#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P9WGD5 uniprotkb:P9WMR3 intact:EBI-9081374|uniprotkb:P0A610|uniprotkb:L0T5J5|uniprotkb:P71711 intact:EBI-9081402|uniprotkb:P71715|uniprotkb:L0T2G0 psi-mi:ssb_myctu(display_long)|uniprotkb:ssb(gene name)|psi-mi:ssb(display_short)|uniprotkb:MTCY21D4.17(orf name)|uniprotkb:Rv0054(locus name) psi-mi:dnab_myctu(display_long)|uniprotkb:dnaB(gene name)|psi-mi:dnaB(display_short)|uniprotkb:MTCY21D4.21(orf name)|uniprotkb:Rv0058(locus name) psi-mi:"MI:0018"(two hybrid) - (2014) pubmed:24387047|imex:IM-22036 taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-9081372|imex:IM-22036-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003400534.1|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR000424(Primosome PriB/single-strand DNA-binding)|interpro:IPR011344(Single-strand DNA-binding)|refseq:NP_214568.1|rcsb pdb:1UE1|rcsb pdb:1UE5|rcsb pdb:1UE6|rcsb pdb:1UE7|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005886"(plasma membrane)|go:"GO:0006260"(DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009295"(nucleoid)|go:"GO:0046677"(response to antibiotic)|go:"GO:0051096"(positive regulation of helicase activity) refseq:WP_003916208.1|interpro:IPR030934|interpro:IPR036185|interpro:IPR036844|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR007692(DNA helicase, DnaB type)|interpro:IPR007694(DNA helicase, DnaB-like, C-terminal)|interpro:IPR007693(DNA helicase, DnaB-like, N-terminal)|interpro:IPR016136(DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR027434|interpro:IPR006142(Intein)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR006141(Intein splicing site)|interpro:IPR027417|refseq:NP_214572.1|rcsb pdb:2R5U|interpro:IPR004860(LAGLIDADG DNA endonuclease)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005829"(cytosol)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006269"(DNA replication, synthesis of RNA primer)|go:"GO:0006314"(intron homing)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990077"(primosome complex) - - - figure legend:f4a|comment:"Neither F21L nor N12S/P132L mutations affected the interaction of MtbDnaB and MtbSSB as the co-transformants containing F21L/MtbDnaB. (N12S/P132L)/MtbDnaB grew well on the screening medium. Furthermore, 10 amino acid residues from the SSB C-terminal, which affect the interaction between PriA and SSB in E. coli, were deleted from MtbSSB. Co-transformants containing SSBΔ10/MtbDnaB also grew well on the screening medium, but no growth was found when 20 amino acid residues were deleted from the MtbSSB C-terminal. This result suggests that the key interaction sites in MtbSSB are within the next 10 amino acid residues. These results also demonstrate specific interaction between MtbDnaB and MtbSSB."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2014/01/12 2014/10/16 rogid:QegccGgxAsJfI5pHPQQ5pfN9luw83332 rogid:pyeT8wgrFMnS16YxrLRlceMqLwA83332 intact-crc:4D073F006AB296E0|rigid:FYkaZlUvWidSuv/B3UXLgsBVOT8 false binding-associated region:144-154 fusion protein:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P9WGD5 uniprotkb:P9WMR3 intact:EBI-9081374|uniprotkb:P0A610|uniprotkb:L0T5J5|uniprotkb:P71711 intact:EBI-9081402|uniprotkb:P71715|uniprotkb:L0T2G0 psi-mi:ssb_myctu(display_long)|uniprotkb:ssb(gene name)|psi-mi:ssb(display_short)|uniprotkb:MTCY21D4.17(orf name)|uniprotkb:Rv0054(locus name) psi-mi:dnab_myctu(display_long)|uniprotkb:dnaB(gene name)|psi-mi:dnaB(display_short)|uniprotkb:MTCY21D4.21(orf name)|uniprotkb:Rv0058(locus name) psi-mi:"MI:0107"(surface plasmon resonance) - (2014) pubmed:24387047|imex:IM-22036 taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-9081455|imex:IM-22036-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003400534.1|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR000424(Primosome PriB/single-strand DNA-binding)|interpro:IPR011344(Single-strand DNA-binding)|refseq:NP_214568.1|rcsb pdb:1UE1|rcsb pdb:1UE5|rcsb pdb:1UE6|rcsb pdb:1UE7|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005886"(plasma membrane)|go:"GO:0006260"(DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009295"(nucleoid)|go:"GO:0046677"(response to antibiotic)|go:"GO:0051096"(positive regulation of helicase activity) refseq:WP_003916208.1|interpro:IPR030934|interpro:IPR036185|interpro:IPR036844|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR007692(DNA helicase, DnaB type)|interpro:IPR007694(DNA helicase, DnaB-like, C-terminal)|interpro:IPR007693(DNA helicase, DnaB-like, N-terminal)|interpro:IPR016136(DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR027434|interpro:IPR006142(Intein)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR006141(Intein splicing site)|interpro:IPR027417|refseq:NP_214572.1|rcsb pdb:2R5U|interpro:IPR004860(LAGLIDADG DNA endonuclease)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005829"(cytosol)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006269"(DNA replication, synthesis of RNA primer)|go:"GO:0006314"(intron homing)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990077"(primosome complex) - - - figure legend:f4b|comment:"The interaction of MtbDnaB with MtbSSB was further confirmed by surface plasmon resonance (SPR) assay. His-tagged MtbDnaB proteins were first immobilized on a nitrilotriacetate chip. As shown in Fig. 4B, significant responses of approximately 140 and 250 response units (RU) were found when increasing amounts of 30 and 60 nM GST-tagged MtbDnaB protein were passed over the chip, respectively (Fig. 4B, left panel). Similar results were also observed for the interaction of F21L, N12S/P132L, or SSBΔC10 with MtbDnaB, but a smaller response (48 RU) was observed when SSBΔC20 was passed over the chip (Fig. 4B, right panel). No response was observed for GST alone or GST-1505c."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2014/01/12 2014/10/16 rogid:QegccGgxAsJfI5pHPQQ5pfN9luw83332 rogid:pyeT8wgrFMnS16YxrLRlceMqLwA83332 intact-crc:10CEAB8432138096|rigid:FYkaZlUvWidSuv/B3UXLgsBVOT8 false binding-associated region:144-154|glutathione s tranferase tag:?-? his tag:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P9WMR3 uniprotkb:P9WGD5 intact:EBI-9081402|uniprotkb:P71715|uniprotkb:L0T2G0 intact:EBI-9081374|uniprotkb:P0A610|uniprotkb:L0T5J5|uniprotkb:P71711 psi-mi:dnab_myctu(display_long)|uniprotkb:dnaB(gene name)|psi-mi:dnaB(display_short)|uniprotkb:MTCY21D4.21(orf name)|uniprotkb:Rv0058(locus name) psi-mi:ssb_myctu(display_long)|uniprotkb:ssb(gene name)|psi-mi:ssb(display_short)|uniprotkb:MTCY21D4.17(orf name)|uniprotkb:Rv0054(locus name) psi-mi:"MI:0030"(cross-linking study) - (2014) pubmed:24387047|imex:IM-22036 taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") taxid:83332(myctu)|taxid:83332("Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-9081474|imex:IM-22036-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003916208.1|interpro:IPR030934|interpro:IPR036185|interpro:IPR036844|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR007692(DNA helicase, DnaB type)|interpro:IPR007694(DNA helicase, DnaB-like, C-terminal)|interpro:IPR007693(DNA helicase, DnaB-like, N-terminal)|interpro:IPR016136(DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal)|interpro:IPR003586(Hedgehog/intein hint domain, C-terminal)|interpro:IPR003587(Hedgehog/intein hint, N-terminal)|interpro:IPR027434|interpro:IPR006142(Intein)|interpro:IPR004042(Intein DOD homing endonuclease)|interpro:IPR006141(Intein splicing site)|interpro:IPR027417|refseq:NP_214572.1|rcsb pdb:2R5U|interpro:IPR004860(LAGLIDADG DNA endonuclease)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0004519"(endonuclease activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005829"(cytosol)|go:"GO:0006268"(DNA unwinding involved in DNA replication)|go:"GO:0006269"(DNA replication, synthesis of RNA primer)|go:"GO:0006314"(intron homing)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0016539"(intein-mediated protein splicing)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1990077"(primosome complex) refseq:WP_003400534.1|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR000424(Primosome PriB/single-strand DNA-binding)|interpro:IPR011344(Single-strand DNA-binding)|refseq:NP_214568.1|rcsb pdb:1UE1|rcsb pdb:1UE5|rcsb pdb:1UE6|rcsb pdb:1UE7|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005886"(plasma membrane)|go:"GO:0006260"(DNA replication)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009295"(nucleoid)|go:"GO:0046677"(response to antibiotic)|go:"GO:0051096"(positive regulation of helicase activity) - - - figure legend:f4c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:410289(mycbp)|taxid:410289(mycbp) - 2014/01/12 2014/10/16 rogid:pyeT8wgrFMnS16YxrLRlceMqLwA83332 rogid:QegccGgxAsJfI5pHPQQ5pfN9luw83332 intact-crc:830ADE34D1FBA3A3|rigid:FYkaZlUvWidSuv/B3UXLgsBVOT8 false his tag:?-? his tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)