002820"(negative regulation of adaptive immune response)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0003677"(DNA binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005768"(endosome)|go:"GO:0005769"(early endosome)|go:"GO:0005829"(cytosol)|go:"GO:0006469"(negative regulation of protein kinase activity)|go:"GO:0007283"(spermatogenesis)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010508"(positive regulation of autophagy)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0016605"(PML body)|go:"GO:0019789"(SUMO transferase activity)|go:"GO:0019901"(protein kinase binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032703"(negative regulation of interleukin-2 production)|go:"GO:0032720"(negative regulation of tumor necrosis factor production)|go:"GO:0032729"(positive regulation of interferon-gamma production)|go:"GO:0032880"(regulation of protein localization)|go:"GO:0032897"(negative regulation of viral transcription)|go:"GO:0034314"(Arp2/3 complex-mediated actin nucleation)|go:"GO:0042147"(retrograde transport, endosome to Golgi)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045087"(innate immune response)|go:"GO:0045814"(negative regulation of gene expression, epigenetic)|entrezgene/locuslink:5987(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16429991(see-also)|intact:EBI-16430001(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dsfH5OUghD8KSaTz1SFw9OYVTK49606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:zt+Cd+Sd/TKTSyCodArGTl6Zato true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8NA61-2 uniprotkb:P0C7X2 intact:EBI-11524851|ensembl:ENSP00000368249|ensembl:ENSP00000480148 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q8na61-2(display_long)|uniprotkb:CBY2(gene name)|psi-mi:CBY2(display_short)|uniprotkb:SPERT(gene name synonym)|uniprotkb:Spermatid-associated protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476054 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-741724(isoform-parent)|ensembl:ENSG00000174015(gene)|ensembl:ENST00000378966(transcript)|ensembl:ENST00000610924(transcript)|uniprotkb:Q8NA61-2(isoform-parent)|entrezgene/locuslink:220082(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432394(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:SogYcXGGMYRYzB9xKC5o0pEtsDs9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:LkFVSjeY6uLv/OYA04FCAWk0Zr8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q5TD97 uniprotkb:P0C7X2 intact:EBI-750641|uniprotkb:Q5TD98|uniprotkb:Q8WW21|uniprotkb:Q9NQU2|uniprotkb:B2RBD1|uniprotkb:E1P526|ensembl:ENSP00000326022|ensembl:ENSP00000396390|ensembl:ENSP00000442357 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:fhl5_human(display_long)|uniprotkb:Activator of cAMP-responsive element modulator in testis(gene name synonym)|uniprotkb:FHL5(gene name)|psi-mi:FHL5(display_short)|uniprotkb:ACT(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476118 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001164278.1|refseq:NP_065228.4|refseq:NP_001309395.1|refseq:NP_001309396.1|ensembl:ENSG00000112214(gene)|ensembl:ENST00000326771(transcript)|ensembl:ENST00000450218(transcript)|ensembl:ENST00000541107(transcript)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0030018"(Z disc)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001781(Zinc finger, LIM-type)|interpro:IPR037987|interpro:IPR042947|mint:Q5TD97|rcsb pdb:1X68|entrezgene/locuslink:9457(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432476(see-also)|intact:EBI-16432486(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:AYHIHh+ibS4sNYAZY4ghojZOJOI9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:ZTNcIGu+3T43kPeJASd6dLO18Lw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C0F1 uniprotkb:A0A0S2Z6P0 intact:EBI-744115|uniprotkb:A8K8W9|uniprotkb:B3KT53|uniprotkb:Q8IXZ4|uniprotkb:A8MW11|uniprotkb:D3DP42|ensembl:ENSP00000296519|ensembl:ENSP00000380009|ensembl:ENSP00000423153 intact:EBI-16429989 psi-mi:cep44_human(display_long)|uniprotkb:HBV PreS1-transactivated protein 3(gene name synonym)|uniprotkb:CEP44(gene name)|psi-mi:CEP44(display_short)|uniprotkb:KIAA1712(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476102 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035247.1|refseq:NP_001138786.1|refseq:XP_011530587.1|refseq:XP_011530588.1|refseq:XP_011530589.1|refseq:XP_016864143.1|refseq:XP_016864144.1|ensembl:ENSG00000164118(gene)|ensembl:ENST00000296519(transcript)|ensembl:ENST00000396791(transcript)|ensembl:ENST00000503780(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007099"(centriole replication)|go:"GO:0008017"(microtubule binding)|go:"GO:0010457"(centriole-centriole cohesion)|go:"GO:0030496"(midbody)|interpro:IPR029157|interpro:IPR033603|mint:Q9C0F1|entrezgene/locuslink:80817(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432446(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gDTC64oDhudGdsssC7v+suIHZkA9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:YWssy0Jqv+6UHsgD7n4hELdDUBg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9C0F1 uniprotkb:P0C7X2 intact:EBI-744115|uniprotkb:A8K8W9|uniprotkb:B3KT53|uniprotkb:Q8IXZ4|uniprotkb:A8MW11|uniprotkb:D3DP42|ensembl:ENSP00000296519|ensembl:ENSP00000380009|ensembl:ENSP00000423153 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:cep44_human(display_long)|uniprotkb:HBV PreS1-transactivated protein 3(gene name synonym)|uniprotkb:CEP44(gene name)|psi-mi:CEP44(display_short)|uniprotkb:KIAA1712(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476086 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001035247.1|refseq:NP_001138786.1|refseq:XP_011530587.1|refseq:XP_011530588.1|refseq:XP_011530589.1|refseq:XP_016864143.1|refseq:XP_016864144.1|ensembl:ENSG00000164118(gene)|ensembl:ENST00000296519(transcript)|ensembl:ENST00000396791(transcript)|ensembl:ENST00000503780(transcript)|go:"GO:0000922"(spindle pole)|go:"GO:0005737"(cytoplasm)|go:"GO:0005813"(centrosome)|go:"GO:0005814"(centriole)|go:"GO:0007098"(centrosome cycle)|go:"GO:0007099"(centriole replication)|go:"GO:0008017"(microtubule binding)|go:"GO:0010457"(centriole-centriole cohesion)|go:"GO:0030496"(midbody)|interpro:IPR029157|interpro:IPR033603|mint:Q9C0F1|entrezgene/locuslink:80817(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432446(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:gDTC64oDhudGdsssC7v+suIHZkA9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:KTK4s8ioGirDukR27WnKAkc5urs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BUZ4 uniprotkb:P0C7X2 intact:EBI-3650647|uniprotkb:O75615|uniprotkb:Q14848|uniprotkb:Q2KJU4|uniprotkb:Q2PJN8|ensembl:ENSP00000262395 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:traf4_human(display_long)|uniprotkb:TRAF4(gene name)|psi-mi:TRAF4(display_short)|uniprotkb:CART1(gene name synonym)|uniprotkb:MLN62(gene name synonym)|uniprotkb:RNF83(gene name synonym)|uniprotkb:Cysteine-rich domain associated with RING and Traf domains protein 1(gene name synonym)|uniprotkb:Metastatic lymph node gene 62 protein(gene name synonym)|uniprotkb:RING finger protein 83(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476355 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004286.2|dip:DIP-40910N|ensembl:ENSG00000076604(gene)|ensembl:ENST00000262395(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006915"(apoptotic process)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0007585"(respiratory gaseous exchange by respiratory system)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030323"(respiratory tube development)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050699"(WW domain binding)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027138|interpro:IPR037307|interpro:IPR043211|mint:Q9BUZ4|rcsb pdb:2EOD|rcsb pdb:2YUC|rcsb pdb:3ZJB|rcsb pdb:4K8U|rcsb pdb:4M4E|rcsb pdb:5YC1|entrezgene/locuslink:9618(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433576(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Bjl/NCcleyKgZb7suHw3AVWpG09606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:b3tDKzmIWmhnNFRD+K5pnYIOFmw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00308 uniprotkb:A0A0S2Z6P0 intact:EBI-743923|uniprotkb:H3BRF3|uniprotkb:Q6ZTQ5|uniprotkb:A6NEP1|uniprotkb:Q96CZ2|uniprotkb:Q9BWN6|uniprotkb:B2R706|uniprotkb:B4DTL5|uniprotkb:F5H213|uniprotkb:I3RSG8|ensembl:ENSP00000352069 intact:EBI-16429989 psi-mi:wwp2_human(display_long)|uniprotkb:WW domain-containing protein 2(gene name synonym)|uniprotkb:Atrophin-1-interacting protein 2(gene name synonym)|uniprotkb:WWP2(gene name)|psi-mi:WWP2(display_short)|uniprotkb:HECT-type E3 ubiquitin transferase WWP2(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476339 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_008945.2|refseq:NP_001257383.1|refseq:NP_001257384.1|refseq:XP_011521125.1|refseq:XP_011521127.1|refseq:XP_011521128.1|refseq:NP_001257382.1|refseq:NP_955456.1|refseq:XP_016878368.1|refseq:XP_016878369.1|refseq:XP_016878370.1|ensembl:ENSG00000198373(gene)|ensembl:ENST00000359154(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006858"(extracellular transport)|go:"GO:0008134"(transcription factor binding)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0032410"(negative regulation of transporter activity)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0042391"(regulation of membrane potential)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0051224"(negative regulation of protein transport)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:1901016"(regulation of potassium ion transmembrane transporter activity)|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR000569(HECT)|interpro:IPR001202(WW/Rsp5/WWP)|interpro:IPR024928|interpro:IPR035892|interpro:IPR035983|interpro:IPR036020|mint:O00308|rcsb pdb:4Y07|rcsb pdb:5TJ7|rcsb pdb:5TJ8|rcsb pdb:5TJQ|rcsb pdb:6J1Z|rcsb pdb:6RSS|reactome:R-HSA-8948751|reactome:R-HSA-9013406|reactome:R-HSA-9013409|reactome:R-HSA-9013420|reactome:R-HSA-9013507|entrezgene/locuslink:11060(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16433496(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xj0Xssn75HP9sp/tHNe4n83eHPE9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:jRoX2n7Mbh2ndU1Pa9Reeg1h34k true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O00308 uniprotkb:P0C7X2 intact:EBI-743923|uniprotkb:H3BRF3|uniprotkb:Q6ZTQ5|uniprotkb:A6NEP1|uniprotkb:Q96CZ2|uniprotkb:Q9BWN6|uniprotkb:B2R706|uniprotkb:B4DTL5|uniprotkb:F5H213|uniprotkb:I3RSG8|ensembl:ENSP00000352069 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:wwp2_human(display_long)|uniprotkb:WW domain-containing protein 2(gene name synonym)|uniprotkb:Atrophin-1-interacting protein 2(gene name synonym)|uniprotkb:WWP2(gene name)|psi-mi:WWP2(display_short)|uniprotkb:HECT-type E3 ubiquitin transferase WWP2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476323 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_008945.2|refseq:NP_001257383.1|refseq:NP_001257384.1|refseq:XP_011521125.1|refseq:XP_011521127.1|refseq:XP_011521128.1|refseq:NP_001257382.1|refseq:NP_955456.1|refseq:XP_016878368.1|refseq:XP_016878369.1|refseq:XP_016878370.1|ensembl:ENSG00000198373(gene)|ensembl:ENST00000359154(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0006858"(extracellular transport)|go:"GO:0008134"(transcription factor binding)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0032410"(negative regulation of transporter activity)|go:"GO:0034765"(regulation of ion transmembrane transport)|go:"GO:0042391"(regulation of membrane potential)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0045732"(positive regulation of protein catabolic process)|go:"GO:0045746"(negative regulation of Notch signaling pathway)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0051224"(negative regulation of protein transport)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0070062"(extracellular exosome)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:1901016"(regulation of potassium ion transmembrane transporter activity)|interpro:IPR000008(C2 calcium-dependent membrane targeting)|interpro:IPR000569(HECT)|interpro:IPR001202(WW/Rsp5/WWP)|interpro:IPR024928|interpro:IPR035892|interpro:IPR035983|interpro:IPR036020|mint:O00308|rcsb pdb:4Y07|rcsb pdb:5TJ7|rcsb pdb:5TJ8|rcsb pdb:5TJQ|rcsb pdb:6J1Z|rcsb pdb:6RSS|reactome:R-HSA-8948751|reactome:R-HSA-9013406|reactome:R-HSA-9013409|reactome:R-HSA-9013420|reactome:R-HSA-9013507|entrezgene/locuslink:11060(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433496(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xj0Xssn75HP9sp/tHNe4n83eHPE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:5CCISQbZQ//OlFza0wPMKo39X8A true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:A0A0S2Z5X4 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-16429014 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:a0a0s2z5x4_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476307 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|entrezgene/locuslink:146542(identity) intact:EBI-16433373(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:amQX5Qvpa+WepWcjfBDWTIMjx+s9606 rigid:QPWtG8mtDAMb8UTb+KXt33b2zis true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43186 uniprotkb:P0C7X2 intact:EBI-748171|uniprotkb:Q0QD45|ensembl:ENSP00000221996|ensembl:ENSP00000445565 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:crx_human(display_long)|uniprotkb:CRX(gene name)|psi-mi:CRX(display_short)|uniprotkb:CORD2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476291 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000545.1|ensembl:ENSG00000105392(gene)|ensembl:ENST00000221996(transcript)|ensembl:ENST00000539067(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001216"(DNA-binding transcription activator activity)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0007399"(nervous system development)|go:"GO:0007601"(visual perception)|go:"GO:0009887"(animal organ morphogenesis)|go:"GO:0016922"(nuclear receptor binding)|go:"GO:0030154"(cell differentiation)|go:"GO:0043522"(leucine zipper domain binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050896"(response to stimulus)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0090575"(RNA polymerase II transcription regulator complex)|go:"GO:1990837"(sequence-specific double-stranded DNA binding)|interpro:IPR001356(Homeobox)|interpro:IPR009057(Homeodomain-like)|interpro:IPR013851(Transcription factor Otx, C-terminal)|interpro:IPR017970|entrezgene/locuslink:1406(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433373(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:v/bkO/0iLzq1Q2HtieWQQ40RF9M9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:A1ZgkSRFNjr4bIgAqc9yX3nYKHU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O43586 uniprotkb:P0C7X2 intact:EBI-1050964|uniprotkb:O43585|uniprotkb:O95657|uniprotkb:B5BUK4|uniprotkb:B5BU74|ensembl:ENSP00000452746 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:ppip1_human(display_long)|uniprotkb:CD2-binding protein 1(gene name synonym)|uniprotkb:H-PIP(gene name synonym)|uniprotkb:PSTPIP1(gene name)|psi-mi:PSTPIP1(display_short)|uniprotkb:CD2BP1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003969.2|refseq:NP_001308064.1|refseq:NP_001308066.1|ensembl:ENSG00000140368(gene)|ensembl:ENST00000558012(transcript)|go:"GO:0001931"(uropod)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005884"(actin filament)|go:"GO:0005886"(plasma membrane)|go:"GO:0006897"(endocytosis)|go:"GO:0006954"(inflammatory response)|go:"GO:0007155"(cell adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0016020"(membrane)|go:"GO:0030027"(lamellipodium)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0032154"(cleavage furrow)|go:"GO:0042802"(identical protein binding)|go:"GO:0045087"(innate immune response)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0051015"(actin filament binding)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR001452(Src homology-3)|interpro:IPR027267|interpro:IPR030777|interpro:IPR031160|interpro:IPR036028|mint:O43586|rcsb pdb:2DIL|reactome:R-HSA-844456|reactome:R-HSA-9660826|entrezgene/locuslink:9051(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433167(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JWK4dCYdcVF6mKwe+hoOri1wwps9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:hK/IxWTd2IWCIiNHCyJWHHTSOE8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:A0A0S2Z6P0 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-16429989 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16433137(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:Ow8Wv+fHTFOxrjD/XHDj66D+v6g true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q13137 uniprotkb:P0C7X2 intact:EBI-739580|uniprotkb:B4DDC4|uniprotkb:E7ENK0|uniprotkb:Q53FQ5|uniprotkb:Q53HB5|uniprotkb:Q6IBN9|uniprotkb:Q9BTF7|uniprotkb:B2RBT0|ensembl:ENSP00000258947|uniprotkb:B4E0C0|uniprotkb:E7ETP5|uniprotkb:B4DDT4|uniprotkb:B4DP36|uniprotkb:E9PBE5 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:caco2_human(display_long)|uniprotkb:CALCOCO2(gene name)|psi-mi:CALCOCO2(display_short)|uniprotkb:NDP52(gene name synonym)|uniprotkb:Nuclear domain 10 protein NDP52(gene name synonym)|uniprotkb:Antigen nuclear dot 52 kDa protein(gene name synonym)|uniprotkb:Nuclear dot protein 52(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476243 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001248319.1|refseq:NP_001248320.1|refseq:NP_001248322.1|refseq:NP_005822.1|ensembl:ENSG00000136436(gene)|ensembl:ENST00000258947(transcript)|go:"GO:0000421"(autophagosome membrane)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005776"(autophagosome)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0016020"(membrane)|go:"GO:0016032"(viral process)|go:"GO:0016605"(PML body)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0034341"(response to interferon-gamma)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043231"(intracellular membrane-bounded organelle)|go:"GO:0046872"(metal ion binding)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0098792"(xenophagy)|go:"GO:1901098"(positive regulation of autophagosome maturation)|interpro:IPR041611|interpro:IPR041641|mint:Q13137|rcsb pdb:2MXP|rcsb pdb:3VVV|rcsb pdb:3VVW|rcsb pdb:4GXL|rcsb pdb:4HAN|rcsb pdb:4XKL|rcsb pdb:5AAQ|rcsb pdb:5Z7A|rcsb pdb:5Z7L|refseq:NP_001248324.1|dip:DIP-57534N|entrezgene/locuslink:10241(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433137(see-also) crc64:609B121DA1A9DCB8 - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N/GPJUGBK+Dh5Cg+csmafphuo9M9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:MAw+gpA0lm9atJBEEimpyKG5qy0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96KQ7 uniprotkb:A0A0S2Z6P0 intact:EBI-744366|uniprotkb:B0UZY2|uniprotkb:Q14349|uniprotkb:Q6PK06|uniprotkb:Q96MH5|uniprotkb:Q96QD0|uniprotkb:Q9UQL8|uniprotkb:Q9Y331|uniprotkb:Q5JQ92|uniprotkb:Q5JP83|uniprotkb:Q5JQA1|uniprotkb:Q5JQG3|ensembl:ENSP00000364687|ensembl:ENSP00000372864|ensembl:ENSP00000392305|ensembl:ENSP00000396119|ensembl:ENSP00000406110|ensembl:ENSP00000416957 intact:EBI-16429989 psi-mi:ehmt2_human(display_long)|uniprotkb:KMT1C(gene name synonym)|uniprotkb:Histone H3-K9 methyltransferase 3(gene name synonym)|uniprotkb:Euchromatic histone-lysine N-methyltransferase 2(gene name synonym)|uniprotkb:HLA-B-associated transcript 8(gene name synonym)|uniprotkb:Protein G9a(gene name synonym)|uniprotkb:Lysine N-methyltransferase 1C(gene name synonym)|uniprotkb:EHMT2(gene name)|psi-mi:EHMT2(display_short)|uniprotkb:BAT8(gene name synonym)|uniprotkb:G9A(gene name synonym)|uniprotkb:NG36(gene name synonym)|uniprotkb:C6orf30(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476224 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006700.3|refseq:NP_079532.5|interpro:IPR043550|mint:Q96KQ7|rcsb pdb:2O8J|rcsb pdb:3DM1|rcsb pdb:3K5K|rcsb pdb:3RJW|rcsb pdb:4NVQ|rcsb pdb:5JHN|rcsb pdb:5JIN|rcsb pdb:5JIY|rcsb pdb:5JJ0|rcsb pdb:5T0K|rcsb pdb:5T0M|rcsb pdb:5TTF|rcsb pdb:5TUY|rcsb pdb:5V9I|rcsb pdb:5VSC|rcsb pdb:5VSE|rcsb pdb:6MM1|rcsb pdb:7BTV|rcsb pdb:7BUC|rcsb pdb:7DCF|reactome:R-HSA-2559582|reactome:R-HSA-3214841|reactome:R-HSA-427389|reactome:R-HSA-6804760|reactome:R-HSA-73762|reactome:R-HSA-8853884|reactome:R-HSA-8953750|ensembl:ENSG00000204371(gene)|ensembl:ENSG00000206376(gene)|ensembl:ENSG00000227333(gene)|ensembl:ENSG00000232045(gene)|go:"GO:0010424"(DNA methylation on cytosine within a CG sequence)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0016571"(histone methylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0018024"(histone-lysine N-methyltransferase activity)|go:"GO:0018027"(peptidyl-lysine dimethylation)|go:"GO:0034968"(histone lysine methylation)|go:"GO:0035265"(organ growth)|go:"GO:0035690"|go:"GO:0036166"(phenotypic switching)|go:"GO:0044030"(regulation of DNA methylation)|go:"GO:0045471"(response to ethanol)|ensembl:ENSG00000236759(gene)|ensembl:ENSG00000238134(gene)|ensembl:ENST00000375537(transcript)|ensembl:ENST00000383373(transcript)|ensembl:ENST00000420336(transcript)|ensembl:ENST00000421926(transcript)|ensembl:ENST00000429506(transcript)|ensembl:ENST00000450075(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0002039"(p53 binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006275"(regulation of DNA replication)|go:"GO:0006306"(DNA methylation)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007286"(spermatid development)|go:"GO:0007616"(long-term memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0009566"(fertilization)|go:"GO:0046974"("histone methyltransferase activity (H3-K9 specific)")|go:"GO:0046976"("histone methyltransferase activity (H3-K27 specific)")|go:"GO:0048148"(behavioral response to cocaine)|go:"GO:0048665"(neuron fate specification)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0051570"(regulation of histone H3-K9 methylation)|go:"GO:0060992"(response to fungicide)|go:"GO:0070742"(C2H2 zinc finger domain binding)|go:"GO:0071314"(cellular response to cocaine)|go:"GO:1902902"(negative regulation of autophagosome assembly)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR001214(SET)|interpro:IPR002110(Ankyrin)|interpro:IPR007728(Pre-SET zinc-binding region)|interpro:IPR020683|interpro:IPR036770|interpro:IPR038034|refseq:NP_001305762.1|refseq:NP_001276342.1|dip:DIP-34461N|entrezgene/locuslink:10919(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432973(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dblr0h0KBVa6kvaDHhnynRuHE6E9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:InmNGe5ecE4/MzcxWZdtX8Kk5BQ true sufficient binding region:210-1210 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96KQ7 uniprotkb:P0C7X2 intact:EBI-744366|uniprotkb:B0UZY2|uniprotkb:Q14349|uniprotkb:Q6PK06|uniprotkb:Q96MH5|uniprotkb:Q96QD0|uniprotkb:Q9UQL8|uniprotkb:Q9Y331|uniprotkb:Q5JQ92|uniprotkb:Q5JP83|uniprotkb:Q5JQA1|uniprotkb:Q5JQG3|ensembl:ENSP00000364687|ensembl:ENSP00000372864|ensembl:ENSP00000392305|ensembl:ENSP00000396119|ensembl:ENSP00000406110|ensembl:ENSP00000416957 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:ehmt2_human(display_long)|uniprotkb:KMT1C(gene name synonym)|uniprotkb:Histone H3-K9 methyltransferase 3(gene name synonym)|uniprotkb:Euchromatic histone-lysine N-methyltransferase 2(gene name synonym)|uniprotkb:HLA-B-associated transcript 8(gene name synonym)|uniprotkb:Protein G9a(gene name synonym)|uniprotkb:Lysine N-methyltransferase 1C(gene name synonym)|uniprotkb:EHMT2(gene name)|psi-mi:EHMT2(display_short)|uniprotkb:BAT8(gene name synonym)|uniprotkb:G9A(gene name synonym)|uniprotkb:NG36(gene name synonym)|uniprotkb:C6orf30(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476205 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006700.3|refseq:NP_079532.5|interpro:IPR043550|mint:Q96KQ7|rcsb pdb:2O8J|rcsb pdb:3DM1|rcsb pdb:3K5K|rcsb pdb:3RJW|rcsb pdb:4NVQ|rcsb pdb:5JHN|rcsb pdb:5JIN|rcsb pdb:5JIY|rcsb pdb:5JJ0|rcsb pdb:5T0K|rcsb pdb:5T0M|rcsb pdb:5TTF|rcsb pdb:5TUY|rcsb pdb:5V9I|rcsb pdb:5VSC|rcsb pdb:5VSE|rcsb pdb:6MM1|rcsb pdb:7BTV|rcsb pdb:7BUC|rcsb pdb:7DCF|reactome:R-HSA-2559582|reactome:R-HSA-3214841|reactome:R-HSA-427389|reactome:R-HSA-6804760|reactome:R-HSA-73762|reactome:R-HSA-8853884|reactome:R-HSA-8953750|ensembl:ENSG00000204371(gene)|ensembl:ENSG00000206376(gene)|ensembl:ENSG00000227333(gene)|ensembl:ENSG00000232045(gene)|go:"GO:0010424"(DNA methylation on cytosine within a CG sequence)|go:"GO:0016279"(protein-lysine N-methyltransferase activity)|go:"GO:0016571"(histone methylation)|go:"GO:0016607"(nuclear speck)|go:"GO:0018024"(histone-lysine N-methyltransferase activity)|go:"GO:0018027"(peptidyl-lysine dimethylation)|go:"GO:0034968"(histone lysine methylation)|go:"GO:0035265"(organ growth)|go:"GO:0035690"|go:"GO:0036166"(phenotypic switching)|go:"GO:0044030"(regulation of DNA methylation)|go:"GO:0045471"(response to ethanol)|ensembl:ENSG00000236759(gene)|ensembl:ENSG00000238134(gene)|ensembl:ENST00000375537(transcript)|ensembl:ENST00000383373(transcript)|ensembl:ENST00000420336(transcript)|ensembl:ENST00000421926(transcript)|ensembl:ENST00000429506(transcript)|ensembl:ENST00000450075(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000785"(chromatin)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0001222"(transcription corepressor binding)|go:"GO:0002039"(p53 binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006275"(regulation of DNA replication)|go:"GO:0006306"(DNA methylation)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007286"(spermatid development)|go:"GO:0007616"(long-term memory)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009267"(cellular response to starvation)|go:"GO:0009566"(fertilization)|go:"GO:0046974"("histone methyltransferase activity (H3-K9 specific)")|go:"GO:0046976"("histone methyltransferase activity (H3-K27 specific)")|go:"GO:0048148"(behavioral response to cocaine)|go:"GO:0048665"(neuron fate specification)|go:"GO:0051569"(regulation of histone H3-K4 methylation)|go:"GO:0051570"(regulation of histone H3-K9 methylation)|go:"GO:0060992"(response to fungicide)|go:"GO:0070742"(C2H2 zinc finger domain binding)|go:"GO:0071314"(cellular response to cocaine)|go:"GO:1902902"(negative regulation of autophagosome assembly)|go:"GO:1990841"(promoter-specific chromatin binding)|interpro:IPR001214(SET)|interpro:IPR002110(Ankyrin)|interpro:IPR007728(Pre-SET zinc-binding region)|interpro:IPR020683|interpro:IPR036770|interpro:IPR038034|refseq:NP_001305762.1|refseq:NP_001276342.1|dip:DIP-34461N|entrezgene/locuslink:10919(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432973(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:dblr0h0KBVa6kvaDHhnynRuHE6E9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:3jPCjDToxPCKN6oju6XA5RLLuxw true sufficient binding region:210-1210 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IYA8 uniprotkb:A0A0S2Z6P0 intact:EBI-8638439|intact:EBI-28969497|ensembl:ENSP00000296449|ensembl:ENSP00000391788|ensembl:ENSP00000407837|uniprotkb:C9JJL0|uniprotkb:Q96LP7|intact:MINT-8162095|uniprotkb:Q05DG9 intact:EBI-16429989 psi-mi:iho1_human(display_long)|uniprotkb:IHO1(gene name)|psi-mi:IHO1(display_short)|uniprotkb:CCDC36(gene name synonym)|uniprotkb:Cancer/testis antigen 74(gene name synonym)|uniprotkb:Coiled-coil domain-containing protein 36(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476186 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSP00000296449|ensembl:ENST00000366429|ensembl:ENSP00000403700|ensembl:ENSP00000391788|ensembl:ENSP00000407837|ensembl:ENSG00000173421(gene)|ensembl:ENST00000296449(transcript)|ensembl:ENST00000438782(transcript)|ensembl:ENST00000452691(transcript)|go:"GO:0000794"(condensed nuclear chromosome)|go:"GO:0006310"(DNA recombination)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0007283"(spermatogenesis)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0048477"(oogenesis)|go:"GO:0060629"(regulation of homologous chromosome segregation)|interpro:IPR031529|mint:Q8IYA8|refseq:XP_011531974.1|refseq:XP_011531975.1|refseq:NP_001128669.1|refseq:NP_835467.2|refseq:XP_006713187.1|entrezgene/locuslink:339834(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432832(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TNQLExkhmC1NWqsE240Cx7zFVU9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:YKrZRPvBQPtzKXBx/HaiFIknZ2U true sufficient binding region:11-594 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8IYA8 uniprotkb:P0C7X2 intact:EBI-8638439|intact:EBI-28969497|ensembl:ENSP00000296449|ensembl:ENSP00000391788|ensembl:ENSP00000407837|uniprotkb:C9JJL0|uniprotkb:Q96LP7|intact:MINT-8162095|uniprotkb:Q05DG9 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:iho1_human(display_long)|uniprotkb:IHO1(gene name)|psi-mi:IHO1(display_short)|uniprotkb:CCDC36(gene name synonym)|uniprotkb:Cancer/testis antigen 74(gene name synonym)|uniprotkb:Coiled-coil domain-containing protein 36(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476167 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSP00000296449|ensembl:ENST00000366429|ensembl:ENSP00000403700|ensembl:ENSP00000391788|ensembl:ENSP00000407837|ensembl:ENSG00000173421(gene)|ensembl:ENST00000296449(transcript)|ensembl:ENST00000438782(transcript)|ensembl:ENST00000452691(transcript)|go:"GO:0000794"(condensed nuclear chromosome)|go:"GO:0006310"(DNA recombination)|go:"GO:0007129"(homologous chromosome pairing at meiosis)|go:"GO:0007283"(spermatogenesis)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0048477"(oogenesis)|go:"GO:0060629"(regulation of homologous chromosome segregation)|interpro:IPR031529|mint:Q8IYA8|refseq:XP_011531974.1|refseq:XP_011531975.1|refseq:NP_001128669.1|refseq:NP_835467.2|refseq:XP_006713187.1|entrezgene/locuslink:339834(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432832(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TNQLExkhmC1NWqsE240Cx7zFVU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:q/LHZYbjm8Nk2ZKixm3WNRbW13c true sufficient binding region:11-594 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8HWS3 uniprotkb:A0A0S2Z6P0 intact:EBI-746118|uniprotkb:Q5T6B3|ensembl:ENSP00000332208 intact:EBI-16429989 psi-mi:rfx6_human(display_long)|uniprotkb:RFX6(gene name)|psi-mi:RFX6(display_short)|uniprotkb:RFXDC1(gene name synonym)|uniprotkb:Regulatory factor X 6(gene name synonym)|uniprotkb:Regulatory factor X domain-containing protein 1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476151 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775831.2|ensembl:ENSG00000185002(gene)|ensembl:ENST00000332958(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003309"(type B pancreatic cell differentiation)|go:"GO:0003310"(pancreatic A cell differentiation)|go:"GO:0003311"(pancreatic D cell differentiation)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0031018"(endocrine pancreas development)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050796"(regulation of insulin secretion)|go:"GO:0090104"(pancreatic epsilon cell differentiation)|interpro:IPR003150(DNA-binding RFX)|interpro:IPR036388|interpro:IPR036390|interpro:IPR039779|reactome:R-HSA-210745|entrezgene/locuslink:222546(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16432756(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:R+QlHzmQeSg5ysiHPI4G8+NSYhE9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:zucX9mNZ1DLFnMMhTONa4D4z424 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8HWS3 uniprotkb:P0C7X2 intact:EBI-746118|uniprotkb:Q5T6B3|ensembl:ENSP00000332208 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:rfx6_human(display_long)|uniprotkb:RFX6(gene name)|psi-mi:RFX6(display_short)|uniprotkb:RFXDC1(gene name synonym)|uniprotkb:Regulatory factor X 6(gene name synonym)|uniprotkb:Regulatory factor X domain-containing protein 1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476135 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_775831.2|ensembl:ENSG00000185002(gene)|ensembl:ENST00000332958(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001228"(DNA-binding transcription activator activity, RNA polymerase II-specific)|go:"GO:0003309"(type B pancreatic cell differentiation)|go:"GO:0003310"(pancreatic A cell differentiation)|go:"GO:0003311"(pancreatic D cell differentiation)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0031018"(endocrine pancreas development)|go:"GO:0035774"(positive regulation of insulin secretion involved in cellular response to glucose stimulus)|go:"GO:0042593"(glucose homeostasis)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0050796"(regulation of insulin secretion)|go:"GO:0090104"(pancreatic epsilon cell differentiation)|interpro:IPR003150(DNA-binding RFX)|interpro:IPR036388|interpro:IPR036390|interpro:IPR039779|reactome:R-HSA-210745|entrezgene/locuslink:222546(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16432756(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:R+QlHzmQeSg5ysiHPI4G8+NSYhE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:nuxUn8iRe6JuWcR6omqlz7J4U5M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H257-2 uniprotkb:P0C7X2 intact:EBI-11530605|ensembl:ENSP00000360799 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q9h257-2(display_long)|uniprotkb:CARD9(gene name)|psi-mi:CARD9(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476784 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751319(isoform-parent)|uniprotkb:Q9H257-2(isoform-parent)|ensembl:ENSG00000187796(gene)|ensembl:ENST00000371734(transcript)|entrezgene/locuslink:64170(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16435972(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZXH7B3K5NAzF1LZaeK50ciH1RTE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:qW1oJ40QhcW5KgpcASLmqoB7ZNY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95751 uniprotkb:P0C7X2 intact:EBI-740738|ensembl:ENSP00000359557|uniprotkb:Q6IAR6 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:ldoc1_human(display_long)|uniprotkb:Leucine zipper protein down-regulated in cancer cells(gene name synonym)|uniprotkb:LDOC1(gene name)|psi-mi:LDOC1(display_short)|uniprotkb:BCUR1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476400 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036449.1|ensembl:ENSG00000182195(gene)|ensembl:ENST00000370526(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071225"(cellular response to muramyl dipeptide)|interpro:IPR032549|interpro:IPR032567|entrezgene/locuslink:23641(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433633(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Ediu0oNiZ/+YVY8l3fNdgP5A+v09606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:cIJG+vN56IGKvufmyqZB9RmhJQU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O95751 uniprotkb:A0A0S2Z6P0 intact:EBI-740738|ensembl:ENSP00000359557|uniprotkb:Q6IAR6 intact:EBI-16429989 psi-mi:ldoc1_human(display_long)|uniprotkb:Leucine zipper protein down-regulated in cancer cells(gene name synonym)|uniprotkb:LDOC1(gene name)|psi-mi:LDOC1(display_short)|uniprotkb:BCUR1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476416 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_036449.1|ensembl:ENSG00000182195(gene)|ensembl:ENST00000370526(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0071222"(cellular response to lipopolysaccharide)|go:"GO:0071225"(cellular response to muramyl dipeptide)|interpro:IPR032549|interpro:IPR032567|entrezgene/locuslink:23641(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16433633(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Ediu0oNiZ/+YVY8l3fNdgP5A+v09606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:XH3NHdAwFxuQPZudHw1lJZ2Jd/M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 uniprotkb:P0C7X2 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476432 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16433971(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:vyxSQmZH8l1nomX53OAlZ8vo7Oo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:A2RRN7 uniprotkb:P0C7X2 intact:EBI-10179719|intact:EBI-12002280|intact:EBI-12753183 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:a2rrn7_human(display_long)|uniprotkb:CADPS(gene name)|psi-mi:CADPS(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477112 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR033227|interpro:IPR001849(Pleckstrin-like)|interpro:IPR010439(Protein of unknown function DUF1041)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR014770(Munc13 homology 1)|go:"GO:0015031"(protein transport)|go:"GO:0016079"(synaptic vesicle exocytosis)|go:"GO:0031410"(cytoplasmic vesicle)|go:"GO:0046872"(metal ion binding)|go:"GO:0098793"(presynapse)|go:"GO:1990504"(dense core granule exocytosis)|entrezgene/locuslink:8618(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16437185(see-also)|intact:EBI-16437195(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:N5Akbv6I+Z6ng6fGGng679DVg9U9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:3L6u/BQOBN01TD0uSXsVXD4To1I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:A0A0S2Z6P0 - intact:EBI-16429989 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477096 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16437099(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:tC1rxWIvqfufMI2CCOW3asbBtfA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16437007 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:"ccsb orf id: 56711"(display_short)|psi-mi:EBI-16437007(display_long) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477080 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:386682(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16437099(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:+TyoW1FiRm0mclGU0YkO2RWsRGo9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:Rj51Sm51x1jb4F/OwhBCPjO7tf0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P15884-3 uniprotkb:P0C7X2 intact:EBI-13636688|ensembl:ENSP00000346440|ensembl:ENSP00000486670 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:p15884-3(display_long)|uniprotkb:Class B basic helix-loop-helix protein 19(gene name synonym)|uniprotkb:Immunoglobulin transcription factor 2(gene name synonym)|uniprotkb:SL3-3 enhancer factor 2(gene name synonym)|uniprotkb:B+(isoform synonym)|uniprotkb:TCF4(gene name)|psi-mi:TCF4(display_short)|uniprotkb:BHLHB19(gene name synonym)|uniprotkb:ITF2(gene name synonym)|uniprotkb:SEF2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477063 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-533224(isoform-parent)|ensembl:ENSG00000196628(gene)|ensembl:ENST00000354452(transcript)|ensembl:ENST00000629387(transcript)|uniprotkb:P15884-3(isoform-parent)|entrezgene/locuslink:6925(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436901(see-also)|intact:EBI-16436911(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZNbTMfCK9F8zDtvfNHuHnQpJM7w9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:TuXBhajKajlEwZ0fAKz48OuXZF8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P60411 uniprotkb:A0A0S2Z6P0 intact:EBI-10172052|uniprotkb:A2RRG1|uniprotkb:Q70LJ1|uniprotkb:A6NIR9|ensembl:ENSP00000381009 intact:EBI-16429989 psi-mi:kr109_human(display_long)|uniprotkb:KRTAP10-9(gene name)|psi-mi:KRTAP10-9(display_short)|uniprotkb:High sulfur keratin-associated protein 10.9(gene name synonym)|uniprotkb:KAP10.9(gene name synonym)|uniprotkb:KAP18-9(gene name synonym)|uniprotkb:KRTAP10.9(gene name synonym)|uniprotkb:KRTAP18-9(gene name synonym)|uniprotkb:KRTAP18.9(gene name synonym)|uniprotkb:Keratin-associated protein 10.9(gene name synonym)|uniprotkb:Keratin-associated protein 18-9(gene name synonym)|uniprotkb:Keratin-associated protein 18.9(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477047 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_941963.2|ensembl:ENSG00000221837(gene)|ensembl:ENST00000397911(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|refseq:NP_941965.2|entrezgene/locuslink:386676(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436841(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nh6MH4M6TUhmqNrV+Oj14IwKk389606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:txRtkDQ8Sh0q3cx5p85pywUnXc8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P60411 uniprotkb:P0C7X2 intact:EBI-10172052|uniprotkb:A2RRG1|uniprotkb:Q70LJ1|uniprotkb:A6NIR9|ensembl:ENSP00000381009 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:kr109_human(display_long)|uniprotkb:KRTAP10-9(gene name)|psi-mi:KRTAP10-9(display_short)|uniprotkb:High sulfur keratin-associated protein 10.9(gene name synonym)|uniprotkb:KAP10.9(gene name synonym)|uniprotkb:KAP18-9(gene name synonym)|uniprotkb:KRTAP10.9(gene name synonym)|uniprotkb:KRTAP18-9(gene name synonym)|uniprotkb:KRTAP18.9(gene name synonym)|uniprotkb:Keratin-associated protein 10.9(gene name synonym)|uniprotkb:Keratin-associated protein 18-9(gene name synonym)|uniprotkb:Keratin-associated protein 18.9(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477031 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_941963.2|ensembl:ENSG00000221837(gene)|ensembl:ENST00000397911(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|refseq:NP_941965.2|entrezgene/locuslink:386676(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436841(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Nh6MH4M6TUhmqNrV+Oj14IwKk389606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:eeu43XxUpcpxMrVS7hCrcf007uM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P59991 uniprotkb:A0A0S2Z6P0 intact:EBI-10176379|uniprotkb:Q0VAS4|uniprotkb:A6NIS1|uniprotkb:A6NMS9|ensembl:ENSP00000354001 intact:EBI-16429989 psi-mi:kr122_human(display_long)|uniprotkb:KRTAP12-2(gene name)|psi-mi:KRTAP12-2(display_short)|uniprotkb:High sulfur keratin-associated protein 12.2(gene name synonym)|uniprotkb:KAP12.2(gene name synonym)|uniprotkb:KRTAP12.2(gene name synonym)|uniprotkb:Keratin-associated protein 12.2(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477015 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_859012.1|ensembl:ENSG00000221864(gene)|ensembl:ENST00000360770(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|interpro:IPR007951(PMG)|reactome:R-HSA-6805567|entrezgene/locuslink:353323(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436757(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:No3kGE8TWTn4MyHaXXBiGmc5LIk9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:y84+U58Mka0QoBejo9AkkeuTB+c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P59991 uniprotkb:P0C7X2 intact:EBI-10176379|uniprotkb:Q0VAS4|uniprotkb:A6NIS1|uniprotkb:A6NMS9|ensembl:ENSP00000354001 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:kr122_human(display_long)|uniprotkb:KRTAP12-2(gene name)|psi-mi:KRTAP12-2(display_short)|uniprotkb:High sulfur keratin-associated protein 12.2(gene name synonym)|uniprotkb:KAP12.2(gene name synonym)|uniprotkb:KRTAP12.2(gene name synonym)|uniprotkb:Keratin-associated protein 12.2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476999 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_859012.1|ensembl:ENSG00000221864(gene)|ensembl:ENST00000360770(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|interpro:IPR007951(PMG)|reactome:R-HSA-6805567|entrezgene/locuslink:353323(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436757(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:No3kGE8TWTn4MyHaXXBiGmc5LIk9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:7aBfaFtYmsN3f4d+Vuf3Lbwi+NY true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q63HR2 uniprotkb:A0A0S2Z6P0 intact:EBI-949753|ensembl:ENSP00000319684|uniprotkb:A2VDF2|uniprotkb:A2VDF3|uniprotkb:A2VDI8|uniprotkb:Q2NL80|uniprotkb:Q76MW6|uniprotkb:Q7Z5T9|uniprotkb:Q8NFF9|uniprotkb:Q8NFG0|uniprotkb:Q96P25|uniprotkb:Q9NT29|uniprotkb:Q9UPS7|uniprotkb:A5PKY4 intact:EBI-16429989 psi-mi:tns2_human(display_long)|uniprotkb:TNS2(gene name)|psi-mi:TNS2(display_short)|uniprotkb:C1 domain-containing phosphatase and tensin homolog(gene name synonym)|uniprotkb:KIAA1075(gene name synonym)|uniprotkb:TENC1(gene name synonym)|uniprotkb:Tensin-like C1 domain-containing phosphatase(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476980 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000314250(transcript)|go:"GO:0001822"(kidney development)|go:"GO:0004725"(protein tyrosine phosphatase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0014850"(response to muscle activity)|go:"GO:0019725"(cellular homeostasis)|go:"GO:0019900"(kinase binding)|go:"GO:0032963"(collagen metabolic process)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035335"(peptidyl-tyrosine dephosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046872"(metal ion binding)|go:"GO:0048871"(multicellular organismal homeostasis)|interpro:IPR000980(SH2 motif)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR006020(Phosphotyrosine interaction region)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013625(Tensin phosphotyrosine-binding domain)|interpro:IPR014020(C2 tensin-type)|interpro:IPR029021|interpro:IPR029023|interpro:IPR033929|interpro:IPR035012|interpro:IPR035892|interpro:IPR036860|mint:Q63HR2|rcsb pdb:2DKQ|rcsb pdb:2KNO|rcsb pdb:2L6K|rcsb pdb:2LOZ|rcsb pdb:3HQC|ensembl:ENSG00000111077(gene)|refseq:NP_056134.2|refseq:NP_736610.2|refseq:NP_938072.1|entrezgene/locuslink:23371(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436705(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:uobqTi6g78V5Iib3uRGGhqjSt7o9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:jXQO23obzinqUYhUBOAwC/gtENk true sufficient binding region:125-1409 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q63HR2 uniprotkb:P0C7X2 intact:EBI-949753|ensembl:ENSP00000319684|uniprotkb:A2VDF2|uniprotkb:A2VDF3|uniprotkb:A2VDI8|uniprotkb:Q2NL80|uniprotkb:Q76MW6|uniprotkb:Q7Z5T9|uniprotkb:Q8NFF9|uniprotkb:Q8NFG0|uniprotkb:Q96P25|uniprotkb:Q9NT29|uniprotkb:Q9UPS7|uniprotkb:A5PKY4 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:tns2_human(display_long)|uniprotkb:TNS2(gene name)|psi-mi:TNS2(display_short)|uniprotkb:C1 domain-containing phosphatase and tensin homolog(gene name synonym)|uniprotkb:KIAA1075(gene name synonym)|uniprotkb:TENC1(gene name synonym)|uniprotkb:Tensin-like C1 domain-containing phosphatase(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476961 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENST00000314250(transcript)|go:"GO:0001822"(kidney development)|go:"GO:0004725"(protein tyrosine phosphatase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0014850"(response to muscle activity)|go:"GO:0019725"(cellular homeostasis)|go:"GO:0019900"(kinase binding)|go:"GO:0032963"(collagen metabolic process)|go:"GO:0035264"(multicellular organism growth)|go:"GO:0035335"(peptidyl-tyrosine dephosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042802"(identical protein binding)|go:"GO:0046627"(negative regulation of insulin receptor signaling pathway)|go:"GO:0046872"(metal ion binding)|go:"GO:0048871"(multicellular organismal homeostasis)|interpro:IPR000980(SH2 motif)|interpro:IPR002219(Protein kinase C, phorbol ester/diacylglycerol binding)|interpro:IPR006020(Phosphotyrosine interaction region)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013625(Tensin phosphotyrosine-binding domain)|interpro:IPR014020(C2 tensin-type)|interpro:IPR029021|interpro:IPR029023|interpro:IPR033929|interpro:IPR035012|interpro:IPR035892|interpro:IPR036860|mint:Q63HR2|rcsb pdb:2DKQ|rcsb pdb:2KNO|rcsb pdb:2L6K|rcsb pdb:2LOZ|rcsb pdb:3HQC|ensembl:ENSG00000111077(gene)|refseq:NP_056134.2|refseq:NP_736610.2|refseq:NP_938072.1|entrezgene/locuslink:23371(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436705(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:uobqTi6g78V5Iib3uRGGhqjSt7o9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:9qsWCUZQggcDE5GSjc6Jr42XbmM true sufficient binding region:125-1409 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15323 uniprotkb:P0C7X2 intact:EBI-948001|uniprotkb:Q9UE12|ensembl:ENSP00000251645|ensembl:ENSP00000460739 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:k1h1_human(display_long)|uniprotkb:Hair keratin, type I Ha1(gene name synonym)|uniprotkb:Keratin-31(gene name synonym)|uniprotkb:KRT31(gene name)|psi-mi:KRT31(display_short)|uniprotkb:HHA1(gene name synonym)|uniprotkb:HKA1(gene name synonym)|uniprotkb:KRTHA1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476944 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002268.2|ensembl:ENSG00000094796(gene)|ensembl:ENSG00000262993(gene)|ensembl:ENST00000251645(transcript)|ensembl:ENST00000573281(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005615"(extracellular space)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3881(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436625(see-also)|intact:EBI-16436635(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ur97LEvtqaqu3wh7iaX4HhN163k9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:wN8CXYYsHSn5nNZJiYKdUbfd5Hw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR5 uniprotkb:A0A0S2Z6P0 intact:EBI-10172511|uniprotkb:A0JP64|ensembl:ENSP00000366955 intact:EBI-16429989 psi-mi:kra42_human(display_long)|uniprotkb:KRTAP4-2(gene name)|psi-mi:KRTAP4-2(display_short)|uniprotkb:KAP4.2(gene name synonym)|uniprotkb:KRTAP4.2(gene name synonym)|uniprotkb:Keratin-associated protein 4.2(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 4.2(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476928 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149051.1|ensembl:ENSG00000244537(gene)|ensembl:ENST00000377726(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|entrezgene/locuslink:85291(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436595(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8Ecqy++IpYBBxTj/kQBOfnGxoiM9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:ePjNApUmS5w/hVmBBaokNkT3mMs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BYR5 uniprotkb:P0C7X2 intact:EBI-10172511|uniprotkb:A0JP64|ensembl:ENSP00000366955 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:kra42_human(display_long)|uniprotkb:KRTAP4-2(gene name)|psi-mi:KRTAP4-2(display_short)|uniprotkb:KAP4.2(gene name synonym)|uniprotkb:KRTAP4.2(gene name synonym)|uniprotkb:Keratin-associated protein 4.2(gene name synonym)|uniprotkb:Ultrahigh sulfur keratin-associated protein 4.2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476912 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_149051.1|ensembl:ENSG00000244537(gene)|ensembl:ENST00000377726(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0042802"(identical protein binding)|go:"GO:0045095"(keratin filament)|interpro:IPR002494(Keratin, high sulphur B2 protein)|reactome:R-HSA-6805567|entrezgene/locuslink:85291(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436595(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:8Ecqy++IpYBBxTj/kQBOfnGxoiM9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:3ZlUWoa3t9ay5DCVia0zxqhcmWk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:A0A0C3SFZ9 uniprotkb:A0A0S2Z6P0 intact:EBI-11977403|ensembl:ENSP00000473001 intact:EBI-16429989 psi-mi:a0a0c3sfz9_human(display_long)|uniprotkb:FCHO1(gene name)|psi-mi:FCHO1(display_short)|uniprotkb:hCG_2000568(orf name) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476896 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000130475(gene)|ensembl:ENST00000594202(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0072583"(clathrin-dependent endocytosis)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR018808|interpro:IPR027267|interpro:IPR028565|interpro:IPR030121|interpro:IPR031160|interpro:IPR042735|go:"GO:0005829"(cytosol)|refseq:NP_001154829.1|entrezgene/locuslink:23149(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436458(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YfVbZHntDpLjsmnH0GM2eaqEGjY9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:FfE0QV0usCjiDfoltzZdBvHfs6I true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:A0A0C3SFZ9 uniprotkb:P0C7X2 intact:EBI-11977403|ensembl:ENSP00000473001 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:a0a0c3sfz9_human(display_long)|uniprotkb:FCHO1(gene name)|psi-mi:FCHO1(display_short)|uniprotkb:hCG_2000568(orf name) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476880 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000130475(gene)|ensembl:ENST00000594202(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005905"(clathrin-coated pit)|go:"GO:0072583"(clathrin-dependent endocytosis)|interpro:IPR001060(Cdc15/Fes/CIP4)|interpro:IPR018808|interpro:IPR027267|interpro:IPR028565|interpro:IPR030121|interpro:IPR031160|interpro:IPR042735|go:"GO:0005829"(cytosol)|refseq:NP_001154829.1|entrezgene/locuslink:23149(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436458(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YfVbZHntDpLjsmnH0GM2eaqEGjY9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:Kt7CK+ltILCt5uiP2wV9EUEd6Eg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z3S9 uniprotkb:A0A0S2Z6P0 intact:EBI-945833|intact:EBI-2859688|uniprotkb:Q5BKT8|uniprotkb:Q5VTG9|uniprotkb:Q5XG84|uniprotkb:Q6P192|uniprotkb:Q8NC23|uniprotkb:Q8WUQ9|uniprotkb:Q96FY1|ensembl:ENSP00000354929 intact:EBI-16429989 psi-mi:nt2na_human(display_long)|uniprotkb:NOTCH2NLA(gene name)|psi-mi:NOTCH2NLA(display_short)|uniprotkb:N2N(gene name synonym)|uniprotkb:NOTCH2NL(gene name synonym)|uniprotkb:Notch homolog 2 N-terminal-like protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476864 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_982283.2|refseq:XP_016855384.1|refseq:XP_016855385.1|refseq:XP_016855386.1|refseq:XP_016855387.1|refseq:XP_016858537.1|refseq:XP_016858538.1|refseq:XP_016858539.1|refseq:XP_016858540.1|dip:DIP-47315N|refseq:XP_006711766.1|refseq:XP_006726418.1|ensembl:ENSG00000264343(gene)|ensembl:ENST00000362074(transcript)|go:"GO:0005112"(Notch binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005737"(cytoplasm)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030154"(cell differentiation)|go:"GO:0045747"(positive regulation of Notch signaling pathway)|interpro:IPR000152(Aspartic acid and asparagine hydroxylation site)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR001881(EGF-like calcium-binding)|interpro:IPR018097|mint:Q7Z3S9|entrezgene/locuslink:388677(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16436368(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FYOai/KkVz8zMsxjNnyZ6FNfcTU9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:IdzTEBf5+nD10VTZVl4gAXXQy/Y true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7Z3S9 uniprotkb:P0C7X2 intact:EBI-945833|intact:EBI-2859688|uniprotkb:Q5BKT8|uniprotkb:Q5VTG9|uniprotkb:Q5XG84|uniprotkb:Q6P192|uniprotkb:Q8NC23|uniprotkb:Q8WUQ9|uniprotkb:Q96FY1|ensembl:ENSP00000354929 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:nt2na_human(display_long)|uniprotkb:NOTCH2NLA(gene name)|psi-mi:NOTCH2NLA(display_short)|uniprotkb:N2N(gene name synonym)|uniprotkb:NOTCH2NL(gene name synonym)|uniprotkb:Notch homolog 2 N-terminal-like protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476848 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_982283.2|refseq:XP_016855384.1|refseq:XP_016855385.1|refseq:XP_016855386.1|refseq:XP_016855387.1|refseq:XP_016858537.1|refseq:XP_016858538.1|refseq:XP_016858539.1|refseq:XP_016858540.1|dip:DIP-47315N|refseq:XP_006711766.1|refseq:XP_006726418.1|ensembl:ENSG00000264343(gene)|ensembl:ENST00000362074(transcript)|go:"GO:0005112"(Notch binding)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005737"(cytoplasm)|go:"GO:0007219"(Notch signaling pathway)|go:"GO:0021987"(cerebral cortex development)|go:"GO:0030154"(cell differentiation)|go:"GO:0045747"(positive regulation of Notch signaling pathway)|interpro:IPR000152(Aspartic acid and asparagine hydroxylation site)|interpro:IPR000742(EGF-like, type 3)|interpro:IPR001881(EGF-like calcium-binding)|interpro:IPR018097|mint:Q7Z3S9|entrezgene/locuslink:388677(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436368(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FYOai/KkVz8zMsxjNnyZ6FNfcTU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:NrGsIS6oMvf2aYZLC7jt2dfq+3c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16436244 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:"ccsb orf id: 54692"(display_short)|psi-mi:EBI-16436244(display_long) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476832 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:57594(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436298(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:pQLRUATtfhRxD9ugVFmKu+SJGB89606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:mh/NGgpgao9T98FXX6UkVbfhel0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q6A162 uniprotkb:P0C7X2 intact:EBI-10171697|uniprotkb:Q6IFU5|ensembl:ENSP00000366984|ensembl:ENSP00000381500|ensembl:ENSP00000459621|ensembl:ENSP00000479080|ensembl:ENSP00000506768 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:k1c40_human(display_long)|uniprotkb:KRT40(gene name)|psi-mi:KRT40(display_short)|uniprotkb:Cytokeratin-40(gene name synonym)|uniprotkb:KA36(gene name synonym)|uniprotkb:Keratin-40(gene name synonym)|uniprotkb:Type I hair keratin Ka36(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476816 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_872303.2|ensembl:ENSG00000204889(gene)|ensembl:ENSG00000262845(gene)|ensembl:ENST00000377755(transcript)|ensembl:ENST00000398486(transcript)|ensembl:ENST00000576967(transcript)|ensembl:ENST00000610983(transcript)|ensembl:ENST00000684280(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|interpro:IPR002957(Keratin, type I)|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:125115(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16436224(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:93lmDGFUau1S1lpef2rBMQpkkOA9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:SOBH7IjCC5Y3wO3BbsNut37uQ9s true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9H257-2 uniprotkb:A0A0S2Z6P0 intact:EBI-11530605|ensembl:ENSP00000360799 intact:EBI-16429989 psi-mi:q9h257-2(display_long)|uniprotkb:CARD9(gene name)|psi-mi:CARD9(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476800 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-751319(isoform-parent)|uniprotkb:Q9H257-2(isoform-parent)|ensembl:ENSG00000187796(gene)|ensembl:ENST00000371734(transcript)|entrezgene/locuslink:64170(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16435972(see-also) isoform-comment:No experimental confirmation available. - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ZXH7B3K5NAzF1LZaeK50ciH1RTE9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:XAFfqfxiU0tIgTccebE4AYcg2m8 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9BUZ4 uniprotkb:A0A0S2Z6P0 intact:EBI-3650647|uniprotkb:O75615|uniprotkb:Q14848|uniprotkb:Q2KJU4|uniprotkb:Q2PJN8|ensembl:ENSP00000262395 intact:EBI-16429989 psi-mi:traf4_human(display_long)|uniprotkb:TRAF4(gene name)|psi-mi:TRAF4(display_short)|uniprotkb:CART1(gene name synonym)|uniprotkb:MLN62(gene name synonym)|uniprotkb:RNF83(gene name synonym)|uniprotkb:Cysteine-rich domain associated with RING and Traf domains protein 1(gene name synonym)|uniprotkb:Metastatic lymph node gene 62 protein(gene name synonym)|uniprotkb:RING finger protein 83(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476384 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_004286.2|dip:DIP-40910N|ensembl:ENSG00000076604(gene)|ensembl:ENST00000262395(transcript)|go:"GO:0001650"(fibrillar center)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005923"(bicellular tight junction)|go:"GO:0006915"(apoptotic process)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0007585"(respiratory gaseous exchange by respiratory system)|go:"GO:0008270"(zinc ion binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030323"(respiratory tube development)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0048471"(perinuclear region of cytoplasm)|go:"GO:0050699"(WW domain binding)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027138|interpro:IPR037307|interpro:IPR043211|mint:Q9BUZ4|rcsb pdb:2EOD|rcsb pdb:2YUC|rcsb pdb:3ZJB|rcsb pdb:4K8U|rcsb pdb:4M4E|rcsb pdb:5YC1|entrezgene/locuslink:9618(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16433576(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Bjl/NCcleyKgZb7suHw3AVWpG09606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:VsaqY3aJ9KVOei9PsSePvhAQD7M true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P13646 uniprotkb:P0C7X2 intact:EBI-1223876|uniprotkb:Q53G54|uniprotkb:Q6AZK5|uniprotkb:Q8N240|ensembl:ENSP00000246635 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:k1c13_human(display_long)|uniprotkb:KRT13(gene name)|psi-mi:KRT13(display_short)|uniprotkb:Keratin-13(gene name synonym)|uniprotkb:Cytokeratin-13(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476768 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002265.2|refseq:NP_705694.2|ensembl:ENSG00000171401(gene)|ensembl:ENST00000246635(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0045095"(keratin filament)|go:"GO:0045111"(intermediate filament cytoskeleton)|go:"GO:0070062"(extracellular exosome)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3860(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16435942(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:u65zix/f6VQ+vmbfMhXWqmiERRY9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:nwBAtGil8HP8t+0mN+IGpRTyBB4 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435328 uniprotkb:A0A0S2Z6P0 - intact:EBI-16429989 psi-mi:"ccsb orf id: 52859"(display_short)|psi-mi:EBI-16435328(display_long) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476752 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:64753(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16435360(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FWTUx0ZMr4g1buyVnmwu2LBoxaU9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:s1z0l/6danZtuf0i7ju31YfUexI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16435328 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:"ccsb orf id: 52859"(display_short)|psi-mi:EBI-16435328(display_long) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476736 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:64753(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16435360(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FWTUx0ZMr4g1buyVnmwu2LBoxaU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:rrvFm9J4EO0cnnTkV/Hcd6j94eo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q7L4P6 uniprotkb:P0C7X2 intact:EBI-724373|ensembl:ENSP00000360899|uniprotkb:D3DQ27|uniprotkb:Q96A62|uniprotkb:Q9HAI3|intact:EBI-3044085 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:bend5_human(display_long)|uniprotkb:BEND5(gene name)|psi-mi:BEND5(display_short)|uniprotkb:C1orf165(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476720 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_078879.2|ensembl:ENSG00000162373(gene)|ensembl:ENST00000371833(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR018379|interpro:IPR040391|mint:Q7L4P6|refseq:NP_001289011.1|refseq:XP_011540444.1|refseq:XP_016857823.1|entrezgene/locuslink:79656(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16435234(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:R6OwgNU76FX6tqLRdHVmzEgK8EE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:+PX85qwwZmmTrA2a+gl6dlMUOqo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:A0A0S2Z6P0 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-16429989 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476704 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16435204(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:h5z7rIqXNdf+bribtgzjbSQliqA true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q99750 uniprotkb:P0C7X2 intact:EBI-724076|ensembl:ENSP00000230321|ensembl:ENSP00000362142 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:mdfi_human(display_long)|uniprotkb:Myogenic repressor I-mf(gene name synonym)|uniprotkb:MDFI(gene name)|psi-mi:MDFI(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476688 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_005577.1|ensembl:ENSG00000112559(gene)|ensembl:ENST00000230321(transcript)|ensembl:ENST00000373051(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009950"(dorsal/ventral axis specification)|go:"GO:0030178"(negative regulation of Wnt signaling pathway)|go:"GO:0042802"(identical protein binding)|go:"GO:0042994"(cytoplasmic sequestering of transcription factor)|go:"GO:0043392"(negative regulation of DNA binding)|go:"GO:0048704"(embryonic skeletal system morphogenesis)|go:"GO:0060707"(trophoblast giant cell differentiation)|go:"GO:0140416"(transcription regulator inhibitor activity)|interpro:IPR026134|mint:Q99750|refseq:NP_001287733.1|refseq:NP_001287734.1|refseq:NP_001287735.1|entrezgene/locuslink:4188(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16435204(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:V3vU0fihMOW18DMHAiDbuZ3asNU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:rmcgY77p9F5FpfsQ5m61pbbhtQo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61457 uniprotkb:A0A0S2Z6P0 intact:EBI-740475|ensembl:ENSP00000299299|uniprotkb:P70519|uniprotkb:P80095|uniprotkb:Q9D930 intact:EBI-16429989 psi-mi:phs_human(display_long)|uniprotkb:4-alpha-hydroxy-tetrahydropterin dehydratase(gene name synonym)|uniprotkb:Phenylalanine hydroxylase-stimulating protein(gene name synonym)|uniprotkb:Pterin carbinolamine dehydratase(gene name synonym)|uniprotkb:Dimerization cofactor of hepatocyte nuclear factor 1-alpha(gene name synonym)|uniprotkb:PCBD1(gene name)|psi-mi:PCBD1(display_short)|uniprotkb:DCOH(gene name synonym)|uniprotkb:PCBD(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476672 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000272.1|ensembl:ENSG00000166228(gene)|ensembl:ENST00000299299(transcript)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004505"(phenylalanine 4-monooxygenase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006558"(L-phenylalanine metabolic process)|go:"GO:0006729"(tetrahydrobiopterin biosynthetic process)|go:"GO:0008124"(4-alpha-hydroxytetrahydrobiopterin dehydratase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001533(Transcriptional coactivator/pterin dehydratase)|interpro:IPR036428|mint:P61457|reactome:R-HSA-8964208|refseq:NP_001276726.1|entrezgene/locuslink:5092(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16434965(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WsAu8slwInyWOA2p/z+JqTvyKP49606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:GhdzrvjxQ8rgdat+QclPPnhwTZg true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61457 uniprotkb:P0C7X2 intact:EBI-740475|ensembl:ENSP00000299299|uniprotkb:P70519|uniprotkb:P80095|uniprotkb:Q9D930 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:phs_human(display_long)|uniprotkb:4-alpha-hydroxy-tetrahydropterin dehydratase(gene name synonym)|uniprotkb:Phenylalanine hydroxylase-stimulating protein(gene name synonym)|uniprotkb:Pterin carbinolamine dehydratase(gene name synonym)|uniprotkb:Dimerization cofactor of hepatocyte nuclear factor 1-alpha(gene name synonym)|uniprotkb:PCBD1(gene name)|psi-mi:PCBD1(display_short)|uniprotkb:DCOH(gene name synonym)|uniprotkb:PCBD(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476656 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_000272.1|ensembl:ENSG00000166228(gene)|ensembl:ENST00000299299(transcript)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0004505"(phenylalanine 4-monooxygenase activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006558"(L-phenylalanine metabolic process)|go:"GO:0006729"(tetrahydrobiopterin biosynthetic process)|go:"GO:0008124"(4-alpha-hydroxytetrahydrobiopterin dehydratase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0043393"(regulation of protein binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001533(Transcriptional coactivator/pterin dehydratase)|interpro:IPR036428|mint:P61457|reactome:R-HSA-8964208|refseq:NP_001276726.1|entrezgene/locuslink:5092(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434965(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WsAu8slwInyWOA2p/z+JqTvyKP49606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:K2alx7GmGgdoSQW3QINW5teW+bw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978-2 uniprotkb:P0C7X2 intact:EBI-7060731|ensembl:ENSP00000365439|ensembl:ENSP00000365458|uniprotkb:Q07244-2|intact:MINT-225449 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:p61978-2(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476640 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|ensembl:ENST00000376263(transcript)|ensembl:ENST00000376281(transcript)|intact:EBI-304185(isoform-parent)|uniprotkb:P61978-2(isoform-parent)|entrezgene/locuslink:3190(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434798(see-also) comment:mint - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:FX/iS2YfOhD0ntY2oqpOUetACqg9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:1IoMiuFRC9b7n4FJYsPSlBWI4Os true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96IJ6 uniprotkb:A0A0S2Z5X4 intact:EBI-750953|uniprotkb:A6NJ74|uniprotkb:A8K3Q6|uniprotkb:Q53GI0|uniprotkb:Q9NWC3|uniprotkb:Q9Y5P5|uniprotkb:B3KMT4|ensembl:ENSP00000315925|ensembl:ENSP00000340760|ensembl:ENSP00000350949|ensembl:ENSP00000363016|ensembl:ENSP00000478700|ensembl:ENSP00000506941 intact:EBI-16429014 psi-mi:gmppa_human(display_long)|uniprotkb:GMPPA(gene name)|psi-mi:GMPPA(display_short)|uniprotkb:GTP-mannose-1-phosphate guanylyltransferase alpha(gene name synonym)|uniprotkb:GDP-mannose pyrophosphorylase A(gene name synonym) psi-mi:a0a0s2z5x4_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476624 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_037467.2|refseq:NP_995319.1|refseq:XP_005246543.1|refseq:XP_016859398.1|refseq:XP_016859399.1|refseq:XP_016859400.1|ensembl:ENSG00000144591(gene)|ensembl:ENST00000313597(transcript)|ensembl:ENST00000341142(transcript)|ensembl:ENST00000358215(transcript)|ensembl:ENST00000373908(transcript)|ensembl:ENST00000622191(transcript)|ensembl:ENST00000683946(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0009058"(biosynthetic process)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR005835(Nucleotidyl transferase)|interpro:IPR018357|interpro:IPR029044|mint:Q96IJ6|rcsb pdb:7D72|rcsb pdb:7D73|rcsb pdb:7D74|reactome:R-HSA-446205|entrezgene/locuslink:29926(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|entrezgene/locuslink:146542(identity) intact:EBI-16434579(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ASWzJoQB8W+e2OKYEenXpUJxflI9606 rogid:amQX5Qvpa+WepWcjfBDWTIMjx+s9606 rigid:6EqiMiHgeiTW2hjizeeOqornido true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96IJ6 uniprotkb:P0C7X2 intact:EBI-750953|uniprotkb:A6NJ74|uniprotkb:A8K3Q6|uniprotkb:Q53GI0|uniprotkb:Q9NWC3|uniprotkb:Q9Y5P5|uniprotkb:B3KMT4|ensembl:ENSP00000315925|ensembl:ENSP00000340760|ensembl:ENSP00000350949|ensembl:ENSP00000363016|ensembl:ENSP00000478700|ensembl:ENSP00000506941 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:gmppa_human(display_long)|uniprotkb:GMPPA(gene name)|psi-mi:GMPPA(display_short)|uniprotkb:GTP-mannose-1-phosphate guanylyltransferase alpha(gene name synonym)|uniprotkb:GDP-mannose pyrophosphorylase A(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476608 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_037467.2|refseq:NP_995319.1|refseq:XP_005246543.1|refseq:XP_016859398.1|refseq:XP_016859399.1|refseq:XP_016859400.1|ensembl:ENSG00000144591(gene)|ensembl:ENST00000313597(transcript)|ensembl:ENST00000341142(transcript)|ensembl:ENST00000358215(transcript)|ensembl:ENST00000373908(transcript)|ensembl:ENST00000622191(transcript)|ensembl:ENST00000683946(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0009058"(biosynthetic process)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001451(Bacterial transferase hexapeptide repeat)|interpro:IPR005835(Nucleotidyl transferase)|interpro:IPR018357|interpro:IPR029044|mint:Q96IJ6|rcsb pdb:7D72|rcsb pdb:7D73|rcsb pdb:7D74|reactome:R-HSA-446205|entrezgene/locuslink:29926(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434579(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:ASWzJoQB8W+e2OKYEenXpUJxflI9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:FcKoOUU3Hb8rKBvBGhuM85J4bK0 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NQZ6 uniprotkb:P0C7X2 intact:EBI-747993|uniprotkb:Q5JTF9|uniprotkb:Q9H9C3|uniprotkb:Q9H9H7|uniprotkb:Q9ULQ4|uniprotkb:B2RDC2|uniprotkb:B4DED0|uniprotkb:E7EM74|uniprotkb:B3KVZ5|uniprotkb:G3V1L3|uniprotkb:Q53H73|ensembl:ENSP00000363972 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:zc4h2_human(display_long)|uniprotkb:ZC4H2(gene name)|psi-mi:ZC4H2(display_short)|uniprotkb:KIAA1166(gene name synonym)|uniprotkb:HCA127(gene name synonym)|uniprotkb:Hepatocellular carcinoma-associated antigen 127(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476592 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001171503.1|refseq:NP_061154.1|refseq:NP_001230733.1|refseq:NP_001171504.1|ensembl:ENSG00000126970(gene)|ensembl:ENST00000374839(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0007399"(nervous system development)|go:"GO:0007528"(neuromuscular junction development)|go:"GO:0021522"(spinal cord motor neuron differentiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0045211"(postsynaptic membrane)|go:"GO:0045666"(positive regulation of neuron differentiation)|go:"GO:0046872"(metal ion binding)|interpro:IPR018482|interpro:IPR044069|entrezgene/locuslink:55906(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434453(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:lQr6Z1Cs3RuhckvFry86sAyycBE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:2qN6drLUEjFlAgq2Fpq3APaZqHw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 uniprotkb:A0A0S2Z6P0 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 intact:EBI-16429989 psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476576 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16434443(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:eLDSTWw0N2lP8Yu14kKBGu8cles true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 uniprotkb:P0C7X2 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476560 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434443(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:vyxSQmZH8l1nomX53OAlZ8vo7Oo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P19012 uniprotkb:A0A0S2Z6P0 intact:EBI-739566|uniprotkb:Q53XV8|uniprotkb:Q9BUG4|uniprotkb:B3KQY1|uniprotkb:B3KRA2|uniprotkb:E0CX14|ensembl:ENSP00000254043|ensembl:ENSP00000377546 intact:EBI-16429989 psi-mi:k1c15_human(display_long)|uniprotkb:KRT15(gene name)|psi-mi:KRT15(display_short)|uniprotkb:KRTB(gene name synonym)|uniprotkb:Cytokeratin-15(gene name synonym)|uniprotkb:Keratin-15(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476544 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002266.2|ensembl:ENSG00000171346(gene)|ensembl:ENST00000254043(transcript)|ensembl:ENST00000393976(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|go:"GO:0097110"(scaffold protein binding)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|mint:P19012|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3866(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16434327(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WrZQBYQvrWcfrR5ojWXrXp6spPE9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:2K/3rD3Eplvwqs+g+pTYt+RF4hM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P19012 uniprotkb:P0C7X2 intact:EBI-739566|uniprotkb:Q53XV8|uniprotkb:Q9BUG4|uniprotkb:B3KQY1|uniprotkb:B3KRA2|uniprotkb:E0CX14|ensembl:ENSP00000254043|ensembl:ENSP00000377546 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:k1c15_human(display_long)|uniprotkb:KRT15(gene name)|psi-mi:KRT15(display_short)|uniprotkb:KRTB(gene name synonym)|uniprotkb:Cytokeratin-15(gene name synonym)|uniprotkb:Keratin-15(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476528 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002266.2|ensembl:ENSG00000171346(gene)|ensembl:ENST00000254043(transcript)|ensembl:ENST00000393976(transcript)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005882"(intermediate filament)|go:"GO:0008544"(epidermis development)|go:"GO:0070062"(extracellular exosome)|go:"GO:0097110"(scaffold protein binding)|interpro:IPR002957(Keratin, type I)|interpro:IPR018039|interpro:IPR039008|mint:P19012|reactome:R-HSA-6805567|reactome:R-HSA-6809371|entrezgene/locuslink:3866(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434327(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WrZQBYQvrWcfrR5ojWXrXp6spPE9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:oOX8OE9qQ8E7HaXkJrl/zimTAvI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9P209 uniprotkb:A0A0S2Z6P0 intact:EBI-739498|uniprotkb:Q9BV03|uniprotkb:Q9BWM3|uniprotkb:Q9NVR4|uniprotkb:B4DR26|ensembl:ENSP00000264935 intact:EBI-16429989 psi-mi:cep72_human(display_long)|uniprotkb:CEP72(gene name)|psi-mi:CEP72(display_short)|uniprotkb:KIAA1519(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476512 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060610.2|ensembl:ENSG00000112877(gene)|ensembl:ENST00000264935(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007099"(centriole replication)|go:"GO:0033566"(gamma-tubulin complex localization)|go:"GO:0034451"(centriolar satellite)|go:"GO:1904779"(regulation of protein localization to centrosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003591(Leucine-rich repeat, typical subtype)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR040146|mint:Q9P209|reactome:R-HSA-2565942|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|refseq:XP_011512365.1|dip:DIP-54272N|entrezgene/locuslink:55722(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16434170(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:c00WdgE2iudiQUz3kXNZL5d0nuQ9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:16uA93uouFfVYDws8Qr4YPXbfKs true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9P209 uniprotkb:P0C7X2 intact:EBI-739498|uniprotkb:Q9BV03|uniprotkb:Q9BWM3|uniprotkb:Q9NVR4|uniprotkb:B4DR26|ensembl:ENSP00000264935 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:cep72_human(display_long)|uniprotkb:CEP72(gene name)|psi-mi:CEP72(display_short)|uniprotkb:KIAA1519(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476496 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_060610.2|ensembl:ENSG00000112877(gene)|ensembl:ENST00000264935(transcript)|go:"GO:0005813"(centrosome)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007099"(centriole replication)|go:"GO:0033566"(gamma-tubulin complex localization)|go:"GO:0034451"(centriolar satellite)|go:"GO:1904779"(regulation of protein localization to centrosome)|interpro:IPR001611(Leucine-rich repeat)|interpro:IPR003591(Leucine-rich repeat, typical subtype)|interpro:IPR003603(U2A'/phosphoprotein 32 family A, C-terminal)|interpro:IPR032675|interpro:IPR040146|mint:Q9P209|reactome:R-HSA-2565942|reactome:R-HSA-380320|reactome:R-HSA-5620912|reactome:R-HSA-8854518|reactome:R-HSA-380259|reactome:R-HSA-380270|reactome:R-HSA-380284|refseq:XP_011512365.1|dip:DIP-54272N|entrezgene/locuslink:55722(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434170(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:c00WdgE2iudiQUz3kXNZL5d0nuQ9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:1QtWoRNWUzLGcuL2k/sILgRyaUM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96R06 uniprotkb:A0A0S2Z6P0 intact:EBI-413317|uniprotkb:O95213|uniprotkb:Q9BWE8|uniprotkb:Q9NT17|uniprotkb:Q9UFE6|intact:EBI-28972684|ensembl:ENSP00000323300 intact:EBI-16429989 psi-mi:spag5_human(display_long)|uniprotkb:SPAG5(gene name)|psi-mi:SPAG5(display_short)|uniprotkb:Astrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Deepest(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476480 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006452.3|ensembl:ENSP00000323300|ensembl:ENSG00000076382(gene)|ensembl:ENST00000321765(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|mint:Q96R06|dip:DIP-30998N|entrezgene/locuslink:10615(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16434160(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WOMksaINKpqSxqeGIzbmcSRcgdw9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:Ydkc93ODUO3H1cXfizUyKtDyQDc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96R06 uniprotkb:P0C7X2 intact:EBI-413317|uniprotkb:O95213|uniprotkb:Q9BWE8|uniprotkb:Q9NT17|uniprotkb:Q9UFE6|intact:EBI-28972684|ensembl:ENSP00000323300 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:spag5_human(display_long)|uniprotkb:SPAG5(gene name)|psi-mi:SPAG5(display_short)|uniprotkb:Astrin(gene name synonym)|uniprotkb:Mitotic spindle-associated protein p126(gene name synonym)|uniprotkb:Deepest(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476464 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_006452.3|ensembl:ENSP00000323300|ensembl:ENSG00000076382(gene)|ensembl:ENST00000321765(transcript)|go:"GO:0000070"(mitotic sister chromatid segregation)|go:"GO:0000776"(kinetochore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007051"(spindle organization)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008017"(microtubule binding)|go:"GO:0016604"(nuclear body)|go:"GO:0030496"(midbody)|go:"GO:0032388"(positive regulation of intracellular transport)|go:"GO:0034451"(centriolar satellite)|go:"GO:0035253"(ciliary rootlet)|go:"GO:0035371"(microtubule plus-end)|go:"GO:0036064"(ciliary basal body)|go:"GO:0051294"(establishment of spindle orientation)|go:"GO:0051301"(cell division)|go:"GO:0051988"(regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0071539"(protein localization to centrosome)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090235"(regulation of metaphase plate congression)|go:"GO:0097431"(mitotic spindle pole)|go:"GO:1905832"(positive regulation of spindle assembly)|interpro:IPR028728|mint:Q96R06|dip:DIP-30998N|entrezgene/locuslink:10615(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16434160(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:WOMksaINKpqSxqeGIzbmcSRcgdw9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:6WFNPDQhXctyR5/nAricutmgofc true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q15654 uniprotkb:A0A0S2Z6P0 intact:EBI-742327|uniprotkb:O15170|uniprotkb:O15275|uniprotkb:Q9BTB2|uniprotkb:Q9BUE5|uniprotkb:Q9BXP3|uniprotkb:Q9UNT4|uniprotkb:A4D2E7|ensembl:ENSP00000200457|uniprotkb:F2ZC07|uniprotkb:F2ZC08 intact:EBI-16429989 psi-mi:trip6_human(display_long)|uniprotkb:TRIP6(gene name)|psi-mi:TRIP6(display_short)|uniprotkb:OIP1(gene name synonym)|uniprotkb:Opa-interacting protein 1(gene name synonym)|uniprotkb:Zyxin-related protein 1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16476448 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_003293.2|ensembl:ENSP00000200457|ensembl:ENST00000417475|ensembl:ENSP00000413817|ensembl:ENST00000437505|ensembl:ENSP00000410736|ensembl:ENST00000619988|ensembl:ENSP00000479865|ensembl:ENSG00000087077(gene)|ensembl:ENST00000200457(transcript)|go:"GO:0001725"(stress fiber)|go:"GO:0003723"(RNA binding)|go:"GO:0005149"(interleukin-1 receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005856"(cytoskeleton)|go:"GO:0005886"(plasma membrane)|go:"GO:0005925"(focal adhesion)|go:"GO:0007165"(signal transduction)|go:"GO:0019900"(kinase binding)|go:"GO:0030335"(positive regulation of cell migration)|go:"GO:0043009"(chordate embryonic development)|go:"GO:0046872"(metal ion binding)|go:"GO:0046966"(thyroid hormone receptor binding)|go:"GO:0048041"(focal adhesion assembly)|go:"GO:1901224"(positive regulation of NIK/NF-kappaB signaling)|interpro:IPR001781(Zinc finger, LIM-type)|mint:Q15654|rcsb pdb:1X61|rcsb pdb:2DLO|dip:DIP-34466N|entrezgene/locuslink:7205(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16433971(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:9Okf3b6sMMwX5awAx991GN9iSsQ9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:eLDSTWw0N2lP8Yu14kKBGu8cles true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:P0C7X2 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477129 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16438091(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:NeA5Bhr8f7g12DW1wO7ZFWRhqoo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:O75478 uniprotkb:A0A0S2Z6P0 intact:EBI-742268|uniprotkb:A8MVD0|uniprotkb:B3KMU9|uniprotkb:Q9UCW2|uniprotkb:Q9UP49|intact:EBI-1204772|uniprotkb:Q9BVJ0|ensembl:ENSP00000481283|ensembl:ENSP00000482484|ensembl:ENSP00000488016 intact:EBI-16429989 psi-mi:tad2a_human(display_long)|uniprotkb:TADA2A(gene name)|psi-mi:TADA2A(display_short)|uniprotkb:TADA2L(gene name synonym)|uniprotkb:Transcriptional adapter 2-like(gene name synonym)|uniprotkb:KL04P(orf name) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477145 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001159577.2|refseq:NP_001278847.1|refseq:NP_001479.4|refseq:NP_597683.3|go:"GO:0000125"|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0070461"(SAGA-type complex)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|mint:O75478|rcsb pdb:1X41|reactome:R-HSA-3214847|ensembl:ENST00000633468(transcript)|ensembl:ENSG00000277104(gene)|ensembl:ENST00000617828(transcript)|ensembl:ENST00000622522(transcript)|dip:DIP-28151N|entrezgene/locuslink:6871(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16438091(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:GoQFsH/fQmhFkH04dCJrMWwZH589606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:7l6zAgauzuru4ydPeS/6aR2ibTo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q08379 uniprotkb:P0C7X2 intact:EBI-618309|intact:EBI-28970132|ensembl:ENSP00000478799|uniprotkb:Q6GRM9|uniprotkb:Q9BRB0|uniprotkb:Q9NYF9|uniprotkb:A0A0C4DGS5|intact:EBI-11522202 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:goga2_human(display_long)|uniprotkb:GOLGA2(gene name)|psi-mi:GOLGA2(display_short)|uniprotkb:130 kDa cis-Golgi matrix protein(gene name synonym)|uniprotkb:GM130 autoantigen(gene name synonym)|uniprotkb:Golgin-95(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477161 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000167110(gene)|ensembl:ENST00000611957(transcript)|go:"GO:0000137"(Golgi cis cisterna)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000922"(spindle pole)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0005874"(microtubule)|go:"GO:0006486"(protein glycosylation)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0007020"(microtubule nucleation)|go:"GO:0007030"(Golgi organization)|go:"GO:0007098"(centrosome cycle)|go:"GO:0008017"(microtubule binding)|go:"GO:0008356"(asymmetric cell division)|go:"GO:0010507"(negative regulation of autophagy)|go:"GO:0015031"(protein transport)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019905"(syntaxin binding)|go:"GO:0030134"(COPII-coated ER to Golgi transport vesicle)|go:"GO:0032091"(negative regulation of protein binding)|go:"GO:0032580"(Golgi cisterna membrane)|go:"GO:0033116"(endoplasmic reticulum-Golgi intermediate compartment membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0045296"(cadherin binding)|go:"GO:0051225"(spindle assembly)|go:"GO:0051289"(protein homotetramerization)|go:"GO:0060050"(positive regulation of protein glycosylation)|go:"GO:0061676"(importin-alpha family protein binding)|go:"GO:0072686"(mitotic spindle)|go:"GO:0090161"(Golgi ribbon formation)|go:"GO:0090166"(Golgi disassembly)|go:"GO:0090306"(meiotic spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|interpro:IPR024858|interpro:IPR043937|interpro:IPR043976|mint:Q08379|rcsb pdb:4REY|rcsb pdb:6IW8|rcsb pdb:6IWA|rcsb pdb:6K06|reactome:R-HSA-162658|reactome:R-HSA-204005|reactome:R-HSA-6807878|reactome:R-HSA-8862803|refseq:NP_004477.3|ensembl:ENSP00000478799|dip:DIP-34271N|entrezgene/locuslink:2801(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16438674(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vIlRg4sJ2oBiARNnyerGMaVr5ZU9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:Q6vQ35jSx5hOsBoj1ho5wRdaZqk true sufficient binding region:383-1002 - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NYB9-2 uniprotkb:P0C7X2 intact:EBI-11096309|ensembl:ENSP00000261017 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q9nyb9-2(display_long)|uniprotkb:ABI2(gene name)|psi-mi:ABI2(display_short)|uniprotkb:ARGBPIA(gene name synonym)|uniprotkb:Abelson interactor 2(gene name synonym)|uniprotkb:Abl-binding protein 3(gene name synonym)|uniprotkb:Arg-binding protein 1(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477180 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-743598(isoform-parent)|ensembl:ENSG00000138443(gene)|ensembl:ENST00000261017(transcript)|uniprotkb:Q9NYB9-2(isoform-parent)|entrezgene/locuslink:10152(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16438726(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VNi9aUeavD8+CCi+n1DXS+7mmbs9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:pTKXz4eljW6tWkORjUMcjh45XbE true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978 uniprotkb:P0C7X2 intact:EBI-304185|intact:EBI-28971491|ensembl:ENSP00000317788|ensembl:ENSP00000353552|uniprotkb:Q07244|uniprotkb:Q15671|uniprotkb:Q59F98|uniprotkb:Q60577|uniprotkb:Q922Y7|uniprotkb:Q96J62|uniprotkb:Q5T6W4|intact:EBI-3440248|uniprotkb:Q6IBN1 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:hnrpk_human(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477225 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|go:"GO:0010988"(regulation of low-density lipoprotein particle clearance)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0042802"(identical protein binding)|ensembl:ENST00000351839(transcript)|ensembl:ENST00000360384(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000785"(chromatin)|go:"GO:0002102"(podosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006396"(RNA processing)|go:"GO:0007165"(signal transduction)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0042995"(cell projection)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1902165"(regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:1905599"(positive regulation of low-density lipoprotein receptor activity)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012987(ROK, N-terminal)|interpro:IPR033090|interpro:IPR036612|mint:P61978|rcsb pdb:1J5K|rcsb pdb:1KHM|rcsb pdb:1ZZI|rcsb pdb:1ZZJ|go:"GO:0043066"(negative regulation of apoptotic process)|reactome:R-HSA-4570464|reactome:R-HSA-72163|reactome:R-HSA-72203|reactome:R-HSA-9610379|rcsb pdb:1ZZK|refseq:NP_002131.2|refseq:NP_112552.1|refseq:NP_112553.1|ensembl:ENSP00000317788|ensembl:ENSP00000353552|ensembl:ENST00000376263|ensembl:ENSP00000365439|ensembl:ENST00000376281|ensembl:ENSP00000365458|refseq:NP_001305115.1|refseq:NP_001305116.1|refseq:NP_001305117.1|refseq:XP_016870157.1|refseq:XP_005252017.1|refseq:XP_005252020.1|refseq:XP_005252022.1|dip:DIP-31805N|entrezgene/locuslink:3190(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16438870(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YZQD5JJkHPUMtZ4XUA9fQkNfXzc9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:dYkYWT4q876ZLYSXiTx6UWw/y0U true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:P61978 uniprotkb:A0A0S2Z6P0 intact:EBI-304185|intact:EBI-28971491|ensembl:ENSP00000317788|ensembl:ENSP00000353552|uniprotkb:Q07244|uniprotkb:Q15671|uniprotkb:Q59F98|uniprotkb:Q60577|uniprotkb:Q922Y7|uniprotkb:Q96J62|uniprotkb:Q5T6W4|intact:EBI-3440248|uniprotkb:Q6IBN1 intact:EBI-16429989 psi-mi:hnrpk_human(display_long)|uniprotkb:HNRNPK(gene name)|psi-mi:HNRNPK(display_short)|uniprotkb:HNRPK(gene name synonym)|uniprotkb:Transformation up-regulated nuclear protein(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477241 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000165119(gene)|go:"GO:0010988"(regulation of low-density lipoprotein particle clearance)|go:"GO:0016020"(membrane)|go:"GO:0019904"(protein domain specific binding)|go:"GO:0042802"(identical protein binding)|ensembl:ENST00000351839(transcript)|ensembl:ENST00000360384(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000785"(chromatin)|go:"GO:0002102"(podosome)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005925"(focal adhesion)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006396"(RNA processing)|go:"GO:0007165"(signal transduction)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0042995"(cell projection)|go:"GO:0045296"(cadherin binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|go:"GO:0048025"(negative regulation of mRNA splicing, via spliceosome)|go:"GO:0048260"(positive regulation of receptor-mediated endocytosis)|go:"GO:0070062"(extracellular exosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:1902165"(regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator)|go:"GO:1905599"(positive regulation of low-density lipoprotein receptor activity)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012987(ROK, N-terminal)|interpro:IPR033090|interpro:IPR036612|mint:P61978|rcsb pdb:1J5K|rcsb pdb:1KHM|rcsb pdb:1ZZI|rcsb pdb:1ZZJ|go:"GO:0043066"(negative regulation of apoptotic process)|reactome:R-HSA-4570464|reactome:R-HSA-72163|reactome:R-HSA-72203|reactome:R-HSA-9610379|rcsb pdb:1ZZK|refseq:NP_002131.2|refseq:NP_112552.1|refseq:NP_112553.1|ensembl:ENSP00000317788|ensembl:ENSP00000353552|ensembl:ENST00000376263|ensembl:ENSP00000365439|ensembl:ENST00000376281|ensembl:ENSP00000365458|refseq:NP_001305115.1|refseq:NP_001305116.1|refseq:NP_001305117.1|refseq:XP_016870157.1|refseq:XP_005252017.1|refseq:XP_005252020.1|refseq:XP_005252022.1|dip:DIP-31805N|entrezgene/locuslink:3190(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16438870(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:YZQD5JJkHPUMtZ4XUA9fQkNfXzc9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:fYS0vFFT6sY7eIA0xtMJWiVhTbM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q8N6Y0 uniprotkb:P0C7X2 intact:EBI-739895|uniprotkb:Q8NBX7|uniprotkb:Q96KH3|uniprotkb:Q9BYI8|uniprotkb:A8K7L6|uniprotkb:B2RCR9|ensembl:ENSP00000252597 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:usbp1_human(display_long)|uniprotkb:USHBP1(gene name)|psi-mi:USHBP1(display_short)|uniprotkb:MCC-2(gene name synonym)|uniprotkb:AIE-75-binding protein(gene name synonym)|uniprotkb:AIEBP(gene name synonym)|uniprotkb:MCC2(gene name synonym)|uniprotkb:Mutated in colon cancer protein 2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477257 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001284632.1|refseq:NP_114147.2|refseq:NP_001308346.1|ensembl:ENSG00000130307(gene)|ensembl:ENST00000252597(transcript)|go:"GO:0030165"(PDZ domain binding)|interpro:IPR019536|interpro:IPR040171|entrezgene/locuslink:83878(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16439859(see-also)|intact:EBI-16439869(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:vY1qx73Ju/z7WDu6k1kd10ZDVRo9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:368jHYgp+2WnbT2Vgm8V0kRse58 true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) intact:EBI-16439879 uniprotkb:P0C7X2 - intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:"ccsb orf id: 8359"(display_short)|psi-mi:EBI-16439879(display_long) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) entrezgene/locuslink:80125(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16439913(see-also)|intact:EBI-16439923(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:poddy6+Qr+z8s1U2xyFnXJ05O6Y9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:SjA8oAebTiqkQOA72Zv4uE/G3Qw true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9NYB9-2 uniprotkb:A0A0S2Z6P0 intact:EBI-11096309|ensembl:ENSP00000261017 intact:EBI-16429989 psi-mi:q9nyb9-2(display_long)|uniprotkb:ABI2(gene name)|psi-mi:ABI2(display_short)|uniprotkb:ARGBPIA(gene name synonym)|uniprotkb:Abelson interactor 2(gene name synonym)|uniprotkb:Abl-binding protein 3(gene name synonym)|uniprotkb:Arg-binding protein 1(gene name synonym) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477209 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-743598(isoform-parent)|ensembl:ENSG00000138443(gene)|ensembl:ENST00000261017(transcript)|uniprotkb:Q9NYB9-2(isoform-parent)|entrezgene/locuslink:10152(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16438726(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:VNi9aUeavD8+CCi+n1DXS+7mmbs9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:8PYvyU0aZ//Lc9FgVXGORn9LI0w true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q2TAC2-2 uniprotkb:P0C7X2 intact:EBI-10961624|ensembl:ENSP00000376154 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q2tac2-2(display_long)|uniprotkb:CCDC57(gene name)|psi-mi:CCDC57(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477323 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000176155(gene)|ensembl:ENST00000392343(transcript)|uniprotkb:Q2TAC2-2(isoform-parent)|intact:EBI-2808286(isoform-parent)|entrezgene/locuslink:284001(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16440256(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:RWcF0hgb1geIY959JUKrLK13Jx09606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:jRgMz45OsmRxhwuw0jwjsnCKgJk true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96D09 uniprotkb:P0C7X2 intact:EBI-473189|ensembl:ENSP00000339057|ensembl:ENSP00000437394|ensembl:ENSP00000437872|ensembl:ENSP00000507692|ensembl:ENSP00000508139|uniprotkb:Q8NAB4|uniprotkb:D3DXA0 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:gasp2_human(display_long)|uniprotkb:GPRASP2(gene name)|psi-mi:GPRASP2(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477291 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158301(gene)|ensembl:ENST00000332262(transcript)|ensembl:ENST00000483720(transcript)|ensembl:ENST00000486814(transcript)|ensembl:ENST00000535209(transcript)|ensembl:ENST00000543253(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0061484"(hematopoietic stem cell homeostasis)|interpro:IPR006911(Protein of unknown function DUF634)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR043374|refseq:NP_001004051.1|refseq:NP_001171803.1|refseq:NP_001171804.1|refseq:NP_001171805.1|refseq:NP_001186747.1|refseq:NP_612446.1|entrezgene/locuslink:114928(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16439984(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUbvpCvGto1y4Rqnri7qaKaygQ89606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:WcECaDS6pZZZ8+Vb9HneFem3VFI true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96KN7-4 uniprotkb:P0C7X2 intact:EBI-11525164|ensembl:ENSP00000372391 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:q96kn7-4(display_long)|uniprotkb:RPGRIP1(gene name)|psi-mi:RPGRIP1(display_short) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477339 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1050213(isoform-parent)|ensembl:ENSG00000092200(gene)|ensembl:ENST00000382933(transcript)|uniprotkb:Q96KN7-4(isoform-parent)|entrezgene/locuslink:57096(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16440378(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xy0433uM/nWhWLM/EsfESPJDIy49606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:R0V6KxExeohKy5kGOmnD7rgvHMo true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96KN7-4 uniprotkb:A0A0S2Z6P0 intact:EBI-11525164|ensembl:ENSP00000372391 intact:EBI-16429989 psi-mi:q96kn7-4(display_long)|uniprotkb:RPGRIP1(gene name)|psi-mi:RPGRIP1(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477355 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) intact:EBI-1050213(isoform-parent)|ensembl:ENSG00000092200(gene)|ensembl:ENST00000382933(transcript)|uniprotkb:Q96KN7-4(isoform-parent)|entrezgene/locuslink:57096(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16440378(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:Xy0433uM/nWhWLM/EsfESPJDIy49606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:P+kfyheVI4t6gP5Z0sGMikFjAzM true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y5V3 uniprotkb:P0C7X2 intact:EBI-716006|uniprotkb:Q5VSH6|uniprotkb:Q8IZ84|uniprotkb:Q8WY92|uniprotkb:Q9H352|uniprotkb:Q9HBT4|uniprotkb:Q9UF36|ensembl:ENSP00000325333|ensembl:ENSP00000364874|ensembl:ENSP00000364927 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:magd1_human(display_long)|uniprotkb:MAGE-D1 antigen(gene name synonym)|uniprotkb:Neurotrophin receptor-interacting MAGE homolog(gene name synonym)|uniprotkb:MAGE tumor antigen CCF(gene name synonym)|uniprotkb:MAGED1(gene name)|psi-mi:MAGED1(display_short)|uniprotkb:NRAGE(gene name synonym)|uniprotkb:PRO2292(orf name)|uniprotkb:PP2250(orf name) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477371 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005332.1|refseq:NP_001005333.1|refseq:NP_008917.3|ensembl:ENSP00000325333|ensembl:ENST00000375695|ensembl:ENSP00000364847|ensembl:ENSP00000364874|ensembl:ENSP00000364927|refseq:XP_011529137.1|refseq:XP_016885467.1|refseq:XP_016885468.1|refseq:XP_016885469.1|ensembl:ENSG00000179222(gene)|ensembl:ENST00000326587(transcript)|ensembl:ENST00000375722(transcript)|ensembl:ENST00000375772(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0090190"(positive regulation of branching involved in ureteric bud morphogenesis)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|go:"GO:2001235"(positive regulation of apoptotic signaling pathway)|interpro:IPR002190(MAGE protein)|interpro:IPR030083|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:Q9Y5V3|reactome:R-HSA-193648|reactome:R-HSA-418889|entrezgene/locuslink:9500(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16440614(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UTg0r4zGMXfTZqBN4SFmgu6IukI9606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:i0IxYizsKcOrZmpc581iL27GK2c true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q9Y5V3 uniprotkb:A0A0S2Z6P0 intact:EBI-716006|uniprotkb:Q5VSH6|uniprotkb:Q8IZ84|uniprotkb:Q8WY92|uniprotkb:Q9H352|uniprotkb:Q9HBT4|uniprotkb:Q9UF36|ensembl:ENSP00000325333|ensembl:ENSP00000364874|ensembl:ENSP00000364927 intact:EBI-16429989 psi-mi:magd1_human(display_long)|uniprotkb:MAGE-D1 antigen(gene name synonym)|uniprotkb:Neurotrophin receptor-interacting MAGE homolog(gene name synonym)|uniprotkb:MAGE tumor antigen CCF(gene name synonym)|uniprotkb:MAGED1(gene name)|psi-mi:MAGED1(display_short)|uniprotkb:NRAGE(gene name synonym)|uniprotkb:PRO2292(orf name)|uniprotkb:PP2250(orf name) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477387 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001005332.1|refseq:NP_001005333.1|refseq:NP_008917.3|ensembl:ENSP00000325333|ensembl:ENST00000375695|ensembl:ENSP00000364847|ensembl:ENSP00000364874|ensembl:ENSP00000364927|refseq:XP_011529137.1|refseq:XP_016885467.1|refseq:XP_016885468.1|refseq:XP_016885469.1|ensembl:ENSG00000179222(gene)|ensembl:ENST00000326587(transcript)|ensembl:ENST00000375722(transcript)|ensembl:ENST00000375772(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0032922"(circadian regulation of gene expression)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042752"(regulation of circadian rhythm)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043406"(positive regulation of MAP kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0050680"(negative regulation of epithelial cell proliferation)|go:"GO:0090190"(positive regulation of branching involved in ureteric bud morphogenesis)|go:"GO:1900181"(negative regulation of protein localization to nucleus)|go:"GO:2001235"(positive regulation of apoptotic signaling pathway)|interpro:IPR002190(MAGE protein)|interpro:IPR030083|interpro:IPR037445|interpro:IPR041898|interpro:IPR041899|mint:Q9Y5V3|reactome:R-HSA-193648|reactome:R-HSA-418889|entrezgene/locuslink:9500(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16440614(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:UTg0r4zGMXfTZqBN4SFmgu6IukI9606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:xi6Kz7sJEQBF9vRcrmhn9aU4QHQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q12933 uniprotkb:P0C7X2 intact:EBI-355744|uniprotkb:Q96NT2|uniprotkb:A8K107|uniprotkb:B4DPJ7|uniprotkb:Q7Z337|intact:EBI-1046651|ensembl:ENSP00000247668 intact:EBI-4395732|uniprotkb:B3KV51|uniprotkb:O75701|uniprotkb:Q8IW91|uniprotkb:Q8WV14|uniprotkb:Q96MN0|uniprotkb:A8MV39|ensembl:ENSP00000223459 psi-mi:traf2_human(display_long)|uniprotkb:TRAF2(gene name)|psi-mi:TRAF2(display_short)|uniprotkb:TRAP3(gene name synonym)|uniprotkb:Tumor necrosis factor type 2 receptor-associated protein 3(gene name synonym)|uniprotkb:E3 ubiquitin-protein ligase TRAF2(gene name synonym)|uniprotkb:RING-type E3 ubiquitin transferase TRAF2(gene name synonym) psi-mi:zn688_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477403 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_066961.2|refseq:XP_011517279.1|refseq:XP_011517280.1|refseq:XP_011517276.1|refseq:XP_011517277.1|refseq:XP_011517278.1|ensembl:ENSG00000127191(gene)|ensembl:ENST00000247668(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0002637"(regulation of immunoglobulin production)|go:"GO:0002726"(positive regulation of T cell cytokine production)|go:"GO:0002947"(tumor necrosis factor receptor superfamily complex)|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043507"(positive regulation of JUN kinase activity)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0045121"(membrane raft)|go:"GO:0046330"(positive regulation of JNK cascade)|go:"GO:0046625"(sphingolipid binding)|go:"GO:0048255"(mRNA stabilization)|go:"GO:0051091"(positive regulation of DNA-binding transcription factor activity)|go:"GO:0051092"(positive regulation of NF-kappaB transcription factor activity)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0070059"(intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress)|go:"GO:0070534"(protein K63-linked ubiquitination)|go:"GO:0071732"(cellular response to nitric oxide)|go:"GO:0097057"(TRAF2-GSTP1 complex)|go:"GO:0097300"(programmed necrotic cell death)|go:"GO:0097400"(interleukin-17-mediated signaling pathway)|go:"GO:1901215"(negative regulation of neuron death)|go:"GO:1903265"(positive regulation of tumor necrosis factor-mediated signaling pathway)|go:"GO:1903721"(positive regulation of I-kappaB phosphorylation)|go:"GO:1990604"(IRE1-TRAF2-ASK1 complex)|go:"GO:2001238"(positive regulation of extrinsic apoptotic signaling pathway)|interpro:IPR001293(Zinc finger, TRAF-type)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR002083(MATH)|interpro:IPR008974(TRAF-like)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005164"(tumor necrosis factor receptor binding)|go:"GO:0005174"(CD40 receptor binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005938"(cell cortex)|go:"GO:0007165"(signal transduction)|go:"GO:0007250"(activation of NF-kappaB-inducing kinase activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0009898"(cytoplasmic side of plasma membrane)|go:"GO:0012506"(vesicle membrane)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0019903"(protein phosphatase binding)|go:"GO:0023019"(signal transduction involved in regulation of gene expression)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031435"(mitogen-activated protein kinase kinase kinase binding)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0031996"(thioesterase binding)|go:"GO:0032743"(positive regulation of interleukin-2 production)|go:"GO:0033209"(tumor necrosis factor-mediated signaling pathway)|go:"GO:0034351"(negative regulation of glial cell apoptotic process)|go:"GO:0034622"|go:"GO:0034976"(response to endoplasmic reticulum stress)|go:"GO:0035631"(CD40 receptor complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0043120"(tumor necrosis factor binding)|go:"GO:0043122"(regulation of I-kappaB kinase/NF-kappaB signaling)|go:"GO:0043123"(positive regulation of I-kappaB kinase/NF-kappaB signaling)|interpro:IPR012227(TNF receptor-associated factor TRAF)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017907|interpro:IPR018957|interpro:IPR027133|interpro:IPR032070|interpro:IPR037305|interpro:IPR043211|mint:Q12933|rcsb pdb:1CA4|rcsb pdb:1CA9|rcsb pdb:1CZY|rcsb pdb:1CZZ|rcsb pdb:1D00|rcsb pdb:1D01|rcsb pdb:1D0A|rcsb pdb:1D0J|rcsb pdb:1F3V|rcsb pdb:1QSC|rcsb pdb:3KNV|rcsb pdb:3M06|rcsb pdb:3M0A|rcsb pdb:3M0D|reactome:R-HSA-140534|reactome:R-HSA-3371378|reactome:R-HSA-5213460|reactome:R-HSA-5218900|reactome:R-HSA-5357786|reactome:R-HSA-5357905|reactome:R-HSA-5357956|reactome:R-HSA-5668541|reactome:R-HSA-5675482|reactome:R-HSA-5676594|reactome:R-HSA-5689880|reactome:R-HSA-69416|reactome:R-HSA-75893|reactome:R-HSA-933541|reactome:R-HSA-933542|reactome:R-HSA-9693928|refseq:XP_016870584.1|dip:DIP-6223N|entrezgene/locuslink:7186(identity) refseq:NP_001019854.1|refseq:NP_660314.1|ensembl:ENSG00000229809(gene)|ensembl:ENST00000223459(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000977"(RNA polymerase II transcription regulatory region sequence-specific DNA binding)|go:"GO:0000981"(DNA-binding transcription factor activity, RNA polymerase II-specific)|go:"GO:0001227"(DNA-binding transcription repressor activity, RNA polymerase II-specific)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|interpro:IPR036051|interpro:IPR036236|reactome:R-HSA-212436|entrezgene/locuslink:146542(identity) intact:EBI-16440684(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:JhaoM5kRLh3zwhXr+BsCCRNOYa09606 rogid:ZP8beTaWW/kLZHt0j6Qu5d9Prsg9606 rigid:4QAt3KNBBXWuCCqRIrlbUHcsOCU true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification) uniprotkb:Q96D09 uniprotkb:A0A0S2Z6P0 intact:EBI-473189|ensembl:ENSP00000339057|ensembl:ENSP00000437394|ensembl:ENSP00000437872|ensembl:ENSP00000507692|ensembl:ENSP00000508139|uniprotkb:Q8NAB4|uniprotkb:D3DXA0 intact:EBI-16429989 psi-mi:gasp2_human(display_long)|uniprotkb:GPRASP2(gene name)|psi-mi:GPRASP2(display_short) psi-mi:a0a0s2z6p0_human(display_long)|uniprotkb:ZNF688(gene name)|psi-mi:ZNF688(display_short) psi-mi:"MI:0397"(two hybrid array) Yang et al. (2016) pubmed:26871637|imex:IM-25013|doi:10.1016/j.cell.2016.01.029 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-16477307 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensembl:ENSG00000158301(gene)|ensembl:ENST00000332262(transcript)|ensembl:ENST00000483720(transcript)|ensembl:ENST00000486814(transcript)|ensembl:ENST00000535209(transcript)|ensembl:ENST00000543253(transcript)|go:"GO:0001540"(amyloid-beta binding)|go:"GO:0001664"(G protein-coupled receptor binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0061484"(hematopoietic stem cell homeostasis)|interpro:IPR006911(Protein of unknown function DUF634)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR043374|refseq:NP_001004051.1|refseq:NP_001171803.1|refseq:NP_001171804.1|refseq:NP_001171805.1|refseq:NP_001186747.1|refseq:NP_612446.1|entrezgene/locuslink:114928(identity) go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR001909(Krueppel-associated box)|interpro:IPR036051|entrezgene/locuslink:146542(identity) intact:EBI-16439984(see-also) - - caution:No direct evidence for expression of this isoform is given in the publication, but overall expression of the clones in the dataset has been tested in selected random clones in figures 2B and S2A-H, with 100% success ratio.|negative:The interaction does not occur under these experimental conditions.|figure legend:Supplementary table S2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2016/02/15 2017/10/19 rogid:aUbvpCvGto1y4Rqnri7qaKaygQ89606 rogid:tJYK2TjSjpKqq8LuNRTxP0k/29s9606 rigid:my4AO1HKqtFHUmVaqCVNPLBoBIQ true - - - - psi-mi:"MI:1179"(partial nucleotide sequence identification) psi-mi:"MI:1179"(partial nucleotide sequence identification)