#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P0C0V0 uniprotkb:P0A917 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-552413|uniprotkb:P36546|ensemblbacteria:AAC73901|ensemblbacteria:BAA35486 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompx_ecoli(display_long)|uniprotkb:ompX(gene name)|psi-mi:ompX(display_short)|uniprotkb:b0814(locus name)|uniprotkb:ybiG(gene name synonym)|uniprotkb:JW0799(locus name) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_415335.1|refseq:WP_001295296.1|dip:DIP-48016N|ensemblbacteria:AAC73901(transcript)|ensemblbacteria:b0814(gene)|ensemblbacteria:BAA35486(gene)|ensemblbacteria:BAA35486(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0044384"(host outer membrane)|interpro:IPR000758(Virulence-related outer membrane protein)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR027385|rcsb pdb:1ORM|rcsb pdb:1Q9F|rcsb pdb:1Q9G|rcsb pdb:1QJ8|rcsb pdb:1QJ9|rcsb pdb:2M06|rcsb pdb:2M07|rcsb pdb:2MNH - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:iddkfgq0JqBtPnuThwAAn8nfm0A83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P21420 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-9073123|uniprotkb:P77189 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:nmpc_ecoli(display_long)|uniprotkb:nmpC(gene name)|psi-mi:nmpC(display_short)|uniprotkb:phmA(gene name synonym)|uniprotkb:b0553(locus name) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N interpro:IPR023614|interpro:IPR001897(Porin, bacterial type)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR033900|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0046930"(pore complex) - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:pcDXSA+iu4A3T0cE31JBlis/FDY83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P02931 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371336|ensemblbacteria:AAC74015|ensemblbacteria:BAA35675 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompf_ecoli(display_long)|uniprotkb:ompF(gene name)|psi-mi:ompF(display_short)|uniprotkb:cmlB(gene name synonym)|uniprotkb:tolF(gene name synonym)|uniprotkb:coa(gene name synonym)|uniprotkb:cry(gene name synonym)|uniprotkb:Porin OmpF(gene name synonym)|uniprotkb:Outer membrane protein 1A(gene name synonym)|uniprotkb:Outer membrane protein IA(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:b0929(locus name)|uniprotkb:JW0912(locus name)|uniprotkb:Outer membrane protein F(gene name synonym) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000977920.1|refseq:NP_415449.1|rcsb pdb:4D5U|rcsb pdb:4GCP|rcsb pdb:4GCQ|rcsb pdb:4GCS|rcsb pdb:4JFB|rcsb pdb:4LSE|rcsb pdb:4LSF|rcsb pdb:4LSH|rcsb pdb:4LSI|rcsb pdb:5NUO|rcsb pdb:5NUQ|rcsb pdb:3POX|rcsb pdb:5NUR|rcsb pdb:6WTZ|rcsb pdb:6ZHP|rcsb pdb:6ZHV|ensemblbacteria:AAC74015(transcript)|ensemblbacteria:b0929(gene)|ensemblbacteria:BAA35675(gene)|ensemblbacteria:BAA35675(transcript)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0005216"(ion channel activity)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0034702"(ion channel complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042912"(colicin transmembrane transporter activity)|go:"GO:0046930"(pore complex)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|interpro:IPR033900|rcsb pdb:1GFM|rcsb pdb:1GFN|rcsb pdb:1GFO|rcsb pdb:1GFP|rcsb pdb:1GFQ|rcsb pdb:1HXT|rcsb pdb:1HXU|rcsb pdb:1HXX|rcsb pdb:1MPF|rcsb pdb:1OPF|rcsb pdb:2OMF|rcsb pdb:2ZFG|rcsb pdb:2ZLD|rcsb pdb:3FYX|rcsb pdb:3HW9|rcsb pdb:3HWB|rcsb pdb:3K19|rcsb pdb:3K1B|rcsb pdb:3O0E|rcsb pdb:3POQ|rcsb pdb:3POU|rcsb pdb:1BT9|dip:DIP-10398N - - crc64:3F0974D96DB65464 figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:XBV4vmVyGY7JXC71Uk2YGec4H+c83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P0A910 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P0A915 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P45523 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-550304|uniprotkb:Q2M712|uniprotkb:P39175|ensemblbacteria:AAC76372|ensemblbacteria:BAE77944 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:fkba_ecoli(display_long)|uniprotkb:fkpA(gene name)|psi-mi:fkpA(display_short)|uniprotkb:b3347(locus name)|uniprotkb:JW3309(locus name)|uniprotkb:yzzS(gene name synonym)|uniprotkb:Rotamase(gene name synonym) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_417806.1|refseq:WP_000838250.1|dip:DIP-9625N|ensemblbacteria:AAC76372(transcript)|ensemblbacteria:b3347(gene)|ensemblbacteria:BAE77944(gene)|ensemblbacteria:BAE77944(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042026"(protein refolding)|interpro:IPR000774(Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal)|interpro:IPR001179(Peptidyl-prolyl cis-trans isomerase, FKBP-type)|interpro:IPR036944|rcsb pdb:1Q6H|rcsb pdb:1Q6I|rcsb pdb:1Q6U|rcsb pdb:4QCC - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:BR1LEdU/+/Mv8IS1hOQZ5nHaMlM83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P0AEX9 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-369910|uniprotkb:P02928|uniprotkb:Q2M6S0|ensemblbacteria:AAC77004|ensemblbacteria:BAE78036 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:male_ecoli(display_long)|uniprotkb:malE(gene name)|psi-mi:malE(display_short)|uniprotkb:MMBP(gene name synonym)|uniprotkb:Maltodextrin-binding protein(gene name synonym)|uniprotkb:Maltose-binding protein(gene name synonym)|uniprotkb:JW3994(locus name)|uniprotkb:b4034(locus name) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N ensemblbacteria:AAC77004(transcript)|ensemblbacteria:b4034(gene)|ensemblbacteria:BAE78036(gene)|ensemblbacteria:BAE78036(transcript)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0008643"(carbohydrate transport)|go:"GO:0015144"(carbohydrate transmembrane transporter activity)|go:"GO:0015768"(maltose transport)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|refseq:NP_418458.1|rcsb pdb:2N45|rcsb pdb:2NVU|rcsb pdb:2OBG|rcsb pdb:2OK2|rcsb pdb:2R6G|rcsb pdb:2V93|rcsb pdb:2VGQ|rcsb pdb:2XZ3|rcsb pdb:2ZXT|rcsb pdb:3A3C|rcsb pdb:3C4M|rcsb pdb:3CSB|rcsb pdb:3CSG|rcsb pdb:3D4C|rcsb pdb:3D4G|rcsb pdb:3DM0|rcsb pdb:3EF7|rcsb pdb:3EHS|rcsb pdb:3EHT|rcsb pdb:3EHU|rcsb pdb:3F5F|go:"GO:0034289"(detection of maltose stimulus)|go:"GO:0043190"("ATP-binding cassette (ABC) transporter complex")|go:"GO:0055052"("ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing")|go:"GO:0060326"(cell chemotaxis)|go:"GO:1901982"(maltose binding)|interpro:IPR006059(Bacterial extracellular solute-binding, family 1)|interpro:IPR006060(Maltose binding protein)|interpro:IPR006061(Bacterial extracellular solute-binding family 1, conserved site)|rcsb pdb:1A7L|rcsb pdb:1ANF|rcsb pdb:1DMB|rcsb pdb:1EZ9|rcsb pdb:1EZO|rcsb pdb:1EZP|rcsb pdb:1FQA|rcsb pdb:1FQB|rcsb pdb:1FQC|rcsb pdb:1FQD|rcsb pdb:1HSJ|rcsb pdb:1IUD|rcsb pdb:1JVX|rcsb pdb:1JVY|rcsb pdb:1JW4|go:"GO:0042597"(periplasmic space)|go:"GO:0042956"(maltodextrin transport)|rcsb pdb:1JW5|rcsb pdb:1LAX|rcsb pdb:1LLS|rcsb pdb:1MDP|rcsb pdb:1MDQ|rcsb pdb:1MG1|rcsb pdb:1MH3|rcsb pdb:1MH4|rcsb pdb:1MPB|rcsb pdb:1MPC|rcsb pdb:1MPD|rcsb pdb:1N3W|rcsb pdb:1N3X|rcsb pdb:1NL5|rcsb pdb:1NMU|rcsb pdb:1OMP|rcsb pdb:1PEB|rcsb pdb:1R6Z|rcsb pdb:1SVX|rcsb pdb:1T0K|rcsb pdb:1Y4C|rcsb pdb:1YTV|rcsb pdb:1ZIU|rcsb pdb:1ZJL|rcsb pdb:1ZKB|rcsb pdb:1ZMG|rcsb pdb:2D21|rcsb pdb:2H25|rcsb pdb:2KLF|rcsb pdb:2MV0|rcsb pdb:2N44|rcsb pdb:3G7V|rcsb pdb:3G7W|rcsb pdb:3H3G|rcsb pdb:3H4Z|rcsb pdb:3HPI|rcsb pdb:3HST|rcsb pdb:3IO6|rcsb pdb:3IOR|rcsb pdb:3IOT|rcsb pdb:3IOU|rcsb pdb:3IOV|rcsb pdb:3IOW|rcsb pdb:3J9P|rcsb pdb:3KJT|rcsb pdb:3L2J|rcsb pdb:3LBS|rcsb pdb:3LC8|rcsb pdb:3MBP|rcsb pdb:3MP1|rcsb pdb:3IO4|rcsb pdb:3MP6|rcsb pdb:3MP8|rcsb pdb:3MQ9|rcsb pdb:3N93|rcsb pdb:3N94|rcsb pdb:4FEC|rcsb pdb:4FED|rcsb pdb:4GIZ|rcsb pdb:4GLI|rcsb pdb:4IFP|rcsb pdb:4FEB|rcsb pdb:4IKM|rcsb pdb:4IRL|rcsb pdb:4JBZ|rcsb pdb:4JKM|rcsb pdb:4KEG|rcsb pdb:4KHZ|rcsb pdb:4KI0|rcsb pdb:4KV3|rcsb pdb:4KYC|rcsb pdb:4KYD|rcsb pdb:4KYE|rcsb pdb:4LOG|rcsb pdb:4MBP|rcsb pdb:4N4X|rcsb pdb:4NDZ|rcsb pdb:4NUF|rcsb pdb:4O2X|rcsb pdb:4OGM|rcsb pdb:4PE2|rcsb pdb:4PQK|rcsb pdb:4QSZ|rcsb pdb:4QVH|rcsb pdb:3N95|rcsb pdb:3N96|rcsb pdb:3O3U|rcsb pdb:3OAI|rcsb pdb:3OB4|rcsb pdb:3OSQ|rcsb pdb:3OSR|rcsb pdb:3PGF|rcsb pdb:3PUV|rcsb pdb:3PUW|rcsb pdb:3PUX|rcsb pdb:3PUY|rcsb pdb:3PUZ|rcsb pdb:3PV0|rcsb pdb:3PY7|rcsb pdb:3Q25|rcsb pdb:3Q26|rcsb pdb:3Q27|rcsb pdb:3Q28|rcsb pdb:3Q29|rcsb pdb:3RLF|rcsb pdb:3RUM|rcsb pdb:3SER|rcsb pdb:3SES|rcsb pdb:3SET|rcsb pdb:3SEU|rcsb pdb:3SEV|rcsb pdb:3SEW|rcsb pdb:3SEX|rcsb pdb:3SEY|rcsb pdb:3VFJ|rcsb pdb:3W15|rcsb pdb:3WAI|rcsb pdb:3WOA|rcsb pdb:4B3N|rcsb pdb:4BL8|rcsb pdb:4BL9|rcsb pdb:4BLA|rcsb pdb:4BLB|rcsb pdb:4BLD|rcsb pdb:4DXB|rcsb pdb:4DXC|rcsb pdb:4EDQ|rcsb pdb:4EGC|rcsb pdb:4EXK|rcsb pdb:4FE8|refseq:WP_000695387.1|rcsb pdb:4R0Y|rcsb pdb:4RG5|rcsb pdb:4RWF|rcsb pdb:4RWG|rcsb pdb:4TSM|rcsb pdb:4WJV|rcsb pdb:4WMS|rcsb pdb:4WMT|rcsb pdb:4WMU|rcsb pdb:4WMV|rcsb pdb:4WMW|rcsb pdb:4WMX|rcsb pdb:4WRN|rcsb pdb:4WTH|rcsb pdb:4WVH|rcsb pdb:4XA2|rcsb pdb:4XAJ|rcsb pdb:4XHS|rcsb pdb:4XR8|rcsb pdb:4XZS|rcsb pdb:4XZV|rcsb pdb:5AQ9|rcsb pdb:5AZ6|rcsb pdb:5AZ7|rcsb pdb:5AZ8|rcsb pdb:5AZ9|rcsb pdb:5AZA|rcsb pdb:5B3W|rcsb pdb:5B3X|rcsb pdb:5B3Y|rcsb pdb:5B3Z|rcsb pdb:5BK1|rcsb pdb:5BK2|rcsb pdb:5C7R|rcsb pdb:5CBN|rcsb pdb:5CFV|rcsb pdb:5DFM|rcsb pdb:5DIS|rcsb pdb:5E24|rcsb pdb:5E7U|rcsb pdb:5EDU|rcsb pdb:5FIO|rcsb pdb:5FSG|rcsb pdb:5GRU|rcsb pdb:5GS2|rcsb pdb:5GXT|rcsb pdb:5GXV|rcsb pdb:5H7N|rcsb pdb:5H7Q|rcsb pdb:5HZ7|rcsb pdb:5HZV|rcsb pdb:5HZW|rcsb pdb:5I04|rcsb pdb:5I69|rcsb pdb:5IHJ|rcsb pdb:5II5|rcsb pdb:5IIC|rcsb pdb:5IQZ|rcsb pdb:5JJ4|rcsb pdb:5JST|rcsb pdb:5JTQ|rcsb pdb:5JTR|rcsb pdb:5LDF|rcsb pdb:5M13|rcsb pdb:5M14|rcsb pdb:5M15|rcsb pdb:5MM3|rcsb pdb:5OSQ|rcsb pdb:5T03|rcsb pdb:5T05|rcsb pdb:5T0A|rcsb pdb:5TTD|rcsb pdb:5VAW|rcsb pdb:5WPZ|rcsb pdb:5WQ6|rcsb pdb:5Y2G|rcsb pdb:5YGP|rcsb pdb:5YGS|rcsb pdb:5Z0R|rcsb pdb:5Z0V|rcsb pdb:5ZCA|rcsb pdb:5ZNY|rcsb pdb:5ZNZ|rcsb pdb:5ZR0|rcsb pdb:6APX|rcsb pdb:6CXS|rcsb pdb:6D65|rcsb pdb:6D66|rcsb pdb:6D67|rcsb pdb:6DM8|rcsb pdb:6EQZ|rcsb pdb:6HD8|rcsb pdb:6HD9|rcsb pdb:6HDA|rcsb pdb:6HDB|rcsb pdb:6HDC|rcsb pdb:6I4Y|rcsb pdb:6K7D|rcsb pdb:6K7E|rcsb pdb:6K7F|rcsb pdb:6KEA|rcsb pdb:6KI0|rcsb pdb:6KXG|rcsb pdb:6LES|rcsb pdb:6LF3|rcsb pdb:6M4V|rcsb pdb:6M4W|rcsb pdb:6N84|rcsb pdb:6NDJ|rcsb pdb:6OB5|rcsb pdb:6P6W|rcsb pdb:6QUG|rcsb pdb:6QYK|rcsb pdb:6QYL|rcsb pdb:6QYN|rcsb pdb:6QYO|rcsb pdb:6QZ7|rcsb pdb:6SIV|rcsb pdb:6SJA|rcsb pdb:6SLM|rcsb pdb:6SMV|rcsb pdb:6SWR|rcsb pdb:6TZC|rcsb pdb:6V2E|rcsb pdb:6VLS|rcsb pdb:6WBH|rcsb pdb:6WBJ|rcsb pdb:6XDS|rcsb pdb:6XRX|rcsb pdb:6YBJ|rcsb pdb:6YBK|rcsb pdb:6YBL|rcsb pdb:6YSN|rcsb pdb:6ZHO|rcsb pdb:7BXT|rcsb pdb:7BY0|rcsb pdb:7JTR|rcsb pdb:7K48|dip:DIP-31871N - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:eRW6SNukWqn5RNc2mgN4yOfxK3k83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0C0V0 uniprotkb:P06996 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371155|ensemblbacteria:AAC75275|ensemblbacteria:BAA15998 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompc_ecoli(display_long)|uniprotkb:ompC(gene name)|psi-mi:ompC(display_short)|uniprotkb:meoA(gene name synonym)|uniprotkb:par(gene name synonym)|uniprotkb:b2215(locus name)|uniprotkb:Outer membrane protein 1B(gene name synonym)|uniprotkb:JW2203(locus name)|uniprotkb:Porin OmpC(gene name synonym)|uniprotkb:Outer membrane protein C(gene name synonym) psi-mi:"MI:0030"(cross-linking study) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9073099|imex:IM-22035-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_416719.1|refseq:WP_000865568.1|ensemblbacteria:AAC75275(transcript)|ensemblbacteria:b2215(gene)|ensemblbacteria:BAA15998(gene)|ensemblbacteria:BAA15998(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0015914"(phospholipid transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046813"(receptor-mediated virion attachment to host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0046930"(pore complex)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|rcsb pdb:2J1N|rcsb pdb:2J4U|rcsb pdb:2ZLE|rcsb pdb:4A8D|mint:P06996|dip:DIP-10397N - - - figure legend:f1 sf3 t1|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:fCjcjMFeGIrilHAn6h+yju267lg83333 intact-crc:31CA335201808982|rigid:WrPtKXp0cZluEKIDdJFycGHvWn8 false his tag:?-? - - - psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) psi-mi:"MI:0032"(de novo protein sequencing by mass spectrometry) uniprotkb:P0A910 uniprotkb:P0C0V0 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-9078873|imex:IM-22035-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N - - - figure legend:f2d sf4c|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 intact-crc:E01214B92B63FD5C|rigid:uCvgiW/kFagIq1LRH9ZTcQ+10f4 false binding-associated region:27-190|ha tag:?-? his tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P0A910 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9078859|imex:IM-22035-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N - - - figure legend:f2c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 intact-crc:1CB8D0A65E907278|rigid:peyQxDbpEoGePtPxTmDqdHgEPUo false his tag:?-?|mutation increasing interaction:209-209 ha tag:?-?|binding-associated region:27-190 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P06996 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371155|ensemblbacteria:AAC75275|ensemblbacteria:BAA15998 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompc_ecoli(display_long)|uniprotkb:ompC(gene name)|psi-mi:ompC(display_short)|uniprotkb:meoA(gene name synonym)|uniprotkb:par(gene name synonym)|uniprotkb:b2215(locus name)|uniprotkb:Outer membrane protein 1B(gene name synonym)|uniprotkb:JW2203(locus name)|uniprotkb:Porin OmpC(gene name synonym)|uniprotkb:Outer membrane protein C(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9078859|imex:IM-22035-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_416719.1|refseq:WP_000865568.1|ensemblbacteria:AAC75275(transcript)|ensemblbacteria:b2215(gene)|ensemblbacteria:BAA15998(gene)|ensemblbacteria:BAA15998(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0015914"(phospholipid transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046813"(receptor-mediated virion attachment to host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0046930"(pore complex)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|rcsb pdb:2J1N|rcsb pdb:2J4U|rcsb pdb:2ZLE|rcsb pdb:4A8D|mint:P06996|dip:DIP-10397N - - - figure legend:f2c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:fCjcjMFeGIrilHAn6h+yju267lg83333 intact-crc:1CB8D0A65E907278|rigid:peyQxDbpEoGePtPxTmDqdHgEPUo false his tag:?-?|mutation increasing interaction:209-209 - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P02931 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371336|ensemblbacteria:AAC74015|ensemblbacteria:BAA35675 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompf_ecoli(display_long)|uniprotkb:ompF(gene name)|psi-mi:ompF(display_short)|uniprotkb:cmlB(gene name synonym)|uniprotkb:tolF(gene name synonym)|uniprotkb:coa(gene name synonym)|uniprotkb:cry(gene name synonym)|uniprotkb:Porin OmpF(gene name synonym)|uniprotkb:Outer membrane protein 1A(gene name synonym)|uniprotkb:Outer membrane protein IA(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:b0929(locus name)|uniprotkb:JW0912(locus name)|uniprotkb:Outer membrane protein F(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9078820|imex:IM-22035-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000977920.1|refseq:NP_415449.1|rcsb pdb:4D5U|rcsb pdb:4GCP|rcsb pdb:4GCQ|rcsb pdb:4GCS|rcsb pdb:4JFB|rcsb pdb:4LSE|rcsb pdb:4LSF|rcsb pdb:4LSH|rcsb pdb:4LSI|rcsb pdb:5NUO|rcsb pdb:5NUQ|rcsb pdb:3POX|rcsb pdb:5NUR|rcsb pdb:6WTZ|rcsb pdb:6ZHP|rcsb pdb:6ZHV|ensemblbacteria:AAC74015(transcript)|ensemblbacteria:b0929(gene)|ensemblbacteria:BAA35675(gene)|ensemblbacteria:BAA35675(transcript)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0005216"(ion channel activity)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0034702"(ion channel complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042912"(colicin transmembrane transporter activity)|go:"GO:0046930"(pore complex)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|interpro:IPR033900|rcsb pdb:1GFM|rcsb pdb:1GFN|rcsb pdb:1GFO|rcsb pdb:1GFP|rcsb pdb:1GFQ|rcsb pdb:1HXT|rcsb pdb:1HXU|rcsb pdb:1HXX|rcsb pdb:1MPF|rcsb pdb:1OPF|rcsb pdb:2OMF|rcsb pdb:2ZFG|rcsb pdb:2ZLD|rcsb pdb:3FYX|rcsb pdb:3HW9|rcsb pdb:3HWB|rcsb pdb:3K19|rcsb pdb:3K1B|rcsb pdb:3O0E|rcsb pdb:3POQ|rcsb pdb:3POU|rcsb pdb:1BT9|dip:DIP-10398N - - crc64:3F0974D96DB65464 figure legend:sf4a|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:XBV4vmVyGY7JXC71Uk2YGec4H+c83333 intact-crc:FA5620401EE37F77|rigid:8GYPRq4bGuL+hylbN1rIr/xPfsM false his tag:?-? - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P06996 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371155|ensemblbacteria:AAC75275|ensemblbacteria:BAA15998 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompc_ecoli(display_long)|uniprotkb:ompC(gene name)|psi-mi:ompC(display_short)|uniprotkb:meoA(gene name synonym)|uniprotkb:par(gene name synonym)|uniprotkb:b2215(locus name)|uniprotkb:Outer membrane protein 1B(gene name synonym)|uniprotkb:JW2203(locus name)|uniprotkb:Porin OmpC(gene name synonym)|uniprotkb:Outer membrane protein C(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9078820|imex:IM-22035-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_416719.1|refseq:WP_000865568.1|ensemblbacteria:AAC75275(transcript)|ensemblbacteria:b2215(gene)|ensemblbacteria:BAA15998(gene)|ensemblbacteria:BAA15998(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0015914"(phospholipid transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046813"(receptor-mediated virion attachment to host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0046930"(pore complex)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|rcsb pdb:2J1N|rcsb pdb:2J4U|rcsb pdb:2ZLE|rcsb pdb:4A8D|mint:P06996|dip:DIP-10397N - - - figure legend:sf4a|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:fCjcjMFeGIrilHAn6h+yju267lg83333 intact-crc:FA5620401EE37F77|rigid:8GYPRq4bGuL+hylbN1rIr/xPfsM false his tag:?-? - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P0A910 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-9078834|imex:IM-22035-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N - - - figure legend:sf4b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 intact-crc:A86EFDB1D8B7FA7A|rigid:uCvgiW/kFagIq1LRH9ZTcQ+10f4 false his tag:?-?|mutation:209-209 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P06996 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371155|ensemblbacteria:AAC75275|ensemblbacteria:BAA15998 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompc_ecoli(display_long)|uniprotkb:ompC(gene name)|psi-mi:ompC(display_short)|uniprotkb:meoA(gene name synonym)|uniprotkb:par(gene name synonym)|uniprotkb:b2215(locus name)|uniprotkb:Outer membrane protein 1B(gene name synonym)|uniprotkb:JW2203(locus name)|uniprotkb:Porin OmpC(gene name synonym)|uniprotkb:Outer membrane protein C(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_416719.1|refseq:WP_000865568.1|ensemblbacteria:AAC75275(transcript)|ensemblbacteria:b2215(gene)|ensemblbacteria:BAA15998(gene)|ensemblbacteria:BAA15998(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0015914"(phospholipid transport)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046813"(receptor-mediated virion attachment to host cell)|go:"GO:0046872"(metal ion binding)|go:"GO:0046930"(pore complex)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|rcsb pdb:2J1N|rcsb pdb:2J4U|rcsb pdb:2ZLE|rcsb pdb:4A8D|mint:P06996|dip:DIP-10397N - - - figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:fCjcjMFeGIrilHAn6h+yju267lg83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P21420 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-9073123|uniprotkb:P77189 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:nmpc_ecoli(display_long)|uniprotkb:nmpC(gene name)|psi-mi:nmpC(display_short)|uniprotkb:phmA(gene name synonym)|uniprotkb:b0553(locus name) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N interpro:IPR023614|interpro:IPR001897(Porin, bacterial type)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR033900|go:"GO:0009279"(cell outer membrane)|go:"GO:0015288"(porin activity)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0046930"(pore complex) - - - figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:pcDXSA+iu4A3T0cE31JBlis/FDY83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P02931 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371336|ensemblbacteria:AAC74015|ensemblbacteria:BAA35675 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompf_ecoli(display_long)|uniprotkb:ompF(gene name)|psi-mi:ompF(display_short)|uniprotkb:cmlB(gene name synonym)|uniprotkb:tolF(gene name synonym)|uniprotkb:coa(gene name synonym)|uniprotkb:cry(gene name synonym)|uniprotkb:Porin OmpF(gene name synonym)|uniprotkb:Outer membrane protein 1A(gene name synonym)|uniprotkb:Outer membrane protein IA(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:b0929(locus name)|uniprotkb:JW0912(locus name)|uniprotkb:Outer membrane protein F(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000977920.1|refseq:NP_415449.1|rcsb pdb:4D5U|rcsb pdb:4GCP|rcsb pdb:4GCQ|rcsb pdb:4GCS|rcsb pdb:4JFB|rcsb pdb:4LSE|rcsb pdb:4LSF|rcsb pdb:4LSH|rcsb pdb:4LSI|rcsb pdb:5NUO|rcsb pdb:5NUQ|rcsb pdb:3POX|rcsb pdb:5NUR|rcsb pdb:6WTZ|rcsb pdb:6ZHP|rcsb pdb:6ZHV|ensemblbacteria:AAC74015(transcript)|ensemblbacteria:b0929(gene)|ensemblbacteria:BAA35675(gene)|ensemblbacteria:BAA35675(transcript)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0005216"(ion channel activity)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0034702"(ion channel complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042912"(colicin transmembrane transporter activity)|go:"GO:0046930"(pore complex)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|interpro:IPR033900|rcsb pdb:1GFM|rcsb pdb:1GFN|rcsb pdb:1GFO|rcsb pdb:1GFP|rcsb pdb:1GFQ|rcsb pdb:1HXT|rcsb pdb:1HXU|rcsb pdb:1HXX|rcsb pdb:1MPF|rcsb pdb:1OPF|rcsb pdb:2OMF|rcsb pdb:2ZFG|rcsb pdb:2ZLD|rcsb pdb:3FYX|rcsb pdb:3HW9|rcsb pdb:3HWB|rcsb pdb:3K19|rcsb pdb:3K1B|rcsb pdb:3O0E|rcsb pdb:3POQ|rcsb pdb:3POU|rcsb pdb:1BT9|dip:DIP-10398N - - crc64:3F0974D96DB65464 figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:XBV4vmVyGY7JXC71Uk2YGec4H+c83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P0A915 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) - - - figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P0A910 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N - - - figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P0C0V0 uniprotkb:P0A917 intact:EBI-547165|uniprotkb:P09376|uniprotkb:P15724|ensemblbacteria:AAC73272|ensemblbacteria:BAB96738 intact:EBI-552413|uniprotkb:P36546|ensemblbacteria:AAC73901|ensemblbacteria:BAA35486 psi-mi:degp_ecoli(display_long)|uniprotkb:degP(gene name)|psi-mi:degP(display_short)|uniprotkb:htrA(gene name synonym)|uniprotkb:ptd(gene name synonym)|uniprotkb:b0161(locus name)|uniprotkb:JW0157(locus name)|uniprotkb:Heat shock protein DegP(gene name synonym)|uniprotkb:Protease Do(gene name synonym) psi-mi:ompx_ecoli(display_long)|uniprotkb:ompX(gene name)|psi-mi:ompX(display_short)|uniprotkb:b0814(locus name)|uniprotkb:ybiG(gene name synonym)|uniprotkb:JW0799(locus name) psi-mi:"MI:0096"(pull down) Ge et al. (2013) imex:IM-22035|pubmed:24373465 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0471"(MINT) intact:EBI-9076025|imex:IM-22035-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414703.1|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006457"(protein folding)|go:"GO:0006508"(proteolysis)|go:"GO:0006515"(protein quality control for misfolded or incompletely synthesized proteins)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008233"(peptidase activity)|go:"GO:0008236"(serine-type peptidase activity)|go:"GO:0009266"(response to temperature stimulus)|go:"GO:0009408"(response to heat)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR001940(Peptidase S1C, HrtA/DegP2/Q/S)|interpro:IPR009003(Peptidase, trypsin-like serine and cysteine)|refseq:WP_000753946.1|interpro:IPR011782(Peptidase S1C, Do)|interpro:IPR036034|rcsb pdb:1KY9|rcsb pdb:2ZLE|rcsb pdb:3CS0|rcsb pdb:3MH4|rcsb pdb:3MH5|rcsb pdb:3MH6|rcsb pdb:3MH7|rcsb pdb:3OTP|rcsb pdb:3OU0|rcsb pdb:4A8D|rcsb pdb:6JJK|rcsb pdb:6JJL|rcsb pdb:6JJO|ensemblbacteria:AAC73272(transcript)|ensemblbacteria:b0161(gene)|ensemblbacteria:BAB96738(gene)|ensemblbacteria:BAB96738(transcript)|dip:DIP-46256N refseq:NP_415335.1|refseq:WP_001295296.1|dip:DIP-48016N|ensemblbacteria:AAC73901(transcript)|ensemblbacteria:b0814(gene)|ensemblbacteria:BAA35486(gene)|ensemblbacteria:BAA35486(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0044384"(host outer membrane)|interpro:IPR000758(Virulence-related outer membrane protein)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR027385|rcsb pdb:1ORM|rcsb pdb:1Q9F|rcsb pdb:1Q9G|rcsb pdb:1QJ8|rcsb pdb:1QJ9|rcsb pdb:2M06|rcsb pdb:2M07|rcsb pdb:2MNH - - - figure legend:f2a f2b t1|comment:"DegP(S210A)-His has been used in this experiment."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/12/19 2014/10/16 rogid:k/rUQYeabYOrdjpk8ZmRgr38Y5A83333 rogid:iddkfgq0JqBtPnuThwAAn8nfm0A83333 intact-crc:A341A60A9A922AA0|rigid:tWLqHlxfzUaR4TUzkqh2wTXmsoQ false his tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)