#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q08208 uniprotkb:P53131 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706239|imex:IM-23972-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:338F73B13DAE3282 crc64:DA8A085EC50FF430 figure legend:Fig. 2C, table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:34330EA18FD8E5D8|rigid:jOALxrNmd+kM5d2m4Dv+Q8QNU/4 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q04660 uniprotkb:P39744 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706251|imex:IM-23972-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:6542DFE4670341CA crc64:48C3B9AE076B9B8F figure legend:Fig. 2C, table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:22BC84F54803B9BB|rigid:xRt+dAiHcjbCMRgHJ9EQsAu/NaQ false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P10962 uniprotkb:P34241 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706263|imex:IM-23972-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - crc64:309ED6897EA24F73 crc64:D4EC1FA19E051367 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:9702730C3C17B442|rigid:BnGoCSAKRbf/Wk4uQqhMB908H2Q false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06511 uniprotkb:P20484 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-10930|uniprotkb:D6VXR4 psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:mak11_yeast(display_long)|uniprotkb:MAK11(gene name)|psi-mi:MAK11(display_short)|uniprotkb:Maintenance of killer protein 11(gene name synonym)|uniprotkb:YKL021C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706275|imex:IM-23972-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0016020"(membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|sgd:S000001504|refseq:NP_012904.3|dip:DIP-6516N|sgd:YKL021C(identity) - crc64:23E401BB1B82470C crc64:B3BD72C4E37ACF11 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2016/03/15 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:ajUmz1eIMUuSxd6OOELUAnzQX6w559292 intact-crc:C885A8D8A08A4822|rigid:4lryXw+1eV1uHkisH21T9HJS/44 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12389 uniprotkb:P32892 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706299|imex:IM-23972-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:0533013C276095DF crc64:60747607A6E5E4A8 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:5DD40DC7DCFFC8BF|rigid:NAA60Ge88VKpIrogaCkdb5TZmMg false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P34241 uniprotkb:P53734 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706311|imex:IM-23972-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) - crc64:D4EC1FA19E051367 - figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 intact-crc:888218851A9E01AB|rigid:K58qJHaKpSqb2rQgToCwDlMhUKs false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32892 uniprotkb:Q04660 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706287|imex:IM-23972-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:60747607A6E5E4A8 crc64:6542DFE4670341CA figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:D22940943435C3EB|rigid:dLmtioB1H6jMkj/B8Zc5yF+RVSQ false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36049 uniprotkb:P37838 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706335|imex:IM-23972-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:4A11F6CDF779DB5A crc64:61261815EA3DEE5C figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:1A3586EB226683EB|rigid:2CUP9pxefBn3T48d7UU73R8mm3k false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P34241 uniprotkb:Q04660 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706323|imex:IM-23972-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:D4EC1FA19E051367 crc64:6542DFE4670341CA figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:BE773FA15CAEBFBE|rigid:ttNXLdxI7vAC2xcS6Mm9kJByfzk false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:P36080 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706347|imex:IM-23972-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:69970294E9C980F9 crc64:BCEDE9F10A466E6E figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:1D6727BC8C6ADBF3|rigid:J6qlKvm8A8fz02w11H6TqJcqqFw false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38779 uniprotkb:P40693 intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706383|imex:IM-23972-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:13A2AFA0B927CD98 crc64:64714DDFAFB90B5D figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:66C1062FDC92B0E6|rigid:REKkjWPzVM3RcgdhHOJjwa0kenY false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12389 uniprotkb:P38112 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706371|imex:IM-23972-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:0533013C276095DF crc64:C4FF2FB5B04FFBF9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:E73A2A032D3DE88A|rigid:MWZP0OKWqX9qXWtQuI+2MH7p73I false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P39744 uniprotkb:Q04660 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706395|imex:IM-23972-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:48C3B9AE076B9B8F crc64:6542DFE4670341CA figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:B21EA523175A9C83|rigid:xRt+dAiHcjbCMRgHJ9EQsAu/NaQ false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38112 uniprotkb:Q03532 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706359|imex:IM-23972-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:886D716FC5F9A0C5|rigid:qZWyVNF6LQZEFYzgIs7+UkRJn24 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q07896 uniprotkb:P39744 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706407|imex:IM-23972-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:4CA9461A4A1F1E9E crc64:48C3B9AE076B9B8F figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:627A2485B62A0499|rigid:4aPkc+FiAhjD7m4yzoY80cM8YEk false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P39744 uniprotkb:Q12389 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706419|imex:IM-23972-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:48C3B9AE076B9B8F crc64:0533013C276095DF figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:DF3C5453280A334E|rigid:nf63nPZpcuDc3yJ3Eya2p6Bndes false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32892 uniprotkb:P40693 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706431|imex:IM-23972-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:60747607A6E5E4A8 crc64:64714DDFAFB90B5D figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:C2AA1403C134BCA7|rigid:ShSvNep3QR2JUFRkgLw8oUQ28ao false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12080 uniprotkb:P43586 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706443|imex:IM-23972-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:9B761BB0318EFFC8 crc64:69970294E9C980F9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:D483FA8AFFC3F6CA|rigid:lz4xuSffHKcgm4Dec5n/FfMGhmc false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q03532 uniprotkb:Q12389 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706491|imex:IM-23972-22 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:EE15D51A7F6BE1A2 crc64:0533013C276095DF figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:74061F8DC1698EF4|rigid:g8eSzxFL/kAT85O6KdCpR/qpztA false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53131 uniprotkb:P37838 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706455|imex:IM-23972-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:DA8A085EC50FF430 crc64:61261815EA3DEE5C figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:A40ED69640051E10|rigid:JyZ12wG60tYdqtvUSdDt+IRAbig false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q03532 uniprotkb:Q03532 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706479|imex:IM-23972-21 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:EE15D51A7F6BE1A2 crc64:EE15D51A7F6BE1A2 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:987B261A9BEE4537|rigid:9mOyJDfCTZc51dmzdHRhRzqwnZU false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P47108 uniprotkb:Q05942 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706503|imex:IM-23972-23 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) - crc64:7647D48DA557D4D4 - figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 intact-crc:186F4B5A8CE9AADE|rigid:Si8VjuxMIpHLtiDEE0KZz/Q6LlU false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53131 uniprotkb:P53927 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706467|imex:IM-23972-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:DA8A085EC50FF430 crc64:EC86E3C77C863292 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:32F51244D3A09C51|rigid:lCTBRCEXPg4UFhh3s3ZgkgVFOM0 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q07845 uniprotkb:Q12024 intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706539|imex:IM-23972-26 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) - - crc64:DBC26738651433C4 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 intact-crc:DA36608504C43B37|rigid:V+mm61+I+V54cci4JXNVQwpzm/U false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:Q08208 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706527|imex:IM-23972-25 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:69970294E9C980F9 crc64:338F73B13DAE3282 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:08D95DAA3DD9B844|rigid:yoMa1Bztq9ajcCMjpdj5p6+Fw0M false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53742 uniprotkb:Q12176 intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706551|imex:IM-23972-27 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:D7F670973B85CCEB - figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:A5C44C030AB76E32|rigid:M0zpeuN8XbfBI597qA6xPAt5SH4 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q08208 uniprotkb:P37838 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706515|imex:IM-23972-24 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:338F73B13DAE3282 crc64:61261815EA3DEE5C figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:8893FAA33AD604CB|rigid:BHti678LjyGyuAK3GUD0Nh97N/g false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q08235 uniprotkb:P36049 intact:EBI-3775|uniprotkb:D6W1Z1|ensemblfungi:YOL077C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:brx1_yeast(display_long)|uniprotkb:YOL077C(locus name)|uniprotkb:BRX1(gene name)|psi-mi:BRX1(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706611|imex:IM-23972-32 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014565.2|sgd:S000005437|dip:DIP-6317N|mint:Q08235|ensemblfungi:YOL077C(gene)|ensemblfungi:YOL077C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR026532|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YOL077C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:31466853EF0E7301 crc64:4A11F6CDF779DB5A figure legend:Table S4, fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mPR6HWKwM6RNCRE/vezsYlCmEGY559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:988637E8F5428DD1|rigid:IjgWqBz40YKdLTvgFGdmIx4pZ3c false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12389 uniprotkb:Q12389 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706587|imex:IM-23972-30 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:0533013C276095DF crc64:0533013C276095DF figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:EE6118282AA7E1BD|rigid:+hDHJXgNOxNzjsPSL647Kx+g+3o false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12389 uniprotkb:P43586 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706575|imex:IM-23972-29 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:0533013C276095DF crc64:69970294E9C980F9 figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:C80DAF7F299360EC|rigid:UuHGVp0kDy95mA6Iu4IPRqXE2Aw false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12754 uniprotkb:P37838 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706599|imex:IM-23972-31 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:92333BCD53CB095F crc64:61261815EA3DEE5C figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:EF0ABF53ACD68B6A|rigid:e0jZbhMybl0NwWRnpzCizKA8lLg false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06511 uniprotkb:Q12176 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706563|imex:IM-23972-28 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:23E401BB1B82470C - figure legend:Table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:A54BE2AF9FF4C347|rigid:WSctfg8ZJWHpIChbvzb4Ra+WtjI false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36146 uniprotkb:Q07845 intact:EBI-10053|uniprotkb:Q66R55|uniprotkb:D6VXC4|ensemblfungi:YKR063C intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W psi-mi:las1_yeast(display_long)|uniprotkb:YKR063C(locus name)|uniprotkb:LAS1(gene name)|psi-mi:LAS1(display_short) psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706623|imex:IM-23972-33 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001771|ensemblfungi:YKR063C(gene)|ensemblfungi:YKR063C_mRNA(transcript)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0090730"(Las1 complex)|interpro:IPR007174(Las1-like)|refseq:NP_012989.3|dip:DIP-6398N|reactome:R-SCE-6791226|sgd:YKR063C(identity) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) - crc64:B69F14A3DE211FB8 - figure legend:Table S4, fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QWLtqIfkFyn/6NGS132UJsbxIr8559292 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 intact-crc:CC06717919641B35|rigid:VBbDeusyTBFWEWKT0KS0NUqskBU false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12024 uniprotkb:Q04660 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706647|imex:IM-23972-35 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:DBC26738651433C4 crc64:6542DFE4670341CA figure legend:Table S4, fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:F671DFC406A9456C|rigid:mzxacRUpVgazbTG3bUBy4C4OJxg false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06218 uniprotkb:P10962 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706659|imex:IM-23972-36 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:CCE8E0AF8B4071D7 crc64:309ED6897EA24F73 figure legend:Table S4, fig. 2C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:6EECC0B72E8E2553|rigid:ZwO4oOVFJoxbJ23BN4R3Ir0UZM8 false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25582 uniprotkb:Q12080 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706671|imex:IM-23972-37 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:D7A080299B0C7E24 crc64:9B761BB0318EFFC8 figure legend:Table S4, fig. 2C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:74C69CBBE406BE64|rigid:T9Mmf3KYrSoT9SS0K7exL5IRR44 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q06511 uniprotkb:Q12153 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706635|imex:IM-23972-34 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) - crc64:23E401BB1B82470C crc64:83306767C4F58816 figure legend:Table S4, fig. 2B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 intact-crc:D83C1133EF4B2E04|rigid:/7b2yl2me+r7sJjeOSbisYeLgtk false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36049 uniprotkb:Q12389 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706683|imex:IM-23972-38 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:4A11F6CDF779DB5A crc64:0533013C276095DF figure legend:Table S4, fig. 2C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:540591F7F500E37A|rigid:dE9jDpptLSO1LqIpIwdcExk4gI4 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38112 uniprotkb:P38805 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706695|imex:IM-23972-39 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:C4FF2FB5B04FFBF9 crc64:EC6EDB2FCE252D4A figure legend:Table S4, fig. 2C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:11CC9BC6F3E9946D|rigid:HxbtGrD5DwGZejthXewX/L1A0x8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P25582 uniprotkb:P43586 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706707|imex:IM-23972-40 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:D7A080299B0C7E24 crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:1C1373459E5FDED4|rigid:5h4qi2/e4G0l64gLoEoBO/RaxS8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:P38112 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706743|imex:IM-23972-43 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:69970294E9C980F9 crc64:C4FF2FB5B04FFBF9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:0A5F781E769BF4D4|rigid:2qBQ7uwj4m2C4Sk9wYsXYAALR4g false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:P36049 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706731|imex:IM-23972-42 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:69970294E9C980F9 crc64:4A11F6CDF779DB5A figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:708CC0FF69EB3472|rigid:vz/dP5wngEefUWWeW88OIvZp0CI false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32892 uniprotkb:P43586 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706719|imex:IM-23972-41 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:60747607A6E5E4A8 crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:6568934766A7EE21|rigid:Sf0w+DCDNTpqyqbRyzLIgvOoPQ8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38911 uniprotkb:P43586 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706755|imex:IM-23972-44 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:A01D24DE0078FE11 crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:DEDE8E6BCF163AC0|rigid:QbMo1jM56MeqGnmo5vKOQvznbUQ false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:P43586 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706779|imex:IM-23972-46 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:69970294E9C980F9 crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:C1F4AA60A865D46D|rigid:Juk5VDiYyg6lAx/5cZE3847qPCE false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:Q03532 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706803|imex:IM-23972-48 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:69970294E9C980F9 crc64:EE15D51A7F6BE1A2 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:B980C6CEA72EFC0F|rigid:YAJ8LiOEHO5c8vCrgW2+3WMw70s false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P53131 uniprotkb:P43586 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706791|imex:IM-23972-47 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:DA8A085EC50FF430 crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:E517FB6D2D0BC04F|rigid:Nsiw5wrvQmGVWOkdiutbb/U+H3Q false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P39744 uniprotkb:P43586 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706767|imex:IM-23972-45 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:48C3B9AE076B9B8F crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:D98D8CB886E3B4C7|rigid:It1Pz+JU2zdRV+KPtiTvvVTXa54 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P37838 uniprotkb:P38112 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706875|imex:IM-23972-54 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:61261815EA3DEE5C crc64:C4FF2FB5B04FFBF9 figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:DE738BABD242C0CF|rigid:iXQY4duTsIMfgN+2ULxJBWJuIms false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P37838 uniprotkb:P37838 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706863|imex:IM-23972-53 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:61261815EA3DEE5C crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:5C933CEF67D74E2E|rigid:GGyTD9M5echsMuDZxZE7AL6KW0o false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:Q12176 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706815|imex:IM-23972-49 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:69970294E9C980F9 - figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:5CEB6A0EB0107B12|rigid:OHoPW7i5pb2ed/ItBhutCNGXgVY false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12754 uniprotkb:P43586 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706827|imex:IM-23972-50 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:92333BCD53CB095F crc64:69970294E9C980F9 figure legend:Table S4, fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:10FF130CBC16A4EE|rigid:prLFw/rE+9rzv7b8MeZVu/nQ54g false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38779 uniprotkb:P37838 intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706887|imex:IM-23972-55 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:13A2AFA0B927CD98 crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:5F63DEF6568E85CD|rigid://ZC/7Kw5m8ObHbmKG8u/2WnHaA false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36080 uniprotkb:P37838 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706851|imex:IM-23972-52 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:BCEDE9F10A466E6E crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:B201871F84FE1443|rigid:ZcQdHb7N7W1kIZelYIUT0EC0c9Q false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32892 uniprotkb:P37838 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706839|imex:IM-23972-51 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:60747607A6E5E4A8 crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:CE75F19C3197CCE5|rigid:PrIsMS7ogQe2WREDHbBmvc+DHpM false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P39744 uniprotkb:P37838 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706899|imex:IM-23972-56 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:48C3B9AE076B9B8F crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:1D71C450A3C1F887|rigid:hO11weJovTH+MvnecY5jP+jT3q8 false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P37838 uniprotkb:Q03532 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706923|imex:IM-23972-58 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:61261815EA3DEE5C crc64:EE15D51A7F6BE1A2 figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:58A8B663A0CB0CF6|rigid:AKL5Qx7tk8yBRXuLMqfa/1LV3QI false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P43586 uniprotkb:P37838 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706911|imex:IM-23972-57 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:69970294E9C980F9 crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:B27044119BD7518F|rigid:X55pAX1QvTNkcx8sZ9fTFEQsnjo false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P37838 uniprotkb:Q12176 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706935|imex:IM-23972-59 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:61261815EA3DEE5C - figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:5B132D9F7978371E|rigid:PRthYeU9q1eyCsrsUgX1R+jUmjo false ha tag:n-n flag tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q12389 uniprotkb:P37838 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706947|imex:IM-23972-60 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:0533013C276095DF crc64:61261815EA3DEE5C figure legend:Table S4, fig. 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:CEB8CEFFD9316419|rigid:4INPUK8FVGkJfnA9YFTO70wTJzc false flag tag:n-n ha tag:n-n - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P36080 uniprotkb:P43586 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706979|imex:IM-23972-63 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:BCEDE9F10A466E6E crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:F10BBAC3EAE98C19|rigid:J6qlKvm8A8fz02w11H6TqJcqqFw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P36080 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706970|imex:IM-23972-62 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:4A11F6CDF779DB5A crc64:BCEDE9F10A466E6E figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:15E9D1AF96C6D25C|rigid:hCphdCf2e2lU9ksx5uySH3RAlo4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P25808 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-17819|uniprotkb:D6VTM9|ensemblfungi:YFL002C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:spb4_yeast(display_long)|uniprotkb:SPB4(gene name)|psi-mi:SPB4(display_short)|uniprotkb:Suppressor of PAB1 protein 4(gene name synonym)|uniprotkb:YFL002C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706961|imex:IM-23972-61 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_116654.1|sgd:S000001894|ensemblfungi:YFL002C(gene)|ensemblfungi:YFL002C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|mint:P25808|dip:DIP-5423N|sgd:YFL002C(identity) - crc64:4A11F6CDF779DB5A crc64:B2EC8B8B5E34AA10 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:/YeCW4PWN4ZjpxPPi+R95c+81U0559292 intact-crc:08E7CC1FC804754A|rigid:MTLH8U3s8LX3RVSFD8q96+XVNUc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P40078 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707042|imex:IM-23972-70 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:4A11F6CDF779DB5A crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:97FA69958B10E6DF|rigid:+b0rpLOvF5AegRC7lhkMP3yX3K8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40010 uniprotkb:P43586 intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707033|imex:IM-23972-69 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:F75E4860D114756A crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:0ED7E8EEAA7D4398|rigid:+GmH9AMVCfp1pZYfLr0XU9pCQ8g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40010 uniprotkb:P36049 intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707024|imex:IM-23972-68 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:F75E4860D114756A crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:2F1AD9A9795036E6|rigid:x97qIi+CvjepO+dnpq6tC6wtKd4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08287 uniprotkb:P39744 intact:EBI-12135|uniprotkb:D6W1S5|ensemblfungi:YOL144W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:nop8_yeast(display_long)|uniprotkb:YOL144W(locus name)|uniprotkb:Nucleolar protein 8(gene name synonym)|uniprotkb:NOP8(gene name)|psi-mi:NOP8(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707015|imex:IM-23972-67 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034138|interpro:IPR035979|ensemblfungi:YOL144W(gene)|ensemblfungi:YOL144W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|refseq:NP_014497.1|sgd:S000005504|dip:DIP-4206N|mint:Q08287|sgd:YOL144W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - - crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PR7N6gE4Il6ofUCopWK8ztDDVFo559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:4F5550C1CD9F7E26|rigid:IS0+2RocHfTwnlLxUqZ2iqv2nfg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P38911 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707006|imex:IM-23972-66 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:BCEDE9F10A466E6E crc64:A01D24DE0078FE11 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:5FFB9AA863D7BE11|rigid:ON4CXt6Uv+1WY1iHr8vzDSo0zLg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:Q08208 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706997|imex:IM-23972-65 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:C74AEB0FDC8E4C4B|rigid:Iui/KUGgB1/pgreTW2rhR8VkvmI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36120 uniprotkb:P43586 intact:EBI-5629|uniprotkb:D6VX89|ensemblfungi:YKR024C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:dbp7_yeast(display_long)|uniprotkb:YKR024C(locus name)|uniprotkb:DBP7(gene name)|psi-mi:DBP7(display_short)|uniprotkb:DEAD box protein 7(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10706988|imex:IM-23972-64 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012949.1|sgd:S000001732|dip:DIP-1833N|mint:P36120|ensemblfungi:YKR024C(gene)|ensemblfungi:YKR024C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|sgd:YKR024C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:A7E25BC16AE09A0B crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WUW9Kewy2qZDmm61bzPIHxXo0dA559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:2A7DBC22F6B0A6F8|rigid:k9mvtsqUZKTznMMvulSy5vvP13g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P43586 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707096|imex:IM-23972-76 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:640324779AE4D716 crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:42218721D0544586|rigid:nvo4SiOkap2q5G78N6Drw//pnno false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q02892 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707087|imex:IM-23972-75 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - crc64:64714DDFAFB90B5D crc64:640324779AE4D716 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:86333C545B68CE53|rigid:TKUwpp93nH0Uyy84BPWO5cTHBbM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P37838 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707078|imex:IM-23972-74 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:640324779AE4D716 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:BA3341830DF3FCAE|rigid:rN2ZRXHbQWetEYML0UzA6xcBI1Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P43586 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707069|imex:IM-23972-73 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - - crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:4C75105ACB92D3FD|rigid:Qpw+C0Xwdpkk02wSAJpWs7fFDcw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12024 uniprotkb:P47108 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707060|imex:IM-23972-72 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - crc64:DBC26738651433C4 crc64:7647D48DA557D4D4 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:C6D0754157D6B6C4|rigid:9OaWKr/zqCxDOYgyPSdLeidcJxI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47108 uniprotkb:P25582 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707051|imex:IM-23972-71 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:7647D48DA557D4D4 crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:4179AFE310625373|rigid:fMorpLDUyZqcUJt4FKg1HiqGiWQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P34241 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707159|imex:IM-23972-83 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:E739509F6F1F0438|rigid:rrH/Ew/vHHYO3VCr93AEiCchE6Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q08687 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707150|imex:IM-23972-82 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) - crc64:69970294E9C980F9 crc64:8C7C0FF4AD6F5ABA figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 intact-crc:BBDC5E5CCF5A23BE|rigid:HGqx55f2w122EGSCdkQQ8Jr5pZo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q07896 uniprotkb:P36049 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707141|imex:IM-23972-81 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:4CA9461A4A1F1E9E crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:9C645C9B9975F0F3|rigid:sxrIN1nsNKyidR7PHuNzgd2Nh3A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q06205 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707132|imex:IM-23972-80 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:9B761BB0318EFFC8 crc64:CF90C6714F04572E figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:7222A7EB4FEF7F0D|rigid:A3UAKX8231gGvwbPXK98AcwuXdQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06205 uniprotkb:Q08208 intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707123|imex:IM-23972-79 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:CF90C6714F04572E crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:F670850A7C5F7263|rigid:Mm19rOSWVe3YXMVcPkinndemFGY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53742 uniprotkb:Q04660 intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707114|imex:IM-23972-78 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:D7F670973B85CCEB crc64:6542DFE4670341CA figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:AF5B0B29B55A3A6A|rigid:btxpiS/0+QReRYi3K23DUWxtqa8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P53742 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707105|imex:IM-23972-77 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - crc64:EE15D51A7F6BE1A2 crc64:D7F670973B85CCEB figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:4FE43A7F92CD4E07|rigid:LJdBOUMdHWKC0c1M1p1cT2RN0zw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47108 uniprotkb:P38805 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707213|imex:IM-23972-89 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:7647D48DA557D4D4 crc64:EC6EDB2FCE252D4A figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:861E8CECFD808CDF|rigid:/xk8W1exFkTHzkGvvb2rbZuGLIs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:P40010 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707204|imex:IM-23972-88 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) - crc64:4ACE390E6B1700EA crc64:F75E4860D114756A figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 intact-crc:ECC66919C760C91A|rigid:XQgZeWR2jForcCHF4W+Lq4wEjIc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P36160 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707195|imex:IM-23972-87 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:640324779AE4D716 crc64:4ACE390E6B1700EA figure legend:Table S2|author-confidence:0.55|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:C8F0BEC3B478985D|rigid:n7+qkyinEl54PvNA3u40B3eAmB4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P53742 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707186|imex:IM-23972-86 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - crc64:48C3B9AE076B9B8F crc64:D7F670973B85CCEB figure legend:Table S2|author-confidence:0.55|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:0F6C774E9457C724|rigid:dvMn45r18/XKfUyoW5Ylh7nxQ8U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P38112 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707177|imex:IM-23972-85 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:EC6EDB2FCE252D4A crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.55|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:5E4753A8F957F85B|rigid:HxbtGrD5DwGZejthXewX/L1A0x8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q12754 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707168|imex:IM-23972-84 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:64714DDFAFB90B5D crc64:92333BCD53CB095F figure legend:Table S2|author-confidence:0.53|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:0E3144D5A1008D4E|rigid:hNUJwwHlMrO2aGmBu3lD2Vdu6rg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q03862 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-31385|uniprotkb:D6VS88|ensemblfungi:YDR101C psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:arx1_yeast(display_long)|uniprotkb:Associated with ribosomal export complex protein 1(gene name synonym)|uniprotkb:ARX1(gene name)|psi-mi:ARX1(display_short)|uniprotkb:YD8557.10c(orf name)|uniprotkb:YDR101C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707260|imex:IM-23972-94 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_010386.1|sgd:S000002508|dip:DIP-5819N|mint:Q03862|ensemblfungi:YDR101C(gene)|ensemblfungi:YDR101C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0046872"(metal ion binding)|interpro:IPR000994(Peptidase M24, catalytic core)|interpro:IPR036005|interpro:IPR036388|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:4V8T|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5JCS|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6RZZ|rcsb pdb:6YLG|rcsb pdb:6YLH|reactome:R-SCE-6798695|sgd:YDR101C(identity) - crc64:9B761BB0318EFFC8 crc64:E68A7896FAFA6A0C figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:td4xQ4tAQGk4eK1saQr7x3whlqs559292 intact-crc:80A9420F15D797B3|rigid:r7CmcBvsbiuW2lIu116INJ3SsT0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P53927 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707249|imex:IM-23972-93 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:EE15D51A7F6BE1A2 crc64:EC86E3C77C863292 figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:AEA684DA1F63816F|rigid:9DfV9j7mjpw53APBZzQAqEsQHEk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:Q08746 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707240|imex:IM-23972-92 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) - - crc64:7DFF6C51DDD2ADD6 figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 intact-crc:9808FB9310F2B3BA|rigid:mxuIlIo/1Af02xmcgqYu9XxEtew false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P53742 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707231|imex:IM-23972-91 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - - crc64:D7F670973B85CCEB figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:5BA7340CF879A5AD|rigid:VcEhMSGwv+AeKixbXFoq5XlfHh4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P53188 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707222|imex:IM-23972-90 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - - - figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:A57652413F70725F|rigid:uAef9Mlh0HTvUf4JLczxtSQhcDc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P36049 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707332|imex:IM-23972-102 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:D7A080299B0C7E24 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:07E5CCD78D92F3E0|rigid:0j4CMg3WJei0Npvwb5ARVEh50Uk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P32892 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707323|imex:IM-23972-101 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:0533013C276095DF crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:8BC2AD5A237656A9|rigid:NAA60Ge88VKpIrogaCkdb5TZmMg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q02892 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707314|imex:IM-23972-100 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - - crc64:640324779AE4D716 figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:2663935AA57AE461|rigid:JCGdlvibemnxbE5njQuxFodoLZw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P37838 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707305|imex:IM-23972-99 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - - crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:B694B4F06428A389|rigid:PRthYeU9q1eyCsrsUgX1R+jUmjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:Q03532 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707296|imex:IM-23972-98 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:0533013C276095DF crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:0702A5FAFDBAE916|rigid:g8eSzxFL/kAT85O6KdCpR/qpztA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P37838 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707287|imex:IM-23972-97 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:69970294E9C980F9 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:7603EB7FAAEC6E72|rigid:X55pAX1QvTNkcx8sZ9fTFEQsnjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25382 uniprotkb:P40078 intact:EBI-21980|uniprotkb:Q8NKJ4|uniprotkb:D6VR74|ensemblfungi:YCR072C intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:nle1_yeast(display_long)|uniprotkb:RSA4(gene name)|psi-mi:RSA4(display_short)|uniprotkb:Notchless protein homolog 1(gene name synonym)|uniprotkb:Ribosome biogenesis factor RSA4(gene name synonym)|uniprotkb:YCR72C(orf name)|uniprotkb:YCR072C(locus name) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707278|imex:IM-23972-96 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009997.2|sgd:S000000668|dip:DIP-5365N|ensemblfungi:YCR072C(gene)|ensemblfungi:YCR072C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:4WJU|rcsb pdb:4WJV|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLF|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|reactome:R-SCE-983168|mint:P25382|sgd:YCR072C(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:04451B0C38FB5318 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.61|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:j3sfwkJbcWZXmn3nee3XTZwxu/4559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:7F0F9DB0FC89AF54|rigid:+xr4dl+gMi2xcGnX/0SjeFFKqcU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P36160 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707269|imex:IM-23972-95 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - - crc64:4ACE390E6B1700EA figure legend:Table S2|author-confidence:0.6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:9A5D1A3024379679|rigid:+7LyQIzgQ8FMY9cCIF36hzQSpQo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:P25582 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707395|imex:IM-23972-109 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:A01D24DE0078FE11 crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:946B648EEA036827|rigid:l6QqgYEWEjoBaC5heSjmh2WgmHM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P38789 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-18160|uniprotkb:D3DL15|ensemblfungi:YHR066W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:ssf1_yeast(display_long)|uniprotkb:YHR066W(locus name)|uniprotkb:SSF1(gene name)|psi-mi:SSF1(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707386|imex:IM-23972-108 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_011933.1|sgd:S000001108|ensemblfungi:YHR066W(gene)|ensemblfungi:YHR066W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008361"(regulation of cell size)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|rcsb pdb:6C0F|dip:DIP-6501N|mint:P38789|sgd:YHR066W(identity) - crc64:4A11F6CDF779DB5A crc64:6F0344993BEF2217 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:yGSNhWjddgUIG0ef17sZ0ZifF3U559292 intact-crc:7E333214FCCAE59D|rigid:MN5ip1AngxQajhDARv+znIg6lKI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P37838 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707377|imex:IM-23972-107 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:60747607A6E5E4A8 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:FF3E30F0D70D0D6D|rigid:PrIsMS7ogQe2WREDHbBmvc+DHpM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25808 uniprotkb:P37838 intact:EBI-17819|uniprotkb:D6VTM9|ensemblfungi:YFL002C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:spb4_yeast(display_long)|uniprotkb:SPB4(gene name)|psi-mi:SPB4(display_short)|uniprotkb:Suppressor of PAB1 protein 4(gene name synonym)|uniprotkb:YFL002C(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707368|imex:IM-23972-106 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116654.1|sgd:S000001894|ensemblfungi:YFL002C(gene)|ensemblfungi:YFL002C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|mint:P25808|dip:DIP-5423N|sgd:YFL002C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:B2EC8B8B5E34AA10 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:/YeCW4PWN4ZjpxPPi+R95c+81U0559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:62E70E67DE3848EF|rigid:/AykIoojRh0B6NEyG0lIGaLxrgc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q08208 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707359|imex:IM-23972-105 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:D7A080299B0C7E24 crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:F1ADC83116A1AB32|rigid:nkZRNbpGYLZcuJ6sW4rYSxDYKoA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P25582 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707350|imex:IM-23972-104 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:69970294E9C980F9 crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:F22AF8FAEC019F70|rigid:5h4qi2/e4G0l64gLoEoBO/RaxS8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P36080 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707341|imex:IM-23972-103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:D7A080299B0C7E24 crc64:BCEDE9F10A466E6E figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:577916F38AC0A92D|rigid:RmtIRgI7RWrpK0od0oH8eSw/nJU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P53131 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707467|imex:IM-23972-117 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:61261815EA3DEE5C crc64:DA8A085EC50FF430 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:E8215C125C9B4108|rigid:JyZ12wG60tYdqtvUSdDt+IRAbig false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P53131 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707458|imex:IM-23972-116 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:4A11F6CDF779DB5A crc64:DA8A085EC50FF430 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:13A0929DD0291CF1|rigid:M+X1/I5RO8G8QEHXUmAkmro2mDE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P40693 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707449|imex:IM-23972-115 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:64714DDFAFB90B5D crc64:64714DDFAFB90B5D figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:9A5962AA53831022|rigid:hIMijY0LjMIHKeySqaXFOYNpbm4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P40010 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707440|imex:IM-23972-114 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) - crc64:61261815EA3DEE5C crc64:F75E4860D114756A figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 intact-crc:87DB07AADC610AFF|rigid:SgaldcZbY7nVH5CRcyzalp6cLuc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P40007 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707431|imex:IM-23972-113 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) - crc64:61261815EA3DEE5C crc64:B1D27F0B817AADED figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 intact-crc:97CC961D33774467|rigid:mGH+kQ/UrlEosVjyl3KAND+2wrA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P40007 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707422|imex:IM-23972-112 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) - crc64:4A11F6CDF779DB5A crc64:B1D27F0B817AADED figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 intact-crc:C3581976AE8FC318|rigid:8xAqzqUcsBqooqqjzuKfuldw29Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q08208 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707413|imex:IM-23972-111 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:48C3B9AE076B9B8F crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:3D5407C7E37111BD|rigid:RE9zHn5BjQEQjxDVX1L259mJ1Ic false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P38911 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707404|imex:IM-23972-110 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:0533013C276095DF crc64:A01D24DE0078FE11 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:DA83526DFCB01261|rigid:u7ZVlhvBJBWvvvK1oEqiSqGwmMA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q08687 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707512|imex:IM-23972-122 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) - crc64:61261815EA3DEE5C crc64:8C7C0FF4AD6F5ABA figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 intact-crc:0CB996B3500CE8EA|rigid:x5xmyit7cG9s8NT4oldQU2AboYM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08687 uniprotkb:P36049 intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707503|imex:IM-23972-121 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:8C7C0FF4AD6F5ABA crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:B2B8BAF9CA384E99|rigid:b4pW36McssgN5wx6bsGmm8coRu4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q06205 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707494|imex:IM-23972-120 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:D7A080299B0C7E24 crc64:CF90C6714F04572E figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:E4B17C1E188FB3C7|rigid:ZnSuOMz86SuNnuRZQf/EXp5YAGI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:Q12389 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707485|imex:IM-23972-119 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:640324779AE4D716 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:6CF3E2A4C6D6B165|rigid:0AzKzrYFOlLvcm04OmtgLW2va4M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P43586 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707476|imex:IM-23972-118 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:DA8A085EC50FF430 crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:70D6FA6E0A1D9A28|rigid:Nsiw5wrvQmGVWOkdiutbb/U+H3Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:Q12389 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707557|imex:IM-23972-127 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:338F73B13DAE3282 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:52612FF75FE1D1DF|rigid:SvL+y2jN2hDDi/D2LMMG0iQL3Q4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P37838 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707548|imex:IM-23972-126 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:0533013C276095DF crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:B4826704047D1077|rigid:4INPUK8FVGkJfnA9YFTO70wTJzc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P36080 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707539|imex:IM-23972-125 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:0533013C276095DF crc64:BCEDE9F10A466E6E figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:DEB95BE10AFBAC99|rigid:wWEadwo3liS4c8FJUss39LiUuZQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q12176 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707530|imex:IM-23972-124 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:9B761BB0318EFFC8 - figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:08F4D986AEB0CC2F|rigid:gF/Klya+pIY1HZBUsV8b8fbeVQE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P43586 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707521|imex:IM-23972-123 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - - crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.63|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:B9BCEE5470B87784|rigid:OHoPW7i5pb2ed/ItBhutCNGXgVY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:Q04660 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707629|imex:IM-23972-135 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:60747607A6E5E4A8 crc64:6542DFE4670341CA figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:A336CE1550DD947C|rigid:dLmtioB1H6jMkj/B8Zc5yF+RVSQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q03532 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707620|imex:IM-23972-134 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:EE15D51A7F6BE1A2 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:2A15F8B807DC01BC|rigid:9mOyJDfCTZc51dmzdHRhRzqwnZU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P43586 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707611|imex:IM-23972-133 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:4A11F6CDF779DB5A crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:345590546C47BE6A|rigid:vz/dP5wngEefUWWeW88OIvZp0CI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P40078 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707602|imex:IM-23972-132 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - - crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:A698A9ADB672E579|rigid:zHWgnP3BQMSRLVhO4ZnDN0EvOjA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P37838 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707593|imex:IM-23972-131 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - - crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:DE3A19DDE4660661|rigid:PRthYeU9q1eyCsrsUgX1R+jUmjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12522 uniprotkb:Q12522 intact:EBI-9046|ensemblfungi:YPR016C|uniprotkb:D6W426 intact:EBI-9046|ensemblfungi:YPR016C|uniprotkb:D6W426 psi-mi:if6_yeast(display_long)|uniprotkb:TIF6(gene name)|psi-mi:TIF6(display_short)|uniprotkb:CDC95(gene name synonym)|uniprotkb:YPR016C(locus name)|uniprotkb:LPZ15C(orf name) psi-mi:if6_yeast(display_long)|uniprotkb:TIF6(gene name)|psi-mi:TIF6(display_short)|uniprotkb:CDC95(gene name synonym)|uniprotkb:YPR016C(locus name)|uniprotkb:LPZ15C(orf name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707584|imex:IM-23972-130 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6EM1|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6YLG|ensemblfungi:YPR016C(gene)|ensemblfungi:YPR016C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043022"(ribosome binding)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002769(Translation initiation factor IF6)|rcsb pdb:1G62|rcsb pdb:2X7N|rcsb pdb:3J2I|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5H4P|rcsb pdb:5JCS|rcsb pdb:5T62|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:7BTB|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:6ELZ|refseq:NP_015341.1|sgd:S000006220|mint:Q12522|dip:DIP-5395N|sgd:YPR016C(identity) rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6EM1|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6YLG|ensemblfungi:YPR016C(gene)|ensemblfungi:YPR016C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043022"(ribosome binding)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002769(Translation initiation factor IF6)|rcsb pdb:1G62|rcsb pdb:2X7N|rcsb pdb:3J2I|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5H4P|rcsb pdb:5JCS|rcsb pdb:5T62|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:7BTB|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:6ELZ|refseq:NP_015341.1|sgd:S000006220|mint:Q12522|dip:DIP-5395N|sgd:YPR016C(identity) - crc64:1BCE041C61DFD2A8 crc64:1BCE041C61DFD2A8 figure legend:Table S2|author-confidence:0.65|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FI24/9LOZsCJEfbb7pjCQ+C8i/U559292 rogid:FI24/9LOZsCJEfbb7pjCQ+C8i/U559292 intact-crc:5B52A753E1DEFC82|rigid:UhBhXQB39tNRRHEp0YSeZmd1U4Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12754 uniprotkb:P36049 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707575|imex:IM-23972-129 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:92333BCD53CB095F crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.64|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:51F350C5CA7B99EE|rigid:pwi45J88SouS3G/dYnB89i2FoKk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36146 uniprotkb:Q07845 intact:EBI-10053|uniprotkb:Q66R55|uniprotkb:D6VXC4|ensemblfungi:YKR063C intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W psi-mi:las1_yeast(display_long)|uniprotkb:YKR063C(locus name)|uniprotkb:LAS1(gene name)|psi-mi:LAS1(display_short) psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707566|imex:IM-23972-128 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001771|ensemblfungi:YKR063C(gene)|ensemblfungi:YKR063C_mRNA(transcript)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0090730"(Las1 complex)|interpro:IPR007174(Las1-like)|refseq:NP_012989.3|dip:DIP-6398N|reactome:R-SCE-6791226|sgd:YKR063C(identity) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) - crc64:B69F14A3DE211FB8 - figure legend:Table S2|author-confidence:0.64|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QWLtqIfkFyn/6NGS132UJsbxIr8559292 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 intact-crc:ED080E014A845A2F|rigid:VBbDeusyTBFWEWKT0KS0NUqskBU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q06511 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707692|imex:IM-23972-142 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - - crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:C43903495AB78728|rigid:WSctfg8ZJWHpIChbvzb4Ra+WtjI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05022 uniprotkb:Q12176 intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707683|imex:IM-23972-141 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022|sgd:YMR229C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:39BF46E5587B3B0A - figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:C93C2E9B97E1D79D|rigid:ScY5Qu06tK+aQBk9RNDfa1gdhsk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:P25582 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707674|imex:IM-23972-140 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:9B761BB0318EFFC8 crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:053544B32F999284|rigid:T9Mmf3KYrSoT9SS0K7exL5IRR44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:Q08208 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707665|imex:IM-23972-139 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:338F73B13DAE3282 crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:51C403FDC194129A|rigid:e1jQpPjZbG221wIGZ4ly0RorCPM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06511 uniprotkb:Q06511 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707656|imex:IM-23972-138 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:23E401BB1B82470C crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:4EB2EFB3F7DEA736|rigid:zaz+MxEmb/8970RWErBN6N/6T/4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06218 uniprotkb:P36049 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707647|imex:IM-23972-137 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:CCE8E0AF8B4071D7 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:DC9CA0CCCDDC76FD|rigid:24ll/tyqXWx6WD5W7Mv5nLlge8w false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:Q04660 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707638|imex:IM-23972-136 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:D4EC1FA19E051367 crc64:6542DFE4670341CA figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:701B01B4D4D43C67|rigid:ttNXLdxI7vAC2xcS6Mm9kJByfzk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P27476 uniprotkb:P37838 intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707746|imex:IM-23972-148 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|sgd:YGR159C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:90DEEE7BBC20BC0C crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:66E8C6927EF464E9|rigid:dQeddKwYLFODb9b1BuR5Xr96Neg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:Q06218 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707737|imex:IM-23972-147 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) - crc64:309ED6897EA24F73 crc64:CCE8E0AF8B4071D7 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 intact-crc:B748A98523B186EE|rigid:ZwO4oOVFJoxbJ23BN4R3Ir0UZM8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:P10962 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707728|imex:IM-23972-146 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:D4EC1FA19E051367 crc64:309ED6897EA24F73 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:5819D567B3751D9A|rigid:BnGoCSAKRbf/Wk4uQqhMB908H2Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q08208 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707719|imex:IM-23972-145 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:4A11F6CDF779DB5A crc64:338F73B13DAE3282 figure legend:Table S2|author-confidence:0.69|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:5C38E8725FB1ABE1|rigid:L0KTg9brIUh/8OtqNevUvCxevoY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P36049 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707710|imex:IM-23972-144 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:61261815EA3DEE5C crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.69|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:692FBA52386AAC94|rigid:2CUP9pxefBn3T48d7UU73R8mm3k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q12389 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707701|imex:IM-23972-143 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:EE15D51A7F6BE1A2 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.68|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:A12247E5B0AAFD66|rigid:g8eSzxFL/kAT85O6KdCpR/qpztA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P37838 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707791|imex:IM-23972-153 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:BCEDE9F10A466E6E crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:44F3CAFE7BAF1351|rigid:ZcQdHb7N7W1kIZelYIUT0EC0c9Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:Q12176 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707782|imex:IM-23972-152 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:60747607A6E5E4A8 - figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:920F520E9B87D4A3|rigid:B+tCbRo9aRCRphDLDY5GyFKgnWs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P32892 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707773|imex:IM-23972-151 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:338F73B13DAE3282 crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:657B2FC1B23B06F6|rigid:PgduFrgCvLVJVttCSQ7ldofjjHQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P36049 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707764|imex:IM-23972-150 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:60747607A6E5E4A8 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:55C4DABDC8854349|rigid:jexNBPQlwzU+NdMfD2enejoWn60 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P27476 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707755|imex:IM-23972-149 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|sgd:YGR159C(identity) - crc64:69970294E9C980F9 crc64:90DEEE7BBC20BC0C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:A1E19CD96C46911E|rigid:EgRq2OItVEMFzWI7VvxXq3EsMRU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P40078 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707854|imex:IM-23972-160 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:48C3B9AE076B9B8F crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:5E02FEE2367C7BA7|rigid:cGuZLwgNlK8OQzFDgPua4dLyroQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P39744 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707845|imex:IM-23972-159 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:61261815EA3DEE5C crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:351FA05F6884EF75|rigid:hO11weJovTH+MvnecY5jP+jT3q8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P38911 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707836|imex:IM-23972-158 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:4A11F6CDF779DB5A crc64:A01D24DE0078FE11 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:16A1E32A81718B45|rigid:4Mwp1bLuqU4+BqA6Bw50oE3q1/A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38779 uniprotkb:P37838 intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707827|imex:IM-23972-157 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:13A2AFA0B927CD98 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:4414675FBA2CDB97|rigid://ZC/7Kw5m8ObHbmKG8u/2WnHaA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P38112 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707818|imex:IM-23972-156 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:EE15D51A7F6BE1A2 crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:D190151795A430EF|rigid:qZWyVNF6LQZEFYzgIs7+UkRJn24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:P40078 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707809|imex:IM-23972-155 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:A148FEFCE7B26F69|rigid:T8GomUb4HUqssfZwSQSQS524zaY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P38112 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707800|imex:IM-23972-154 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:4A11F6CDF779DB5A crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:709F2FF340628D9A|rigid:KyZNCisRL/BsvML6CxkBvFw4SIc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q03532 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707926|imex:IM-23972-168 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:61261815EA3DEE5C crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:D02E57432D39AFA4|rigid:AKL5Qx7tk8yBRXuLMqfa/1LV3QI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P36049 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707917|imex:IM-23972-167 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:EE15D51A7F6BE1A2 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:D5548E620C5E5996|rigid:X6yQp1LR/zZMRDuNIpifI/6UlL8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53883 uniprotkb:P37838 intact:EBI-29032|uniprotkb:D6W110|ensemblfungi:YNL175C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop13_yeast(display_long)|uniprotkb:NOP13(gene name)|psi-mi:NOP13(display_short)|uniprotkb:N1665(orf name)|uniprotkb:YNL175C(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707908|imex:IM-23972-166 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014224.2|sgd:S000005119|dip:DIP-4331N|mint:P53883|ensemblfungi:YNL175C(gene)|ensemblfungi:YNL175C_mRNA(transcript)|go:"GO:0001731"(formation of translation preinitiation complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030684"(preribosome)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034057"(RNA strand-exchange activity)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0097010"(eukaryotic translation initiation factor 4F complex assembly)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034225|interpro:IPR034226|interpro:IPR035979|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-72662|reactome:R-SCE-72702|sgd:YNL175C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:FB1A0FB46B13C201 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:13Kj/Exmk8m6xKw1rbat8NkPius559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:B05CFE20069F6062|rigid:k0Ue/BguMR60x+RJe+x2Y0Fi7Cs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P53188 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707899|imex:IM-23972-165 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - crc64:61261815EA3DEE5C - figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:6E2C06B7719E9445|rigid:Pkb+PG1Qk1L994pYe7krS35iLf0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53188 uniprotkb:P36049 intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707890|imex:IM-23972-164 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - - crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:E4DC71DDFDB43BA6|rigid:BYVuPqV1HIoE6vHr0F1Q0S1tCGE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P40078 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707881|imex:IM-23972-163 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:DA8A085EC50FF430 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:AA04A4E4CC25B2BC|rigid:ITq6Dx+HfOfFGyPdaE+tMoT92M0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P40078 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707872|imex:IM-23972-162 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:69970294E9C980F9 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:A1793EC91ED644B1|rigid:fL/8ZYc93R+CZaCG+TA3bhcX4u4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q03532 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707863|imex:IM-23972-161 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:48C3B9AE076B9B8F crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:6CB98F1751EC6778|rigid:lXZavqljqqThd0ya6S9OaiFN6so false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12754 uniprotkb:Q12176 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707980|imex:IM-23972-174 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:92333BCD53CB095F - figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:6A507F230EFAAFEB|rigid:8poyWGrhiDCiliG2FUSI0CBPoyA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q12754 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707971|imex:IM-23972-173 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:69970294E9C980F9 crc64:92333BCD53CB095F figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:8227C1AB27A3DBB5|rigid:prLFw/rE+9rzv7b8MeZVu/nQ54g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:Q12754 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707962|imex:IM-23972-172 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:545C8B4250BCB0C9 crc64:92333BCD53CB095F figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:245183A1C64A200D|rigid:GWX9cMXTUmaCXgnKw9Bu7FgvO3M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12754 uniprotkb:P37838 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707953|imex:IM-23972-171 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:92333BCD53CB095F crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:0DED267396D2CECD|rigid:e0jZbhMybl0NwWRnpzCizKA8lLg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q12153 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707944|imex:IM-23972-170 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) - crc64:4A11F6CDF779DB5A crc64:83306767C4F58816 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 intact-crc:8577B517DC0C096F|rigid:5KS65EEUfak0K6BIGAjGJAb7LkU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:Q03532 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707935|imex:IM-23972-169 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:545C8B4250BCB0C9 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:D790CC5E59280C49|rigid:rQfjrfoZuILlk8GXlHVx4n04fjI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P40078 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708052|imex:IM-23972-182 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:60747607A6E5E4A8 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:E0A07FAEADD01ABC|rigid:gobiw/C77q9EQRc++vLUEkusSBc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P43586 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708043|imex:IM-23972-181 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:338F73B13DAE3282 crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.72|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:E5E6D17DF6AAA7EB|rigid:yoMa1Bztq9ajcCMjpdj5p6+Fw0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:Q03532 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708034|imex:IM-23972-180 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:6542DFE4670341CA crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.72|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:2A4D94A0917D6179|rigid:CF+WOf8msXubRw+x7i7JLowkZOo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06205 uniprotkb:P43586 intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708025|imex:IM-23972-179 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:CF90C6714F04572E crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.71|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:C9339ECA0C7092D4|rigid:/ZxSIC4bxrpICNxQxfRXQVVA3hg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06205 uniprotkb:P36049 intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708016|imex:IM-23972-178 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:CF90C6714F04572E crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.71|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:94D30A426544B719|rigid:yv3an7LkpXPC4hukGh3PHoaa9I4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P40078 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708007|imex:IM-23972-177 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:640324779AE4D716 crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.71|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:A0E9629BE52C80F2|rigid:6G5PIRTG3M0gvMkMr+rdXHXckHU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P53188 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707998|imex:IM-23972-176 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - crc64:69970294E9C980F9 - figure legend:Table S2|author-confidence:0.71|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:D78EF5737E41DA53|rigid:DIoWr8ZGsQTlchpNnOug/dWhXwM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53188 uniprotkb:P40078 intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10707989|imex:IM-23972-175 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - - crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.71|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:0986B0EBD9642D6A|rigid:HhqQugEkJvLUFll7gUInSCMo+Ck false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q12176 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708106|imex:IM-23972-188 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:EE15D51A7F6BE1A2 - figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:37FD4952A7A36C73|rigid:vvBIMIW2KRuYtZNYyNIsGGFbAt0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P40693 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708097|imex:IM-23972-187 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - - crc64:64714DDFAFB90B5D figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:16C3611C555E67E9|rigid:Gt8OLlPydrxa/0S6RMZXKW6Mra0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08746 uniprotkb:P39744 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708088|imex:IM-23972-186 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:7DFF6C51DDD2ADD6 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:C4D37B1C038684B0|rigid:6tn3zkkgTgpkaUABgQ+9x9N+5Qo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:Q12080 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708079|imex:IM-23972-185 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:A01D24DE0078FE11 crc64:9B761BB0318EFFC8 figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:FDC91ADBA7A0F094|rigid:wnpIOS865k8bk8PtDnHRwj2PRoE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P38911 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708070|imex:IM-23972-184 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:69970294E9C980F9 crc64:A01D24DE0078FE11 figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:11816051851A28C4|rigid:QbMo1jM56MeqGnmo5vKOQvznbUQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P32892 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708061|imex:IM-23972-183 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:69970294E9C980F9 crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:34D3933D94C3FAF5|rigid:Sf0w+DCDNTpqyqbRyzLIgvOoPQ8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P38779 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708160|imex:IM-23972-194 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) - crc64:64714DDFAFB90B5D crc64:13A2AFA0B927CD98 figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 intact-crc:0A93607C86FA74C6|rigid:REKkjWPzVM3RcgdhHOJjwa0kenY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P32892 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708151|imex:IM-23972-193 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:0533013C276095DF crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:9B79EF8C40CD4DBF|rigid:NAA60Ge88VKpIrogaCkdb5TZmMg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q12389 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708142|imex:IM-23972-192 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:D7A080299B0C7E24 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:7CF9DC883F6B6BBB|rigid:ju5JVQFNMjU0FNKutgPuEDGsUm8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q12754 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708133|imex:IM-23972-191 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:9B761BB0318EFFC8 crc64:92333BCD53CB095F figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:E91DE8CD5F0BCB47|rigid:z2w6t7d2eefiADqY9k9S6hkXXCw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P53742 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708124|imex:IM-23972-190 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - - crc64:D7F670973B85CCEB figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:7D3DD94D107B143F|rigid:M0zpeuN8XbfBI597qA6xPAt5SH4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:Q07896 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708115|imex:IM-23972-189 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) - crc64:309ED6897EA24F73 crc64:4CA9461A4A1F1E9E figure legend:Table S2|author-confidence:0.77|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 intact-crc:C4002C02BB4FCED9|rigid:wnw8/wBHIYp9uVYhoHNFmwxuJCM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:Q12389 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708232|imex:IM-23972-202 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:0533013C276095DF crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:2C59AB136D9AF4D5|rigid:+hDHJXgNOxNzjsPSL647Kx+g+3o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q12389 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708223|imex:IM-23972-201 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:4A11F6CDF779DB5A crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:B7D767A9D9E33C84|rigid:dE9jDpptLSO1LqIpIwdcExk4gI4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:Q12176 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708214|imex:IM-23972-200 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:0533013C276095DF - figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:E75C49FFA6930031|rigid:rFVeHf6RQ51r7GSIQnBvvyFerVw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q07896 uniprotkb:P39744 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708205|imex:IM-23972-199 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:4CA9461A4A1F1E9E crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:D0545657B99711EA|rigid:4aPkc+FiAhjD7m4yzoY80cM8YEk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:P53261 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708196|imex:IM-23972-198 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226|sgd:YGR103W(identity) - crc64:6542DFE4670341CA crc64:131001C956787BE5 figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 intact-crc:1DDBA709B49FBDCE|rigid:H4WFEStIt7nf8D3NhLVT7SaRya0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P39744 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708187|imex:IM-23972-197 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:69970294E9C980F9 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:839945494AB76F53|rigid:It1Pz+JU2zdRV+KPtiTvvVTXa54 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P36049 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708178|imex:IM-23972-196 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:48C3B9AE076B9B8F crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:0E65EB8FD3542495|rigid:1g/qiRfXAaZ765aIicpq371uUdY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P39744 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708169|imex:IM-23972-195 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:D7A080299B0C7E24 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.78|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:BB6C01F8100D08B1|rigid:pxdRHN5hGvvscsp8NySssjPdCzg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:P25582 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708286|imex:IM-23972-208 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:4ACE390E6B1700EA crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:7D545CE70D38A597|rigid:96NB4pLRI0KHmtbh6nfstPXCopk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20484 uniprotkb:Q06511 intact:EBI-10930|uniprotkb:D6VXR4 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:mak11_yeast(display_long)|uniprotkb:MAK11(gene name)|psi-mi:MAK11(display_short)|uniprotkb:Maintenance of killer protein 11(gene name synonym)|uniprotkb:YKL021C(locus name) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708277|imex:IM-23972-207 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0016020"(membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|sgd:S000001504|refseq:NP_012904.3|dip:DIP-6516N|sgd:YKL021C(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:B3BD72C4E37ACF11 crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2016/03/15 rogid:ajUmz1eIMUuSxd6OOELUAnzQX6w559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:FFF828146C921681|rigid:4lryXw+1eV1uHkisH21T9HJS/44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q12176 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708268|imex:IM-23972-206 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:48C3B9AE076B9B8F - figure legend:Table S2|author-confidence:0.79|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:210ED0187B93A844|rigid:0+ZJyhGZjF090eDo3EQUivh53Ps false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:Q02892 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708259|imex:IM-23972-205 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - crc64:640324779AE4D716 crc64:640324779AE4D716 figure legend:Table S2|author-confidence:0.79|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:EF11CB55309E70F3|rigid:zgRTo6s7C7ZshmAZJmW5g6kq7jw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P39744 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708250|imex:IM-23972-204 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:48C3B9AE076B9B8F crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.79|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:3C2A2C84BFBF4CC4|rigid:DdoZ0RMAMIN6tfHbyQl4Us030D0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P10962 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708241|imex:IM-23972-203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:64714DDFAFB90B5D crc64:309ED6897EA24F73 figure legend:Table S2|author-confidence:0.79|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:167EBBD2A7761224|rigid:xgDm6tnDNMWK0DEcvfnV0spoc7A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:P39744 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708340|imex:IM-23972-214 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:4ACE390E6B1700EA crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:0BE24D480D219B03|rigid:3f3VoieZW4xZPNQm7lMEnvQ3W9Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P39744 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708331|imex:IM-23972-213 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:BCEDE9F10A466E6E crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:F19FBB2F0A5B957B|rigid:2LcnOW8s38HqxD2TIN9MNnPuje4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P32892 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708322|imex:IM-23972-212 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:48C3B9AE076B9B8F crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:FFB8209EF4E9AEB3|rigid:vcUgB0/p5Dqf0iDDh/fnuE0GjjQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:P43586 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708313|imex:IM-23972-211 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:C4FF2FB5B04FFBF9 crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:FC0B6A046DAD5AFD|rigid:2qBQ7uwj4m2C4Sk9wYsXYAALR4g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P38112 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708304|imex:IM-23972-210 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:64714DDFAFB90B5D crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:068DEF0356D32D8B|rigid:s5SyX0yQZDfIBkfepwTmsr4/7wk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P38112 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708295|imex:IM-23972-209 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:61261815EA3DEE5C crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:E8E7D09EB7E6B248|rigid:iXQY4duTsIMfgN+2ULxJBWJuIms false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P53131 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708394|imex:IM-23972-220 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:EC86E3C77C863292 crc64:DA8A085EC50FF430 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:B45C312BA66A167A|rigid:lCTBRCEXPg4UFhh3s3ZgkgVFOM0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P40693 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708385|imex:IM-23972-219 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:DA8A085EC50FF430 crc64:64714DDFAFB90B5D figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:BE45DBB89987C30B|rigid:j1afpF8ic+tohzro7vdVwyULaAg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P53927 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708376|imex:IM-23972-218 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:545C8B4250BCB0C9 crc64:EC86E3C77C863292 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:0F68B7D368F62AE3|rigid:FPnvTpPZe2vIOW2/jInfzl8SXOU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:P39744 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708367|imex:IM-23972-217 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:9B761BB0318EFFC8 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:8731603AFE9D623A|rigid:Q5HHJ1ZpVQltLvVKpKrpQou5VOg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:P39744 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708358|imex:IM-23972-216 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:6542DFE4670341CA crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:CAEF6D5F18725C62|rigid:xRt+dAiHcjbCMRgHJ9EQsAu/NaQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P53927 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708349|imex:IM-23972-215 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:48C3B9AE076B9B8F crc64:EC86E3C77C863292 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:CA2F1E624ED95D74|rigid:KHAXXdrnXmYyr7+L3acKm2DLins false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P25582 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708448|imex:IM-23972-226 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:D7A080299B0C7E24 crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:BBC4BEC57229102D|rigid:iybbq0MLk2tLg3a3n7UJtY976Ts false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08746 uniprotkb:Q12176 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708439|imex:IM-23972-225 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:7DFF6C51DDD2ADD6 - figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:D93F8AE9960BF981|rigid:Mn/N5HYiUUd+j3OWecrPPn2yZFk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q12080 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708430|imex:IM-23972-224 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:4A11F6CDF779DB5A crc64:9B761BB0318EFFC8 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:3C3F3017144460F1|rigid:0tcSy/4X5hRSB7sAw/dIUvpLIDY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q03532 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708421|imex:IM-23972-223 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:69970294E9C980F9 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:C614861F6799B8A1|rigid:YAJ8LiOEHO5c8vCrgW2+3WMw70s false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q03532 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708412|imex:IM-23972-222 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:64714DDFAFB90B5D crc64:EE15D51A7F6BE1A2 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:B5FAE7660E4F9A26|rigid:5GI/83IGhuUBBJFaQxMZ8D4IJxE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P34241 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708403|imex:IM-23972-221 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.84|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:F7480F350CEE7AE9|rigid:K58qJHaKpSqb2rQgToCwDlMhUKs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:Q12389 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708502|imex:IM-23972-232 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:C4FF2FB5B04FFBF9 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:A03F100468FE24E3|rigid:MWZP0OKWqX9qXWtQuI+2MH7p73I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P37838 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708493|imex:IM-23972-231 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:4A11F6CDF779DB5A crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:3E47D7DEADFCD55A|rigid:2CUP9pxefBn3T48d7UU73R8mm3k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P35178 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-16002|uniprotkb:D6VS74|ensemblfungi:YDR087C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:rrp1_yeast(display_long)|uniprotkb:RRP1(gene name)|psi-mi:RRP1(display_short)|uniprotkb:D4478(orf name)|uniprotkb:YDR087C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708484|imex:IM-23972-230 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) sgd:S000002494|interpro:IPR010301(Nucleolar, Nop52)|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YDR087C(gene)|ensemblfungi:YDR087C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|refseq:NP_010372.3|dip:DIP-4622N|mint:P35178|sgd:YDR087C(identity) - crc64:48C3B9AE076B9B8F crc64:7E906A028ADAE8A6 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:e7JQmwcQSik+AnzD1MH8KUpNGb4559292 intact-crc:E1E43ED029E4AE7D|rigid:RWTNQmkLrVqn6O8fGvX1xXnlwt8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47108 uniprotkb:P34241 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708475|imex:IM-23972-229 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - crc64:7647D48DA557D4D4 crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:4F9C948B8F04D0ED|rigid:PmDF7kXvtlolGJ2yPb6tNMTvb0Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P32892 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708466|imex:IM-23972-228 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:64714DDFAFB90B5D crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:3A86B88DF1D66B3C|rigid:ShSvNep3QR2JUFRkgLw8oUQ28ao false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P32892 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708457|imex:IM-23972-227 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:60747607A6E5E4A8 crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:39F06A9E07AB6C50|rigid:PZMsE2tqks13e8Yr6QTHxogRX1o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08287 uniprotkb:P34241 intact:EBI-12135|uniprotkb:D6W1S5|ensemblfungi:YOL144W intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:nop8_yeast(display_long)|uniprotkb:YOL144W(locus name)|uniprotkb:Nucleolar protein 8(gene name synonym)|uniprotkb:NOP8(gene name)|psi-mi:NOP8(display_short) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708565|imex:IM-23972-239 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034138|interpro:IPR035979|ensemblfungi:YOL144W(gene)|ensemblfungi:YOL144W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|refseq:NP_014497.1|sgd:S000005504|dip:DIP-4206N|mint:Q08287|sgd:YOL144W(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PR7N6gE4Il6ofUCopWK8ztDDVFo559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:7809B37FAEA183DD|rigid:Oed2f4Mj+/I9jBFas47Yn4MOVFk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P37838 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708556|imex:IM-23972-238 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:338F73B13DAE3282 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:7A158CB8046E6A1A|rigid:BHti678LjyGyuAK3GUD0Nh97N/g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q07896 uniprotkb:P25582 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708547|imex:IM-23972-237 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:4CA9461A4A1F1E9E crc64:D7A080299B0C7E24 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:E3FEA2E227088C8A|rigid:+t138eC+iVCxnVCo3zvqjDoXNlM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q06511 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708538|imex:IM-23972-236 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - - crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:1FF653EB8B83659D|rigid:WSctfg8ZJWHpIChbvzb4Ra+WtjI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05022 uniprotkb:Q12176 intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708529|imex:IM-23972-235 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022|sgd:YMR229C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:39BF46E5587B3B0A - figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:C1B049B707E09A66|rigid:ScY5Qu06tK+aQBk9RNDfa1gdhsk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P43586 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708520|imex:IM-23972-234 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:69970294E9C980F9 crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:8BE1D9401F9A7E6E|rigid:Juk5VDiYyg6lAx/5cZE3847qPCE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P40078 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708511|imex:IM-23972-233 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:61261815EA3DEE5C crc64:545C8B4250BCB0C9 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:0AE3BB522E8A0E5D|rigid:5ekZ+wgDlnCvXpYVIOh6OuUXLhA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:Q12389 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708619|imex:IM-23972-245 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:6542DFE4670341CA crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:8B83D0B456DA0473|rigid:k4jD96qWCHOV2JgXl4NoGKXTutE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q12389 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708610|imex:IM-23972-244 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:69970294E9C980F9 crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:45E5EF401ACEF321|rigid:UuHGVp0kDy95mA6Iu4IPRqXE2Aw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P39744 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708601|imex:IM-23972-243 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:0533013C276095DF crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:D98E318941A55807|rigid:nf63nPZpcuDc3yJ3Eya2p6Bndes false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q12176 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708592|imex:IM-23972-242 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - - - figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:5C65CFD2FB4C9E6E|rigid:n0lqgjd1JeIK9/Egos44TlbjCp4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:Q12176 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708583|imex:IM-23972-241 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:EC6EDB2FCE252D4A - figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:613BE30A3DCC7352|rigid:G/QJzwRWA508EdxTS20f72MYx7I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q12080 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708574|imex:IM-23972-240 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:69970294E9C980F9 crc64:9B761BB0318EFFC8 figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:4FABAFF953F7CA99|rigid:lz4xuSffHKcgm4Dec5n/FfMGhmc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P38112 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708682|imex:IM-23972-252 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:48C3B9AE076B9B8F crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:7FB5D83A487B29B1|rigid:kdNhkrX2853kYcxCZdars5UokbI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P37838 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708673|imex:IM-23972-251 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:69970294E9C980F9 crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:AC942260187FE0CA|rigid:X55pAX1QvTNkcx8sZ9fTFEQsnjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P37838 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708664|imex:IM-23972-250 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:61261815EA3DEE5C crc64:61261815EA3DEE5C figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:CC01365FC66DC153|rigid:GGyTD9M5echsMuDZxZE7AL6KW0o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P36049 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708655|imex:IM-23972-249 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:4A11F6CDF779DB5A crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:508EDF09CD7556B1|rigid:y7aUCIbxvzzSJ/p4oR4ZhYydUak false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q12176 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708646|imex:IM-23972-248 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:D7A080299B0C7E24 - figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:61B09A4D45AA0868|rigid:FH6ftONPnHwmY9VywGfNdKpwL68 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P36049 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708637|imex:IM-23972-247 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:69970294E9C980F9 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:0.88|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:67826C38A7D10BC2|rigid:vz/dP5wngEefUWWeW88OIvZp0CI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q12389 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708628|imex:IM-23972-246 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - - crc64:0533013C276095DF figure legend:Table S2|author-confidence:0.85|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:BF66FC51E9DB50D6|rigid:rFVeHf6RQ51r7GSIQnBvvyFerVw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:P38805 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708745|imex:IM-23972-259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:309ED6897EA24F73 crc64:EC6EDB2FCE252D4A figure legend:Table S2|author-confidence:0.94|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:D3592612486A6D35|rigid:SHDzq20P0kU+sFWMfhLf+D2o+yY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:Q12176 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708736|imex:IM-23972-258 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:640324779AE4D716 - figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:CAE3F66E34439F57|rigid:JCGdlvibemnxbE5njQuxFodoLZw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P36080 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708727|imex:IM-23972-257 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - - crc64:BCEDE9F10A466E6E figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:2FEABFAC35C3AB8B|rigid:WMYn5RJAH2uHeWYlic8kdtd4ZSQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40007 uniprotkb:Q12176 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708718|imex:IM-23972-256 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:B1D27F0B817AADED - figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:A98EDC05964FD1A0|rigid:xc2AFCnv0lGD+r8E0keReGLpPW8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40007 uniprotkb:P43586 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708709|imex:IM-23972-255 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:B1D27F0B817AADED crc64:69970294E9C980F9 figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:0F9C056C766C5A32|rigid:TWKlwJrB5CtwetGWuA82e/CUdc8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P39744 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708700|imex:IM-23972-254 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:0533013C276095DF crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:996C44209458049B|rigid:nf63nPZpcuDc3yJ3Eya2p6Bndes false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q07896 uniprotkb:P39744 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708691|imex:IM-23972-253 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:4CA9461A4A1F1E9E crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.92|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:9C8E58E1DE5F1595|rigid:4aPkc+FiAhjD7m4yzoY80cM8YEk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:P34241 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708799|imex:IM-23972-265 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - crc64:D4EC1FA19E051367 crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:36D563113499408A|rigid:zodmpOBbrVVLy29pFCppe6YqZpQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:P32892 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708790|imex:IM-23972-264 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:6542DFE4670341CA crc64:60747607A6E5E4A8 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:8D6F589C58891FF6|rigid:dLmtioB1H6jMkj/B8Zc5yF+RVSQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q07896 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708781|imex:IM-23972-263 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) - crc64:D7A080299B0C7E24 crc64:4CA9461A4A1F1E9E figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 intact-crc:06C4D266B9F57A76|rigid:+t138eC+iVCxnVCo3zvqjDoXNlM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P38805 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708772|imex:IM-23972-262 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:D7A080299B0C7E24 crc64:EC6EDB2FCE252D4A figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:48E39DB6DF51DB47|rigid:GUF4665Wc2zFoel/RISVWJAgb24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:P39744 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708763|imex:IM-23972-261 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:309ED6897EA24F73 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:29F8466675FED256|rigid:R7NY9QEPwE06IRGr3RgacR7BgwU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P10962 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708754|imex:IM-23972-260 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:EC6EDB2FCE252D4A crc64:309ED6897EA24F73 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:A9A71612E1956F06|rigid:SHDzq20P0kU+sFWMfhLf+D2o+yY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:P47108 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708862|imex:IM-23972-272 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - crc64:D4EC1FA19E051367 crc64:7647D48DA557D4D4 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:A688EE6359F7580E|rigid:PmDF7kXvtlolGJ2yPb6tNMTvb0Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P39744 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708853|imex:IM-23972-271 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:64714DDFAFB90B5D crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:AA945525CFE89935|rigid:GDTGD6S79/dWzGM2oz2PwahFgFc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P39744 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708844|imex:IM-23972-270 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:EC6EDB2FCE252D4A crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:7B21E0C90A762C42|rigid:oaW7nEzIK9geFziG9GVoHh+MLWg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P35178 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-16002|uniprotkb:D6VS74|ensemblfungi:YDR087C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:rrp1_yeast(display_long)|uniprotkb:RRP1(gene name)|psi-mi:RRP1(display_short)|uniprotkb:D4478(orf name)|uniprotkb:YDR087C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708835|imex:IM-23972-269 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) sgd:S000002494|interpro:IPR010301(Nucleolar, Nop52)|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YDR087C(gene)|ensemblfungi:YDR087C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|refseq:NP_010372.3|dip:DIP-4622N|mint:P35178|sgd:YDR087C(identity) - crc64:48C3B9AE076B9B8F crc64:7E906A028ADAE8A6 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:e7JQmwcQSik+AnzD1MH8KUpNGb4559292 intact-crc:2B138C5AF886F616|rigid:RWTNQmkLrVqn6O8fGvX1xXnlwt8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:P39744 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708826|imex:IM-23972-268 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:309ED6897EA24F73 crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:D52DFBE6D8A32D71|rigid:R7NY9QEPwE06IRGr3RgacR7BgwU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P36080 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708817|imex:IM-23972-267 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:BCEDE9F10A466E6E crc64:BCEDE9F10A466E6E figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:3B1F4340669CC057|rigid:OIzfePvuHmC39K73I9j/opU08uA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05942 uniprotkb:P34241 intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708808|imex:IM-23972-266 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:3FA00EBB31B5D877|rigid:7w3Fud8WrCb65iGAB6ee5jDCk8o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38789 uniprotkb:Q06511 intact:EBI-18160|uniprotkb:D3DL15|ensemblfungi:YHR066W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:ssf1_yeast(display_long)|uniprotkb:YHR066W(locus name)|uniprotkb:SSF1(gene name)|psi-mi:SSF1(display_short) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708925|imex:IM-23972-279 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011933.1|sgd:S000001108|ensemblfungi:YHR066W(gene)|ensemblfungi:YHR066W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008361"(regulation of cell size)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|rcsb pdb:6C0F|dip:DIP-6501N|mint:P38789|sgd:YHR066W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:6F0344993BEF2217 crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:yGSNhWjddgUIG0ef17sZ0ZifF3U559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:4E61B4E7423C79AC|rigid:UW2bkXFd6ubGl3/Po/TWiTtK6C0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08746 uniprotkb:P36160 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708916|imex:IM-23972-278 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:7DFF6C51DDD2ADD6 crc64:4ACE390E6B1700EA figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:58068757F9AAC1E9|rigid:6Leb+0Sxw8lXSbwkWGTV6eVsk1U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q12176 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708907|imex:IM-23972-277 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:64714DDFAFB90B5D - figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:B7CA7D53D5E45315|rigid:wgHVy31vG5s9YV3QnJc4TY9MVgw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:Q06218 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708898|imex:IM-23972-276 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) - crc64:309ED6897EA24F73 crc64:CCE8E0AF8B4071D7 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 intact-crc:310BBA71041CD822|rigid:ZwO4oOVFJoxbJ23BN4R3Ir0UZM8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05942 uniprotkb:P47108 intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708889|imex:IM-23972-275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - - crc64:7647D48DA557D4D4 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:23374D888FBF1209|rigid:Si8VjuxMIpHLtiDEE0KZz/Q6LlU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05942 uniprotkb:P34241 intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708880|imex:IM-23972-274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:D1B254EC250B5263|rigid:7w3Fud8WrCb65iGAB6ee5jDCk8o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47108 uniprotkb:Q05942 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708871|imex:IM-23972-273 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) - crc64:7647D48DA557D4D4 - figure legend:Table S2|author-confidence:0.99|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 intact-crc:2B0CE99D8BB079BB|rigid:Si8VjuxMIpHLtiDEE0KZz/Q6LlU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38789 uniprotkb:Q06511 intact:EBI-18160|uniprotkb:D3DL15|ensemblfungi:YHR066W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:ssf1_yeast(display_long)|uniprotkb:YHR066W(locus name)|uniprotkb:SSF1(gene name)|psi-mi:SSF1(display_short) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708979|imex:IM-23972-285 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011933.1|sgd:S000001108|ensemblfungi:YHR066W(gene)|ensemblfungi:YHR066W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008361"(regulation of cell size)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|rcsb pdb:6C0F|dip:DIP-6501N|mint:P38789|sgd:YHR066W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:6F0344993BEF2217 crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:yGSNhWjddgUIG0ef17sZ0ZifF3U559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:C20174B45B17363D|rigid:UW2bkXFd6ubGl3/Po/TWiTtK6C0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12024 uniprotkb:Q04660 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708970|imex:IM-23972-284 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:DBC26738651433C4 crc64:6542DFE4670341CA figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:38BCF003BBE83C42|rigid:mzxacRUpVgazbTG3bUBy4C4OJxg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P53927 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708961|imex:IM-23972-283 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:EC86E3C77C863292 crc64:EC86E3C77C863292 figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:894F44F308D0B1DB|rigid:+W2SToF//sQFqtjm/iRHx84lUBU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P47108 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708952|imex:IM-23972-282 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - - crc64:7647D48DA557D4D4 figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:B6AB0A28684BFAED|rigid:CC+nNNimoJv+GkUnXviCHzJ1o7k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P47108 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708943|imex:IM-23972-281 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - - crc64:7647D48DA557D4D4 figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:EF9B77FA1990A33E|rigid:CC+nNNimoJv+GkUnXviCHzJ1o7k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P39744 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708934|imex:IM-23972-280 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - - crc64:48C3B9AE076B9B8F figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:9FD418C2EF887D81|rigid:0+ZJyhGZjF090eDo3EQUivh53Ps false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12024 uniprotkb:Q04660 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709024|imex:IM-23972-290 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:DBC26738651433C4 crc64:6542DFE4670341CA figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:A2BC8CF29084606C|rigid:mzxacRUpVgazbTG3bUBy4C4OJxg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:Q08746 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709015|imex:IM-23972-289 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) - crc64:4ACE390E6B1700EA crc64:7DFF6C51DDD2ADD6 figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 intact-crc:E682862CA3E7D725|rigid:6Leb+0Sxw8lXSbwkWGTV6eVsk1U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08235 uniprotkb:P36049 intact:EBI-3775|uniprotkb:D6W1Z1|ensemblfungi:YOL077C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:brx1_yeast(display_long)|uniprotkb:YOL077C(locus name)|uniprotkb:BRX1(gene name)|psi-mi:BRX1(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709006|imex:IM-23972-288 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014565.2|sgd:S000005437|dip:DIP-6317N|mint:Q08235|ensemblfungi:YOL077C(gene)|ensemblfungi:YOL077C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR026532|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YOL077C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:31466853EF0E7301 crc64:4A11F6CDF779DB5A figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mPR6HWKwM6RNCRE/vezsYlCmEGY559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:DDC1AB31BACB214F|rigid:IjgWqBz40YKdLTvgFGdmIx4pZ3c false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36146 uniprotkb:Q07845 intact:EBI-10053|uniprotkb:Q66R55|uniprotkb:D6VXC4|ensemblfungi:YKR063C intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W psi-mi:las1_yeast(display_long)|uniprotkb:YKR063C(locus name)|uniprotkb:LAS1(gene name)|psi-mi:LAS1(display_short) psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708997|imex:IM-23972-287 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001771|ensemblfungi:YKR063C(gene)|ensemblfungi:YKR063C_mRNA(transcript)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0090730"(Las1 complex)|interpro:IPR007174(Las1-like)|refseq:NP_012989.3|dip:DIP-6398N|reactome:R-SCE-6791226|sgd:YKR063C(identity) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) - crc64:B69F14A3DE211FB8 - figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QWLtqIfkFyn/6NGS132UJsbxIr8559292 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 intact-crc:8F75E37163B608F7|rigid:VBbDeusyTBFWEWKT0KS0NUqskBU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12153 uniprotkb:Q06511 intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10708988|imex:IM-23972-286 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:83306767C4F58816 crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:DF235E7EE12F082E|rigid:/7b2yl2me+r7sJjeOSbisYeLgtk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12153 uniprotkb:Q06511 intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709042|imex:IM-23972-292 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:83306767C4F58816 crc64:23E401BB1B82470C figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:50D98BCBFDA71B45|rigid:/7b2yl2me+r7sJjeOSbisYeLgtk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q12080 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:0397"(two hybrid array) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709033|imex:IM-23972-291 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:9B761BB0318EFFC8 crc64:9B761BB0318EFFC8 figure legend:Table S2|author-confidence:1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:796C3691D2C84A30|rigid:9Tks2UY2hxZTsxRM3nseg3HWgxM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36146 uniprotkb:Q07845 intact:EBI-10053|uniprotkb:Q66R55|uniprotkb:D6VXC4|ensemblfungi:YKR063C intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W psi-mi:las1_yeast(display_long)|uniprotkb:YKR063C(locus name)|uniprotkb:LAS1(gene name)|psi-mi:LAS1(display_short) psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-10709062|imex:IM-23972-293 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001771|ensemblfungi:YKR063C(gene)|ensemblfungi:YKR063C_mRNA(transcript)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0090730"(Las1 complex)|interpro:IPR007174(Las1-like)|refseq:NP_012989.3|dip:DIP-6398N|reactome:R-SCE-6791226|sgd:YKR063C(identity) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) - crc64:B69F14A3DE211FB8 - figure legend:4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QWLtqIfkFyn/6NGS132UJsbxIr8559292 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 rigid:VBbDeusyTBFWEWKT0KS0NUqskBU false flag tag:c-c myc tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q05022 uniprotkb:Q12176 intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:0029"(cosedimentation through density gradient) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-10709074|imex:IM-23972-294 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022|sgd:YMR229C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:39BF46E5587B3B0A - figure legend:4B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rigid:ScY5Qu06tK+aQBk9RNDfa1gdhsk false calmodulin binding peptide plus protein a tag:c-c flag tag:c-c - - psi-mi:"MI:0980"(tag visualisation by enzyme assay) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q04660 uniprotkb:P53261 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-10709086|imex:IM-23972-295 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226|sgd:YGR103W(identity) - crc64:6542DFE4670341CA crc64:131001C956787BE5 figure legend:4C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rigid:IoMzXw34Wa39mnoW9LC2Ebkg5J0 false flag tag:c-c flag tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q04660 uniprotkb:Q12024 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:"MI:0029"(cosedimentation through density gradient) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-10709086|imex:IM-23972-295 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) - crc64:6542DFE4670341CA crc64:DBC26738651433C4 figure legend:4C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rigid:IoMzXw34Wa39mnoW9LC2Ebkg5J0 false flag tag:c-c calmodulin binding peptide plus protein a tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0980"(tag visualisation by enzyme assay) uniprotkb:P10962 uniprotkb:P34241 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709135|imex:IM-23972-296 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - crc64:309ED6897EA24F73 crc64:D4EC1FA19E051367 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:9587FF6A78B01AA8|rigid:BnGoCSAKRbf/Wk4uQqhMB908H2Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:P38805 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709143|imex:IM-23972-297 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:309ED6897EA24F73 crc64:EC6EDB2FCE252D4A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:EC21E1FF8E090F5D|rigid:SHDzq20P0kU+sFWMfhLf+D2o+yY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P25582 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709199|imex:IM-23972-304 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:D7A080299B0C7E24 crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:2C21AB17D9DEE132|rigid:iybbq0MLk2tLg3a3n7UJtY976Ts false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P25382 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-21980|uniprotkb:Q8NKJ4|uniprotkb:D6VR74|ensemblfungi:YCR072C psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:nle1_yeast(display_long)|uniprotkb:RSA4(gene name)|psi-mi:RSA4(display_short)|uniprotkb:Notchless protein homolog 1(gene name synonym)|uniprotkb:Ribosome biogenesis factor RSA4(gene name synonym)|uniprotkb:YCR72C(orf name)|uniprotkb:YCR072C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709191|imex:IM-23972-303 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_009997.2|sgd:S000000668|dip:DIP-5365N|ensemblfungi:YCR072C(gene)|ensemblfungi:YCR072C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:4WJU|rcsb pdb:4WJV|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLF|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|reactome:R-SCE-983168|mint:P25382|sgd:YCR072C(identity) - crc64:545C8B4250BCB0C9 crc64:04451B0C38FB5318 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:j3sfwkJbcWZXmn3nee3XTZwxu/4559292 intact-crc:2FE3E14F72762461|rigid:+xr4dl+gMi2xcGnX/0SjeFFKqcU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P20484 uniprotkb:Q06511 intact:EBI-10930|uniprotkb:D6VXR4 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:mak11_yeast(display_long)|uniprotkb:MAK11(gene name)|psi-mi:MAK11(display_short)|uniprotkb:Maintenance of killer protein 11(gene name synonym)|uniprotkb:YKL021C(locus name) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709183|imex:IM-23972-302 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0016020"(membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|sgd:S000001504|refseq:NP_012904.3|dip:DIP-6516N|sgd:YKL021C(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:B3BD72C4E37ACF11 crc64:23E401BB1B82470C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2016/03/15 rogid:ajUmz1eIMUuSxd6OOELUAnzQX6w559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:0132D6DAC41B8C6A|rigid:4lryXw+1eV1uHkisH21T9HJS/44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:Q07896 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709175|imex:IM-23972-301 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) - crc64:309ED6897EA24F73 crc64:4CA9461A4A1F1E9E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 intact-crc:65A1D1974E5ED253|rigid:wnw8/wBHIYp9uVYhoHNFmwxuJCM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06218 uniprotkb:P10962 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709167|imex:IM-23972-300 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:CCE8E0AF8B4071D7 crc64:309ED6897EA24F73 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:FEFC6F5D66C5F139|rigid:ZwO4oOVFJoxbJ23BN4R3Ir0UZM8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P10962 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709159|imex:IM-23972-299 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) - crc64:64714DDFAFB90B5D crc64:309ED6897EA24F73 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 intact-crc:2EA6948550D0AFA1|rigid:xgDm6tnDNMWK0DEcvfnV0spoc7A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P10962 uniprotkb:P39744 intact:EBI-10937|ensemblfungi:YAL025C|uniprotkb:D6VPJ3 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:mak16_yeast(display_long)|uniprotkb:MAK16(gene name)|psi-mi:MAK16(display_short)|uniprotkb:Maintenance of killer protein 16(gene name synonym)|uniprotkb:YAL025C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709151|imex:IM-23972-298 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YAL025C(gene)|ensemblfungi:YAL025C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0007049"(cell cycle)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR006958(Mak16 protein)|interpro:IPR029004|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|refseq:NP_009377.2|sgd:S000000023|dip:DIP-6521N|sgd:YAL025C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:309ED6897EA24F73 crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKYCSTLVudDW4S6uraTtZaU3e0Q559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:EF24DD53CE8466E4|rigid:R7NY9QEPwE06IRGr3RgacR7BgwU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P25582 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709247|imex:IM-23972-310 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:48C3B9AE076B9B8F crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:F6C8FBEC03500B0F|rigid:pxdRHN5hGvvscsp8NySssjPdCzg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:P25582 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709239|imex:IM-23972-309 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:A01D24DE0078FE11 crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:C5B735D3BB0E2926|rigid:l6QqgYEWEjoBaC5heSjmh2WgmHM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P25582 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709231|imex:IM-23972-308 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:EC6EDB2FCE252D4A crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:2E9EBB3BC6E3CAAA|rigid:GUF4665Wc2zFoel/RISVWJAgb24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:P25582 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709223|imex:IM-23972-307 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:4ACE390E6B1700EA crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:F56E1E8056F2BF60|rigid:96NB4pLRI0KHmtbh6nfstPXCopk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P36080 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709215|imex:IM-23972-306 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:D7A080299B0C7E24 crc64:BCEDE9F10A466E6E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:1E8D1A926FC10F4F|rigid:RmtIRgI7RWrpK0od0oH8eSw/nJU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P36049 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709207|imex:IM-23972-305 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:D7A080299B0C7E24 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:1C8B41CB9A0FF08E|rigid:0j4CMg3WJei0Npvwb5ARVEh50Uk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P25582 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709311|imex:IM-23972-318 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:0533013C276095DF crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:E667DF834D9498B5|rigid:ju5JVQFNMjU0FNKutgPuEDGsUm8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q12176 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709303|imex:IM-23972-317 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:D7A080299B0C7E24 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:C0F139E5E8B59A04|rigid:FH6ftONPnHwmY9VywGfNdKpwL68 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:P25582 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709295|imex:IM-23972-316 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:9B761BB0318EFFC8 crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:D8C5B7CC5ECC4EC0|rigid:T9Mmf3KYrSoT9SS0K7exL5IRR44 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P25582 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709287|imex:IM-23972-315 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) - crc64:338F73B13DAE3282 crc64:D7A080299B0C7E24 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 intact-crc:42BE81F2810C94D0|rigid:nkZRNbpGYLZcuJ6sW4rYSxDYKoA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q07896 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709279|imex:IM-23972-314 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) - crc64:D7A080299B0C7E24 crc64:4CA9461A4A1F1E9E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 intact-crc:204C6456ACD01CB9|rigid:+t138eC+iVCxnVCo3zvqjDoXNlM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:Q06205 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709271|imex:IM-23972-313 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:D7A080299B0C7E24 crc64:CF90C6714F04572E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:4573D0803E6EF4B2|rigid:ZnSuOMz86SuNnuRZQf/EXp5YAGI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P47108 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709263|imex:IM-23972-312 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - crc64:D7A080299B0C7E24 crc64:7647D48DA557D4D4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:746B41FF1C22D90F|rigid:fMorpLDUyZqcUJt4FKg1HiqGiWQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25582 uniprotkb:P43586 intact:EBI-17814|uniprotkb:D6VQW3|ensemblfungi:YCL054W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:spb1_yeast(display_long)|uniprotkb:SPB1(gene name)|psi-mi:SPB1(display_short)|uniprotkb:YCL054W(locus name)|uniprotkb:YCL54W(orf name)|uniprotkb:YCL431(orf name)|uniprotkb:S-adenosyl-L-methionine-dependent methyltransferase(gene name synonym)|uniprotkb:Suppressor of PAB1 protein 1(gene name synonym)|uniprotkb:2'-O-ribose RNA methyltransferase SPB1(gene name synonym)|uniprotkb:AdoMet-dependent rRNA methyltransferase SPB1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709255|imex:IM-23972-311 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009877.1|sgd:S000000559|ensemblfungi:YCL054W(gene)|ensemblfungi:YCL054W_mRNA(transcript)|go:"GO:0000453"(enzyme-directed rRNA 2'-O-methylation)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0001510"(RNA methylation)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0008173"(RNA methyltransferase activity)|go:"GO:0008650"("rRNA (uridine-2'-O-)-methyltransferase activity")|go:"GO:0016435"("rRNA (guanine) methyltransferase activity")|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031167"(rRNA methylation)|go:"GO:0070039"("rRNA (guanosine-2'-O-)-methyltransferase activity")|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR012920(Spb1, C-terminal)|interpro:IPR015507(Ribosomal RNA methyltransferase J)|interpro:IPR024576|interpro:IPR028589|interpro:IPR029063|rcsb pdb:6ELZ|rcsb pdb:6EM5|rcsb pdb:6YLX|mint:P25582|dip:DIP-1777N|sgd:YCL054W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:D7A080299B0C7E24 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Azf4ufBGMlaABOVtDcmWtAD4+1Q559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:04C0A8B928E4B3C3|rigid:5h4qi2/e4G0l64gLoEoBO/RaxS8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:Q04660 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709407|imex:IM-23972-330 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:60747607A6E5E4A8 crc64:6542DFE4670341CA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:5C951ED60EA33085|rigid:dLmtioB1H6jMkj/B8Zc5yF+RVSQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P32892 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709399|imex:IM-23972-329 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:69970294E9C980F9 crc64:60747607A6E5E4A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:1FD6F54A358B4F9C|rigid:Sf0w+DCDNTpqyqbRyzLIgvOoPQ8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P40693 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709391|imex:IM-23972-328 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:60747607A6E5E4A8 crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:F09429D183EA8DAC|rigid:ShSvNep3QR2JUFRkgLw8oUQ28ao false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P32892 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709383|imex:IM-23972-327 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:545C8B4250BCB0C9 crc64:60747607A6E5E4A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:B4913709E9FB778C|rigid:gobiw/C77q9EQRc++vLUEkusSBc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P32892 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709375|imex:IM-23972-326 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:48C3B9AE076B9B8F crc64:60747607A6E5E4A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:6A40EBA819ADDEEE|rigid:vcUgB0/p5Dqf0iDDh/fnuE0GjjQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P37838 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709367|imex:IM-23972-325 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:60747607A6E5E4A8 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:A94E841C628CFE25|rigid:PrIsMS7ogQe2WREDHbBmvc+DHpM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P36049 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709359|imex:IM-23972-324 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:60747607A6E5E4A8 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:03D8F422183B7B26|rigid:jexNBPQlwzU+NdMfD2enejoWn60 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:P32892 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709351|imex:IM-23972-323 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:60747607A6E5E4A8 crc64:60747607A6E5E4A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:CDC33AB48A0C6FA5|rigid:PZMsE2tqks13e8Yr6QTHxogRX1o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P27476 uniprotkb:P43586 intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709343|imex:IM-23972-322 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|sgd:YGR159C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:90DEEE7BBC20BC0C crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:260FD76C25EF11CB|rigid:EgRq2OItVEMFzWI7VvxXq3EsMRU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P27476 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-12274|ensemblfungi:YGR159C|uniprotkb:D6VUT9 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nsr1_yeast(display_long)|uniprotkb:NSR1(gene name)|psi-mi:NSR1(display_short)|uniprotkb:YGR159C(locus name)|uniprotkb:G7001(orf name)|uniprotkb:p67(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709335|imex:IM-23972-321 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YGR159C(gene)|ensemblfungi:YGR159C_mRNA(transcript)|go:"GO:0000028"(ribosomal small subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034276|interpro:IPR035979|interpro:IPR034272|refseq:NP_011675.1|sgd:S000003391|mint:P27476|dip:DIP-5537N|sgd:YGR159C(identity) - crc64:61261815EA3DEE5C crc64:90DEEE7BBC20BC0C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:q0/AgJC55iTpn/5kCsxal2kQ7Ls559292 intact-crc:573410BF5957C11F|rigid:dQeddKwYLFODb9b1BuR5Xr96Neg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P25808 uniprotkb:P37838 intact:EBI-17819|uniprotkb:D6VTM9|ensemblfungi:YFL002C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:spb4_yeast(display_long)|uniprotkb:SPB4(gene name)|psi-mi:SPB4(display_short)|uniprotkb:Suppressor of PAB1 protein 4(gene name synonym)|uniprotkb:YFL002C(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709327|imex:IM-23972-320 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116654.1|sgd:S000001894|ensemblfungi:YFL002C(gene)|ensemblfungi:YFL002C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|mint:P25808|dip:DIP-5423N|sgd:YFL002C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:B2EC8B8B5E34AA10 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:/YeCW4PWN4ZjpxPPi+R95c+81U0559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:713E23A9E99305B0|rigid:/AykIoojRh0B6NEyG0lIGaLxrgc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P25808 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-17819|uniprotkb:D6VTM9|ensemblfungi:YFL002C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:spb4_yeast(display_long)|uniprotkb:SPB4(gene name)|psi-mi:SPB4(display_short)|uniprotkb:Suppressor of PAB1 protein 4(gene name synonym)|uniprotkb:YFL002C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709319|imex:IM-23972-319 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_116654.1|sgd:S000001894|ensemblfungi:YFL002C(gene)|ensemblfungi:YFL002C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|mint:P25808|dip:DIP-5423N|sgd:YFL002C(identity) - crc64:4A11F6CDF779DB5A crc64:B2EC8B8B5E34AA10 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:/YeCW4PWN4ZjpxPPi+R95c+81U0559292 intact-crc:62D2F8395C0A3899|rigid:MTLH8U3s8LX3RVSFD8q96+XVNUc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P32892 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709431|imex:IM-23972-333 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) - crc64:0533013C276095DF crc64:60747607A6E5E4A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 intact-crc:0711BF3A93D019B5|rigid:NAA60Ge88VKpIrogaCkdb5TZmMg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:Q12176 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709423|imex:IM-23972-332 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:60747607A6E5E4A8 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:B7F3F4AE3032857A|rigid:B+tCbRo9aRCRphDLDY5GyFKgnWs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32892 uniprotkb:Q08208 intact:EBI-6170|uniprotkb:D6VXZ4|ensemblfungi:YLL008W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:drs1_yeast(display_long)|uniprotkb:DRS1(gene name)|psi-mi:DRS1(display_short)|uniprotkb:YLL008W(locus name)|uniprotkb:L1345(orf name)|uniprotkb:Deficiency of ribosomal subunits protein 1(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709415|imex:IM-23972-331 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013093.1|sgd:S000003931|dip:DIP-6471N|mint:P32892|ensemblfungi:YLL008W(gene)|ensemblfungi:YLL008W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLL008W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:60747607A6E5E4A8 crc64:338F73B13DAE3282 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:7Ae/e5Au6CjIhNNSKTlm2PvpwWM559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:397FF2F26866ECF9|rigid:PgduFrgCvLVJVttCSQ7ldofjjHQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08287 uniprotkb:P34241 intact:EBI-12135|uniprotkb:D6W1S5|ensemblfungi:YOL144W intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:nop8_yeast(display_long)|uniprotkb:YOL144W(locus name)|uniprotkb:Nucleolar protein 8(gene name synonym)|uniprotkb:NOP8(gene name)|psi-mi:NOP8(display_short) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709479|imex:IM-23972-339 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034138|interpro:IPR035979|ensemblfungi:YOL144W(gene)|ensemblfungi:YOL144W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|refseq:NP_014497.1|sgd:S000005504|dip:DIP-4206N|mint:Q08287|sgd:YOL144W(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PR7N6gE4Il6ofUCopWK8ztDDVFo559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:B51D1FD4B23C9336|rigid:Oed2f4Mj+/I9jBFas47Yn4MOVFk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05942 uniprotkb:P34241 intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709471|imex:IM-23972-338 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:32C06A5F32D2218E|rigid:7w3Fud8WrCb65iGAB6ee5jDCk8o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:Q04660 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709463|imex:IM-23972-337 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:D4EC1FA19E051367 crc64:6542DFE4670341CA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:11C6440F1F0D01D4|rigid:ttNXLdxI7vAC2xcS6Mm9kJByfzk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P34241 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709455|imex:IM-23972-336 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - - crc64:D4EC1FA19E051367 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:49C7721B61FC6944|rigid:K58qJHaKpSqb2rQgToCwDlMhUKs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:P47108 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709447|imex:IM-23972-335 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - crc64:D4EC1FA19E051367 crc64:7647D48DA557D4D4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:CAF9F63530724575|rigid:PmDF7kXvtlolGJ2yPb6tNMTvb0Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:P34241 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709439|imex:IM-23972-334 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) - crc64:D4EC1FA19E051367 crc64:D4EC1FA19E051367 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 intact-crc:2A3979440714ACEC|rigid:zodmpOBbrVVLy29pFCppe6YqZpQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P40007 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709559|imex:IM-23972-349 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) - crc64:4A11F6CDF779DB5A crc64:B1D27F0B817AADED figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 intact-crc:CD5050264C952B72|rigid:8xAqzqUcsBqooqqjzuKfuldw29Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P36049 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709551|imex:IM-23972-348 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:48C3B9AE076B9B8F crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:CCC42A992C5310E4|rigid:1g/qiRfXAaZ765aIicpq371uUdY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P38911 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709543|imex:IM-23972-347 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:4A11F6CDF779DB5A crc64:A01D24DE0078FE11 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:FB0A67BC6A3F7CFB|rigid:4Mwp1bLuqU4+BqA6Bw50oE3q1/A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P38789 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-18160|uniprotkb:D3DL15|ensemblfungi:YHR066W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:ssf1_yeast(display_long)|uniprotkb:YHR066W(locus name)|uniprotkb:SSF1(gene name)|psi-mi:SSF1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709535|imex:IM-23972-346 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_011933.1|sgd:S000001108|ensemblfungi:YHR066W(gene)|ensemblfungi:YHR066W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008361"(regulation of cell size)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|rcsb pdb:6C0F|dip:DIP-6501N|mint:P38789|sgd:YHR066W(identity) - crc64:4A11F6CDF779DB5A crc64:6F0344993BEF2217 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:yGSNhWjddgUIG0ef17sZ0ZifF3U559292 intact-crc:9911AE0BFBF6FE16|rigid:MN5ip1AngxQajhDARv+znIg6lKI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:P36049 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709527|imex:IM-23972-345 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:C4FF2FB5B04FFBF9 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:D758499F2B2F999E|rigid:KyZNCisRL/BsvML6CxkBvFw4SIc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P37838 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709519|imex:IM-23972-344 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:4A11F6CDF779DB5A crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:D565F665EE9BC883|rigid:2CUP9pxefBn3T48d7UU73R8mm3k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P36080 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709511|imex:IM-23972-343 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:4A11F6CDF779DB5A crc64:BCEDE9F10A466E6E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:6E1248D0EEE960D0|rigid:hCphdCf2e2lU9ksx5uySH3RAlo4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P36049 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709503|imex:IM-23972-342 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:4A11F6CDF779DB5A crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:11E45D3346E9A518|rigid:y7aUCIbxvzzSJ/p4oR4ZhYydUak false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P35178 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-16002|uniprotkb:D6VS74|ensemblfungi:YDR087C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:rrp1_yeast(display_long)|uniprotkb:RRP1(gene name)|psi-mi:RRP1(display_short)|uniprotkb:D4478(orf name)|uniprotkb:YDR087C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709495|imex:IM-23972-341 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) sgd:S000002494|interpro:IPR010301(Nucleolar, Nop52)|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YDR087C(gene)|ensemblfungi:YDR087C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030688"(preribosome, small subunit precursor)|refseq:NP_010372.3|dip:DIP-4622N|mint:P35178|sgd:YDR087C(identity) - crc64:48C3B9AE076B9B8F crc64:7E906A028ADAE8A6 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:e7JQmwcQSik+AnzD1MH8KUpNGb4559292 intact-crc:50C6E908B4319B0B|rigid:RWTNQmkLrVqn6O8fGvX1xXnlwt8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P34241 uniprotkb:Q12176 intact:EBI-26595|uniprotkb:P34242|uniprotkb:D6VXS2|ensemblfungi:YKL014C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:urb1_yeast(display_long)|uniprotkb:YKL014C(locus name)|uniprotkb:URB1(gene name)|psi-mi:URB1(display_short)|uniprotkb:NPA1(gene name synonym)|uniprotkb:Unhealthy ribosome biogenesis protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709487|imex:IM-23972-340 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001497|refseq:NP_012911.3|mint:P34241|dip:DIP-2701N|ensemblfungi:YKL014C(gene)|ensemblfungi:YKL014C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|interpro:IPR021714|interpro:IPR032436|interpro:IPR039844|sgd:YKL014C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:D4EC1FA19E051367 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4I7d0+JR+f7iRiW2Df3A/ahS6wA559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:52F06BDC4B839942|rigid:rrH/Ew/vHHYO3VCr93AEiCchE6Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q06218 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709623|imex:IM-23972-357 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|sgd:YLR276C(identity) - crc64:4A11F6CDF779DB5A crc64:CCE8E0AF8B4071D7 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 intact-crc:60ADECAB47B3755C|rigid:24ll/tyqXWx6WD5W7Mv5nLlge8w false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q07896 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709631|imex:IM-23972-358 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) - crc64:4A11F6CDF779DB5A crc64:4CA9461A4A1F1E9E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 intact-crc:B5FE635D13DA2514|rigid:sxrIN1nsNKyidR7PHuNzgd2Nh3A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q06205 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709615|imex:IM-23972-356 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:4A11F6CDF779DB5A crc64:CF90C6714F04572E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:CB3E7CC753221679|rigid:yv3an7LkpXPC4hukGh3PHoaa9I4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P36049 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709607|imex:IM-23972-355 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:EE15D51A7F6BE1A2 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:7DF39C720E418FC3|rigid:X6yQp1LR/zZMRDuNIpifI/6UlL8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P53188 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709599|imex:IM-23972-354 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - crc64:4A11F6CDF779DB5A - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:9F1D6A674E3D5930|rigid:BYVuPqV1HIoE6vHr0F1Q0S1tCGE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P36049 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709591|imex:IM-23972-353 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:DA8A085EC50FF430 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:6F7BDE368CE56122|rigid:M+X1/I5RO8G8QEHXUmAkmro2mDE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P43586 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709583|imex:IM-23972-352 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:4A11F6CDF779DB5A crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:9919E29EFF07A34F|rigid:vz/dP5wngEefUWWeW88OIvZp0CI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P40078 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709575|imex:IM-23972-351 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:4A11F6CDF779DB5A crc64:545C8B4250BCB0C9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:149EFB188E49503F|rigid:+b0rpLOvF5AegRC7lhkMP3yX3K8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:P40010 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709567|imex:IM-23972-350 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) - crc64:4A11F6CDF779DB5A crc64:F75E4860D114756A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 intact-crc:CED5575BA620C065|rigid:x97qIi+CvjepO+dnpq6tC6wtKd4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P37838 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709703|imex:IM-23972-367 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:BCEDE9F10A466E6E crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:64A6DEC4957ABB70|rigid:ZcQdHb7N7W1kIZelYIUT0EC0c9Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P36080 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709695|imex:IM-23972-366 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:BCEDE9F10A466E6E crc64:BCEDE9F10A466E6E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:E122F8C521774E03|rigid:OIzfePvuHmC39K73I9j/opU08uA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q12754 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709687|imex:IM-23972-365 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:4A11F6CDF779DB5A crc64:92333BCD53CB095F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:96DC27395E3B7D6C|rigid:pwi45J88SouS3G/dYnB89i2FoKk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P36049 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709679|imex:IM-23972-364 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:0533013C276095DF crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:C52061C8E8F56629|rigid:dE9jDpptLSO1LqIpIwdcExk4gI4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12153 uniprotkb:P36049 intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709671|imex:IM-23972-363 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:83306767C4F58816 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:CDF0A9DB7B7D953F|rigid:5KS65EEUfak0K6BIGAjGJAb7LkU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:P36049 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709663|imex:IM-23972-362 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:9B761BB0318EFFC8 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:DA6CD5600F767AD4|rigid:0tcSy/4X5hRSB7sAw/dIUvpLIDY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q08687 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709655|imex:IM-23972-361 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) - crc64:4A11F6CDF779DB5A crc64:8C7C0FF4AD6F5ABA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 intact-crc:DD7911E10677666D|rigid:b4pW36McssgN5wx6bsGmm8coRu4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36049 uniprotkb:Q08235 intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W intact:EBI-3775|uniprotkb:D6W1Z1|ensemblfungi:YOL077C psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:brx1_yeast(display_long)|uniprotkb:YOL077C(locus name)|uniprotkb:BRX1(gene name)|psi-mi:BRX1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709647|imex:IM-23972-360 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) refseq:NP_014565.2|sgd:S000005437|dip:DIP-6317N|mint:Q08235|ensemblfungi:YOL077C(gene)|ensemblfungi:YOL077C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR026532|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YOL077C(identity) - crc64:4A11F6CDF779DB5A crc64:31466853EF0E7301 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 rogid:mPR6HWKwM6RNCRE/vezsYlCmEGY559292 intact-crc:8536212651005D47|rigid:IjgWqBz40YKdLTvgFGdmIx4pZ3c false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P36049 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-6289|uniprotkb:D6VX28|ensemblfungi:YKL172W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:ebp2_yeast(display_long)|uniprotkb:EBP2(gene name)|psi-mi:EBP2(display_short)|uniprotkb:YKL172W(locus name)|uniprotkb:YKL636(orf name)|uniprotkb:EBNA1-binding protein homolog(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709639|imex:IM-23972-359 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_012749.1|sgd:S000001655|dip:DIP-6507N|mint:P36049|ensemblfungi:YKL172W(gene)|ensemblfungi:YKL172W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003729"(mRNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR008610(Eukaryotic rRNA processing)|rcsb pdb:5Z1G|rcsb pdb:5Z3G|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YKL172W(identity) - crc64:338F73B13DAE3282 crc64:4A11F6CDF779DB5A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:REBsvnJsdQ5YZAYierE0DT1mCx4559292 intact-crc:02ABA77041994D37|rigid:L0KTg9brIUh/8OtqNevUvCxevoY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P36160 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709767|imex:IM-23972-375 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:48C3B9AE076B9B8F crc64:4ACE390E6B1700EA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:2C5ED9122DDFAB81|rigid:3f3VoieZW4xZPNQm7lMEnvQ3W9Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36146 uniprotkb:Q07845 intact:EBI-10053|uniprotkb:Q66R55|uniprotkb:D6VXC4|ensemblfungi:YKR063C intact:EBI-3741923|uniprotkb:Q9P4W6|uniprotkb:D6VXX0|ensemblfungi:YLL035W psi-mi:las1_yeast(display_long)|uniprotkb:YKR063C(locus name)|uniprotkb:LAS1(gene name)|psi-mi:LAS1(display_short) psi-mi:grc3_yeast(display_long)|uniprotkb:GRC3(gene name)|psi-mi:GRC3(display_short)|uniprotkb:Protein GRC3(gene name synonym)|uniprotkb:YLL035W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709759|imex:IM-23972-374 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001771|ensemblfungi:YKR063C(gene)|ensemblfungi:YKR063C_mRNA(transcript)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0090730"(Las1 complex)|interpro:IPR007174(Las1-like)|refseq:NP_012989.3|dip:DIP-6398N|reactome:R-SCE-6791226|sgd:YKR063C(identity) sgd:S000003958|refseq:NP_013065.1|interpro:IPR032319|ensemblfungi:YLL035W(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006364"(rRNA processing)|go:"GO:0006396"(RNA processing)|ensemblfungi:YLL035W_mRNA(transcript)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0051731"(polynucleotide 5'-hydroxyl-kinase activity)|go:"GO:0000448"("cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|reactome:R-SCE-6791226|interpro:IPR027417|sgd:YLL035W(identity) - crc64:B69F14A3DE211FB8 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QWLtqIfkFyn/6NGS132UJsbxIr8559292 rogid:Nak5r6YkWgbLo8wLp7siuxVPe3Q559292 intact-crc:BEDC0CCB65CB5E89|rigid:VBbDeusyTBFWEWKT0KS0NUqskBU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36120 uniprotkb:P43586 intact:EBI-5629|uniprotkb:D6VX89|ensemblfungi:YKR024C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:dbp7_yeast(display_long)|uniprotkb:YKR024C(locus name)|uniprotkb:DBP7(gene name)|psi-mi:DBP7(display_short)|uniprotkb:DEAD box protein 7(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709751|imex:IM-23972-373 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012949.1|sgd:S000001732|dip:DIP-1833N|mint:P36120|ensemblfungi:YKR024C(gene)|ensemblfungi:YKR024C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|sgd:YKR024C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:A7E25BC16AE09A0B crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WUW9Kewy2qZDmm61bzPIHxXo0dA559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:8F9DB6B4F62991AF|rigid:k9mvtsqUZKTznMMvulSy5vvP13g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P36080 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709743|imex:IM-23972-372 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - crc64:0533013C276095DF crc64:BCEDE9F10A466E6E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:89FA765E94F03C84|rigid:wWEadwo3liS4c8FJUss39LiUuZQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P36080 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709735|imex:IM-23972-371 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) - - crc64:BCEDE9F10A466E6E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 intact-crc:C7DA5A2A3725A73B|rigid:WMYn5RJAH2uHeWYlic8kdtd4ZSQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P43586 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709727|imex:IM-23972-370 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:BCEDE9F10A466E6E crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:EFF6AFBA7F7A1592|rigid:J6qlKvm8A8fz02w11H6TqJcqqFw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P39744 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709719|imex:IM-23972-369 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:BCEDE9F10A466E6E crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:C9FA1FEFF93CE1DB|rigid:2LcnOW8s38HqxD2TIN9MNnPuje4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36080 uniprotkb:P38911 intact:EBI-26762|uniprotkb:D6VXK5|ensemblfungi:YKL082C intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C psi-mi:rrp14_yeast(display_long)|uniprotkb:YKL082C(locus name)|uniprotkb:Ribosome biogenesis protein RRP14(gene name synonym)|uniprotkb:RRP14(gene name)|psi-mi:RRP14(display_short) psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709711|imex:IM-23972-368 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012841.1|sgd:S000001565|mint:P36080|dip:DIP-2694N|ensemblfungi:YKL082C(gene)|ensemblfungi:YKL082C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|interpro:IPR007019(Surfeit locus 6)|interpro:IPR029188|interpro:IPR029190|rcsb pdb:6C0F|sgd:YKL082C(identity) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) - crc64:BCEDE9F10A466E6E crc64:A01D24DE0078FE11 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:mhHsRW3YSoq7gKXnOi3oGQiwTVw559292 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 intact-crc:54C20E60B802C9A3|rigid:ON4CXt6Uv+1WY1iHr8vzDSo0zLg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40010 uniprotkb:P37838 intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709847|imex:IM-23972-385 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:F75E4860D114756A crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:1B0F39544542DC04|rigid:SgaldcZbY7nVH5CRcyzalp6cLuc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40007 uniprotkb:P37838 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709839|imex:IM-23972-384 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:B1D27F0B817AADED crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:F72421C017A87353|rigid:mGH+kQ/UrlEosVjyl3KAND+2wrA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P37838 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709831|imex:IM-23972-383 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:48C3B9AE076B9B8F crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:D28A8030DF0231E3|rigid:hO11weJovTH+MvnecY5jP+jT3q8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P38779 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709823|imex:IM-23972-382 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) - crc64:61261815EA3DEE5C crc64:13A2AFA0B927CD98 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 intact-crc:9C00F8A4AC3E0DA4|rigid://ZC/7Kw5m8ObHbmKG8u/2WnHaA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:P37838 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709815|imex:IM-23972-381 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:C4FF2FB5B04FFBF9 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:72270FF35C755927|rigid:iXQY4duTsIMfgN+2ULxJBWJuIms false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P37838 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709807|imex:IM-23972-380 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:61261815EA3DEE5C crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:91A8EAD00F851670|rigid:GGyTD9M5echsMuDZxZE7AL6KW0o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P36160 uniprotkb:Q12176 intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709799|imex:IM-23972-379 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:4ACE390E6B1700EA - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:FFCFEA7ACE2974B2|rigid:+7LyQIzgQ8FMY9cCIF36hzQSpQo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08746 uniprotkb:P36160 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709791|imex:IM-23972-378 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:7DFF6C51DDD2ADD6 crc64:4ACE390E6B1700EA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:0D481D891A2B0AAE|rigid:6Leb+0Sxw8lXSbwkWGTV6eVsk1U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P36160 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709783|imex:IM-23972-377 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:640324779AE4D716 crc64:4ACE390E6B1700EA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:06CF757F0055D78D|rigid:n7+qkyinEl54PvNA3u40B3eAmB4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40010 uniprotkb:P36160 intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W intact:EBI-15881|ensemblfungi:YKR081C|uniprotkb:D6VXE1 psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:rpf2_yeast(display_long)|uniprotkb:RPF2(gene name)|psi-mi:RPF2(display_short)|uniprotkb:YKR401(orf name)|uniprotkb:YKR081C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709775|imex:IM-23972-376 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) ensemblfungi:YKR081C(gene)|ensemblfungi:YKR081C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008312"(7S RNA binding)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR007109(Brix)|interpro:IPR039770|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|refseq:NP_013007.1|sgd:S000001789|dip:DIP-6602N|mint:P36160|sgd:YKR081C(identity) - crc64:F75E4860D114756A crc64:4ACE390E6B1700EA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 rogid:04/baMWvwagXiHur91JZhUhoUuo559292 intact-crc:FF235913B966C99E|rigid:XQgZeWR2jForcCHF4W+Lq4wEjIc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q08687 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709919|imex:IM-23972-394 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) - crc64:61261815EA3DEE5C crc64:8C7C0FF4AD6F5ABA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 intact-crc:036E43FE95400415|rigid:x5xmyit7cG9s8NT4oldQU2AboYM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q08208 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709911|imex:IM-23972-393 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:61261815EA3DEE5C crc64:338F73B13DAE3282 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:355E0489D99672CF|rigid:BHti678LjyGyuAK3GUD0Nh97N/g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P37838 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709903|imex:IM-23972-392 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:EE15D51A7F6BE1A2 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:5619F82D1D1BC131|rigid:AKL5Qx7tk8yBRXuLMqfa/1LV3QI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P37838 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709895|imex:IM-23972-391 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:640324779AE4D716 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:A64765C01268CBF1|rigid:rN2ZRXHbQWetEYML0UzA6xcBI1Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P53883 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-29032|uniprotkb:D6W110|ensemblfungi:YNL175C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nop13_yeast(display_long)|uniprotkb:NOP13(gene name)|psi-mi:NOP13(display_short)|uniprotkb:N1665(orf name)|uniprotkb:YNL175C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709887|imex:IM-23972-390 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_014224.2|sgd:S000005119|dip:DIP-4331N|mint:P53883|ensemblfungi:YNL175C(gene)|ensemblfungi:YNL175C_mRNA(transcript)|go:"GO:0001731"(formation of translation preinitiation complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030684"(preribosome)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0034057"(RNA strand-exchange activity)|go:"GO:0043024"(ribosomal small subunit binding)|go:"GO:0097010"(eukaryotic translation initiation factor 4F complex assembly)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034225|interpro:IPR034226|interpro:IPR035979|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-72662|reactome:R-SCE-72702|sgd:YNL175C(identity) - crc64:61261815EA3DEE5C crc64:FB1A0FB46B13C201 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:13Kj/Exmk8m6xKw1rbat8NkPius559292 intact-crc:AAC2700E76E4F190|rigid:k0Ue/BguMR60x+RJe+x2Y0Fi7Cs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53188 uniprotkb:P37838 intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709879|imex:IM-23972-389 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - - crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:F5607AA082AFDFE7|rigid:Pkb+PG1Qk1L994pYe7krS35iLf0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P37838 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709871|imex:IM-23972-388 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) - crc64:DA8A085EC50FF430 crc64:61261815EA3DEE5C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 intact-crc:CADC3A3E0DCC8D5E|rigid:JyZ12wG60tYdqtvUSdDt+IRAbig false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P43586 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709863|imex:IM-23972-387 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:61261815EA3DEE5C crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:D0431C08A0A50DB7|rigid:X55pAX1QvTNkcx8sZ9fTFEQsnjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:P40078 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709855|imex:IM-23972-386 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:61261815EA3DEE5C crc64:545C8B4250BCB0C9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:01B5C07165FB7CBD|rigid:5ekZ+wgDlnCvXpYVIOh6OuUXLhA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P38112 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709967|imex:IM-23972-400 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:545C8B4250BCB0C9 crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:BD67AC07540564A8|rigid:T8GomUb4HUqssfZwSQSQS524zaY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P38112 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709959|imex:IM-23972-399 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:48C3B9AE076B9B8F crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:C54DF302DE78BA70|rigid:kdNhkrX2853kYcxCZdars5UokbI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P38112 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709951|imex:IM-23972-398 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:EC6EDB2FCE252D4A crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:37FA6F9DD16B7176|rigid:HxbtGrD5DwGZejthXewX/L1A0x8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q12754 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709943|imex:IM-23972-397 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:61261815EA3DEE5C crc64:92333BCD53CB095F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:719F1BAC97FB05F8|rigid:e0jZbhMybl0NwWRnpzCizKA8lLg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q12389 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709935|imex:IM-23972-396 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:61261815EA3DEE5C crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:427E8F25B75CA034|rigid:4INPUK8FVGkJfnA9YFTO70wTJzc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37838 uniprotkb:Q12176 intact:EBI-12122|uniprotkb:D6W3X0|ensemblfungi:YPL043W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:nop4_yeast(display_long)|uniprotkb:YPL043W(locus name)|uniprotkb:Nucleolar protein NOP77(gene name synonym)|uniprotkb:NOP4(gene name)|psi-mi:NOP4(display_short)|uniprotkb:NOP77(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709927|imex:IM-23972-395 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL043W(gene)|ensemblfungi:YPL043W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034806|interpro:IPR034808|interpro:IPR034809|interpro:IPR035979|refseq:NP_015282.1|sgd:S000005964|dip:DIP-3891N|mint:P37838|sgd:YPL043W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:61261815EA3DEE5C - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:R77UUAa8AF0k70aGHQ+MiwWZX3U559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:D9229291F0315B4C|rigid:PRthYeU9q1eyCsrsUgX1R+jUmjo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P47108 uniprotkb:P38805 intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710039|imex:IM-23972-409 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - crc64:7647D48DA557D4D4 crc64:EC6EDB2FCE252D4A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:582EF13A7266FED2|rigid:/xk8W1exFkTHzkGvvb2rbZuGLIs false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38805 uniprotkb:P39744 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710031|imex:IM-23972-408 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:EC6EDB2FCE252D4A crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:A68AC24009DCD250|rigid:oaW7nEzIK9geFziG9GVoHh+MLWg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06511 uniprotkb:P38789 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-18160|uniprotkb:D3DL15|ensemblfungi:YHR066W psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:ssf1_yeast(display_long)|uniprotkb:YHR066W(locus name)|uniprotkb:SSF1(gene name)|psi-mi:SSF1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710023|imex:IM-23972-407 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) refseq:NP_011933.1|sgd:S000001108|ensemblfungi:YHR066W(gene)|ensemblfungi:YHR066W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0008361"(regulation of cell size)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|rcsb pdb:6C0F|dip:DIP-6501N|mint:P38789|sgd:YHR066W(identity) - crc64:23E401BB1B82470C crc64:6F0344993BEF2217 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:yGSNhWjddgUIG0ef17sZ0ZifF3U559292 intact-crc:EE12EDCFDC198812|rigid:UW2bkXFd6ubGl3/Po/TWiTtK6C0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38779 uniprotkb:P40693 intact:EBI-24538|uniprotkb:D3DL01|ensemblfungi:YHR052W intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:cic1_yeast(display_long)|uniprotkb:CIC1(gene name)|psi-mi:CIC1(display_short)|uniprotkb:NSA3(gene name synonym)|uniprotkb:Core interacting component 1(gene name synonym)|uniprotkb:YHR052W(locus name) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710015|imex:IM-23972-406 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011919.1|sgd:S000001094|dip:DIP-6491N|mint:P38779|ensemblfungi:YHR052W(gene)|ensemblfungi:YHR052W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000469"(cleavage involved in rRNA processing)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0000502"(proteasome complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030163"(protein catabolic process)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0031118"(rRNA pseudouridine synthesis)|go:"GO:0031120"(snRNA pseudouridine synthesis)|go:"GO:0031429"(box H/ACA snoRNP complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070628"(proteasome binding)|interpro:IPR023674|interpro:IPR028364|interpro:IPR028365|rcsb pdb:3JCT|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|go:"GO:0034513"(box H/ACA snoRNA binding)|sgd:YHR052W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:13A2AFA0B927CD98 crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rdhoaLdCr+bDCy9BYwEA9foQFWQ559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:34CF040966235175|rigid:REKkjWPzVM3RcgdhHOJjwa0kenY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P38112 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710007|imex:IM-23972-405 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:0533013C276095DF crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:7C96CE8E48DEDEDE|rigid:MWZP0OKWqX9qXWtQuI+2MH7p73I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:Q08208 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709999|imex:IM-23972-404 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:338F73B13DAE3282 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:F1FC57B44D7011E9|rigid:Iui/KUGgB1/pgreTW2rhR8VkvmI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:Q03532 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709991|imex:IM-23972-403 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:071860E620C40F92|rigid:qZWyVNF6LQZEFYzgIs7+UkRJn24 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P38112 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709983|imex:IM-23972-402 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) - crc64:69970294E9C980F9 crc64:C4FF2FB5B04FFBF9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 intact-crc:0E43AFD559376626|rigid:2qBQ7uwj4m2C4Sk9wYsXYAALR4g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38112 uniprotkb:P40693 intact:EBI-10394|ensemblfungi:YBR142W|uniprotkb:D6VQD8 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:mak5_yeast(display_long)|uniprotkb:MAK5(gene name)|psi-mi:MAK5(display_short)|uniprotkb:YBR142W(locus name)|uniprotkb:YBR1119(orf name)|uniprotkb:Maintenance of killer protein 5(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10709975|imex:IM-23972-401 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009700.1|sgd:S000000346|interpro:IPR027417|ensemblfungi:YBR142W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|ensemblfungi:YBR142W(gene)|dip:DIP-6337N|mint:P38112|sgd:YBR142W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:C4FF2FB5B04FFBF9 crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oerM/CTbmMuHXitwcQOQvedlnb8559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:066BD8A8D90FF2F6|rigid:s5SyX0yQZDfIBkfepwTmsr4/7wk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P53742 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710111|imex:IM-23972-418 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - crc64:48C3B9AE076B9B8F crc64:D7F670973B85CCEB figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:DF01C7CC282DBEEF|rigid:dvMn45r18/XKfUyoW5Ylh7nxQ8U false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P43586 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710103|imex:IM-23972-417 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:48C3B9AE076B9B8F crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:AD145ED65738ADDA|rigid:It1Pz+JU2zdRV+KPtiTvvVTXa54 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P39744 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710095|imex:IM-23972-416 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:64714DDFAFB90B5D crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:DA8F4E6A57A58079|rigid:GDTGD6S79/dWzGM2oz2PwahFgFc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P39744 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710087|imex:IM-23972-415 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:545C8B4250BCB0C9 crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:C728B06A98E47B96|rigid:cGuZLwgNlK8OQzFDgPua4dLyroQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:P39744 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710079|imex:IM-23972-414 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:48C3B9AE076B9B8F crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:2D25CE67C1CE5DA0|rigid:DdoZ0RMAMIN6tfHbyQl4Us030D0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:Q12389 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710071|imex:IM-23972-413 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:A01D24DE0078FE11 crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:400200DB7B139591|rigid:u7ZVlhvBJBWvvvK1oEqiSqGwmMA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:Q12080 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710063|imex:IM-23972-412 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:A01D24DE0078FE11 crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:427C2B48E2A2C96F|rigid:wnpIOS865k8bk8PtDnHRwj2PRoE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38911 uniprotkb:P43586 intact:EBI-6951|uniprotkb:D6W0K9|ensemblfungi:YML074C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:fkbp3_yeast(display_long)|uniprotkb:YML074C(locus name)|uniprotkb:FPR3(gene name)|psi-mi:FPR3(display_short)|uniprotkb:NPI46(gene name synonym)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Proline rotamase(gene name synonym)|uniprotkb:Nucleolar proline isomerase(gene name synonym)|uniprotkb:FKBP-70(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710055|imex:IM-23972-411 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013637.1|sgd:S000004539|dip:DIP-6578N|ensemblfungi:YML074C(gene)|ensemblfungi:YML074C_mRNA(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0051598"(meiotic recombination checkpoint signaling)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|sgd:YML074C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:A01D24DE0078FE11 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:4xZebf94akWQyMgPLbH6ExNGjoY559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:70A49971570EB1AE|rigid:QbMo1jM56MeqGnmo5vKOQvznbUQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P38805 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-24614|uniprotkb:D3DL40|ensemblfungi:YHR088W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rpf1_yeast(display_long)|uniprotkb:RPF1(gene name)|psi-mi:RPF1(display_short)|uniprotkb:YHR088W(locus name)|uniprotkb:Ribosome biogenesis protein RPF1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710047|imex:IM-23972-410 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_011956.1|sgd:S000001130|dip:DIP-6511N|ensemblfungi:YHR088W(gene)|ensemblfungi:YHR088W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR007109(Brix)|interpro:IPR044281|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YHR088W(identity) - - crc64:EC6EDB2FCE252D4A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:eXTukvlHHu2MFNAgWYgcMyHtC3U559292 intact-crc:0FCB0DAF98ECC546|rigid:G/QJzwRWA508EdxTS20f72MYx7I false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q12080 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710175|imex:IM-23972-426 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:48C3B9AE076B9B8F crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:233274088A517D3B|rigid:Q5HHJ1ZpVQltLvVKpKrpQou5VOg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q08746 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710167|imex:IM-23972-425 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) - crc64:48C3B9AE076B9B8F crc64:7DFF6C51DDD2ADD6 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 intact-crc:2757CACC06E33370|rigid:6tn3zkkgTgpkaUABgQ+9x9N+5Qo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q08287 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-12135|uniprotkb:D6W1S5|ensemblfungi:YOL144W psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop8_yeast(display_long)|uniprotkb:YOL144W(locus name)|uniprotkb:Nucleolar protein 8(gene name synonym)|uniprotkb:NOP8(gene name)|psi-mi:NOP8(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710159|imex:IM-23972-424 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034138|interpro:IPR035979|ensemblfungi:YOL144W(gene)|ensemblfungi:YOL144W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|refseq:NP_014497.1|sgd:S000005504|dip:DIP-4206N|mint:Q08287|sgd:YOL144W(identity) - crc64:48C3B9AE076B9B8F - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:PR7N6gE4Il6ofUCopWK8ztDDVFo559292 intact-crc:2073EA0CEC4891D4|rigid:IS0+2RocHfTwnlLxUqZ2iqv2nfg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q08208 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710151|imex:IM-23972-423 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:48C3B9AE076B9B8F crc64:338F73B13DAE3282 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:84EDDA6F7DFBF30F|rigid:RE9zHn5BjQEQjxDVX1L259mJ1Ic false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q07896 uniprotkb:P39744 intact:EBI-36093|uniprotkb:D6VY04|uniprotkb:Q92280|ensemblfungi:YLR002C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:noc3_yeast(display_long)|uniprotkb:NOC3(gene name)|psi-mi:NOC3(display_short)|uniprotkb:YLR002C(locus name) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710143|imex:IM-23972-422 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013102.1|sgd:S000003992|mint:Q07896|dip:DIP-4839N|ensemblfungi:YLR002C(gene)|ensemblfungi:YLR002C_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005730"(nucleolus)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006364"(rRNA processing)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0051301"(cell division)|interpro:IPR005612(CBF)|interpro:IPR011501(Nucleolar complex-associated)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016903(Nucleolar complex-associated protein 3)|rcsb pdb:6ELZ|rcsb pdb:6EM5|sgd:YLR002C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:4CA9461A4A1F1E9E crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:o4oPtyuw8G9RG5M4XvmbMf7L07E559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:6D9591C0339A6AF2|rigid:4aPkc+FiAhjD7m4yzoY80cM8YEk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P39744 uniprotkb:Q04660 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710135|imex:IM-23972-421 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:48C3B9AE076B9B8F crc64:6542DFE4670341CA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:39888CDC21A5841E|rigid:xRt+dAiHcjbCMRgHJ9EQsAu/NaQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P39744 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710127|imex:IM-23972-420 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:EE15D51A7F6BE1A2 crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:A8252747671DE82B|rigid:lXZavqljqqThd0ya6S9OaiFN6so false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P39744 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710119|imex:IM-23972-419 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:EC86E3C77C863292 crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:0E3160579C5726D8|rigid:KHAXXdrnXmYyr7+L3acKm2DLins false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P53131 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710231|imex:IM-23972-433 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:545C8B4250BCB0C9 crc64:DA8A085EC50FF430 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:62683DA76BFFF879|rigid:ITq6Dx+HfOfFGyPdaE+tMoT92M0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P43586 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710223|imex:IM-23972-432 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:545C8B4250BCB0C9 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:1CA101433261A767|rigid:fL/8ZYc93R+CZaCG+TA3bhcX4u4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P40010 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-22449|uniprotkb:D3DLQ2|ensemblfungi:YER006W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:nug1_yeast(display_long)|uniprotkb:YER006W(locus name)|uniprotkb:NUG1(gene name)|psi-mi:NUG1(display_short)|uniprotkb:Nuclear GTPase 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710215|imex:IM-23972-431 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_010921.1|sgd:S000000808|dip:DIP-6291N|mint:P40010|ensemblfungi:YER006W(gene)|ensemblfungi:YER006W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0015031"(protein transport)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR006073(GTP1/OBG)|interpro:IPR014813(GNL3L/Grn1 putative GTPase)|interpro:IPR023179|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|reactome:R-SCE-6791226|sgd:YER006W(identity) - crc64:69970294E9C980F9 crc64:F75E4860D114756A figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:tbCcXPtanWAfDrM2HMfCH1vb93c559292 intact-crc:061BDA8B61B43FEF|rigid:+GmH9AMVCfp1pZYfLr0XU9pCQ8g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P40007 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710207|imex:IM-23972-430 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) - - crc64:B1D27F0B817AADED figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 intact-crc:6B9C59CB8A630E07|rigid:xc2AFCnv0lGD+r8E0keReGLpPW8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40007 uniprotkb:P43586 intact:EBI-22439|uniprotkb:D3DLP8|ensemblfungi:YER002W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop16_yeast(display_long)|uniprotkb:NOP16(gene name)|psi-mi:NOP16(display_short)|uniprotkb:YER002W(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710199|imex:IM-23972-429 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010917.3|sgd:S000000804|dip:DIP-6555N|mint:P40007|ensemblfungi:YER002W(gene)|ensemblfungi:YER002W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR019002|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|sgd:YER002W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:B1D27F0B817AADED crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PD98kIVFrhy3yk5bcTAz5DxIDaA559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:0544E8534A12EFE8|rigid:TWKlwJrB5CtwetGWuA82e/CUdc8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:P39744 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710191|imex:IM-23972-428 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - crc64:0533013C276095DF crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:BBD92783E47E16D1|rigid:nf63nPZpcuDc3yJ3Eya2p6Bndes false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P39744 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-29259|uniprotkb:Q08625|uniprotkb:D6W2R2|ensemblfungi:YOR206W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:noc2_yeast(display_long)|uniprotkb:YOX001(orf name)|uniprotkb:YOR206W(locus name)|uniprotkb:NOC2(gene name)|psi-mi:NOC2(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710183|imex:IM-23972-427 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_014849.3|sgd:S000005732|dip:DIP-4559N|mint:P39744|ensemblfungi:YOR206W(gene)|ensemblfungi:YOR206W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005739"(mitochondrion)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0030691"(Noc2p-Noc3p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR005343(Protein of unknown function UPF0120)|sgd:YOR206W(identity) - - crc64:48C3B9AE076B9B8F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:d5I8KJOSG63bZ/Pt+XvKdy/SWws559292 intact-crc:DE1E33A0519E7583|rigid:0+ZJyhGZjF090eDo3EQUivh53Ps false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q02892 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710311|imex:IM-23972-443 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - crc64:64714DDFAFB90B5D crc64:640324779AE4D716 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:6E5E4B61BDC65C3C|rigid:TKUwpp93nH0Uyy84BPWO5cTHBbM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P53734 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710303|imex:IM-23972-442 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) - crc64:64714DDFAFB90B5D - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 intact-crc:DC32B43894BC47E8|rigid:Gt8OLlPydrxa/0S6RMZXKW6Mra0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53131 uniprotkb:P40693 intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710295|imex:IM-23972-441 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:DA8A085EC50FF430 crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:5440CA9C474A45AD|rigid:j1afpF8ic+tohzro7vdVwyULaAg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:P40693 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710287|imex:IM-23972-440 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:64714DDFAFB90B5D crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:2D4E4D4372CA851E|rigid:hIMijY0LjMIHKeySqaXFOYNpbm4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12754 uniprotkb:P40078 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710279|imex:IM-23972-439 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:92333BCD53CB095F crc64:545C8B4250BCB0C9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:02678FC9FDDF685A|rigid:GWX9cMXTUmaCXgnKw9Bu7FgvO3M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P40078 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710271|imex:IM-23972-438 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - - crc64:545C8B4250BCB0C9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:D3F1ADCC982BE3B3|rigid:zHWgnP3BQMSRLVhO4ZnDN0EvOjA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:Q03532 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710263|imex:IM-23972-437 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:545C8B4250BCB0C9 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:C75CF71256F3D632|rigid:rQfjrfoZuILlk8GXlHVx4n04fjI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:Q02892 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710255|imex:IM-23972-436 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - crc64:545C8B4250BCB0C9 crc64:640324779AE4D716 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:95A364B8FD6C441B|rigid:6G5PIRTG3M0gvMkMr+rdXHXckHU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P40078 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710247|imex:IM-23972-435 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) - crc64:EC86E3C77C863292 crc64:545C8B4250BCB0C9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 intact-crc:213EAADAE02E2390|rigid:FPnvTpPZe2vIOW2/jInfzl8SXOU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40078 uniprotkb:P53188 intact:EBI-22681|uniprotkb:D3DM32|ensemblfungi:YER126C intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:nsa2_yeast(display_long)|uniprotkb:YER126C(locus name)|uniprotkb:SYGP-ORF47(orf name)|uniprotkb:NSA2(gene name)|psi-mi:NSA2(display_short)|uniprotkb:NOP7-associated protein 2(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710239|imex:IM-23972-434 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011052.1|sgd:S000000928|dip:DIP-1892N|mint:P40078|ensemblfungi:YER126C(gene)|ensemblfungi:YER126C_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR022309|interpro:IPR039411|rcsb pdb:3JCT|rcsb pdb:4WJV|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YER126C(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - crc64:545C8B4250BCB0C9 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ru6dofBbaVkHM+0tunQ4n36y98M559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:58A857B66AF158A0|rigid:HhqQugEkJvLUFll7gUInSCMo+Ck false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q03532 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710383|imex:IM-23972-452 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:69970294E9C980F9 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:F395D0DA641398CE|rigid:YAJ8LiOEHO5c8vCrgW2+3WMw70s false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:P43586 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710375|imex:IM-23972-451 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:640324779AE4D716 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:A365B4E13E01CCB9|rigid:nvo4SiOkap2q5G78N6Drw//pnno false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P53734 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710367|imex:IM-23972-450 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) - crc64:69970294E9C980F9 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 intact-crc:DCA3346C0D566527|rigid:Qpw+C0Xwdpkk02wSAJpWs7fFDcw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P53188 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710359|imex:IM-23972-449 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) - crc64:69970294E9C980F9 - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 intact-crc:5D13CF8AE4DA1AA4|rigid:DIoWr8ZGsQTlchpNnOug/dWhXwM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P53131 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710351|imex:IM-23972-448 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:69970294E9C980F9 crc64:DA8A085EC50FF430 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:0D1E3D3492A4C488|rigid:Nsiw5wrvQmGVWOkdiutbb/U+H3Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:P43586 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710343|imex:IM-23972-447 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:69970294E9C980F9 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:9B1F47FE76AF14E5|rigid:Juk5VDiYyg6lAx/5cZE3847qPCE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P40693 uniprotkb:Q12754 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710335|imex:IM-23972-446 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:64714DDFAFB90B5D crc64:92333BCD53CB095F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:4B62AE1FD4C0433E|rigid:hNUJwwHlMrO2aGmBu3lD2Vdu6rg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P40693 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710327|imex:IM-23972-445 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - - crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:80434566C1C51070|rigid:wgHVy31vG5s9YV3QnJc4TY9MVgw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:P40693 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-15415|uniprotkb:D6W1H5|ensemblfungi:YNL002C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:rlp7_yeast(display_long)|uniprotkb:RPL7(gene name synonym)|uniprotkb:N2014(orf name)|uniprotkb:YNL002C(locus name)|uniprotkb:RLP7(gene name)|psi-mi:RLP7(display_short)|uniprotkb:Ribosomal protein L7-like(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710319|imex:IM-23972-444 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) sgd:S000004947|refseq:NP_014396.3|ensemblfungi:YNL002C(gene)|ensemblfungi:YNL002C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000465"("exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005730"(nucleolus)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042134"(rRNA primary transcript binding)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR016082(Ribosomal protein L30, C-terminal)|interpro:IPR018038|interpro:IPR035808|interpro:IPR036919|interpro:IPR039699|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|dip:DIP-6476N|mint:P40693|sgd:YNL002C(identity) - crc64:EE15D51A7F6BE1A2 crc64:64714DDFAFB90B5D figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:HR8kGX5foVbBQ/nWTKMM16uB3E8559292 intact-crc:EE27F1F6BBF799C7|rigid:5GI/83IGhuUBBJFaQxMZ8D4IJxE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P47108 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710447|imex:IM-23972-460 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - - crc64:7647D48DA557D4D4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:6CE3C868F87570E9|rigid:CC+nNNimoJv+GkUnXviCHzJ1o7k false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q12754 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710439|imex:IM-23972-459 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - crc64:69970294E9C980F9 crc64:92333BCD53CB095F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:A5F6AD3925175EF9|rigid:prLFw/rE+9rzv7b8MeZVu/nQ54g false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q12389 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710431|imex:IM-23972-458 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:69970294E9C980F9 crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:A94833BF1D8F816D|rigid:UuHGVp0kDy95mA6Iu4IPRqXE2Aw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P43586 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710423|imex:IM-23972-457 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - - crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:CBA676EF6D31D76D|rigid:OHoPW7i5pb2ed/ItBhutCNGXgVY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:P43586 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710415|imex:IM-23972-456 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:9B761BB0318EFFC8 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:0CBB678A0B42A902|rigid:lz4xuSffHKcgm4Dec5n/FfMGhmc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08687 uniprotkb:P43586 intact:EBI-34720|uniprotkb:D6W2V3|ensemblfungi:YOR252W intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:tma16_yeast(display_long)|uniprotkb:TMA16(gene name)|psi-mi:TMA16(display_short)|uniprotkb:YOR252W(locus name) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710407|imex:IM-23972-455 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014895.2|sgd:S000005778|mint:Q08687|dip:DIP-4112N|ensemblfungi:YOR252W(gene)|ensemblfungi:YOR252W_mRNA(transcript)|go:"GO:0005634"(nucleus)|interpro:IPR021346|rcsb pdb:2KKM|interpro:IPR038356|sgd:YOR252W(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:8C7C0FF4AD6F5ABA crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:QrhTfqqNOobZ8tvzaTHOPObBxqY559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:18BD99B3817BF78B|rigid:HGqx55f2w122EGSCdkQQ8Jr5pZo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:P43586 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710399|imex:IM-23972-454 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) - crc64:338F73B13DAE3282 crc64:69970294E9C980F9 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 intact-crc:FEBBE37D386F6C35|rigid:yoMa1Bztq9ajcCMjpdj5p6+Fw0M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P43586 uniprotkb:Q06205 intact:EBI-22906|uniprotkb:D6VTN1|ensemblfungi:YFR001W intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:loc1_yeast(display_long)|uniprotkb:YFR001W(locus name)|uniprotkb:LOC1(gene name)|psi-mi:LOC1(display_short)|uniprotkb:Localization of ASH1 mRNA protein 1(gene name synonym) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710391|imex:IM-23972-453 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_116656.1|sgd:S000001897|dip:DIP-6615N|mint:P43586|ensemblfungi:YFR001W(gene)|ensemblfungi:YFR001W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|go:"GO:0050821"(protein stabilization)|go:"GO:0051028"(mRNA transport)|go:"GO:0101031"(chaperone complex)|interpro:IPR037650|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|sgd:YFR001W(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:69970294E9C980F9 crc64:CF90C6714F04572E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:9z0K05pOV8o7bqozFWieGjfs/FM559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:7FF83A0AC414837D|rigid:/ZxSIC4bxrpICNxQxfRXQVVA3hg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:Q08746 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710503|imex:IM-23972-467 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) - - crc64:7DFF6C51DDD2ADD6 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 intact-crc:4A466F8BA791AAFF|rigid:mxuIlIo/1Af02xmcgqYu9XxEtew false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53734 uniprotkb:P53742 intact:EBI-5625|uniprotkb:D6W1L4|ensemblfungi:YNR038W intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:dbp6_yeast(display_long)|uniprotkb:DBP6(gene name)|psi-mi:DBP6(display_short)|uniprotkb:YNR038W(locus name)|uniprotkb:N3302(orf name)|uniprotkb:DEAD box protein 6(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710495|imex:IM-23972-466 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014436.1|sgd:S000005321|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR027417|mint:P53734|ensemblfungi:YNR038W(gene)|ensemblfungi:YNR038W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|sgd:YNR038W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - - crc64:D7F670973B85CCEB figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:uhaxMF80Y3qhNadqbZVjkYbaxlA559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:BCBD411E35540CA2|rigid:VcEhMSGwv+AeKixbXFoq5XlfHh4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53261 uniprotkb:Q04660 intact:EBI-13145|ensemblfungi:YGR103W|uniprotkb:D6VUN5 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C psi-mi:pesc_yeast(display_long)|uniprotkb:NOP7(gene name)|psi-mi:NOP7(display_short)|uniprotkb:YPH1(gene name synonym)|uniprotkb:Nucleolar protein 7(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 13(gene name synonym)|uniprotkb:RRP13(gene name synonym)|uniprotkb:YGR103W(locus name) psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710487|imex:IM-23972-465 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011617.1|sgd:S000003335|ensemblfungi:YGR103W(gene)|ensemblfungi:YGR103W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001357(BRCT)|interpro:IPR010613(Pescadillo, N-terminal)|interpro:IPR036420|rcsb pdb:3JCT|rcsb pdb:5Z3G|mint:P53261|dip:DIP-6326N|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BTB|reactome:R-SCE-6791226|sgd:YGR103W(identity) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) - crc64:131001C956787BE5 crc64:6542DFE4670341CA figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:c+2tmQ08S4VYW9o25XrTj0DEm4c559292 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 intact-crc:09EFA173F169424D|rigid:H4WFEStIt7nf8D3NhLVT7SaRya0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53188 uniprotkb:Q12176 intact:EBI-23731|uniprotkb:D6VUA9|ensemblfungi:YGL029W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:cgr1_yeast(display_long)|uniprotkb:YGL029W(locus name)|uniprotkb:CGR1(gene name)|psi-mi:CGR1(display_short)|uniprotkb:Coiled-coil growth-regulated protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710479|imex:IM-23972-464 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011486.1|sgd:S000002997|dip:DIP-5450N|mint:P53188|ensemblfungi:YGL029W(gene)|ensemblfungi:YGL029W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR005579(Cgr1)|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6YLG|rcsb pdb:6YLH|sgd:YGL029W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - - - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:G7SUf9/XRWXFaYG1LRPoChi6BVA559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:9F6BF9E2110495A7|rigid:uAef9Mlh0HTvUf4JLczxtSQhcDc false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P53131 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-505|ensemblfungi:YGL120C|uniprotkb:D6VU28 psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:prp43_yeast(display_long)|uniprotkb:PRP43(gene name)|psi-mi:PRP43(display_short)|uniprotkb:Helicase JA1(gene name synonym)|uniprotkb:YGL120C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710471|imex:IM-23972-463 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) go:"GO:0071014"(post-mRNA release spliceosomal complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR002464(DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site)|interpro:IPR007502(Helicase-associated region)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR011709(Region of unknown function DUF1605)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR027417|interpro:IPR044756|rcsb pdb:2XAU|rcsb pdb:3KX2|rcsb pdb:5I8Q|rcsb pdb:5JPT|rcsb pdb:5Y88|refseq:NP_011395.1|sgd:S000003088|ensemblfungi:YGL120C(gene)|ensemblfungi:YGL120C_mRNA(transcript)|go:"GO:0000390"(spliceosomal complex disassembly)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0006364"(rRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0042273"(ribosomal large subunit biogenesis)|dip:DIP-5152N|mint:P53131|sgd:YGL120C(identity) - crc64:EC86E3C77C863292 crc64:DA8A085EC50FF430 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:45MX/uTINAjulwkB0vGKeimS+8c559292 intact-crc:015BECCF0A7980E9|rigid:lCTBRCEXPg4UFhh3s3ZgkgVFOM0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12024 uniprotkb:P47108 intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710463|imex:IM-23972-462 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - crc64:DBC26738651433C4 crc64:7647D48DA557D4D4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:584761EB5BACCF44|rigid:9OaWKr/zqCxDOYgyPSdLeidcJxI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05942 uniprotkb:P47108 intact:EBI-33602|uniprotkb:D6VYM1|ensemblfungi:YLR221C intact:EBI-25492|uniprotkb:D6VWL2|ensemblfungi:YJR041C psi-mi:rsa3_yeast(display_long)|uniprotkb:RSA3(gene name)|psi-mi:RSA3(display_short)|uniprotkb:YLR221C(locus name) psi-mi:urb2_yeast(display_long)|uniprotkb:YJR041C(locus name)|uniprotkb:J1622(orf name)|uniprotkb:Unhealthy ribosome biogenesis protein 2(gene name synonym)|uniprotkb:URB2(gene name)|psi-mi:URB2(display_short)|uniprotkb:NPA2(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710455|imex:IM-23972-461 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004211|refseq:NP_013322.1|mint:Q05942|dip:DIP-4421N|ensemblfungi:YLR221C(gene)|ensemblfungi:YLR221C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR028217|sgd:YLR221C(identity) sgd:S000003802|refseq:NP_012575.3|mint:P47108|dip:DIP-6348N|ensemblfungi:YJR041C(gene)|ensemblfungi:YJR041C_mRNA(transcript)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0016072"(rRNA metabolic process)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR018849|sgd:YJR041C(identity) - - crc64:7647D48DA557D4D4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Dz5+x9GLOTdeTL3BQlAv6niUiIs559292 rogid:Mc3Cg6G1mFtKj4yOieHbVvXhR58559292 intact-crc:CDC7DAF583030785|rigid:Si8VjuxMIpHLtiDEE0KZz/Q6LlU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q02892 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710559|imex:IM-23972-474 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - - crc64:640324779AE4D716 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:7FE810F15D038E9F|rigid:JCGdlvibemnxbE5njQuxFodoLZw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:Q02892 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710551|imex:IM-23972-473 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) - crc64:640324779AE4D716 crc64:640324779AE4D716 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 intact-crc:AC171A8D9F517E2B|rigid:zgRTo6s7C7ZshmAZJmW5g6kq7jw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:Q03532 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710543|imex:IM-23972-472 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:EC86E3C77C863292 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:37EEC4EFD3BDA5BD|rigid:9DfV9j7mjpw53APBZzQAqEsQHEk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53927 uniprotkb:P53927 intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C intact:EBI-28853|uniprotkb:D6W171|ensemblfungi:YNL110C psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:nop15_yeast(display_long)|uniprotkb:YNL110C(locus name)|uniprotkb:N1954(orf name)|uniprotkb:Nucleolar protein 15(gene name synonym)|uniprotkb:NOP15(gene name)|psi-mi:NOP15(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710535|imex:IM-23972-471 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) refseq:NP_014289.1|sgd:S000005054|dip:DIP-4741N|mint:P53927|ensemblfungi:YNL110C(gene)|ensemblfungi:YNL110C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034469|interpro:IPR035979|rcsb pdb:3JCT|rcsb pdb:5T9P|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YNL110C(identity) - crc64:EC86E3C77C863292 crc64:EC86E3C77C863292 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 rogid:WHuY5zx7DUsm1G+00Bc6wM8JAJc559292 intact-crc:B7C8F208154189CB|rigid:+W2SToF//sQFqtjm/iRHx84lUBU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:P53742 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710527|imex:IM-23972-470 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - - crc64:D7F670973B85CCEB figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:6ACEC4385132DE46|rigid:M0zpeuN8XbfBI597qA6xPAt5SH4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:P53742 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710519|imex:IM-23972-469 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) - crc64:6542DFE4670341CA crc64:D7F670973B85CCEB figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 intact-crc:BFDA1AB4FED56C74|rigid:btxpiS/0+QReRYi3K23DUWxtqa8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P53742 uniprotkb:Q03532 intact:EBI-28532|uniprotkb:D6W1M8|ensemblfungi:YNR053C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:nog2_yeast(display_long)|uniprotkb:NOG2(gene name)|psi-mi:NOG2(display_short)|uniprotkb:N3484(orf name)|uniprotkb:YNR053C(locus name) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710511|imex:IM-23972-468 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014451.1|sgd:S000005336|dip:DIP-976N|mint:P53742|ensemblfungi:YNR053C(gene)|ensemblfungi:YNR053C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:2000200"(regulation of ribosomal subunit export from nucleus)|interpro:IPR006073(GTP1/OBG)|interpro:IPR012971(NGP1, N-terminal)|interpro:IPR023179|interpro:IPR024929|interpro:IPR027417|interpro:IPR030378|rcsb pdb:3JCT|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:7BT6|rcsb pdb:7BTB|sgd:YNR053C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:D7F670973B85CCEB crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:oWCL90Qd+LFA4SHdZgdz0gtSD0I559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:4F2D0D6E5E1EB22C|rigid:LJdBOUMdHWKC0c1M1p1cT2RN0zw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:Q12389 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710623|imex:IM-23972-482 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:6542DFE4670341CA crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:18FA9208FD538AB9|rigid:k4jD96qWCHOV2JgXl4NoGKXTutE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:Q12024 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-29589|uniprotkb:D6W2X2|ensemblfungi:YOR272W psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:ytm1_yeast(display_long)|uniprotkb:YTM1(gene name)|psi-mi:YTM1(display_short)|uniprotkb:Microtubule-associated protein YTM1(gene name synonym)|uniprotkb:YOR272W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710615|imex:IM-23972-481 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) sgd:S000005798|refseq:NP_014915.3|dip:DIP-6484N|mint:Q12024|ensemblfungi:YOR272W(gene)|ensemblfungi:YOR272W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0051276"(chromosome organization)|go:"GO:0070545"(PeBoW complex)|go:"GO:0110136"(protein-RNA complex remodeling)|interpro:IPR001680(WD40 repeat)|interpro:IPR012972(NLE)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR028599|interpro:IPR036322|rcsb pdb:5DTC|rcsb pdb:6ELZ|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YOR272W(identity) - crc64:6542DFE4670341CA crc64:DBC26738651433C4 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:PMUVUiAOfc1+6wTXaTnBswTOQqk559292 intact-crc:764FEA5CE2081B46|rigid:mzxacRUpVgazbTG3bUBy4C4OJxg false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03862 uniprotkb:Q12080 intact:EBI-31385|uniprotkb:D6VS88|ensemblfungi:YDR101C intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:arx1_yeast(display_long)|uniprotkb:Associated with ribosomal export complex protein 1(gene name synonym)|uniprotkb:ARX1(gene name)|psi-mi:ARX1(display_short)|uniprotkb:YD8557.10c(orf name)|uniprotkb:YDR101C(locus name) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710607|imex:IM-23972-480 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010386.1|sgd:S000002508|dip:DIP-5819N|mint:Q03862|ensemblfungi:YDR101C(gene)|ensemblfungi:YDR101C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0046872"(metal ion binding)|interpro:IPR000994(Peptidase M24, catalytic core)|interpro:IPR036005|interpro:IPR036388|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:4V8T|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5JCS|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6RZZ|rcsb pdb:6YLG|rcsb pdb:6YLH|reactome:R-SCE-6798695|sgd:YDR101C(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:E68A7896FAFA6A0C crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:td4xQ4tAQGk4eK1saQr7x3whlqs559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:D7D0B1504AEEAF43|rigid:r7CmcBvsbiuW2lIu116INJ3SsT0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q12389 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710599|imex:IM-23972-479 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:EE15D51A7F6BE1A2 crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:9B328646A742A06C|rigid:g8eSzxFL/kAT85O6KdCpR/qpztA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q03532 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710591|imex:IM-23972-478 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - - crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:3392F13CCB8BECCC|rigid:vvBIMIW2KRuYtZNYyNIsGGFbAt0 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q04660 uniprotkb:Q03532 intact:EBI-28098|uniprotkb:D6VZM4|ensemblfungi:YMR049C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:erb1_yeast(display_long)|uniprotkb:ERB1(gene name)|psi-mi:ERB1(display_short)|uniprotkb:YMR049C(locus name)|uniprotkb:YM9796.02C(orf name)|uniprotkb:Eukaryotic ribosome biogenesis protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710583|imex:IM-23972-477 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013764.1|sgd:S000004652|dip:DIP-3970N|mint:Q04660|ensemblfungi:YMR049C(gene)|ensemblfungi:YMR049C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043021"(ribonucleoprotein complex binding)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|go:"GO:0070545"(PeBoW complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR012953(BOP1, N-terminal)|interpro:IPR019775|interpro:IPR028598|interpro:IPR036322|rcsb pdb:4U7A|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|reactome:R-SCE-6791226|sgd:YMR049C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:6542DFE4670341CA crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:qqQg/vW0l0B05fAHfj0Ll30nL4o559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:56B9201B1EC2628B|rigid:CF+WOf8msXubRw+x7i7JLowkZOo false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q03532 uniprotkb:Q03532 intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C intact:EBI-8170|uniprotkb:D6W0B7|ensemblfungi:YMR290C psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:has1_yeast(display_long)|uniprotkb:YMR290C(locus name)|uniprotkb:HAS1(gene name)|psi-mi:HAS1(display_short)|uniprotkb:Helicase associated with SET1 protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710575|imex:IM-23972-476 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) refseq:NP_014017.1|sgd:S000004903|mint:Q03532|dip:DIP-4396N|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990417"(snoRNA release from pre-rRNA)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR025313|interpro:IPR027417|interpro:IPR044773|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|rcsb pdb:6EM4|rcsb pdb:6EM5|ensemblfungi:YMR290C(gene)|ensemblfungi:YMR290C_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008186"(ATP-dependent activity, acting on RNA)|go:"GO:0030686"(90S preribosome)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042274"(ribosomal small subunit biogenesis)|sgd:YMR290C(identity) - crc64:EE15D51A7F6BE1A2 crc64:EE15D51A7F6BE1A2 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 rogid:5gSGDwuvbg7Vso4aCQdMZKUQdCI559292 intact-crc:D6399A3A1B7F217E|rigid:9mOyJDfCTZc51dmzdHRhRzqwnZU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q02892 uniprotkb:Q12389 intact:EBI-12105|uniprotkb:D6W3S4|ensemblfungi:YPL093W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:nog1_yeast(display_long)|uniprotkb:LPG15W(orf name)|uniprotkb:YPL093W(locus name)|uniprotkb:NOG1(gene name)|psi-mi:NOG1(display_short) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710567|imex:IM-23972-475 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YPL093W(gene)|ensemblfungi:YPL093W_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0005525"(GTP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR006073(GTP1/OBG)|interpro:IPR010674(Nucleolar GTP-binding 1)|interpro:IPR012973(NOG, C-terminal)|interpro:IPR024926|interpro:IPR027417|interpro:IPR031167|interpro:IPR041623|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5JCS|rcsb pdb:6C0F|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:6EM5|refseq:NP_015232.1|sgd:S000006014|mint:Q02892|dip:DIP-2785N|sgd:YPL093W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:640324779AE4D716 crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:ldS9KDRV01DnkO+7N5Xl5TZZVTI559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:2614816A17C1139A|rigid:0AzKzrYFOlLvcm04OmtgLW2va4M false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06511 uniprotkb:Q12176 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710671|imex:IM-23972-488 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:23E401BB1B82470C - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:E60F2169300BF7B8|rigid:WSctfg8ZJWHpIChbvzb4Ra+WtjI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12153 uniprotkb:Q06511 intact:EBI-18168|uniprotkb:D6VSU1|ensemblfungi:YDR312W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:ssf2_yeast(display_long)|uniprotkb:D9740.2(orf name)|uniprotkb:YDR312W(locus name)|uniprotkb:SSF2(gene name)|psi-mi:SSF2(display_short) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710663|imex:IM-23972-487 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002720|ensemblfungi:YDR312W(gene)|ensemblfungi:YDR312W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR007109(Brix)|refseq:NP_010598.3|dip:DIP-6502N|mint:Q12153|sgd:YDR312W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:83306767C4F58816 crc64:23E401BB1B82470C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:hKo7rUVaRNDF8EntxCIiSPpQ1zM559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:C746AD68AB1F29B2|rigid:/7b2yl2me+r7sJjeOSbisYeLgtk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06511 uniprotkb:Q06511 intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W intact:EBI-34602|uniprotkb:D6W4E0|ensemblfungi:YPR143W psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:rrp15_yeast(display_long)|uniprotkb:RRP15(gene name)|psi-mi:RRP15(display_short)|uniprotkb:YPR143W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710655|imex:IM-23972-486 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) refseq:NP_015469.1|sgd:S000006347|mint:Q06511|dip:DIP-6432N|ensemblfungi:YPR143W(gene)|ensemblfungi:YPR143W_mRNA(transcript)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|interpro:IPR012459(Protein of unknown function DUF1665)|rcsb pdb:6C0F|sgd:YPR143W(identity) - crc64:23E401BB1B82470C crc64:23E401BB1B82470C figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 rogid:InNzRd5TBihvybdGtrBeKRKLte4559292 intact-crc:2AE44CBDE6AE58E1|rigid:zaz+MxEmb/8970RWErBN6N/6T/4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q06205 uniprotkb:Q12080 intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710647|imex:IM-23972-485 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:CF90C6714F04572E crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:2BCB278395B34E86|rigid:A3UAKX8231gGvwbPXK98AcwuXdQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:Q06205 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-6956|uniprotkb:D6VZ83|ensemblfungi:YLR449W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:fkbp4_yeast(display_long)|uniprotkb:FPR4(gene name)|psi-mi:FPR4(display_short)|uniprotkb:YLR449W(locus name)|uniprotkb:L9324.3(orf name)|uniprotkb:Peptidyl-prolyl cis-trans isomerase(gene name synonym)|uniprotkb:Rotamase(gene name synonym)|uniprotkb:Histone proline isomerase(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710639|imex:IM-23972-484 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) sgd:S000004441|refseq:NP_013554.3|dip:DIP-909N|mint:Q06205|ensemblfungi:YLR449W(gene)|ensemblfungi:YLR449W_mRNA(transcript)|go:"GO:0000412"(histone peptidyl-prolyl isomerization)|go:"GO:0000415"(negative regulation of histone H3-K36 methylation)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0005527"(macrolide binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006334"(nucleosome assembly)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR023566|interpro:IPR041232|rcsb pdb:4BF8|sgd:YLR449W(identity) - crc64:338F73B13DAE3282 crc64:CF90C6714F04572E figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:rDmDSGEgRbtgkLBoJTzmzxxY7B4559292 intact-crc:91EA6E7E7E01D9F6|rigid:Mm19rOSWVe3YXMVcPkinndemFGY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q05022 uniprotkb:Q12176 intact:EBI-16011|uniprotkb:D6W054|ensemblfungi:YMR229C intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:rrp5_yeast(display_long)|uniprotkb:RRP5(gene name)|psi-mi:RRP5(display_short)|uniprotkb:FMI1(gene name synonym)|uniprotkb:YMR229C(locus name)|uniprotkb:YM9959.11C(orf name)|uniprotkb:Ribosomal RNA-processing protein 5(gene name synonym)|uniprotkb:U3 small nucleolar RNA-associated protein RRP5(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710631|imex:IM-23972-483 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013956.1|sgd:S000004842|ensemblfungi:YMR229C(gene)|ensemblfungi:YMR229C_mRNA(transcript)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000464"("endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0032040"(small-subunit processome)|go:"GO:0034463"(90S preribosome assembly)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0034512"(box C/D RNA binding)|go:"GO:0034513"(box H/ACA snoRNA binding)|go:"GO:0042134"(rRNA primary transcript binding)|interpro:IPR003029(S1, RNA binding)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR022967|rcsb pdb:5C9S|rcsb pdb:5NLG|rcsb pdb:5WLC|rcsb pdb:5WWM|rcsb pdb:5WYJ|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226|dip:DIP-6535N|mint:Q05022|sgd:YMR229C(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:39BF46E5587B3B0A - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FUIsTk3NLRDu8llnVgX5cDLAbB8559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:715F3E2DEC8CA1A6|rigid:ScY5Qu06tK+aQBk9RNDfa1gdhsk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q12754 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710743|imex:IM-23972-497 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) - - crc64:92333BCD53CB095F figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 intact-crc:9BC073979F3ED757|rigid:8poyWGrhiDCiliG2FUSI0CBPoyA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:Q12176 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710735|imex:IM-23972-496 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - crc64:0533013C276095DF - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:61C61965224CCF57|rigid:rFVeHf6RQ51r7GSIQnBvvyFerVw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q12176 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710727|imex:IM-23972-495 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) - - - figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 intact-crc:C8AEF77EA750E2EB|rigid:n0lqgjd1JeIK9/Egos44TlbjCp4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12754 uniprotkb:Q12080 intact:EBI-30678|uniprotkb:Q7LH12|uniprotkb:D6W400|ensemblfungi:YPL012W intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:rrp12_yeast(display_long)|uniprotkb:RRP12(gene name)|psi-mi:RRP12(display_short)|uniprotkb:YPL012W(locus name) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710719|imex:IM-23972-494 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015313.1|sgd:S000005933|dip:DIP-6497N|mint:Q12754|ensemblfungi:YPL012W(gene)|ensemblfungi:YPL012W_mRNA(transcript)|go:"GO:0000462"("maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0030686"(90S preribosome)|go:"GO:0030688"(preribosome, small subunit precursor)|go:"GO:0042254"(ribosome biogenesis)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR012978(Region of unknown function, NUC173)|interpro:IPR016024(Armadillo-type fold)|sgd:YPL012W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:92333BCD53CB095F crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:RP53JIWBThgT+cJh8AQgdOresC8559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:7D6E67ED129BAFC8|rigid:z2w6t7d2eefiADqY9k9S6hkXXCw false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q12080 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710711|imex:IM-23972-493 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - - crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:1A33F1DB01801763|rigid:gF/Klya+pIY1HZBUsV8b8fbeVQE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12080 uniprotkb:Q12080 intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C intact:EBI-29395|uniprotkb:D6W3M3|ensemblfungi:YPL146C psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:nop53_yeast(display_long)|uniprotkb:YPL146C(locus name)|uniprotkb:LPI2C(orf name)|uniprotkb:P2610(orf name)|uniprotkb:Nucleolar protein 53(gene name synonym)|uniprotkb:NOP53(gene name)|psi-mi:NOP53(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710703|imex:IM-23972-492 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) refseq:NP_015179.1|sgd:S000006067|dip:DIP-993N|mint:Q12080|ensemblfungi:YPL146C(gene)|ensemblfungi:YPL146C_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0019843"(rRNA binding)|interpro:IPR011687(P60-like)|rcsb pdb:3JCT|rcsb pdb:5OOQ|rcsb pdb:6M62|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BTB|sgd:YPL146C(identity) - crc64:9B761BB0318EFFC8 crc64:9B761BB0318EFFC8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 rogid:BF82UgnLblAjZ5CFiBKHpCYS/hI559292 intact-crc:9A198BD0C943D528|rigid:9Tks2UY2hxZTsxRM3nseg3HWgxM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12176 uniprotkb:Q08746 intact:EBI-10944|ensemblfungi:YDR060W|uniprotkb:D6VS46 intact:EBI-16026|uniprotkb:D6W2Z3|ensemblfungi:YOR294W psi-mi:mak21_yeast(display_long)|uniprotkb:MAK21(gene name)|psi-mi:MAK21(display_short)|uniprotkb:YDR060W(locus name)|uniprotkb:D4237(orf name)|uniprotkb:YD9609.14(orf name)|uniprotkb:NOC1(gene name synonym)|uniprotkb:Maintenance of killer protein 21(gene name synonym)|uniprotkb:Nucleolar complex protein 1(gene name synonym) psi-mi:rrs1_yeast(display_long)|uniprotkb:RRS1(gene name)|psi-mi:RRS1(display_short)|uniprotkb:YOR294W(locus name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710695|imex:IM-23972-491 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR060W(gene)|ensemblfungi:YDR060W_mRNA(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0030690"(Noc1p-Noc2p complex)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0042802"(identical protein binding)|interpro:IPR005612(CBF)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR040155|sgd:S000002467|refseq:NP_010345.3|mint:Q12176|dip:DIP-4040N|sgd:YDR060W(identity) ensemblfungi:YOR294W(gene)|refseq:NP_014937.1|sgd:S000005820|ensemblfungi:YOR294W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0034399"(nuclear periphery)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR007023(Ribosomal biogenesis regulatory protein)|rcsb pdb:3JCT|rcsb pdb:5A53|rcsb pdb:5WXL|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:7BT6|rcsb pdb:7BTB|dip:DIP-4081N|mint:Q08746|sgd:YOR294W(identity) - - crc64:7DFF6C51DDD2ADD6 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:Y5IkqRgw551Db48w/pnXZm0AtvQ559292 rogid:JyvCj+ru9yzw4WAhTwy+V5dUdxY559292 intact-crc:E903C2CD3200ACD8|rigid:Mn/N5HYiUUd+j3OWecrPPn2yZFk false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:Q12389 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710687|imex:IM-23972-490 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:338F73B13DAE3282 crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:C93CCC4DE66A58EB|rigid:SvL+y2jN2hDDi/D2LMMG0iQL3Q4 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q08208 uniprotkb:Q08208 intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C intact:EBI-35895|uniprotkb:D6W225|ensemblfungi:YOL041C psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:nop12_yeast(display_long)|uniprotkb:YOL041C(locus name)|uniprotkb:NOP12(gene name)|psi-mi:NOP12(display_short) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710679|imex:IM-23972-489 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) refseq:NP_014601.1|sgd:S000005401|mint:Q08208|dip:DIP-6505N|ensemblfungi:YOL041C(gene)|ensemblfungi:YOL041C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0019843"(rRNA binding)|go:"GO:0030684"(preribosome)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034777|interpro:IPR035979|sgd:YOL041C(identity) - crc64:338F73B13DAE3282 crc64:338F73B13DAE3282 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 rogid:nxUtyFSb/wsDBtlglcMpceE4e4c559292 intact-crc:8BD1B6D64D2A300B|rigid:e1jQpPjZbG221wIGZ4ly0RorCPM false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12522 uniprotkb:Q12522 intact:EBI-9046|ensemblfungi:YPR016C|uniprotkb:D6W426 intact:EBI-9046|ensemblfungi:YPR016C|uniprotkb:D6W426 psi-mi:if6_yeast(display_long)|uniprotkb:TIF6(gene name)|psi-mi:TIF6(display_short)|uniprotkb:CDC95(gene name synonym)|uniprotkb:YPR016C(locus name)|uniprotkb:LPZ15C(orf name) psi-mi:if6_yeast(display_long)|uniprotkb:TIF6(gene name)|psi-mi:TIF6(display_short)|uniprotkb:CDC95(gene name synonym)|uniprotkb:YPR016C(locus name)|uniprotkb:LPZ15C(orf name) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710759|imex:IM-23972-499 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6EM1|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6YLG|ensemblfungi:YPR016C(gene)|ensemblfungi:YPR016C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043022"(ribosome binding)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002769(Translation initiation factor IF6)|rcsb pdb:1G62|rcsb pdb:2X7N|rcsb pdb:3J2I|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5H4P|rcsb pdb:5JCS|rcsb pdb:5T62|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:7BTB|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:6ELZ|refseq:NP_015341.1|sgd:S000006220|mint:Q12522|dip:DIP-5395N|sgd:YPR016C(identity) rcsb pdb:6EM4|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6EM1|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6YLG|ensemblfungi:YPR016C(gene)|ensemblfungi:YPR016C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:0043022"(ribosome binding)|go:"GO:0043023"(ribosomal large subunit binding)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR002769(Translation initiation factor IF6)|rcsb pdb:1G62|rcsb pdb:2X7N|rcsb pdb:3J2I|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:5FL8|rcsb pdb:5H4P|rcsb pdb:5JCS|rcsb pdb:5T62|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:7BTB|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:7BT6|rcsb pdb:6ELZ|refseq:NP_015341.1|sgd:S000006220|mint:Q12522|dip:DIP-5395N|sgd:YPR016C(identity) - crc64:1BCE041C61DFD2A8 crc64:1BCE041C61DFD2A8 figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:FI24/9LOZsCJEfbb7pjCQ+C8i/U559292 rogid:FI24/9LOZsCJEfbb7pjCQ+C8i/U559292 intact-crc:D2A39ED4A8D6899C|rigid:UhBhXQB39tNRRHEp0YSeZmd1U4Y false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q12389 uniprotkb:Q12389 intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W intact:EBI-5644|uniprotkb:D6VRW1|ensemblfungi:YDL031W psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:dbp10_yeast(display_long)|uniprotkb:DBP10(gene name)|psi-mi:DBP10(display_short)|uniprotkb:YDL031W(locus name)|uniprotkb:D2770(orf name)|uniprotkb:DEAD box protein 10(gene name synonym) psi-mi:"MI:1356"(validated two hybrid) McCann et al. (2015) pubmed:25877921|imex:IM-23972 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-10710751|imex:IM-23972-498 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) refseq:NP_010253.2|sgd:S000002189|dip:DIP-6387N|mint:Q12389|ensemblfungi:YDL031W(gene)|ensemblfungi:YDL031W_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000466"("maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0042802"(identical protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902626"(assembly of large subunit precursor of preribosome)|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR012541(DBP10CT)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417|interpro:IPR033517|sgd:YDL031W(identity) - crc64:0533013C276095DF crc64:0533013C276095DF figure legend:Table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2015/03/06 2015/03/18 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 rogid:PHnLvx2Kk2uAkF21YkvqyoJqTWg559292 intact-crc:5EA9B211DECF0982|rigid:+hDHJXgNOxNzjsPSL647Kx+g+3o false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)