#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P47050 uniprotkb:P61830 intact:EBI-25861|uniprotkb:D6VWD7|ensemblfungi:YJL047C intact:EBI-8098|uniprotkb:E9PAG1|uniprotkb:P02303|uniprotkb:P13996|uniprotkb:Q6B1U3|uniprotkb:Q6Q7G9|uniprotkb:D6VQ11|ensemblfungi:YBR010W|ensemblfungi:YNL031C psi-mi:cul8_yeast(display_long)|uniprotkb:RTT101(gene name)|psi-mi:RTT101(display_short)|uniprotkb:CUL8(gene name synonym)|uniprotkb:Cullin-C(gene name synonym)|uniprotkb:Regulator of Ty1 transposition protein 101(gene name synonym)|uniprotkb:J1166(orf name)|uniprotkb:YJL047C(locus name) psi-mi:h3_yeast(display_long)|uniprotkb:SIN2(gene name synonym)|uniprotkb:YNL031C(locus name)|uniprotkb:N2749(orf name)|uniprotkb:HHT1(gene name)|psi-mi:HHT1(display_short)|uniprotkb:YBR010W(locus name)|uniprotkb:YBR0201(orf name)|uniprotkb:HHT2(gene name)|psi-mi:HHT2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870639|imex:IM-21746-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003583|refseq:NP_012488.3|mint:P47050|dip:DIP-2887N|ensemblfungi:YJL047C(gene)|ensemblfungi:YJL047C_mRNA(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007088"(regulation of mitotic nuclear division)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031297"(replication fork processing)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0070651"(nonfunctional rRNA decay)|interpro:IPR016158(Cullin homology)|interpro:IPR019559|interpro:IPR036317|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210 refseq:NP_009564.1|refseq:NP_014367.1|sgd:S000000214|sgd:S000004976|mint:P61830|dip:DIP-417N|ensemblfungi:YBR010W(gene)|ensemblfungi:YBR010W_mRNA(transcript)|ensemblfungi:YNL031C(gene)|ensemblfungi:YNL031C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0009303"(rRNA transcription)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0043505"(CENP-A containing nucleosome)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070911"(global genome nucleotide-excision repair)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:1M1D|rcsb pdb:1PEG|rcsb pdb:1PU9|rcsb pdb:1PUA|rcsb pdb:1QSN|rcsb pdb:2CNX|rcsb pdb:2H2G|rcsb pdb:2IDC|rcsb pdb:2JMJ|rcsb pdb:2RNW|rcsb pdb:2RNX|rcsb pdb:2RSN|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3Q33|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6J2P|rcsb pdb:6KMJ|rcsb pdb:7K7G - crc64:A86A48F6DC6AF163 crc64:A6115FEB480AC67A figure legend:Fig. 1E, 1F, 2C|comment:The amount of Rtt101 coimmunoprecipitated with H3 was dramatically reduced in mms1-/- and to a lesser extent in mms22-/- mutant cells compared to wild-type cells. Interaction not observed in Rtt109 -/- or Asf1 -/- cells.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:Dt2biHwRvkZgQNrr8j8T01QAdXQ559292 rogid:jtDVNjrs2tJMmr/dqrvnNiQ2ppQ559292 intact-crc:9EC14EC8284CBDB1|rigid:C9oRm6CG+zyWrfQYY7tLAGzkCR0 false ha tag:?-? calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P47050 uniprotkb:P02309 intact:EBI-25861|uniprotkb:D6VWD7|ensemblfungi:YJL047C intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W psi-mi:cul8_yeast(display_long)|uniprotkb:RTT101(gene name)|psi-mi:RTT101(display_short)|uniprotkb:CUL8(gene name synonym)|uniprotkb:Cullin-C(gene name synonym)|uniprotkb:Regulator of Ty1 transposition protein 101(gene name synonym)|uniprotkb:J1166(orf name)|uniprotkb:YJL047C(locus name) psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870647|imex:IM-21746-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003583|refseq:NP_012488.3|mint:P47050|dip:DIP-2887N|ensemblfungi:YJL047C(gene)|ensemblfungi:YJL047C_mRNA(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007088"(regulation of mitotic nuclear division)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031297"(replication fork processing)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0070651"(nonfunctional rRNA decay)|interpro:IPR016158(Cullin homology)|interpro:IPR019559|interpro:IPR036317|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210 refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519 - crc64:A86A48F6DC6AF163 crc64:69B7D1F89E62DE41 figure legend:Fig. 1E|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:Dt2biHwRvkZgQNrr8j8T01QAdXQ559292 rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292 intact-crc:AB29EB6861FF763C|rigid:ThfD2Fwv7HO7pvT13gCxM9RlXp0 false ha tag:?-? calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P32447 uniprotkb:P61830 intact:EBI-3003|uniprotkb:D6VW69|ensemblfungi:YJL115W intact:EBI-8098|uniprotkb:E9PAG1|uniprotkb:P02303|uniprotkb:P13996|uniprotkb:Q6B1U3|uniprotkb:Q6Q7G9|uniprotkb:D6VQ11|ensemblfungi:YBR010W|ensemblfungi:YNL031C psi-mi:asf1_yeast(display_long)|uniprotkb:ASF1(gene name)|psi-mi:ASF1(display_short)|uniprotkb:YJL115W(locus name)|uniprotkb:J0755(orf name)|uniprotkb:CIA1(gene name synonym)|uniprotkb:Anti-silencing function protein 1(gene name synonym) psi-mi:h3_yeast(display_long)|uniprotkb:SIN2(gene name synonym)|uniprotkb:YNL031C(locus name)|uniprotkb:N2749(orf name)|uniprotkb:HHT1(gene name)|psi-mi:HHT1(display_short)|uniprotkb:YBR010W(locus name)|uniprotkb:YBR0201(orf name)|uniprotkb:HHT2(gene name)|psi-mi:HHT2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870770|imex:IM-21746-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012420.1|sgd:S000003651|dip:DIP-2675N|mint:P32447|ensemblfungi:YJL115W(gene)|ensemblfungi:YJL115W_mRNA(transcript)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001207"(obsolete histone displacement)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006348"|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010698"(acetyltransferase activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0033523"(histone H2B ubiquitination)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0042393"(histone binding)|go:"GO:0043486"(histone exchange)|go:"GO:0043618"(regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0070775"(H3 histone acetyltransferase complex)|go:"GO:0097043"(histone H3-K56 acetylation)|interpro:IPR006818(Anti-silencing protein, ASF1-like)|interpro:IPR017282(Histone deposition protein Asf1)|interpro:IPR036747|rcsb pdb:1ROC|rcsb pdb:1WG3|rcsb pdb:2HUE|rcsb pdb:2IDC|rcsb pdb:2YGV|rcsb pdb:4EO5|rcsb pdb:4ZBJ|rcsb pdb:5EII|rcsb pdb:5UCB|rcsb pdb:5UEA|rcsb pdb:5UEK|rcsb pdb:6AYZ|rcsb pdb:6AZ2|rcsb pdb:6F0Y|rcsb pdb:6O22|reactome:R-SCE-2559584 refseq:NP_009564.1|refseq:NP_014367.1|sgd:S000000214|sgd:S000004976|mint:P61830|dip:DIP-417N|ensemblfungi:YBR010W(gene)|ensemblfungi:YBR010W_mRNA(transcript)|ensemblfungi:YNL031C(gene)|ensemblfungi:YNL031C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0009303"(rRNA transcription)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0043505"(CENP-A containing nucleosome)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070911"(global genome nucleotide-excision repair)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:1M1D|rcsb pdb:1PEG|rcsb pdb:1PU9|rcsb pdb:1PUA|rcsb pdb:1QSN|rcsb pdb:2CNX|rcsb pdb:2H2G|rcsb pdb:2IDC|rcsb pdb:2JMJ|rcsb pdb:2RNW|rcsb pdb:2RNX|rcsb pdb:2RSN|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3Q33|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6J2P|rcsb pdb:6KMJ|rcsb pdb:7K7G - crc64:186E76075C0B1644 crc64:A6115FEB480AC67A figure legend:Fig. 6A|comment:Cells lacking Rtt101 or expressing H3 with mutated lysine residues exhibit an increased association of Asf1 with H3-H4.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:En27z1xiUMZBu18Nq9rrAsUy5Zs559292 rogid:jtDVNjrs2tJMmr/dqrvnNiQ2ppQ559292 intact-crc:3BA1AC02598B172A|rigid:T6s4vBtUyo6o4epVg58DYVTAbIk false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:57-57 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P32447 uniprotkb:P02309 intact:EBI-3003|uniprotkb:D6VW69|ensemblfungi:YJL115W intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W psi-mi:asf1_yeast(display_long)|uniprotkb:ASF1(gene name)|psi-mi:ASF1(display_short)|uniprotkb:YJL115W(locus name)|uniprotkb:J0755(orf name)|uniprotkb:CIA1(gene name synonym)|uniprotkb:Anti-silencing function protein 1(gene name synonym) psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870770|imex:IM-21746-5 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012420.1|sgd:S000003651|dip:DIP-2675N|mint:P32447|ensemblfungi:YJL115W(gene)|ensemblfungi:YJL115W_mRNA(transcript)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001207"(obsolete histone displacement)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006348"|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010698"(acetyltransferase activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0033523"(histone H2B ubiquitination)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0042393"(histone binding)|go:"GO:0043486"(histone exchange)|go:"GO:0043618"(regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0070775"(H3 histone acetyltransferase complex)|go:"GO:0097043"(histone H3-K56 acetylation)|interpro:IPR006818(Anti-silencing protein, ASF1-like)|interpro:IPR017282(Histone deposition protein Asf1)|interpro:IPR036747|rcsb pdb:1ROC|rcsb pdb:1WG3|rcsb pdb:2HUE|rcsb pdb:2IDC|rcsb pdb:2YGV|rcsb pdb:4EO5|rcsb pdb:4ZBJ|rcsb pdb:5EII|rcsb pdb:5UCB|rcsb pdb:5UEA|rcsb pdb:5UEK|rcsb pdb:6AYZ|rcsb pdb:6AZ2|rcsb pdb:6F0Y|rcsb pdb:6O22|reactome:R-SCE-2559584 refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519 - crc64:186E76075C0B1644 crc64:69B7D1F89E62DE41 figure legend:Fig. 6A|comment:Cells lacking Rtt101 or expressing H3 with mutated lysine residues exhibit an increased association of Asf1 with H3-H4.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:En27z1xiUMZBu18Nq9rrAsUy5Zs559292 rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292 intact-crc:3BA1AC02598B172A|rigid:T6s4vBtUyo6o4epVg58DYVTAbIk false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:6-6,13-13 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P61830 uniprotkb:P02309 intact:EBI-8098|uniprotkb:E9PAG1|uniprotkb:P02303|uniprotkb:P13996|uniprotkb:Q6B1U3|uniprotkb:Q6Q7G9|uniprotkb:D6VQ11|ensemblfungi:YBR010W|ensemblfungi:YNL031C intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W psi-mi:h3_yeast(display_long)|uniprotkb:SIN2(gene name synonym)|uniprotkb:YNL031C(locus name)|uniprotkb:N2749(orf name)|uniprotkb:HHT1(gene name)|psi-mi:HHT1(display_short)|uniprotkb:YBR010W(locus name)|uniprotkb:YBR0201(orf name)|uniprotkb:HHT2(gene name)|psi-mi:HHT2(display_short) psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870754|imex:IM-21746-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009564.1|refseq:NP_014367.1|sgd:S000000214|sgd:S000004976|mint:P61830|dip:DIP-417N|ensemblfungi:YBR010W(gene)|ensemblfungi:YBR010W_mRNA(transcript)|ensemblfungi:YNL031C(gene)|ensemblfungi:YNL031C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0009303"(rRNA transcription)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0043505"(CENP-A containing nucleosome)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070911"(global genome nucleotide-excision repair)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:1M1D|rcsb pdb:1PEG|rcsb pdb:1PU9|rcsb pdb:1PUA|rcsb pdb:1QSN|rcsb pdb:2CNX|rcsb pdb:2H2G|rcsb pdb:2IDC|rcsb pdb:2JMJ|rcsb pdb:2RNW|rcsb pdb:2RNX|rcsb pdb:2RSN|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3Q33|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6J2P|rcsb pdb:6KMJ|rcsb pdb:7K7G refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519 - crc64:A6115FEB480AC67A crc64:69B7D1F89E62DE41 figure legend:Fig. 3C, 3F, Supp Fig. 1B|comment:"The apparent molecular weight of the H3K122ub proteins corresponds to one histone H3 conjugated with two and six ubiquitin molecules (H3-Ub2 and H3-Ub6), respectively."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:jtDVNjrs2tJMmr/dqrvnNiQ2ppQ559292 rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292 intact-crc:D2BF474A30375AD8|rigid:MBBZpF6i3n5Gw+ZjhZ0xSmuMkJI false ubiquitinylated lysine:123-123|N-acetylated L-lysine:57-57 calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q04199 uniprotkb:P61830 intact:EBI-3920|uniprotkb:D6W0I2|ensemblfungi:YML102W intact:EBI-8098|uniprotkb:E9PAG1|uniprotkb:P02303|uniprotkb:P13996|uniprotkb:Q6B1U3|uniprotkb:Q6Q7G9|uniprotkb:D6VQ11|ensemblfungi:YBR010W|ensemblfungi:YNL031C psi-mi:cac2_yeast(display_long)|uniprotkb:CAC2(gene name)|psi-mi:CAC2(display_short)|uniprotkb:CAF-1 60 kDa subunit(gene name synonym)|uniprotkb:YML102W(locus name) psi-mi:h3_yeast(display_long)|uniprotkb:SIN2(gene name synonym)|uniprotkb:YNL031C(locus name)|uniprotkb:N2749(orf name)|uniprotkb:HHT1(gene name)|psi-mi:HHT1(display_short)|uniprotkb:YBR010W(locus name)|uniprotkb:YBR0201(orf name)|uniprotkb:HHT2(gene name)|psi-mi:HHT2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870819|imex:IM-21746-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013605.1|sgd:S000004570|dip:DIP-811N|mint:Q04199|ensemblfungi:YML102W(gene)|ensemblfungi:YML102W_mRNA(transcript)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0033186"(CAF-1 complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR024977|interpro:IPR036322 refseq:NP_009564.1|refseq:NP_014367.1|sgd:S000000214|sgd:S000004976|mint:P61830|dip:DIP-417N|ensemblfungi:YBR010W(gene)|ensemblfungi:YBR010W_mRNA(transcript)|ensemblfungi:YNL031C(gene)|ensemblfungi:YNL031C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0009303"(rRNA transcription)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0043505"(CENP-A containing nucleosome)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070911"(global genome nucleotide-excision repair)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:1M1D|rcsb pdb:1PEG|rcsb pdb:1PU9|rcsb pdb:1PUA|rcsb pdb:1QSN|rcsb pdb:2CNX|rcsb pdb:2H2G|rcsb pdb:2IDC|rcsb pdb:2JMJ|rcsb pdb:2RNW|rcsb pdb:2RNX|rcsb pdb:2RSN|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3Q33|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6J2P|rcsb pdb:6KMJ|rcsb pdb:7K7G - crc64:F24853C4AA4D97C2 crc64:A6115FEB480AC67A figure legend:Supp. Fig. 4D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:wYFhzFGZWPTAFCB+mYm7jZMrIZg559292 rogid:jtDVNjrs2tJMmr/dqrvnNiQ2ppQ559292 intact-crc:98AFAD13D4525688|rigid:Ia1ZRXtYp3AbhOasy+bUhKWeAYw false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:57-57 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q04199 uniprotkb:P02309 intact:EBI-3920|uniprotkb:D6W0I2|ensemblfungi:YML102W intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W psi-mi:cac2_yeast(display_long)|uniprotkb:CAC2(gene name)|psi-mi:CAC2(display_short)|uniprotkb:CAF-1 60 kDa subunit(gene name synonym)|uniprotkb:YML102W(locus name) psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870819|imex:IM-21746-9 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013605.1|sgd:S000004570|dip:DIP-811N|mint:Q04199|ensemblfungi:YML102W(gene)|ensemblfungi:YML102W_mRNA(transcript)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0033186"(CAF-1 complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR024977|interpro:IPR036322 refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519 - crc64:F24853C4AA4D97C2 crc64:69B7D1F89E62DE41 figure legend:Supp. Fig. 4D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:wYFhzFGZWPTAFCB+mYm7jZMrIZg559292 rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292 intact-crc:98AFAD13D4525688|rigid:Ia1ZRXtYp3AbhOasy+bUhKWeAYw false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:6-6,13-13 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P40161 uniprotkb:P61830 intact:EBI-29119|uniprotkb:D6W0Y4|ensemblfungi:YNL206C intact:EBI-8098|uniprotkb:E9PAG1|uniprotkb:P02303|uniprotkb:P13996|uniprotkb:Q6B1U3|uniprotkb:Q6Q7G9|uniprotkb:D6VQ11|ensemblfungi:YBR010W|ensemblfungi:YNL031C psi-mi:rt106_yeast(display_long)|uniprotkb:Regulator of Ty1 transposition protein 106(gene name synonym)|uniprotkb:YNL206C(locus name)|uniprotkb:N1346(orf name)|uniprotkb:RTT106(gene name)|psi-mi:RTT106(display_short) psi-mi:h3_yeast(display_long)|uniprotkb:SIN2(gene name synonym)|uniprotkb:YNL031C(locus name)|uniprotkb:N2749(orf name)|uniprotkb:HHT1(gene name)|psi-mi:HHT1(display_short)|uniprotkb:YBR010W(locus name)|uniprotkb:YBR0201(orf name)|uniprotkb:HHT2(gene name)|psi-mi:HHT2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870795|imex:IM-21746-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014193.1|sgd:S000005150|dip:DIP-4292N|mint:P40161|ensemblfungi:YNL206C(gene)|ensemblfungi:YNL206C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0031491"(nucleosome binding)|go:"GO:0031507"(heterochromatin assembly)|go:"GO:0032196"(transposition)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013719(Region of unknown function DUF1747, eukaryote)|interpro:IPR040770|interpro:IPR040993|rcsb pdb:2LH0|rcsb pdb:3FSS|rcsb pdb:3GYO|rcsb pdb:3GYP|rcsb pdb:3TO1|rcsb pdb:3TVV|rcsb pdb:3TW1 refseq:NP_009564.1|refseq:NP_014367.1|sgd:S000000214|sgd:S000004976|mint:P61830|dip:DIP-417N|ensemblfungi:YBR010W(gene)|ensemblfungi:YBR010W_mRNA(transcript)|ensemblfungi:YNL031C(gene)|ensemblfungi:YNL031C_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0009303"(rRNA transcription)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0043505"(CENP-A containing nucleosome)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070911"(global genome nucleotide-excision repair)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|rcsb pdb:1ID3|rcsb pdb:1M1D|rcsb pdb:1PEG|rcsb pdb:1PU9|rcsb pdb:1PUA|rcsb pdb:1QSN|rcsb pdb:2CNX|rcsb pdb:2H2G|rcsb pdb:2IDC|rcsb pdb:2JMJ|rcsb pdb:2RNW|rcsb pdb:2RNX|rcsb pdb:2RSN|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3Q33|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6J2P|rcsb pdb:6KMJ|rcsb pdb:7K7G - crc64:79CACA659A7F4F4D crc64:A6115FEB480AC67A figure legend:Fig. 6C|comment:Cells lacking Rtt101 or expressing H3 with mutated lysine residues exhibit an increased association of Asf1 with H3-H4.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:A2isuuBEAm1qbw9kuBVV2var23M559292 rogid:jtDVNjrs2tJMmr/dqrvnNiQ2ppQ559292 intact-crc:B8F2E8E99551F8A0|rigid:IpVaDKcN812jLtvn3IgCxjanR8s false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:57-57 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P40161 uniprotkb:P02309 intact:EBI-29119|uniprotkb:D6W0Y4|ensemblfungi:YNL206C intact:EBI-8113|uniprotkb:D6VQ10|ensemblfungi:YBR009C|ensemblfungi:YNL030W psi-mi:rt106_yeast(display_long)|uniprotkb:Regulator of Ty1 transposition protein 106(gene name synonym)|uniprotkb:YNL206C(locus name)|uniprotkb:N1346(orf name)|uniprotkb:RTT106(gene name)|psi-mi:RTT106(display_short) psi-mi:h4_yeast(display_long)|uniprotkb:N2752(orf name)|uniprotkb:YBR0122(orf name)|uniprotkb:YBR009C(locus name)|uniprotkb:YNL030W(locus name)|uniprotkb:HHF1(gene name)|psi-mi:HHF1(display_short)|uniprotkb:HHF2(gene name)|psi-mi:HHF2(display_short) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870795|imex:IM-21746-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014193.1|sgd:S000005150|dip:DIP-4292N|mint:P40161|ensemblfungi:YNL206C(gene)|ensemblfungi:YNL206C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0031491"(nucleosome binding)|go:"GO:0031507"(heterochromatin assembly)|go:"GO:0032196"(transposition)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013719(Region of unknown function DUF1747, eukaryote)|interpro:IPR040770|interpro:IPR040993|rcsb pdb:2LH0|rcsb pdb:3FSS|rcsb pdb:3GYO|rcsb pdb:3GYP|rcsb pdb:3TO1|rcsb pdb:3TVV|rcsb pdb:3TW1 refseq:NP_009563.1|refseq:NP_014368.1|sgd:S000000213|sgd:S000004975|dip:DIP-418N|mint:P02309|ensemblfungi:YBR009C(gene)|ensemblfungi:YBR009C_mRNA(transcript)|ensemblfungi:YNL030W(gene)|ensemblfungi:YNL030W_mRNA(transcript)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|go:"GO:0006333"(chromatin assembly or disassembly)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0043935"(sexual sporulation resulting in formation of a cellular spore)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|interpro:IPR001951(Histone H4)|interpro:IPR009072(Histone-fold)|interpro:IPR019809|interpro:IPR035425|rcsb pdb:1E6I|rcsb pdb:1ID3|rcsb pdb:1Q1A|rcsb pdb:1SZC|rcsb pdb:1SZD|rcsb pdb:2DVQ|rcsb pdb:2DVR|rcsb pdb:2E3K|rcsb pdb:2FSB|rcsb pdb:2H2H|rcsb pdb:2L5A|rcsb pdb:2QQF|rcsb pdb:2QQG|rcsb pdb:3TO6|rcsb pdb:4JJN|rcsb pdb:4KUD|rcsb pdb:4PSX|rcsb pdb:4TWI|rcsb pdb:4TWJ|rcsb pdb:5W0V|rcsb pdb:5ZBA|rcsb pdb:5ZBB|rcsb pdb:6GEJ|rcsb pdb:6GEN|rcsb pdb:6QLD|rcsb pdb:6RXJ|rcsb pdb:6RXK|rcsb pdb:6RXL|rcsb pdb:6RXM|rcsb pdb:6RXO|rcsb pdb:6RXP|rcsb pdb:6RXQ|rcsb pdb:6RXR|rcsb pdb:7K78|rcsb pdb:7K7G|reactome:R-SCE-2299718|reactome:R-SCE-2559580|reactome:R-SCE-3214842|reactome:R-SCE-3214847|reactome:R-SCE-3214858|reactome:R-SCE-4551638|reactome:R-SCE-9018519 - crc64:79CACA659A7F4F4D crc64:69B7D1F89E62DE41 figure legend:Fig. 6C|comment:Cells lacking Rtt101 or expressing H3 with mutated lysine residues exhibit an increased association of Asf1 with H3-H4.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/11/21 2014/10/16 rogid:A2isuuBEAm1qbw9kuBVV2var23M559292 rogid:wGtUrumyxGKsW9BEzkBW3FwvwUo559292 intact-crc:B8F2E8E99551F8A0|rigid:IpVaDKcN812jLtvn3IgCxjanR8s false calmodulin binding peptide plus protein a tag:?-? N-acetylated L-lysine:6-6,13-13 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P02299 uniprotkb:P40161 intact:EBI-522090|uniprotkb:Q4ABE4|ensemblmetazoa:FBpp0085250|ensemblmetazoa:FBpp0091051|ensemblmetazoa:FBpp0091053|ensemblmetazoa:FBpp0091056|ensemblmetazoa:FBpp0091058|ensemblmetazoa:FBpp0091061|ensemblmetazoa:FBpp0091064|ensemblmetazoa:FBpp0091067|ensemblmetazoa:FBpp0091070|ensemblmetazoa:FBpp0091073|ensemblmetazoa:FBpp0091076|ensemblmetazoa:FBpp0091079|ensemblmetazoa:FBpp0091082|ensemblmetazoa:FBpp0091085|ensemblmetazoa:FBpp0091088|ensemblmetazoa:FBpp0091091|ensemblmetazoa:FBpp0091094|ensemblmetazoa:FBpp0091097|ensemblmetazoa:FBpp0091100|ensemblmetazoa:FBpp0091103|ensemblmetazoa:FBpp0091106|ensemblmetazoa:FBpp0091109|ensemblmetazoa:FBpp0091112 intact:EBI-29119|uniprotkb:D6W0Y4|ensemblfungi:YNL206C psi-mi:h3_drome(display_long)|uniprotkb:His3(gene name)|psi-mi:His3(display_short)|uniprotkb:"His3:CG31613"(gene name)|psi-mi:"His3:CG31613"(display_short)|uniprotkb:"His3:CG33857"(gene name)|psi-mi:"His3:CG33857"(display_short)|uniprotkb:"His3:CG33860"(gene name)|psi-mi:"His3:CG33860"(display_short)|uniprotkb:"His3:CG33863"(gene name)|psi-mi:"His3:CG33863"(display_short)|uniprotkb:"His3:CG33866"(gene name)|psi-mi:"His3:CG33866"(display_short)|uniprotkb:CG31613(orf name)|uniprotkb:CG33803(orf name)|uniprotkb:CG33806(orf name)|uniprotkb:CG33809(orf name)|uniprotkb:CG33812(orf name)|uniprotkb:CG33815(orf name)|uniprotkb:CG33818(orf name)|uniprotkb:CG33821(orf name)|uniprotkb:CG33824(orf name)|uniprotkb:CG33827(orf name)|uniprotkb:CG33830(orf name)|uniprotkb:CG33833(orf name)|uniprotkb:CG33836(orf name)|uniprotkb:CG33839(orf name)|uniprotkb:CG33842(orf name)|uniprotkb:CG33845(orf name)|uniprotkb:CG33848(orf name)|uniprotkb:CG33851(orf name)|uniprotkb:CG33854(orf name)|uniprotkb:CG33857(orf name)|uniprotkb:CG33860(orf name)|uniprotkb:CG33863(orf name)|uniprotkb:CG33866(orf name)|uniprotkb:"His3:CG33803"(gene name)|psi-mi:"His3:CG33803"(display_short)|uniprotkb:"His3:CG33806"(gene name)|psi-mi:"His3:CG33806"(display_short)|uniprotkb:"His3:CG33809"(gene name)|psi-mi:"His3:CG33809"(display_short)|uniprotkb:"His3:CG33812"(gene name)|psi-mi:"His3:CG33812"(display_short)|uniprotkb:"His3:CG33815"(gene name)|psi-mi:"His3:CG33815"(display_short)|uniprotkb:"His3:CG33818"(gene name)|psi-mi:"His3:CG33818"(display_short)|uniprotkb:"His3:CG33821"(gene name)|psi-mi:"His3:CG33821"(display_short)|uniprotkb:"His3:CG33824"(gene name)|psi-mi:"His3:CG33824"(display_short)|uniprotkb:"His3:CG33827"(gene name)|psi-mi:"His3:CG33827"(display_short)|uniprotkb:"His3:CG33830"(gene name)|psi-mi:"His3:CG33830"(display_short)|uniprotkb:"His3:CG33833"(gene name)|psi-mi:"His3:CG33833"(display_short)|uniprotkb:"His3:CG33836"(gene name)|psi-mi:"His3:CG33836"(display_short)|uniprotkb:"His3:CG33839"(gene name)|psi-mi:"His3:CG33839"(display_short)|uniprotkb:"His3:CG33842"(gene name)|psi-mi:"His3:CG33842"(display_short)|uniprotkb:"His3:CG33845"(gene name)|psi-mi:"His3:CG33845"(display_short)|uniprotkb:"His3:CG33848"(gene name)|psi-mi:"His3:CG33848"(display_short)|uniprotkb:"His3:CG33851"(gene name)|psi-mi:"His3:CG33851"(display_short)|uniprotkb:"His3:CG33854"(gene name)|psi-mi:"His3:CG33854"(display_short) psi-mi:rt106_yeast(display_long)|uniprotkb:Regulator of Ty1 transposition protein 106(gene name synonym)|uniprotkb:YNL206C(locus name)|uniprotkb:N1346(orf name)|uniprotkb:RTT106(gene name)|psi-mi:RTT106(display_short) psi-mi:"MI:0096"(pull down) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870808|imex:IM-21746-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001027285.1|refseq:NP_001027289.1|refseq:NP_001027294.1|refseq:NP_001027298.1|refseq:NP_001027303.1|refseq:NP_001027308.1|refseq:NP_001027313.1|refseq:NP_001027318.1|refseq:NP_001027323.1|refseq:NP_001027328.1|refseq:NP_001027333.1|refseq:NP_001027338.1|refseq:NP_001027343.1|refseq:NP_001027348.1|refseq:NP_001027353.1|refseq:NP_001027358.1|refseq:NP_001027363.1|refseq:NP_001027368.1|refseq:NP_001027373.1|refseq:NP_001027378.1|refseq:NP_001027383.1|refseq:NP_001027387.1|refseq:NP_724345.1|flybase:FBgn0001199|flybase:FBgn0051613|flybase:FBgn0053803|flybase:FBgn0053806|flybase:FBgn0053809|flybase:FBgn0053812|flybase:FBgn0053815|flybase:FBgn0053818|flybase:FBgn0053821|flybase:FBgn0053824|flybase:FBgn0053827|flybase:FBgn0053830|flybase:FBgn0053833|flybase:FBgn0053836|flybase:FBgn0053839|flybase:FBgn0053842|flybase:FBgn0053845|flybase:FBgn0053848|flybase:FBgn0053851|flybase:FBgn0053854|flybase:FBgn0053857|flybase:FBgn0053860|flybase:FBgn0053863|flybase:FBgn0053866|dip:DIP-38722N|ensemblmetazoa:FBgn0051613(gene)|ensemblmetazoa:FBgn0053803(gene)|ensemblmetazoa:FBgn0053806(gene)|ensemblmetazoa:FBgn0053809(gene)|ensemblmetazoa:FBgn0053812(gene)|ensemblmetazoa:FBgn0053815(gene)|ensemblmetazoa:FBgn0053818(gene)|ensemblmetazoa:FBgn0053821(gene)|ensemblmetazoa:FBgn0053824(gene)|ensemblmetazoa:FBgn0053827(gene)|ensemblmetazoa:FBgn0053830(gene)|ensemblmetazoa:FBgn0053833(gene)|ensemblmetazoa:FBgn0053836(gene)|ensemblmetazoa:FBgn0053839(gene)|ensemblmetazoa:FBgn0053842(gene)|ensemblmetazoa:FBgn0053845(gene)|ensemblmetazoa:FBgn0053848(gene)|ensemblmetazoa:FBgn0053851(gene)|ensemblmetazoa:FBgn0053854(gene)|ensemblmetazoa:FBgn0053857(gene)|ensemblmetazoa:FBgn0053860(gene)|ensemblmetazoa:FBgn0053863(gene)|ensemblmetazoa:FBgn0053866(gene)|ensemblmetazoa:FBtr0085894(transcript)|ensemblmetazoa:FBtr0091807(transcript)|ensemblmetazoa:FBtr0091810(transcript)|ensemblmetazoa:FBtr0091813(transcript)|ensemblmetazoa:FBtr0091816(transcript)|ensemblmetazoa:FBtr0091819(transcript)|ensemblmetazoa:FBtr0091822(transcript)|ensemblmetazoa:FBtr0091825(transcript)|ensemblmetazoa:FBtr0091828(transcript)|ensemblmetazoa:FBtr0091831(transcript)|ensemblmetazoa:FBtr0091834(transcript)|ensemblmetazoa:FBtr0091837(transcript)|ensemblmetazoa:FBtr0091840(transcript)|ensemblmetazoa:FBtr0091843(transcript)|ensemblmetazoa:FBtr0091846(transcript)|ensemblmetazoa:FBtr0091849(transcript)|ensemblmetazoa:FBtr0091852(transcript)|ensemblmetazoa:FBtr0091855(transcript)|ensemblmetazoa:FBtr0091858(transcript)|ensemblmetazoa:FBtr0091861(transcript)|ensemblmetazoa:FBtr0091864(transcript)|ensemblmetazoa:FBtr0091867(transcript)|ensemblmetazoa:FBtr0091870(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000786"(nucleosome)|go:"GO:0005634"(nucleus)|go:"GO:0005700"(polytene chromosome)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0035059"(RCAF complex)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P02299|rcsb pdb:1KNA|rcsb pdb:1KNE|rcsb pdb:2NQB|rcsb pdb:2PYO|rcsb pdb:2YBA|rcsb pdb:4QLC|rcsb pdb:4UUZ|rcsb pdb:4X23|rcsb pdb:5WCU|rcsb pdb:6ASZ|rcsb pdb:6AT0|rcsb pdb:6DZT|rcsb pdb:6MHA|rcsb pdb:6PWE|rcsb pdb:6PWF|reactome:R-DME-1266695|reactome:R-DME-3214847|reactome:R-DME-3247509|reactome:R-DME-8936459|reactome:R-DME-983231 refseq:NP_014193.1|sgd:S000005150|dip:DIP-4292N|mint:P40161|ensemblfungi:YNL206C(gene)|ensemblfungi:YNL206C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005694"(chromosome)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0031491"(nucleosome binding)|go:"GO:0031507"(heterochromatin assembly)|go:"GO:0032196"(transposition)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR013719(Region of unknown function DUF1747, eukaryote)|interpro:IPR040770|interpro:IPR040993|rcsb pdb:2LH0|rcsb pdb:3FSS|rcsb pdb:3GYO|rcsb pdb:3GYP|rcsb pdb:3TO1|rcsb pdb:3TVV|rcsb pdb:3TW1 - - crc64:79CACA659A7F4F4D figure legend:Fig. 6D|comment:Asf1-H3K56ac-H4 proteins were immobilized, ubiquitylated then incubated with GST-Rtt106. More H3 from the immobilized Asf1-H3-H4 complex were transferred to Rtt106 when H3 was ubiquitylated|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/11/21 2014/10/16 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o7227 rogid:A2isuuBEAm1qbw9kuBVV2var23M559292 intact-crc:7DAB3A767FA6CAA3|rigid:gf+PGTH2GcaavDt4sGRT1tjPuOo false ubiquitinylated lysine:?-? glutathione s tranferase tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P32447 uniprotkb:P02299 intact:EBI-3003|uniprotkb:D6VW69|ensemblfungi:YJL115W intact:EBI-522090|uniprotkb:Q4ABE4|ensemblmetazoa:FBpp0085250|ensemblmetazoa:FBpp0091051|ensemblmetazoa:FBpp0091053|ensemblmetazoa:FBpp0091056|ensemblmetazoa:FBpp0091058|ensemblmetazoa:FBpp0091061|ensemblmetazoa:FBpp0091064|ensemblmetazoa:FBpp0091067|ensemblmetazoa:FBpp0091070|ensemblmetazoa:FBpp0091073|ensemblmetazoa:FBpp0091076|ensemblmetazoa:FBpp0091079|ensemblmetazoa:FBpp0091082|ensemblmetazoa:FBpp0091085|ensemblmetazoa:FBpp0091088|ensemblmetazoa:FBpp0091091|ensemblmetazoa:FBpp0091094|ensemblmetazoa:FBpp0091097|ensemblmetazoa:FBpp0091100|ensemblmetazoa:FBpp0091103|ensemblmetazoa:FBpp0091106|ensemblmetazoa:FBpp0091109|ensemblmetazoa:FBpp0091112 psi-mi:asf1_yeast(display_long)|uniprotkb:ASF1(gene name)|psi-mi:ASF1(display_short)|uniprotkb:YJL115W(locus name)|uniprotkb:J0755(orf name)|uniprotkb:CIA1(gene name synonym)|uniprotkb:Anti-silencing function protein 1(gene name synonym) psi-mi:h3_drome(display_long)|uniprotkb:His3(gene name)|psi-mi:His3(display_short)|uniprotkb:"His3:CG31613"(gene name)|psi-mi:"His3:CG31613"(display_short)|uniprotkb:"His3:CG33857"(gene name)|psi-mi:"His3:CG33857"(display_short)|uniprotkb:"His3:CG33860"(gene name)|psi-mi:"His3:CG33860"(display_short)|uniprotkb:"His3:CG33863"(gene name)|psi-mi:"His3:CG33863"(display_short)|uniprotkb:"His3:CG33866"(gene name)|psi-mi:"His3:CG33866"(display_short)|uniprotkb:CG31613(orf name)|uniprotkb:CG33803(orf name)|uniprotkb:CG33806(orf name)|uniprotkb:CG33809(orf name)|uniprotkb:CG33812(orf name)|uniprotkb:CG33815(orf name)|uniprotkb:CG33818(orf name)|uniprotkb:CG33821(orf name)|uniprotkb:CG33824(orf name)|uniprotkb:CG33827(orf name)|uniprotkb:CG33830(orf name)|uniprotkb:CG33833(orf name)|uniprotkb:CG33836(orf name)|uniprotkb:CG33839(orf name)|uniprotkb:CG33842(orf name)|uniprotkb:CG33845(orf name)|uniprotkb:CG33848(orf name)|uniprotkb:CG33851(orf name)|uniprotkb:CG33854(orf name)|uniprotkb:CG33857(orf name)|uniprotkb:CG33860(orf name)|uniprotkb:CG33863(orf name)|uniprotkb:CG33866(orf name)|uniprotkb:"His3:CG33803"(gene name)|psi-mi:"His3:CG33803"(display_short)|uniprotkb:"His3:CG33806"(gene name)|psi-mi:"His3:CG33806"(display_short)|uniprotkb:"His3:CG33809"(gene name)|psi-mi:"His3:CG33809"(display_short)|uniprotkb:"His3:CG33812"(gene name)|psi-mi:"His3:CG33812"(display_short)|uniprotkb:"His3:CG33815"(gene name)|psi-mi:"His3:CG33815"(display_short)|uniprotkb:"His3:CG33818"(gene name)|psi-mi:"His3:CG33818"(display_short)|uniprotkb:"His3:CG33821"(gene name)|psi-mi:"His3:CG33821"(display_short)|uniprotkb:"His3:CG33824"(gene name)|psi-mi:"His3:CG33824"(display_short)|uniprotkb:"His3:CG33827"(gene name)|psi-mi:"His3:CG33827"(display_short)|uniprotkb:"His3:CG33830"(gene name)|psi-mi:"His3:CG33830"(display_short)|uniprotkb:"His3:CG33833"(gene name)|psi-mi:"His3:CG33833"(display_short)|uniprotkb:"His3:CG33836"(gene name)|psi-mi:"His3:CG33836"(display_short)|uniprotkb:"His3:CG33839"(gene name)|psi-mi:"His3:CG33839"(display_short)|uniprotkb:"His3:CG33842"(gene name)|psi-mi:"His3:CG33842"(display_short)|uniprotkb:"His3:CG33845"(gene name)|psi-mi:"His3:CG33845"(display_short)|uniprotkb:"His3:CG33848"(gene name)|psi-mi:"His3:CG33848"(display_short)|uniprotkb:"His3:CG33851"(gene name)|psi-mi:"His3:CG33851"(display_short)|uniprotkb:"His3:CG33854"(gene name)|psi-mi:"His3:CG33854"(display_short) psi-mi:"MI:0096"(pull down) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870782|imex:IM-21746-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012420.1|sgd:S000003651|dip:DIP-2675N|mint:P32447|ensemblfungi:YJL115W(gene)|ensemblfungi:YJL115W_mRNA(transcript)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001207"(obsolete histone displacement)|go:"GO:0001932"(regulation of protein phosphorylation)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006348"|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010698"(acetyltransferase activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0033523"(histone H2B ubiquitination)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0042393"(histone binding)|go:"GO:0043486"(histone exchange)|go:"GO:0043618"(regulation of transcription from RNA polymerase II promoter in response to stress)|go:"GO:0070775"(H3 histone acetyltransferase complex)|go:"GO:0097043"(histone H3-K56 acetylation)|interpro:IPR006818(Anti-silencing protein, ASF1-like)|interpro:IPR017282(Histone deposition protein Asf1)|interpro:IPR036747|rcsb pdb:1ROC|rcsb pdb:1WG3|rcsb pdb:2HUE|rcsb pdb:2IDC|rcsb pdb:2YGV|rcsb pdb:4EO5|rcsb pdb:4ZBJ|rcsb pdb:5EII|rcsb pdb:5UCB|rcsb pdb:5UEA|rcsb pdb:5UEK|rcsb pdb:6AYZ|rcsb pdb:6AZ2|rcsb pdb:6F0Y|rcsb pdb:6O22|reactome:R-SCE-2559584 refseq:NP_001027285.1|refseq:NP_001027289.1|refseq:NP_001027294.1|refseq:NP_001027298.1|refseq:NP_001027303.1|refseq:NP_001027308.1|refseq:NP_001027313.1|refseq:NP_001027318.1|refseq:NP_001027323.1|refseq:NP_001027328.1|refseq:NP_001027333.1|refseq:NP_001027338.1|refseq:NP_001027343.1|refseq:NP_001027348.1|refseq:NP_001027353.1|refseq:NP_001027358.1|refseq:NP_001027363.1|refseq:NP_001027368.1|refseq:NP_001027373.1|refseq:NP_001027378.1|refseq:NP_001027383.1|refseq:NP_001027387.1|refseq:NP_724345.1|flybase:FBgn0001199|flybase:FBgn0051613|flybase:FBgn0053803|flybase:FBgn0053806|flybase:FBgn0053809|flybase:FBgn0053812|flybase:FBgn0053815|flybase:FBgn0053818|flybase:FBgn0053821|flybase:FBgn0053824|flybase:FBgn0053827|flybase:FBgn0053830|flybase:FBgn0053833|flybase:FBgn0053836|flybase:FBgn0053839|flybase:FBgn0053842|flybase:FBgn0053845|flybase:FBgn0053848|flybase:FBgn0053851|flybase:FBgn0053854|flybase:FBgn0053857|flybase:FBgn0053860|flybase:FBgn0053863|flybase:FBgn0053866|dip:DIP-38722N|ensemblmetazoa:FBgn0051613(gene)|ensemblmetazoa:FBgn0053803(gene)|ensemblmetazoa:FBgn0053806(gene)|ensemblmetazoa:FBgn0053809(gene)|ensemblmetazoa:FBgn0053812(gene)|ensemblmetazoa:FBgn0053815(gene)|ensemblmetazoa:FBgn0053818(gene)|ensemblmetazoa:FBgn0053821(gene)|ensemblmetazoa:FBgn0053824(gene)|ensemblmetazoa:FBgn0053827(gene)|ensemblmetazoa:FBgn0053830(gene)|ensemblmetazoa:FBgn0053833(gene)|ensemblmetazoa:FBgn0053836(gene)|ensemblmetazoa:FBgn0053839(gene)|ensemblmetazoa:FBgn0053842(gene)|ensemblmetazoa:FBgn0053845(gene)|ensemblmetazoa:FBgn0053848(gene)|ensemblmetazoa:FBgn0053851(gene)|ensemblmetazoa:FBgn0053854(gene)|ensemblmetazoa:FBgn0053857(gene)|ensemblmetazoa:FBgn0053860(gene)|ensemblmetazoa:FBgn0053863(gene)|ensemblmetazoa:FBgn0053866(gene)|ensemblmetazoa:FBtr0085894(transcript)|ensemblmetazoa:FBtr0091807(transcript)|ensemblmetazoa:FBtr0091810(transcript)|ensemblmetazoa:FBtr0091813(transcript)|ensemblmetazoa:FBtr0091816(transcript)|ensemblmetazoa:FBtr0091819(transcript)|ensemblmetazoa:FBtr0091822(transcript)|ensemblmetazoa:FBtr0091825(transcript)|ensemblmetazoa:FBtr0091828(transcript)|ensemblmetazoa:FBtr0091831(transcript)|ensemblmetazoa:FBtr0091834(transcript)|ensemblmetazoa:FBtr0091837(transcript)|ensemblmetazoa:FBtr0091840(transcript)|ensemblmetazoa:FBtr0091843(transcript)|ensemblmetazoa:FBtr0091846(transcript)|ensemblmetazoa:FBtr0091849(transcript)|ensemblmetazoa:FBtr0091852(transcript)|ensemblmetazoa:FBtr0091855(transcript)|ensemblmetazoa:FBtr0091858(transcript)|ensemblmetazoa:FBtr0091861(transcript)|ensemblmetazoa:FBtr0091864(transcript)|ensemblmetazoa:FBtr0091867(transcript)|ensemblmetazoa:FBtr0091870(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000786"(nucleosome)|go:"GO:0005634"(nucleus)|go:"GO:0005700"(polytene chromosome)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0035059"(RCAF complex)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P02299|rcsb pdb:1KNA|rcsb pdb:1KNE|rcsb pdb:2NQB|rcsb pdb:2PYO|rcsb pdb:2YBA|rcsb pdb:4QLC|rcsb pdb:4UUZ|rcsb pdb:4X23|rcsb pdb:5WCU|rcsb pdb:6ASZ|rcsb pdb:6AT0|rcsb pdb:6DZT|rcsb pdb:6MHA|rcsb pdb:6PWE|rcsb pdb:6PWF|reactome:R-DME-1266695|reactome:R-DME-3214847|reactome:R-DME-3247509|reactome:R-DME-8936459|reactome:R-DME-983231 - crc64:186E76075C0B1644 - figure legend:Fig. 6B|comment:Asf1 bound less H3-H4 molecules when ubiquitylated by the Rtt101Mms1 E3 ligase than unmodified H3-H4 in vitro|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/11/21 2014/10/16 rogid:En27z1xiUMZBu18Nq9rrAsUy5Zs559292 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o7227 intact-crc:237CF2BD19B4AC36|rigid:apoLCOw+hj9jxjhflbvhKBj14NU false his tag:?-? N-acetylated L-lysine:57-57 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P47050 uniprotkb:P02299 intact:EBI-25861|uniprotkb:D6VWD7|ensemblfungi:YJL047C intact:EBI-522090|uniprotkb:Q4ABE4|ensemblmetazoa:FBpp0085250|ensemblmetazoa:FBpp0091051|ensemblmetazoa:FBpp0091053|ensemblmetazoa:FBpp0091056|ensemblmetazoa:FBpp0091058|ensemblmetazoa:FBpp0091061|ensemblmetazoa:FBpp0091064|ensemblmetazoa:FBpp0091067|ensemblmetazoa:FBpp0091070|ensemblmetazoa:FBpp0091073|ensemblmetazoa:FBpp0091076|ensemblmetazoa:FBpp0091079|ensemblmetazoa:FBpp0091082|ensemblmetazoa:FBpp0091085|ensemblmetazoa:FBpp0091088|ensemblmetazoa:FBpp0091091|ensemblmetazoa:FBpp0091094|ensemblmetazoa:FBpp0091097|ensemblmetazoa:FBpp0091100|ensemblmetazoa:FBpp0091103|ensemblmetazoa:FBpp0091106|ensemblmetazoa:FBpp0091109|ensemblmetazoa:FBpp0091112 psi-mi:cul8_yeast(display_long)|uniprotkb:RTT101(gene name)|psi-mi:RTT101(display_short)|uniprotkb:CUL8(gene name synonym)|uniprotkb:Cullin-C(gene name synonym)|uniprotkb:Regulator of Ty1 transposition protein 101(gene name synonym)|uniprotkb:J1166(orf name)|uniprotkb:YJL047C(locus name) psi-mi:h3_drome(display_long)|uniprotkb:His3(gene name)|psi-mi:His3(display_short)|uniprotkb:"His3:CG31613"(gene name)|psi-mi:"His3:CG31613"(display_short)|uniprotkb:"His3:CG33857"(gene name)|psi-mi:"His3:CG33857"(display_short)|uniprotkb:"His3:CG33860"(gene name)|psi-mi:"His3:CG33860"(display_short)|uniprotkb:"His3:CG33863"(gene name)|psi-mi:"His3:CG33863"(display_short)|uniprotkb:"His3:CG33866"(gene name)|psi-mi:"His3:CG33866"(display_short)|uniprotkb:CG31613(orf name)|uniprotkb:CG33803(orf name)|uniprotkb:CG33806(orf name)|uniprotkb:CG33809(orf name)|uniprotkb:CG33812(orf name)|uniprotkb:CG33815(orf name)|uniprotkb:CG33818(orf name)|uniprotkb:CG33821(orf name)|uniprotkb:CG33824(orf name)|uniprotkb:CG33827(orf name)|uniprotkb:CG33830(orf name)|uniprotkb:CG33833(orf name)|uniprotkb:CG33836(orf name)|uniprotkb:CG33839(orf name)|uniprotkb:CG33842(orf name)|uniprotkb:CG33845(orf name)|uniprotkb:CG33848(orf name)|uniprotkb:CG33851(orf name)|uniprotkb:CG33854(orf name)|uniprotkb:CG33857(orf name)|uniprotkb:CG33860(orf name)|uniprotkb:CG33863(orf name)|uniprotkb:CG33866(orf name)|uniprotkb:"His3:CG33803"(gene name)|psi-mi:"His3:CG33803"(display_short)|uniprotkb:"His3:CG33806"(gene name)|psi-mi:"His3:CG33806"(display_short)|uniprotkb:"His3:CG33809"(gene name)|psi-mi:"His3:CG33809"(display_short)|uniprotkb:"His3:CG33812"(gene name)|psi-mi:"His3:CG33812"(display_short)|uniprotkb:"His3:CG33815"(gene name)|psi-mi:"His3:CG33815"(display_short)|uniprotkb:"His3:CG33818"(gene name)|psi-mi:"His3:CG33818"(display_short)|uniprotkb:"His3:CG33821"(gene name)|psi-mi:"His3:CG33821"(display_short)|uniprotkb:"His3:CG33824"(gene name)|psi-mi:"His3:CG33824"(display_short)|uniprotkb:"His3:CG33827"(gene name)|psi-mi:"His3:CG33827"(display_short)|uniprotkb:"His3:CG33830"(gene name)|psi-mi:"His3:CG33830"(display_short)|uniprotkb:"His3:CG33833"(gene name)|psi-mi:"His3:CG33833"(display_short)|uniprotkb:"His3:CG33836"(gene name)|psi-mi:"His3:CG33836"(display_short)|uniprotkb:"His3:CG33839"(gene name)|psi-mi:"His3:CG33839"(display_short)|uniprotkb:"His3:CG33842"(gene name)|psi-mi:"His3:CG33842"(display_short)|uniprotkb:"His3:CG33845"(gene name)|psi-mi:"His3:CG33845"(display_short)|uniprotkb:"His3:CG33848"(gene name)|psi-mi:"His3:CG33848"(display_short)|uniprotkb:"His3:CG33851"(gene name)|psi-mi:"His3:CG33851"(display_short)|uniprotkb:"His3:CG33854"(gene name)|psi-mi:"His3:CG33854"(display_short) psi-mi:"MI:0096"(pull down) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:7227(drome)|taxid:7227("Drosophila melanogaster (Fruit fly)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870674|imex:IM-21746-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003583|refseq:NP_012488.3|mint:P47050|dip:DIP-2887N|ensemblfungi:YJL047C(gene)|ensemblfungi:YJL047C_mRNA(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007088"(regulation of mitotic nuclear division)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031297"(replication fork processing)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0070651"(nonfunctional rRNA decay)|interpro:IPR016158(Cullin homology)|interpro:IPR019559|interpro:IPR036317|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210 refseq:NP_001027285.1|refseq:NP_001027289.1|refseq:NP_001027294.1|refseq:NP_001027298.1|refseq:NP_001027303.1|refseq:NP_001027308.1|refseq:NP_001027313.1|refseq:NP_001027318.1|refseq:NP_001027323.1|refseq:NP_001027328.1|refseq:NP_001027333.1|refseq:NP_001027338.1|refseq:NP_001027343.1|refseq:NP_001027348.1|refseq:NP_001027353.1|refseq:NP_001027358.1|refseq:NP_001027363.1|refseq:NP_001027368.1|refseq:NP_001027373.1|refseq:NP_001027378.1|refseq:NP_001027383.1|refseq:NP_001027387.1|refseq:NP_724345.1|flybase:FBgn0001199|flybase:FBgn0051613|flybase:FBgn0053803|flybase:FBgn0053806|flybase:FBgn0053809|flybase:FBgn0053812|flybase:FBgn0053815|flybase:FBgn0053818|flybase:FBgn0053821|flybase:FBgn0053824|flybase:FBgn0053827|flybase:FBgn0053830|flybase:FBgn0053833|flybase:FBgn0053836|flybase:FBgn0053839|flybase:FBgn0053842|flybase:FBgn0053845|flybase:FBgn0053848|flybase:FBgn0053851|flybase:FBgn0053854|flybase:FBgn0053857|flybase:FBgn0053860|flybase:FBgn0053863|flybase:FBgn0053866|dip:DIP-38722N|ensemblmetazoa:FBgn0051613(gene)|ensemblmetazoa:FBgn0053803(gene)|ensemblmetazoa:FBgn0053806(gene)|ensemblmetazoa:FBgn0053809(gene)|ensemblmetazoa:FBgn0053812(gene)|ensemblmetazoa:FBgn0053815(gene)|ensemblmetazoa:FBgn0053818(gene)|ensemblmetazoa:FBgn0053821(gene)|ensemblmetazoa:FBgn0053824(gene)|ensemblmetazoa:FBgn0053827(gene)|ensemblmetazoa:FBgn0053830(gene)|ensemblmetazoa:FBgn0053833(gene)|ensemblmetazoa:FBgn0053836(gene)|ensemblmetazoa:FBgn0053839(gene)|ensemblmetazoa:FBgn0053842(gene)|ensemblmetazoa:FBgn0053845(gene)|ensemblmetazoa:FBgn0053848(gene)|ensemblmetazoa:FBgn0053851(gene)|ensemblmetazoa:FBgn0053854(gene)|ensemblmetazoa:FBgn0053857(gene)|ensemblmetazoa:FBgn0053860(gene)|ensemblmetazoa:FBgn0053863(gene)|ensemblmetazoa:FBgn0053866(gene)|ensemblmetazoa:FBtr0085894(transcript)|ensemblmetazoa:FBtr0091807(transcript)|ensemblmetazoa:FBtr0091810(transcript)|ensemblmetazoa:FBtr0091813(transcript)|ensemblmetazoa:FBtr0091816(transcript)|ensemblmetazoa:FBtr0091819(transcript)|ensemblmetazoa:FBtr0091822(transcript)|ensemblmetazoa:FBtr0091825(transcript)|ensemblmetazoa:FBtr0091828(transcript)|ensemblmetazoa:FBtr0091831(transcript)|ensemblmetazoa:FBtr0091834(transcript)|ensemblmetazoa:FBtr0091837(transcript)|ensemblmetazoa:FBtr0091840(transcript)|ensemblmetazoa:FBtr0091843(transcript)|ensemblmetazoa:FBtr0091846(transcript)|ensemblmetazoa:FBtr0091849(transcript)|ensemblmetazoa:FBtr0091852(transcript)|ensemblmetazoa:FBtr0091855(transcript)|ensemblmetazoa:FBtr0091858(transcript)|ensemblmetazoa:FBtr0091861(transcript)|ensemblmetazoa:FBtr0091864(transcript)|ensemblmetazoa:FBtr0091867(transcript)|ensemblmetazoa:FBtr0091870(transcript)|go:"GO:0000785"(chromatin)|go:"GO:0000786"(nucleosome)|go:"GO:0005634"(nucleus)|go:"GO:0005700"(polytene chromosome)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0035059"(RCAF complex)|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P02299|rcsb pdb:1KNA|rcsb pdb:1KNE|rcsb pdb:2NQB|rcsb pdb:2PYO|rcsb pdb:2YBA|rcsb pdb:4QLC|rcsb pdb:4UUZ|rcsb pdb:4X23|rcsb pdb:5WCU|rcsb pdb:6ASZ|rcsb pdb:6AT0|rcsb pdb:6DZT|rcsb pdb:6MHA|rcsb pdb:6PWE|rcsb pdb:6PWF|reactome:R-DME-1266695|reactome:R-DME-3214847|reactome:R-DME-3247509|reactome:R-DME-8936459|reactome:R-DME-983231 - crc64:A86A48F6DC6AF163 - figure legend:Fig. 1G, 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/11/21 2014/10/16 rogid:Dt2biHwRvkZgQNrr8j8T01QAdXQ559292 rogid:2TuVqWkeAnhHR4nrl0GNyUj1N3o7227 intact-crc:44BB3444C01F53D8|rigid:M/7tSZPHlMJTWFIARLU8Zs6t6cg false glutathione s tranferase tag:?-? N-acetylated L-lysine:57-57 - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P47050 uniprotkb:Q06211 intact:EBI-25861|uniprotkb:D6VWD7|ensemblfungi:YJL047C intact:EBI-38894|uniprotkb:D6W4G5|ensemblfungi:YPR164W psi-mi:cul8_yeast(display_long)|uniprotkb:RTT101(gene name)|psi-mi:RTT101(display_short)|uniprotkb:CUL8(gene name synonym)|uniprotkb:Cullin-C(gene name synonym)|uniprotkb:Regulator of Ty1 transposition protein 101(gene name synonym)|uniprotkb:J1166(orf name)|uniprotkb:YJL047C(locus name) psi-mi:mms1_yeast(display_long)|uniprotkb:Synthetically lethal with MCM10 protein 6(gene name synonym)|uniprotkb:Regulator of Ty1 transposition protein 108(gene name synonym)|uniprotkb:MMS1(gene name)|psi-mi:MMS1(display_short)|uniprotkb:KIM3(gene name synonym)|uniprotkb:SLM6(gene name synonym)|uniprotkb:RTT108(gene name synonym)|uniprotkb:YPR164W(locus name)|uniprotkb:Methyl methanesulfonate-sensitivity protein 1(gene name synonym) psi-mi:"MI:0096"(pull down) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8870674|imex:IM-21746-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003583|refseq:NP_012488.3|mint:P47050|dip:DIP-2887N|ensemblfungi:YJL047C(gene)|ensemblfungi:YJL047C_mRNA(transcript)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007049"(cell cycle)|go:"GO:0007088"(regulation of mitotic nuclear division)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031297"(replication fork processing)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0070651"(nonfunctional rRNA decay)|interpro:IPR016158(Cullin homology)|interpro:IPR019559|interpro:IPR036317|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210 sgd:S000006368|refseq:NP_015490.1|mint:Q06211|dip:DIP-6310N|ensemblfungi:YPR164W(gene)|ensemblfungi:YPR164W_mRNA(transcript)|go:"GO:0000725"(recombinational repair)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0031297"(replication fork processing)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0070651"(nonfunctional rRNA decay) - crc64:A86A48F6DC6AF163 crc64:CC698C422631A7D7 figure legend:Fig. 1G, 2D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/11/21 2014/10/16 rogid:Dt2biHwRvkZgQNrr8j8T01QAdXQ559292 rogid:/uLxndTAdpoXEanqM0IDRzaN7/0559292 intact-crc:44BB3444C01F53D8|rigid:M/7tSZPHlMJTWFIARLU8Zs6t6cg false glutathione s tranferase tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9UIV1 uniprotkb:P68431 intact:EBI-2105113|uniprotkb:A8MZM5|uniprotkb:Q7Z530|uniprotkb:D3DSP6|uniprotkb:B3KMP1|uniprotkb:B3KN35|uniprotkb:G3V108|ensembl:ENSP00000355279 intact:EBI-79722|ensembl:ENSP00000352252|ensembl:ENSP00000358160|ensembl:ENSP00000366999|ensembl:ENSP00000480826|ensembl:ENSP00000482271|ensembl:ENSP00000483283|ensembl:ENSP00000484095|ensembl:ENSP00000484638|ensembl:ENSP00000484658|ensembl:ENSP00000484841|ensembl:ENSP00000489282|intact:EBI-1560041|uniprotkb:A0PJT7|uniprotkb:P02295|uniprotkb:P02296|uniprotkb:P16106|uniprotkb:Q6ISV8|uniprotkb:Q6NWP8|uniprotkb:Q6NWP9|uniprotkb:Q6NXU4|uniprotkb:Q71DJ3|uniprotkb:Q93081|uniprotkb:A5PLR1 psi-mi:cnot7_human(display_long)|uniprotkb:CNOT7(gene name)|psi-mi:CNOT7(display_short)|uniprotkb:CAF1(gene name synonym)|uniprotkb:CCR4-associated factor 1(gene name synonym)|uniprotkb:BTG1-binding factor 1(gene name synonym)|uniprotkb:Caf1a(gene name synonym) psi-mi:h31_human(display_long)|uniprotkb:H3FA(gene name synonym)|uniprotkb:H3FL(gene name synonym)|uniprotkb:H3FD(gene name synonym)|uniprotkb:H3FI(gene name synonym)|uniprotkb:H3FH(gene name synonym)|uniprotkb:H3FK(gene name synonym)|uniprotkb:H3FF(gene name synonym)|uniprotkb:H3FJ(gene name synonym)|uniprotkb:H3FB(gene name synonym)|uniprotkb:Histone H3/a(gene name synonym)|uniprotkb:Histone H3/b(gene name synonym)|uniprotkb:Histone H3/c(gene name synonym)|uniprotkb:Histone H3/d(gene name synonym)|uniprotkb:Histone H3/f(gene name synonym)|uniprotkb:Histone H3/h(gene name synonym)|uniprotkb:Histone H3/i(gene name synonym)|uniprotkb:Histone H3/j(gene name synonym)|uniprotkb:Histone H3/k(gene name synonym)|uniprotkb:Histone H3/l(gene name synonym)|uniprotkb:H3C1(gene name)|psi-mi:H3C1(display_short)|uniprotkb:HIST1H3A(gene name synonym)|uniprotkb:H3C2(gene name)|psi-mi:H3C2(display_short)|uniprotkb:HIST1H3B(gene name synonym)|uniprotkb:H3C3(gene name)|psi-mi:H3C3(display_short)|uniprotkb:H3FC HIST1H3C(gene name synonym)|uniprotkb:H3C4(gene name)|psi-mi:H3C4(display_short)|uniprotkb:HIST1H3D(gene name synonym)|uniprotkb:H3C6(gene name)|psi-mi:H3C6(display_short)|uniprotkb:HIST1H3E(gene name synonym)|uniprotkb:H3C7(gene name)|psi-mi:H3C7(display_short)|uniprotkb:HIST1H3F(gene name synonym)|uniprotkb:H3C8(gene name)|psi-mi:H3C8(display_short)|uniprotkb:HIST1H3G(gene name synonym)|uniprotkb:H3C10(gene name)|psi-mi:H3C10(display_short)|uniprotkb:HIST1H3H(gene name synonym)|uniprotkb:H3C11(gene name)|psi-mi:H3C11(display_short)|uniprotkb:HIST1H3I(gene name synonym)|uniprotkb:H3C12(gene name)|psi-mi:H3C12(display_short)|uniprotkb:HIST1H3J(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8873239|imex:IM-21746-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001309026.1|refseq:NP_001309028.1|refseq:NP_001309029.1|refseq:NP_001309016.1|refseq:NP_001309017.1|refseq:NP_001309018.1|refseq:NP_001309019.1|refseq:NP_001309020.1|refseq:NP_001309021.1|refseq:NP_001309022.1|refseq:NP_001309023.1|refseq:NP_001309024.1|refseq:NP_001309025.1|refseq:NP_037486.2|refseq:NP_473367.2|refseq:XP_005273538.1|refseq:NP_001309027.1|dip:DIP-41902N|ensembl:ENSG00000198791(gene)|ensembl:ENST00000361272(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000932"(P-body)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0003723"(RNA binding)|go:"GO:0004532"(exoribonuclease activity)|go:"GO:0004535"("poly(A)-specific ribonuclease activity")|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008284"(positive regulation of cell population proliferation)|go:"GO:0008285"(negative regulation of cell population proliferation)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0016020"(membrane)|go:"GO:0016604"(nuclear body)|go:"GO:0016607"(nuclear speck)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030014"(CCR4-NOT complex)|go:"GO:0030015"(CCR4-NOT core complex)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0033962"(P-body assembly)|go:"GO:0035195"(gene silencing by miRNA)|go:"GO:0042509"(regulation of tyrosine phosphorylation of STAT protein)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0045070"(positive regulation of viral genome replication)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046872"(metal ion binding)|go:"GO:0051607"(defense response to virus)|go:"GO:0060213"("positive regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0060339"(negative regulation of type I interferon-mediated signaling pathway)|go:"GO:0061014"(positive regulation of mRNA catabolic process)|go:"GO:1900153"(positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|interpro:IPR006941(Ribonuclease CAF1)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR036397|interpro:IPR039636|interpro:IPR039637|mint:Q9UIV1|rcsb pdb:2D5R|rcsb pdb:4GMJ|rcsb pdb:7AX1|reactome:R-HSA-429947|reactome:R-HSA-6804115 rcsb pdb:4TN7|rcsb pdb:4U68|rcsb pdb:4UP0|rcsb pdb:4UY4|rcsb pdb:4X3K|rcsb pdb:4Y6L|rcsb pdb:4YHP|rcsb pdb:4YHZ|rcsb pdb:4YM5|rcsb pdb:4YM6|rcsb pdb:4Z0R|rcsb pdb:4Z2M|rcsb pdb:5AV5|rcsb pdb:5AV6|rcsb pdb:5AV8|rcsb pdb:5AV9|rcsb pdb:4QBS|rcsb pdb:5AVB|rcsb pdb:5AVC|rcsb pdb:5B24|rcsb pdb:5B2I|rcsb pdb:5B31|rcsb pdb:5C11|rcsb pdb:5C13|rcsb pdb:5C3I|rcsb pdb:5CPI|rcsb pdb:5CPJ|rcsb pdb:5CPK|rcsb pdb:5D6Y|rcsb pdb:5DAH|rcsb pdb:5FB0|rcsb pdb:5FB1|rcsb pdb:5FFV|rcsb pdb:5GH9|rcsb pdb:5GSE|rcsb pdb:5GSU|rcsb pdb:5GT0|rcsb pdb:5GT3|rcsb pdb:5GTC|rcsb pdb:5H6Q|rcsb pdb:5H6R|rcsb pdb:5HJB|rcsb pdb:5HJC|rcsb pdb:5HJD|rcsb pdb:5HYN|rcsb pdb:5IQL|rcsb pdb:5J3V|rcsb pdb:5J9S|rcsb pdb:5JHN|rcsb pdb:5JIN|rcsb pdb:5JIY|rcsb pdb:5JJ0|rcsb pdb:5B2J|rcsb pdb:5JRG|rcsb pdb:5KJH|rcsb pdb:5KJI|rcsb pdb:5KKL|rcsb pdb:5LUG|rcsb pdb:5M5G|rcsb pdb:5MR8|rcsb pdb:5NNC|rcsb pdb:5OY3|rcsb pdb:5SVX|rcsb pdb:5SVY|rcsb pdb:5SZB|rcsb pdb:5SZC|rcsb pdb:5T0K|rcsb pdb:5T0M|rcsb pdb:5T1G|rcsb pdb:5T1I|rcsb pdb:5T8R|rcsb pdb:5TBN|rcsb pdb:5TDR|rcsb pdb:5TDW|rcsb pdb:5U2J|rcsb pdb:5V21|rcsb pdb:5V22|rcsb pdb:5VA6|rcsb pdb:5VAB|rcsb pdb:5VGE|rcsb pdb:5VNB|rcsb pdb:5NND|rcsb pdb:5WLE|rcsb pdb:5WVO|rcsb pdb:5WXG|rcsb pdb:5WXH|rcsb pdb:5WYI|rcsb pdb:5X60|rcsb pdb:5XF3|rcsb pdb:5XF4|rcsb pdb:5XF5|rcsb pdb:5XFQ|rcsb pdb:5XFR|rcsb pdb:5XNV|rcsb pdb:5XTZ|rcsb pdb:5Y0C|rcsb pdb:5Y0D|rcsb pdb:5Y20|rcsb pdb:5Y2F|rcsb pdb:5Z23|rcsb pdb:5Z30|rcsb pdb:6AXJ|rcsb pdb:6AZE|rcsb pdb:6BHD|rcsb pdb:6BHE|rcsb pdb:6BHG|rcsb pdb:6BHH|rcsb pdb:6BHI|rcsb pdb:6D07|rcsb pdb:6D08|rcsb pdb:6E83|rcsb pdb:6E86|rcsb pdb:5WFC|rcsb pdb:6F6D|rcsb pdb:6HTS|rcsb pdb:6IEU|rcsb pdb:6IIS|rcsb pdb:6IIT|rcsb pdb:6IPU|rcsb pdb:6IQ4|rcsb pdb:6JOU|rcsb pdb:6JR0|rcsb pdb:6JR1|rcsb pdb:6JXD|rcsb pdb:6K1I|rcsb pdb:6K1J|rcsb pdb:6K1K|rcsb pdb:6KE9|rcsb pdb:6KVD|rcsb pdb:6L49|rcsb pdb:6L4A|rcsb pdb:6L9H|rcsb pdb:6L9Z|rcsb pdb:6LA2|rcsb pdb:6LA8|rcsb pdb:6LA9|rcsb pdb:6LAB|rcsb pdb:6LE9|rcsb pdb:6LER|rcsb pdb:6LS6|rcsb pdb:6LSD|rcsb pdb:6M3V|rcsb pdb:6M44|rcsb pdb:6M4D|rcsb pdb:6M4G|rcsb pdb:6M4H|rcsb pdb:6MIL|rcsb pdb:6MIM|rcsb pdb:6MIN|rcsb pdb:6MIO|rcsb pdb:6MIQ|rcsb pdb:6PA1|rcsb pdb:6PAG|rcsb pdb:6HKT|rcsb pdb:6R8Y|rcsb pdb:6R8Z|rcsb pdb:6R90|rcsb pdb:6R91|rcsb pdb:6R93|rcsb pdb:6R94|rcsb pdb:6T90|rcsb pdb:6T93|rcsb pdb:6UPK|rcsb pdb:6UPL|rcsb pdb:6USJ|rcsb pdb:6V2H|rcsb pdb:6V2K|rcsb pdb:6V3N|rcsb pdb:6V41|rcsb pdb:6V92|rcsb pdb:6VIL|rcsb pdb:6WAV|rcsb pdb:6WW4|rcsb pdb:6YIF|rcsb pdb:6YIH|rcsb pdb:6YOV|rcsb pdb:7BWD|rcsb pdb:7C0M|rcsb pdb:7CCQ|rcsb pdb:6R92|rcsb pdb:7CCR|rcsb pdb:7D1Z|rcsb pdb:7DBP|rcsb pdb:7K5X|rcsb pdb:7K5Y|rcsb pdb:7K60|rcsb pdb:7K61|rcsb pdb:7K63|rcsb pdb:7KLR|rcsb pdb:7LYC|reactome:R-HSA-1266695|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-3214815|reactome:R-HSA-3214841|reactome:R-HSA-3214842|reactome:R-HSA-3214847|reactome:R-HSA-3214858|ensembl:ENSG00000197153(gene)|ensembl:ENSG00000197409(gene)|ensembl:ENSG00000273983(gene)|ensembl:ENSG00000274750(gene)|ensembl:ENSG00000275379(gene)|ensembl:ENSG00000275714(gene)|ensembl:ENSG00000277775(gene)|ensembl:ENSG00000278828(gene)|ensembl:ENSG00000286522(gene)|ensembl:ENSG00000287080(gene)|ensembl:ENST00000356476(transcript)|ensembl:ENST00000359303(transcript)|ensembl:ENST00000369163(transcript)|ensembl:ENST00000612966(transcript)|ensembl:ENST00000613854(transcript)|ensembl:ENST00000614378(transcript)|ensembl:ENST00000614911(transcript)|ensembl:ENST00000616365(transcript)|ensembl:ENST00000618052(transcript)|ensembl:ENST00000621411(transcript)|ensembl:ENST00000634733(transcript)|reactome:R-HSA-427359|reactome:R-HSA-427389|reactome:R-HSA-427413|reactome:R-HSA-5250924|reactome:R-HSA-5334118|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9609690|reactome:R-HSA-9610379|reactome:R-HSA-9616222|reactome:R-HSA-3247509|reactome:R-HSA-9710421|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0045296"(cadherin binding)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0060968"(obsolete regulation of gene silencing)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|go:"GO:0000786"(nucleosome)|go:"GO:0003677"(DNA binding)|interpro:IPR009072(Histone-fold)|mint:P68431|rcsb pdb:1CS9|rcsb pdb:1CT6|rcsb pdb:1O9S|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|rcsb pdb:1Q3L|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|rcsb pdb:2B2T|go:"GO:0006335"(DNA replication-dependent chromatin assembly)|rcsb pdb:2B2U|rcsb pdb:2B2V|rcsb pdb:2B2W|rcsb pdb:2C1J|rcsb pdb:2C1N|go:"GO:0016020"(membrane)|rcsb pdb:2CO0|rcsb pdb:2CV5|rcsb pdb:2FSA|rcsb pdb:2KWJ|rcsb pdb:2KWK|rcsb pdb:2L75|rcsb pdb:2LBM|rcsb pdb:2LGG|rcsb pdb:2M0O|reactome:R-HSA-983231|reactome:R-HSA-977225|rcsb pdb:2NDG|rcsb pdb:2OQ6|rcsb pdb:2OT7|rcsb pdb:2OX0|rcsb pdb:2RI7|rcsb pdb:2RR4|rcsb pdb:2UXN|rcsb pdb:2V85|rcsb pdb:2V89|rcsb pdb:2VNF|rcsb pdb:2VPG|rcsb pdb:2X0L|rcsb pdb:3A1B|rcsb pdb:2NDF|rcsb pdb:3AFA|rcsb pdb:3AVR|rcsb pdb:3AYW|rcsb pdb:3AZE|rcsb pdb:3AZF|rcsb pdb:3AZG|rcsb pdb:3AZH|rcsb pdb:3AZI|rcsb pdb:3AZJ|rcsb pdb:3AZL|rcsb pdb:3AZM|rcsb pdb:3AZN|rcsb pdb:3B95|rcsb pdb:3FDT|rcsb pdb:3KMT|rcsb pdb:3KQI|rcsb pdb:3LQI|rcsb pdb:3LQJ|rcsb pdb:3MP1|rcsb pdb:3O34|rcsb pdb:3O35|rcsb pdb:3O37|rcsb pdb:3QJ6|rcsb pdb:3RIG|rcsb pdb:3RIY|rcsb pdb:3SOU|rcsb pdb:3SOW|rcsb pdb:3U31|rcsb pdb:3U3D|rcsb pdb:3U4S|rcsb pdb:3U5N|rcsb pdb:3U5O|rcsb pdb:3AZK|rcsb pdb:3U5P|rcsb pdb:3UEE|rcsb pdb:3UEF|rcsb pdb:3UII|rcsb pdb:3UIK|rcsb pdb:3V43|rcsb pdb:3W96|rcsb pdb:3W97|rcsb pdb:3W98|rcsb pdb:3W99|rcsb pdb:3WA9|rcsb pdb:3WAA|rcsb pdb:3WKJ|rcsb pdb:3X1S|rcsb pdb:3X1T|rcsb pdb:3X1U|rcsb pdb:3X1V|rcsb pdb:3ZG6|rcsb pdb:3ZVY|rcsb pdb:4A0J|rcsb pdb:4A0N|rcsb pdb:4A7J|rcsb pdb:3UIG|rcsb pdb:4BD3|rcsb pdb:4C1Q|rcsb pdb:4F4U|rcsb pdb:4F56|rcsb pdb:4FWF|rcsb pdb:4HON|rcsb pdb:4I51|rcsb pdb:4L7X|rcsb pdb:4LK9|rcsb pdb:4LKA|rcsb pdb:4LLB|rcsb pdb:4LXL|rcsb pdb:4N4H|rcsb pdb:4QBQ|rcsb pdb:4QBR|refseq:NP_003520.1|refseq:NP_003521.2|refseq:NP_003522.1|refseq:NP_003523.1|refseq:NP_003524.1|refseq:NP_003525.1|refseq:NP_003526.1|refseq:NP_003527.1|refseq:NP_003528.1|refseq:NP_066298.1|dip:DIP-29371N - - - figure legend:Figs. 7E, 7F, Supp. FIg. 6F, 6G|comment:Depletion of Cul4Aand DDB1 led to a marked reduction in the interaction between H3.1 and CAF-1|comment:CAF-1 was identified as both a p150 and p60 species.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2013/11/21 2014/10/16 rogid:+bu5LFmE8SFVSqNkFf91SSN3kVI9606 rogid:ood0OohxZHuhsWZtO7U7GMc+LwM9606 intact-crc:9409642798D5DB7C|rigid:2Wm22HYlnxwPWsBDsTMMzmYkUjA false - flag tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P84243 uniprotkb:Q9UER7 intact:EBI-120658|uniprotkb:P06351|uniprotkb:P33155|uniprotkb:Q5VV55|uniprotkb:Q5VV56|uniprotkb:Q66I33|uniprotkb:Q9V3W4|ensembl:ENSP00000254810|ensembl:ENSP00000355778|ensembl:ENSP00000355780|ensembl:ENSP00000355781|ensembl:ENSP00000465813|ensembl:ENSP00000466020|ensembl:ENSP00000468714|ensembl:ENSP00000499275|ensembl:ENSP00000499385|ensembl:ENSP00000499800 intact:EBI-77321|ensembl:ENSP00000266000|ensembl:ENSP00000363668|ensembl:ENSP00000372539|ensembl:ENSP00000372681|ensembl:ENSP00000382014|ensembl:ENSP00000382281|ensembl:ENSP00000394108|ensembl:ENSP00000404376|ensembl:ENSP00000404623|ensembl:ENSP00000410772|uniprotkb:O14747|uniprotkb:O15141|uniprotkb:O15208|uniprotkb:Q9BWI3|uniprotkb:B4E1I3|uniprotkb:F5H082|uniprotkb:Q5STK9|uniprotkb:F5ANJ6|uniprotkb:F5ANJ7 psi-mi:h33_human(display_long)|uniprotkb:H3-3A(gene name)|psi-mi:H3-3A(display_short)|uniprotkb:H3-3B(gene name)|psi-mi:H3-3B(display_short)|uniprotkb:H3.3A(gene name synonym)|uniprotkb:H3.3B(gene name synonym)|uniprotkb:H3F3(gene name synonym)|uniprotkb:H3F3A(gene name synonym)|uniprotkb:H3F3B(gene name synonym)|uniprotkb:PP781(orf name) psi-mi:daxx_human(display_long)|uniprotkb:DAXX(gene name)|psi-mi:DAXX(display_short)|uniprotkb:BING2(gene name synonym)|uniprotkb:DAP6(gene name synonym)|uniprotkb:Daxx(gene name synonym)|uniprotkb:Fas death domain-associated protein(gene name synonym)|uniprotkb:ETS1-associated protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8873269|imex:IM-21746-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002098.1|refseq:NP_005315.1|rcsb pdb:4H9N|rcsb pdb:3QL9|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:3QLA|rcsb pdb:3QLC|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4L58|rcsb pdb:4N4I|rcsb pdb:3WTP|rcsb pdb:4O62|rcsb pdb:4QQ4|rcsb pdb:4TMP|rcsb pdb:4GNE|rcsb pdb:4GNF|rcsb pdb:4U7T|rcsb pdb:4GNG|rcsb pdb:4W5A|rcsb pdb:4GU0|rcsb pdb:4GUR|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:4GUS|rcsb pdb:4GY5|rcsb pdb:5DWQ|rcsb pdb:5DX0|rcsb pdb:5JA4|rcsb pdb:5JJY|ensembl:ENSG00000132475(gene)|ensembl:ENSG00000163041(gene)|rcsb pdb:5JLB|rcsb pdb:5KDM|rcsb pdb:5X7X|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6HGT|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6J9J|rcsb pdb:6PZV|rcsb pdb:6QXZ|rcsb pdb:6R0C|rcsb pdb:6RNY|rcsb pdb:6U04|rcsb pdb:7A08|reactome:R-HSA-427413|rcsb pdb:7CIZ|reactome:R-HSA-5250924|reactome:R-HSA-5334118|rcsb pdb:7CJ0|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-983231|rcsb pdb:7CWH|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-427359|reactome:R-HSA-427389|ensembl:ENST00000254810(transcript)|ensembl:ENST00000366813(transcript)|ensembl:ENST00000366815(transcript)|ensembl:ENST00000366816(transcript)|ensembl:ENST00000586607(transcript)|ensembl:ENST00000587560(transcript)|ensembl:ENST00000589599(transcript)|ensembl:ENST00000655399(transcript)|ensembl:ENST00000661429(transcript)|ensembl:ENST00000666609(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P84243|rcsb pdb:2L43|rcsb pdb:3ASK|rcsb pdb:3ASL|rcsb pdb:3AV2|rcsb pdb:3JVK|rcsb pdb:3MUK|rcsb pdb:3MUL|dip:DIP-40046N ensembl:ENSG00000206206(gene)|ensembl:ENSG00000206279(gene)|ensembl:ENSG00000227046(gene)|ensembl:ENSG00000231617(gene)|ensembl:ENSG00000204209(gene)|ensembl:ENST00000266000(transcript)|ensembl:ENST00000374542(transcript)|ensembl:ENST00000383062(transcript)|ensembl:ENST00000383194(transcript)|ensembl:ENST00000399060(transcript)|ensembl:ENST00000399344(transcript)|ensembl:ENST00000433482(transcript)|ensembl:ENST00000436311(transcript)|ensembl:ENST00000445009(transcript)|ensembl:ENST00000455860(transcript)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0002039"(p53 binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007257"(obsolete activation of JUN kinase activity)|go:"GO:0008134"(transcription factor binding)|go:"GO:0008625"(extrinsic apoptotic signaling pathway via death domain receptors)|go:"GO:0016604"(nuclear body)|go:"GO:0016605"(PML body)|go:"GO:0019899"(enzyme binding)|go:"GO:0019901"(protein kinase binding)|go:"GO:0034605"(cellular response to heat)|go:"GO:0030295"(protein kinase activator activity)|go:"GO:0030521"(androgen receptor signaling pathway)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0031396"(regulation of protein ubiquitination)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042393"(histone binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0042981"(regulation of apoptotic process)|go:"GO:0045860"(positive regulation of protein kinase activity)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0050681"(androgen receptor binding)|go:"GO:0071276"(cellular response to cadmium ion)|go:"GO:0071280"(cellular response to copper ion)|go:"GO:0072738"(cellular response to diamide)|go:"GO:0140037"(sumo-dependent protein binding)|go:"GO:0140416"(transcription regulator inhibitor activity)|go:"GO:1901216"(positive regulation of neuron death)|go:"GO:1903936"(cellular response to sodium arsenite)|interpro:IPR005012(Daxx protein)|interpro:IPR031333|interpro:IPR038298|mint:Q9UER7|rcsb pdb:2KQS|rcsb pdb:2KZS|rcsb pdb:2KZU|rcsb pdb:4H9N|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:5GRQ|rcsb pdb:5KDM|rcsb pdb:5Y18|rcsb pdb:5Y6O|reactome:R-HSA-3899300|reactome:R-HSA-6804757|reactome:R-HSA-9609690|reactome:R-HSA-9670095|reactome:R-HSA-9670613|reactome:R-HSA-9670615|refseq:NP_001135441.1|refseq:NP_001341.1|refseq:NP_001241646.1|dip:DIP-27628N - - - figure legend:Fig. 7E, 7F, Supp. Fig 6F, 6G|comment:Depletion of Cul4A and DDB1 led to a marked reduction in the interaction between H3.3 and its specific chaperones Daxx and HIRA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2013/11/21 2014/10/16 rogid:cRqA5/IBNfIbbxAnbwLqzXip20I9606 rogid:lM3F/1ay7qvt8NkGWvgfSvBX1qQ9606 intact-crc:C4F33BECB446615D|rigid:mwcHX+laByCUVOqZWmRIUSz96nE false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:P84243 uniprotkb:P54198 intact:EBI-120658|uniprotkb:P06351|uniprotkb:P33155|uniprotkb:Q5VV55|uniprotkb:Q5VV56|uniprotkb:Q66I33|uniprotkb:Q9V3W4|ensembl:ENSP00000254810|ensembl:ENSP00000355778|ensembl:ENSP00000355780|ensembl:ENSP00000355781|ensembl:ENSP00000465813|ensembl:ENSP00000466020|ensembl:ENSP00000468714|ensembl:ENSP00000499275|ensembl:ENSP00000499385|ensembl:ENSP00000499800 intact:EBI-372342|uniprotkb:Q05BU9|uniprotkb:Q8IXN2|ensembl:ENSP00000263208 psi-mi:h33_human(display_long)|uniprotkb:H3-3A(gene name)|psi-mi:H3-3A(display_short)|uniprotkb:H3-3B(gene name)|psi-mi:H3-3B(display_short)|uniprotkb:H3.3A(gene name synonym)|uniprotkb:H3.3B(gene name synonym)|uniprotkb:H3F3(gene name synonym)|uniprotkb:H3F3A(gene name synonym)|uniprotkb:H3F3B(gene name synonym)|uniprotkb:PP781(orf name) psi-mi:hira_human(display_long)|uniprotkb:HIRA(gene name)|psi-mi:HIRA(display_short)|uniprotkb:TUP1-like enhancer of split protein 1(gene name synonym)|uniprotkb:DGCR1(gene name synonym)|uniprotkb:HIR(gene name synonym)|uniprotkb:TUPLE1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Han et al. (2013) pubmed:24209620|imex:IM-21746 taxid:9606(human)|taxid:9606(Homo sapiens) taxid:9606(human)|taxid:9606(Homo sapiens) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-8873269|imex:IM-21746-11 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_002098.1|refseq:NP_005315.1|rcsb pdb:4H9N|rcsb pdb:3QL9|rcsb pdb:4H9O|rcsb pdb:4H9P|rcsb pdb:4H9Q|rcsb pdb:3QLA|rcsb pdb:3QLC|rcsb pdb:4H9R|rcsb pdb:4H9S|rcsb pdb:4HGA|rcsb pdb:4L58|rcsb pdb:4N4I|rcsb pdb:3WTP|rcsb pdb:4O62|rcsb pdb:4QQ4|rcsb pdb:4TMP|rcsb pdb:4GNE|rcsb pdb:4GNF|rcsb pdb:4U7T|rcsb pdb:4GNG|rcsb pdb:4W5A|rcsb pdb:4GU0|rcsb pdb:4GUR|rcsb pdb:5B32|rcsb pdb:5B33|rcsb pdb:5BNV|rcsb pdb:5BNX|rcsb pdb:4GUS|rcsb pdb:4GY5|rcsb pdb:5DWQ|rcsb pdb:5DX0|rcsb pdb:5JA4|rcsb pdb:5JJY|ensembl:ENSG00000132475(gene)|ensembl:ENSG00000163041(gene)|rcsb pdb:5JLB|rcsb pdb:5KDM|rcsb pdb:5X7X|rcsb pdb:6A5L|rcsb pdb:6A5O|rcsb pdb:6A5P|rcsb pdb:6A5R|rcsb pdb:6A5T|rcsb pdb:6A5U|rcsb pdb:6HGT|rcsb pdb:6INQ|rcsb pdb:6IR9|rcsb pdb:6J4W|rcsb pdb:6J4X|rcsb pdb:6J4Y|rcsb pdb:6J4Z|rcsb pdb:6J50|rcsb pdb:6J51|rcsb pdb:6J9J|rcsb pdb:6PZV|rcsb pdb:6QXZ|rcsb pdb:6R0C|rcsb pdb:6RNY|rcsb pdb:6U04|rcsb pdb:7A08|reactome:R-HSA-427413|rcsb pdb:7CIZ|reactome:R-HSA-5250924|reactome:R-HSA-5334118|rcsb pdb:7CJ0|reactome:R-HSA-5578749|reactome:R-HSA-5617472|reactome:R-HSA-5625886|reactome:R-HSA-73728|reactome:R-HSA-73772|reactome:R-HSA-8936459|reactome:R-HSA-8939236|reactome:R-HSA-9018519|reactome:R-HSA-912446|reactome:R-HSA-9616222|reactome:R-HSA-9670095|reactome:R-HSA-9710421|reactome:R-HSA-977225|reactome:R-HSA-983231|rcsb pdb:7CWH|reactome:R-HSA-1912408|reactome:R-HSA-201722|reactome:R-HSA-212300|reactome:R-HSA-2299718|reactome:R-HSA-2559580|reactome:R-HSA-2559582|reactome:R-HSA-427359|reactome:R-HSA-427389|ensembl:ENST00000254810(transcript)|ensembl:ENST00000366813(transcript)|ensembl:ENST00000366815(transcript)|ensembl:ENST00000366816(transcript)|ensembl:ENST00000586607(transcript)|ensembl:ENST00000587560(transcript)|ensembl:ENST00000589599(transcript)|ensembl:ENST00000655399(transcript)|ensembl:ENST00000661429(transcript)|ensembl:ENST00000666609(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000786"(nucleosome)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005576"(extracellular region)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0030307"(positive regulation of cell growth)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0032200"(telomere organization)|go:"GO:0032991"(protein-containing complex)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0070062"(extracellular exosome)|interpro:IPR000164(Histone H3)|interpro:IPR007125(Histone core)|interpro:IPR009072(Histone-fold)|mint:P84243|rcsb pdb:2L43|rcsb pdb:3ASK|rcsb pdb:3ASL|rcsb pdb:3AV2|rcsb pdb:3JVK|rcsb pdb:3MUK|rcsb pdb:3MUL|dip:DIP-40046N refseq:NP_003316.3|dip:DIP-29240N|ensembl:ENSG00000100084(gene)|ensembl:ENST00000263208(transcript)|go:"GO:0000417"(HIR complex)|go:"GO:0000785"(chromatin)|go:"GO:0003714"(transcription corepressor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006336"(DNA replication-independent chromatin assembly)|go:"GO:0006351"(transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0009653"(anatomical structure morphogenesis)|go:"GO:0016605"(PML body)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042393"(histone binding)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070062"(extracellular exosome)|interpro:IPR001680(WD40 repeat)|interpro:IPR011494(TUP1-like enhancer of split)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR031120|interpro:IPR036322|mint:P54198|rcsb pdb:2I32|rcsb pdb:5YJE|reactome:R-HSA-2559584 - - - figure legend:Fig. 7E, 7F, Supp. Fig 6F, 6G|comment:Depletion of Cul4A and DDB1 led to a marked reduction in the interaction between H3.3 and its specific chaperones Daxx and HIRA.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:9606(human-hela)|taxid:9606(Homo sapiens epitheloid cervix carcinoma cells) - 2013/11/21 2014/10/16 rogid:cRqA5/IBNfIbbxAnbwLqzXip20I9606 rogid:en6l6z4CNWhF4Wlj5ou4DDTfETg9606 intact-crc:C4F33BECB446615D|rigid:mwcHX+laByCUVOqZWmRIUSz96nE false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot)