#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9M548 uniprotkb:Q9LRZ0 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-7498400|intact:MINT-8375683|ensemblplants:AT3G16830.1 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:tpr2_arath(display_long)|uniprotkb:TPR2(gene name)|psi-mi:TPR2(display_short)|uniprotkb:K20I9.6(orf name)|uniprotkb:At3g16830(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_188306.2|ensemblplants:AT3G16830(gene)|ensemblplants:AT3G16830.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0010072"(primary shoot apical meristem specification)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR006595(CTLH, C-terminal to LisH motif)|interpro:IPR011047(Quinonprotein alcohol dehydrogenase-like)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR027728|interpro:IPR036322|dip:DIP-58586N - - comment:mint figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:OPUZQPx3NjlMyT8ih8PVT8IrwoI3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:Q9ZVD5 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-2352199|uniprotkb:Q93VG2|ensemblplants:AT2G27040.1|ensemblplants:AT2G27040.2 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:ago4_arath(display_long)|uniprotkb:At2g27040(locus name)|uniprotkb:AGO4(gene name)|psi-mi:AGO4(display_short)|uniprotkb:OCP11(gene name synonym)|uniprotkb:Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 11(gene name synonym)|uniprotkb:T20P8.9(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_001189613.1|refseq:NP_565633.1|dip:DIP-53402N|mint:Q9ZVD5|ensemblplants:AT2G27040(gene)|ensemblplants:AT2G27040.1(transcript)|ensemblplants:AT2G27040.2(transcript)|go:"GO:0000791"(euchromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006306"(DNA methylation)|go:"GO:0006342"|go:"GO:0006417"(regulation of translation)|go:"GO:0015030"(Cajal body)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0019048"(modulation by virus of host process)|go:"GO:0030422"(production of siRNA involved in RNA interference)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0035197"(siRNA binding)|go:"GO:0035198"(miRNA binding)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0051567"(histone H3-K9 methylation)|go:"GO:0051607"(defense response to virus)|go:"GO:0070919"(production of siRNA involved in gene silencing by small RNA)|go:"GO:0080188"(gene silencing by RNA-directed DNA methylation)|interpro:IPR003100(Argonaute and Dicer protein, PAZ)|interpro:IPR003165(Stem cell self-renewal protein Piwi)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR014811(Region of unknown function DUF1785)|interpro:IPR032472|interpro:IPR032473|interpro:IPR032474|interpro:IPR036085|interpro:IPR036397 - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:MWChcDa12vBM7yFUwJdFQ5YG51k3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:Q9LZR5 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-3387398|ensemblplants:AT5G03740.1|uniprotkb:Q9M4T4 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:hdt3_arath(display_long)|uniprotkb:HDT3(gene name)|psi-mi:HDT3(display_short)|uniprotkb:HD2C(gene name synonym)|uniprotkb:HD-tuins protein 3(gene name synonym)|uniprotkb:Histone deacetylase 2c(gene name synonym)|uniprotkb:F17C15_160(orf name)|uniprotkb:MED24.1(orf name)|uniprotkb:At5g03740(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N interpro:IPR013087(Zinc finger, C2H2-type/integrase, DNA-binding)|ensemblplants:AT5G03740(gene)|ensemblplants:AT5G03740.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005886"(plasma membrane)|go:"GO:0006325"(chromatin organization)|go:"GO:0009409"(response to cold)|go:"GO:0009414"(response to water deprivation)|go:"GO:0009651"(response to salt stress)|go:"GO:0009737"(response to abscisic acid)|go:"GO:0010162"(seed dormancy process)|go:"GO:0016787"(hydrolase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0046872"(metal ion binding)|refseq:NP_195994.3|interpro:IPR041232 - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:07ukgCbQL1wrxX+vDFk/KlQ5L1U3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:Q84VQ0 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-9661056|uniprotkb:Q56X15|uniprotkb:Q84YI4|ensemblplants:AT5G21150.1 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:ago9_arath(display_long)|uniprotkb:AGO9(gene name)|psi-mi:AGO9(display_short)|uniprotkb:T10F18.180(orf name)|uniprotkb:At5g21150(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_197613.2|interpro:IPR014811(Region of unknown function DUF1785)|interpro:IPR003100(Argonaute and Dicer protein, PAZ)|interpro:IPR003165(Stem cell self-renewal protein Piwi)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR032472|interpro:IPR032474|interpro:IPR036085|interpro:IPR036397|ensemblplants:AT5G21150(gene)|ensemblplants:AT5G21150.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006417"(regulation of translation)|go:"GO:0009554"(megasporogenesis)|go:"GO:0010529"(negative regulation of transposition)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0035197"(siRNA binding)|go:"GO:0048481"(plant ovule development)|go:"GO:0051607"(defense response to virus)|go:"GO:1904159"(megasporocyte differentiation) - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:dcHjqNXDTafEaqwZeakb0mhNMFo3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:O22607 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-9661079|uniprotkb:Q42322|uniprotkb:Q42323|uniprotkb:Q58T21|uniprotkb:Q93VF7|uniprotkb:Q9SLD1|ensemblplants:AT2G19520.1 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:msi4_arath(display_long)|uniprotkb:MSI4(gene name)|psi-mi:MSI4(display_short)|uniprotkb:ACG1(gene name synonym)|uniprotkb:FVE(gene name synonym)|uniprotkb:Altered cold-responsive gene 1 protein(gene name synonym)|uniprotkb:Nucleosome remodeling factor complex component 4(gene name synonym)|uniprotkb:Protein MULTICOPY SUPPRESSOR OF IRA1 4(gene name synonym)|uniprotkb:F3P11.12(orf name)|uniprotkb:At2g19520(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_565456.2|dip:DIP-59614N|ensemblplants:AT2G19520(gene)|ensemblplants:AT2G19520.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0009908"(flower development)|go:"GO:0010224"(response to UV-B)|go:"GO:0030154"(cell differentiation)|go:"GO:0035098"("ESC/E(Z) complex")|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0046872"(metal ion binding)|go:"GO:0048510"(regulation of timing of transition from vegetative to reproductive phase)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|go:"GO:0080182"(histone H3-K4 trimethylation)|go:"GO:0098532"(histone H3-K27 trimethylation)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR022052|interpro:IPR036322 - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:pUZhZElDCHqiaQet8krXitW4w2I3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:Q39255 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-532357|uniprotkb:P92992|ensemblplants:AT1G75950.1 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:skp1a_arath(display_long)|uniprotkb:UFO-binding protein 1(gene name synonym)|uniprotkb:SKP1(gene name synonym)|uniprotkb:UIP1(gene name synonym)|uniprotkb:At1g75950(locus name)|uniprotkb:T4O12.17(orf name)|uniprotkb:SKP1A(gene name)|psi-mi:SKP1A(display_short)|uniprotkb:ASK1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_565123.1|ensemblplants:AT1G75950(gene)|ensemblplants:AT1G75950.1(transcript)|go:"GO:0000226"(microtubule cytoskeleton organization)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0007059"(chromosome segregation)|go:"GO:0009524"(phragmoplast)|go:"GO:0009734"(auxin-activated signaling pathway)|go:"GO:0009873"(ethylene-activated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0045910"(negative regulation of DNA recombination)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0097602"(cullin family protein binding)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:2P1M|rcsb pdb:2P1N|rcsb pdb:2P1O|rcsb pdb:2P1P|rcsb pdb:2P1Q|rcsb pdb:3C6N|rcsb pdb:3C6O|rcsb pdb:3C6P|rcsb pdb:3OGK|rcsb pdb:3OGL|rcsb pdb:3OGM|rcsb pdb:5HYW|rcsb pdb:5HZG|rcsb pdb:6BRO|rcsb pdb:6BRP|rcsb pdb:6BRQ|dip:DIP-31325N - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:rJIhnL8ti1Oj86BKYs2vRakdnXo3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9M548 uniprotkb:O23629 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-9661111|ensemblplants:AT3G45980.1 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:h2b6_arath(display_long)|uniprotkb:H2B(gene name)|psi-mi:H2B(display_short)|uniprotkb:H2BAt(gene name synonym)|uniprotkb:HTB9(gene name synonym)|uniprotkb:F16L2.190(orf name)|uniprotkb:At3g45980(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661129|imex:IM-23006-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_190184.1|interpro:IPR009072(Histone-fold)|interpro:IPR007125(Histone core)|interpro:IPR000558(Histone H2B)|ensemblplants:AT3G45980(gene)|ensemblplants:AT3G45980.1(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0009534"(chloroplast thylakoid)|go:"GO:0009570"(chloroplast stroma)|go:"GO:0046982"(protein heterodimerization activity) - - - figure legend:Fig. 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:oJ6cvWdXv1j++BBZiPAJoYyhVLU3702 intact-crc:6E8954C805C4101A|rigid:OWdHhpAxmBqyuCOZchLH0re4G3M false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) chebi:"CHEBI:45453" uniprotkb:Q76KU6 intact:EBI-9696660 intact:EBI-9637361 psi-mi:sinefungin(display_short)|psi-mi:"CHEBI:45453"(display_long)|intact:"(2S,5S)-2,5-diamino-6-[(2R,3S,R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]hexanoic acid"(synonym)|intact:"6,9-Diamino-1-(6-amino-9H-purin-9-yl)-1,5,6,7,8,9-hexadeoxy-beta-D-ribo-decofuranuronic acid"(synonym)|intact:"6,9-Diamino-1-(6-amino-9H-purin-9-yl)-1,5,6,7,8,9-hexadeoxydecofuranuronic acid"(synonym)|intact:A 9145(synonym)|intact:ADENOSYL-ORNITHINE(synonym)|intact:Antibiotic A 9145(synonym)|intact:sinefungin(synonym)|intact:sinefungina(synonym)|intact:sinefungine(synonym)|intact:sinefunginum(synonym)|intact:"(5S)-5-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-L-norleucine"(iupac name) psi-mi:q76ku6_tobac(display_long)|uniprotkb:NtDRM1(gene name)|psi-mi:NtDRM1(display_short) psi-mi:"MI:0114"(x-ray crystallography) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-9637371|wwpdb:4onj|imex:IM-23006-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - rcsb pdb:4ONJ|rcsb pdb:4ONQ|interpro:IPR030380|interpro:IPR029063|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|refseq:NP_001313186.1|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|go:"GO:0006306"(DNA methylation)|go:"GO:0008168"(methyltransferase activity) - inchi key:LMXOHSDXUQEUSF-YECHIGJVSA-N - 3d-resolution:2.8A|3d-r-factors:Rworking = 0.2 Rfree = 0.22|figure legend:Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/07/04 2014/10/16 - rogid:vD3gUmRyvilUawhxWAXR9v0Pl5E4097 intact-crc:9E458BAEE2E9CAE7 false - sufficient binding region:255-608(IPR029063) 2 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) chebi:"CHEBI:45453" uniprotkb:Q76KU6 intact:EBI-9696660 intact:EBI-9637361 psi-mi:sinefungin(display_short)|psi-mi:"CHEBI:45453"(display_long)|intact:"(2S,5S)-2,5-diamino-6-[(2R,3S,R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]hexanoic acid"(synonym)|intact:"6,9-Diamino-1-(6-amino-9H-purin-9-yl)-1,5,6,7,8,9-hexadeoxy-beta-D-ribo-decofuranuronic acid"(synonym)|intact:"6,9-Diamino-1-(6-amino-9H-purin-9-yl)-1,5,6,7,8,9-hexadeoxydecofuranuronic acid"(synonym)|intact:A 9145(synonym)|intact:ADENOSYL-ORNITHINE(synonym)|intact:Antibiotic A 9145(synonym)|intact:sinefungin(synonym)|intact:sinefungina(synonym)|intact:sinefungine(synonym)|intact:sinefunginum(synonym)|intact:"(5S)-5-amino-6-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]-L-norleucine"(iupac name) psi-mi:q76ku6_tobac(display_long)|uniprotkb:NtDRM1(gene name)|psi-mi:NtDRM1(display_short) psi-mi:"MI:0114"(x-ray crystallography) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-9696677|imex:IM-23006-5|wwpdb:4onq - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - rcsb pdb:4ONJ|rcsb pdb:4ONQ|interpro:IPR030380|interpro:IPR029063|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|refseq:NP_001313186.1|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|go:"GO:0006306"(DNA methylation)|go:"GO:0008168"(methyltransferase activity) - inchi key:LMXOHSDXUQEUSF-YECHIGJVSA-N - 3d-resolution:2.5A|3d-r-factors:Rworking = 0.187 Rfree = 0.23|figure legend:Supp. Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/07/04 2014/10/16 - rogid:vD3gUmRyvilUawhxWAXR9v0Pl5E4097 intact-crc:5AE4031F43DC4E20 false - sufficient binding region:255-608(IPR029063)|mutation:590-591,283-283,309-310 2 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q76KU6 uniprotkb:Q76KU6 intact:EBI-9637361 intact:EBI-9637361 psi-mi:q76ku6_tobac(display_long)|uniprotkb:NtDRM1(gene name)|psi-mi:NtDRM1(display_short) psi-mi:q76ku6_tobac(display_long)|uniprotkb:NtDRM1(gene name)|psi-mi:NtDRM1(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") taxid:4097(tobac)|taxid:4097("Nicotiana tabacum (Common tobacco)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9660671|imex:IM-23006-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:4ONJ|rcsb pdb:4ONQ|interpro:IPR030380|interpro:IPR029063|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|refseq:NP_001313186.1|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|go:"GO:0006306"(DNA methylation)|go:"GO:0008168"(methyltransferase activity) rcsb pdb:4ONJ|rcsb pdb:4ONQ|interpro:IPR030380|interpro:IPR029063|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|refseq:NP_001313186.1|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|go:"GO:0006306"(DNA methylation)|go:"GO:0008168"(methyltransferase activity) - - - figure legend:Fig. 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4100(nicbe-leaf)|taxid:4100(Nicotiana benthamiana leaf) - 2014/07/04 2014/10/16 rogid:vD3gUmRyvilUawhxWAXR9v0Pl5E4097 rogid:vD3gUmRyvilUawhxWAXR9v0Pl5E4097 intact-crc:8BE6E99D28BB4F9F|rigid:W+lHSqHX86wcL0StoBA3plW5sVg false ha tag:?-? flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9M548 uniprotkb:Q9ZVD5 intact:EBI-6923904|ensemblplants:AT5G14620.1|uniprotkb:Q9LYJ7|uniprotkb:Q9LYJ8 intact:EBI-2352199|uniprotkb:Q93VG2|ensemblplants:AT2G27040.1|ensemblplants:AT2G27040.2 psi-mi:drm2_arath(display_long)|uniprotkb:DRM2(gene name)|psi-mi:DRM2(display_short)|uniprotkb:Protein DOMAINS REARRANGED METHYLASE 2(gene name synonym)|uniprotkb:T15N1.110/T15N1.120(orf name)|uniprotkb:At5g14620/At5g14630(locus name) psi-mi:ago4_arath(display_long)|uniprotkb:At2g27040(locus name)|uniprotkb:AGO4(gene name)|psi-mi:AGO4(display_short)|uniprotkb:OCP11(gene name synonym)|uniprotkb:Protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 11(gene name synonym)|uniprotkb:T20P8.9(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Zhong et al. (2014) pubmed:24855943|imex:IM-23006 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-9661164|imex:IM-23006-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G14620(gene)|ensemblplants:AT5G14620.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003886"("DNA (cytosine-5-)-methyltransferase activity")|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006306"(DNA methylation)|go:"GO:0009008"(DNA-methyltransferase activity)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0050832"(defense response to fungus)|go:"GO:0051567"(histone H3-K9 methylation)|interpro:IPR001525(C-5 cytosine-specific DNA methylase)|interpro:IPR009060(UBA-like)|interpro:IPR015940(Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote)|interpro:IPR030380|interpro:IPR029063|refseq:NP_196966.2|dip:DIP-59279N refseq:NP_001189613.1|refseq:NP_565633.1|dip:DIP-53402N|mint:Q9ZVD5|ensemblplants:AT2G27040(gene)|ensemblplants:AT2G27040.1(transcript)|ensemblplants:AT2G27040.2(transcript)|go:"GO:0000791"(euchromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006306"(DNA methylation)|go:"GO:0006342"|go:"GO:0006417"(regulation of translation)|go:"GO:0015030"(Cajal body)|go:"GO:0016458"(obsolete gene silencing)|go:"GO:0019048"(modulation by virus of host process)|go:"GO:0030422"(production of siRNA involved in RNA interference)|go:"GO:0031048"(heterochromatin assembly by small RNA)|go:"GO:0035197"(siRNA binding)|go:"GO:0035198"(miRNA binding)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0051567"(histone H3-K9 methylation)|go:"GO:0051607"(defense response to virus)|go:"GO:0070919"(production of siRNA involved in gene silencing by small RNA)|go:"GO:0080188"(gene silencing by RNA-directed DNA methylation)|interpro:IPR003100(Argonaute and Dicer protein, PAZ)|interpro:IPR003165(Stem cell self-renewal protein Piwi)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR014811(Region of unknown function DUF1785)|interpro:IPR032472|interpro:IPR032473|interpro:IPR032474|interpro:IPR036085|interpro:IPR036397 - - - figure legend:Fig. 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-flower)|taxid:3702(Arabidopsis thaliana flower) - 2014/07/04 2014/10/16 rogid:3KptoF31WNjcCxnLlXEYJ2tSDsU3702 rogid:MWChcDa12vBM7yFUwJdFQ5YG51k3702 intact-crc:57AA14F15A34BA33|rigid:Ar0rRlXqZqS1PueHWbRFk86uQlY false tag:?-?|myc tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)