#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P74182 uniprotkb:P74182 intact:EBI-9691722|ensemblbacteria:BAA18271 intact:EBI-9691722|ensemblbacteria:BAA18271 psi-mi:p74182_syny3(display_long)|uniprotkb:slr1270(locus name) psi-mi:p74182_syny3(display_long)|uniprotkb:slr1270(locus name) psi-mi:"MI:0071"(molecular sieving) Agarwal et al. (2014) pubmed:25218435|imex:IM-23170 taxid:1111708(syny3)|taxid:1111708("Synechocystis sp. (strain PCC 6803 / Kazusa)") taxid:1111708(syny3)|taxid:1111708("Synechocystis sp. (strain PCC 6803 / Kazusa)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-9691719|imex:IM-23170-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR003423(Outer membrane efflux protein)|ensemblbacteria:BAA18271(gene)|ensemblbacteria:BAA18271(transcript)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding) interpro:IPR003423(Outer membrane efflux protein)|ensemblbacteria:BAA18271(gene)|ensemblbacteria:BAA18271(transcript)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding) - - - figure legend:f3|comment:"Slr1270 fractions purified by Ni-NTA chromatography were pooled and refolded through stepwise dialysis in the presence of 0.1% UDM detergent. The refolded protein, loaded on a Superdex- 200 size exclusion FPLC column, eluted in two peaks at 8.3 mL and 10.7 mL (Fig. 3A), similar to the elution pattern of native E. coli TolC (elution curve in red), supporting correct refolding of the Slr1270. The peak at 8.3 mL corresponds to protein aggregates with Mr > 400 kDa (Fig. 3A). The peak at 10.7 mL contained trimeric Slr1270 protein (Fig. 3A) as it displayed a single band on clear-native PAGE corresponding to a trimer similar to native E. coli TolC (Fig. 3B, lanes 2 and 5). The small difference in migration is consistent with the difference in protein size (Slr1270 monomer ~ 55 kDa; E. coli TolC monomer ~ 50 kDa). However, the Slr1270 protein showed a concentration dependent aggregation (Fig. 3B, lanes 3-4)."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/08/20 2014/10/16 rogid:RS2c5Iby/6asB/KwKbiVtmOPTOg1111708 rogid:RS2c5Iby/6asB/KwKbiVtmOPTOg1111708 intact-crc:1161E0D1A6C77C64|rigid:OwepLonf6UZBpHSQ+We/kvmnDIE false his tag:?-? his tag:?-? - 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P74182 uniprotkb:P74182 intact:EBI-9691722|ensemblbacteria:BAA18271 intact:EBI-9691722|ensemblbacteria:BAA18271 psi-mi:p74182_syny3(display_long)|uniprotkb:slr1270(locus name) psi-mi:p74182_syny3(display_long)|uniprotkb:slr1270(locus name) psi-mi:"MI:0071"(molecular sieving) Agarwal et al. (2014) pubmed:25218435|imex:IM-23170 taxid:1111708(syny3)|taxid:1111708("Synechocystis sp. (strain PCC 6803 / Kazusa)") taxid:1111708(syny3)|taxid:1111708("Synechocystis sp. (strain PCC 6803 / Kazusa)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-9691758|imex:IM-23170-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR003423(Outer membrane efflux protein)|ensemblbacteria:BAA18271(gene)|ensemblbacteria:BAA18271(transcript)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding) interpro:IPR003423(Outer membrane efflux protein)|ensemblbacteria:BAA18271(gene)|ensemblbacteria:BAA18271(transcript)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding) - - - figure legend:f3|comment:"Slr1270 fractions purified by Ni-NTA chromatography were pooled and refolded through stepwise dialysis in the presence of 0.1% UDM detergent. The refolded protein, loaded on a Superdex- 200 size exclusion FPLC column, eluted in two peaks at 8.3 mL and 10.7 mL (Fig. 3A), similar to the elution pattern of native E. coli TolC (elution curve in red), supporting correct refolding of the Slr1270. The peak at 8.3 mL corresponds to protein aggregates with Mr > 400 kDa (Fig. 3A). The peak at 10.7 mL contained trimeric Slr1270 protein (Fig. 3A) as it displayed a single band on clear-native PAGE corresponding to a trimer similar to native E. coli TolC (Fig. 3B, lanes 2 and 5). The small difference in migration is consistent with the difference in protein size (Slr1270 monomer ~ 55 kDa; E. coli TolC monomer ~ 50 kDa). However, the Slr1270 protein showed a concentration dependent aggregation (Fig. 3B, lanes 3-4)."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/08/20 2014/10/16 rogid:RS2c5Iby/6asB/KwKbiVtmOPTOg1111708 rogid:RS2c5Iby/6asB/KwKbiVtmOPTOg1111708 intact-crc:F6695865B29299F0|rigid:1cWRxO2bfz6Fsr05AW1aiYwzV/g false his tag:?-? his tag:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P02930 uniprotkb:P02930 intact:EBI-875614|uniprotkb:Q2M9G5|ensemblbacteria:AAC76071|ensemblbacteria:BAE77091 intact:EBI-875614|uniprotkb:Q2M9G5|ensemblbacteria:AAC76071|ensemblbacteria:BAE77091 psi-mi:tolc_ecoli(display_long)|uniprotkb:tolC(gene name)|psi-mi:tolC(display_short)|uniprotkb:mtcB(gene name synonym)|uniprotkb:mukA(gene name synonym)|uniprotkb:refI(gene name synonym)|uniprotkb:Multidrug efflux pump subunit TolC(gene name synonym)|uniprotkb:Outer membrane factor TolC(gene name synonym)|uniprotkb:colE1-i(gene name synonym)|uniprotkb:toc(gene name synonym)|uniprotkb:weeA(gene name synonym)|uniprotkb:JW5503(locus name)|uniprotkb:b3035(locus name) psi-mi:tolc_ecoli(display_long)|uniprotkb:tolC(gene name)|psi-mi:tolC(display_short)|uniprotkb:mtcB(gene name synonym)|uniprotkb:mukA(gene name synonym)|uniprotkb:refI(gene name synonym)|uniprotkb:Multidrug efflux pump subunit TolC(gene name synonym)|uniprotkb:Outer membrane factor TolC(gene name synonym)|uniprotkb:colE1-i(gene name synonym)|uniprotkb:toc(gene name synonym)|uniprotkb:weeA(gene name synonym)|uniprotkb:JW5503(locus name)|uniprotkb:b3035(locus name) psi-mi:"MI:0071"(molecular sieving) Agarwal et al. (2014) pubmed:25218435|imex:IM-23170 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-9691781|imex:IM-23170-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417507.2|refseq:WP_000735278.1|dip:DIP-11007N|ensemblbacteria:AAC76071(transcript)|ensemblbacteria:b3035(gene)|ensemblbacteria:BAE77091(gene)|ensemblbacteria:BAE77091(transcript)|go:"GO:0005216"(ion channel activity)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042930"(enterobactin transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046677"(response to antibiotic)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:1990196"(MacAB-TolC complex)|go:"GO:1990281"(efflux pump complex)|interpro:IPR003423(Outer membrane efflux protein)|interpro:IPR010130(Type I secretion outer membrane protein, TolC)|rcsb pdb:1EK9|rcsb pdb:1TQQ|rcsb pdb:2VDD|rcsb pdb:2VDE|rcsb pdb:2WMZ|rcsb pdb:2XMN|rcsb pdb:5NG5|rcsb pdb:5NIK|rcsb pdb:5NIL|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:6WXH|rcsb pdb:6WXI refseq:NP_417507.2|refseq:WP_000735278.1|dip:DIP-11007N|ensemblbacteria:AAC76071(transcript)|ensemblbacteria:b3035(gene)|ensemblbacteria:BAE77091(gene)|ensemblbacteria:BAE77091(transcript)|go:"GO:0005216"(ion channel activity)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042930"(enterobactin transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046677"(response to antibiotic)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:1990196"(MacAB-TolC complex)|go:"GO:1990281"(efflux pump complex)|interpro:IPR003423(Outer membrane efflux protein)|interpro:IPR010130(Type I secretion outer membrane protein, TolC)|rcsb pdb:1EK9|rcsb pdb:1TQQ|rcsb pdb:2VDD|rcsb pdb:2VDE|rcsb pdb:2WMZ|rcsb pdb:2XMN|rcsb pdb:5NG5|rcsb pdb:5NIK|rcsb pdb:5NIL|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:6WXH|rcsb pdb:6WXI - - - figure legend:f3a f3c|comment:"Slr1270 fractions purified by Ni-NTA chromatography were pooled and refolded through stepwise dialysis in the presence of 0.1% UDM detergent. The refolded protein, loaded on a Superdex- 200 size exclusion FPLC column, eluted in two peaks at 8.3 mL and 10.7 mL (Fig. 3A), similar to the elution pattern of native E. coli TolC (elution curve in red), supporting correct refolding of the Slr1270. The peak at 8.3 mL corresponds to protein aggregates with Mr > 400 kDa (Fig. 3A). The peak at 10.7 mL contained trimeric Slr1270 protein (Fig. 3A) as it displayed a single band on clear-native PAGE corresponding to a trimer similar to native E. coli TolC (Fig. 3B, lanes 2 and 5). The small difference in migration is consistent with the difference in protein size (Slr1270 monomer ~ 55 kDa; E. coli TolC monomer ~ 50 kDa). However, the Slr1270 protein showed a concentration dependent aggregation (Fig. 3B, lanes 3-4)."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/08/20 2014/10/16 rogid:67LQDsYiAt6tDwigzlhM3Pp5+JA83333 rogid:67LQDsYiAt6tDwigzlhM3Pp5+JA83333 intact-crc:9120BF27295C0E6A|rigid:jYYvtdyJteICiGPMzsrlAL9DGbc false - - 3 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)