#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P40458	uniprotkb:P15790	intact:EBI-25256|uniprotkb:D6VVE1|ensemblfungi:YIL146C	intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7	psi-mi:atg32_yeast(display_long)|uniprotkb:YIL146C(locus name)|uniprotkb:ATG32(gene name)|psi-mi:ATG32(display_short)|uniprotkb:Extracellular mutant protein 37(gene name synonym)|uniprotkb:ECM17(gene name synonym)	psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short)	psi-mi:"MI:0096"(pull down)	Kanki et al. (2013)	imex:IM-21768|pubmed:23897086	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0471"(MINT)	intact:EBI-9004818|imex:IM-21768-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000001408|refseq:NP_012120.1|mint:P40458|ensemblfungi:YIL146C(gene)|ensemblfungi:YIL146C_mRNA(transcript)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005739"(mitochondrion)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0031307"(integral component of mitochondrial outer membrane)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0034045"(phagophore assembly site membrane)|rcsb pdb:3VXW|rcsb pdb:5WLP	refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N	-	-	crc64:6A1A7F1BF47250C9	figure legend:f4d sf8b sf8c|comment:"we expressed ProA only (negative control) or  ProA-Atg32 and HA-Cka1 in WT cells and performed protein A  affinity isolation. Although HA-Cka1 barely co-precipitated with  ProA-Atg32 when cultured in synthetic minimal medium  with glucose (SMD), HA-Cka1 co-precipitated with ProA-Atg32  after nitrogen starvation (Fig 4D, SD-N). Similarly, HA-Ckb1 also  co-precipitated with ProA-Atg32 during nitrogen starvation  (supplementary Fig S8A online). This Atg32–CK2 interaction  was not affected by Atg32-2SA mutation (supplementary  Fig S8B online)."|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2013/12/02	2014/10/16	rogid:G9JgaFYrrwsKy0QZ9O1/L2CHXH8559292	rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292	intact-crc:921DC777C7F02289|rigid:jINYNe8B2i9705B78IIYnpGL56k	false	protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P40458	uniprotkb:Q12527	intact:EBI-25256|uniprotkb:D6VVE1|ensemblfungi:YIL146C	intact:EBI-31977|uniprotkb:D6W457|ensemblfungi:YPR049C	psi-mi:atg32_yeast(display_long)|uniprotkb:YIL146C(locus name)|uniprotkb:ATG32(gene name)|psi-mi:ATG32(display_short)|uniprotkb:Extracellular mutant protein 37(gene name synonym)|uniprotkb:ECM17(gene name synonym)	psi-mi:atg11_yeast(display_long)|uniprotkb:Cytoplasm to vacuole targeting protein 9(gene name synonym)|uniprotkb:ATG11(gene name)|psi-mi:ATG11(display_short)|uniprotkb:CVT9(gene name synonym)|uniprotkb:YPR049C(locus name)|uniprotkb:YP9499.07c(orf name)	psi-mi:"MI:0096"(pull down)	Kanki et al. (2013)	imex:IM-21768|pubmed:23897086	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0471"(MINT)	intact:EBI-9004842|imex:IM-21768-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	sgd:S000001408|refseq:NP_012120.1|mint:P40458|ensemblfungi:YIL146C(gene)|ensemblfungi:YIL146C_mRNA(transcript)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005739"(mitochondrion)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0031307"(integral component of mitochondrial outer membrane)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0034045"(phagophore assembly site membrane)|rcsb pdb:3VXW|rcsb pdb:5WLP	refseq:NP_015374.1|sgd:S000006253|dip:DIP-1492N|mint:Q12527|ensemblfungi:YPR049C(gene)|ensemblfungi:YPR049C_mRNA(transcript)|go:"GO:0000045"(autophagosome assembly)|go:"GO:0000149"(SNARE binding)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0001934"(positive regulation of protein phosphorylation)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0006914"(autophagy)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0019901"(protein kinase binding)|go:"GO:0030242"(autophagy of peroxisome)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0034045"(phagophore assembly site membrane)|go:"GO:0034497"(protein localization to phagophore assembly site)|go:"GO:0034629"|go:"GO:0034727"(piecemeal microautophagy of the nucleus)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061709"(reticulophagy)|go:"GO:0140255"(regulation of cellular response to phosphate starvation)|go:"GO:1990316"(Atg1/ULK1 kinase complex)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR019460|interpro:IPR040040|rcsb pdb:6VZF|reactome:R-SCE-1632852	-	-	crc64:A904B92E9AE79449	figure legend:sf5a sf5b|comment:"we expressed ProA only (negative control) or  ProA-Atg32 and HA-Cka1 in WT cells and performed protein A  affinity isolation. Although HA-Cka1 barely co-precipitated with  ProA-Atg32 when cultured in synthetic minimal medium  with glucose (SMD), HA-Cka1 co-precipitated with ProA-Atg32  after nitrogen starvation (Fig 4D, SD-N). Similarly, HA-Ckb1 also  co-precipitated with ProA-Atg32 during nitrogen starvation  (supplementary Fig S8A online). This Atg32–CK2 interaction  was not affected by Atg32-2SA mutation (supplementary  Fig S8B online)."|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2013/12/02	2014/10/16	rogid:G9JgaFYrrwsKy0QZ9O1/L2CHXH8559292	rogid:26PElwvrl3YKwoQU7YdkmR0ln3o559292	intact-crc:683A5217EC2BB176|rigid:0LpRhgL9r+RhJgiZlC3R5TUrVCE	false	protein a tag:?-?	ha tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P43639	uniprotkb:P40458	intact:EBI-9563|uniprotkb:Q9URG5|ensemblfungi:YGL019W|uniprotkb:D6VUB8	intact:EBI-25256|uniprotkb:D6VVE1|ensemblfungi:YIL146C	psi-mi:csk2b_yeast(display_long)|uniprotkb:CKB1(gene name)|psi-mi:CKB1(display_short)|uniprotkb:YGL019W(locus name)	psi-mi:atg32_yeast(display_long)|uniprotkb:YIL146C(locus name)|uniprotkb:ATG32(gene name)|psi-mi:ATG32(display_short)|uniprotkb:Extracellular mutant protein 37(gene name synonym)|uniprotkb:ECM17(gene name synonym)	psi-mi:"MI:0096"(pull down)	Kanki et al. (2013)	imex:IM-21768|pubmed:23897086	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0471"(MINT)	intact:EBI-9004829|imex:IM-21768-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0498"(prey)	psi-mi:"MI:0496"(bait)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	ensemblfungi:YGL019W(gene)|ensemblfungi:YGL019W_mRNA(transcript)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005737"(cytoplasm)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0019887"(protein kinase regulator activity)|go:"GO:0030291"(protein serine/threonine kinase inhibitor activity)|go:"GO:0034456"(UTP-C complex)|go:"GO:0080163"(regulation of protein serine/threonine phosphatase activity)|interpro:IPR000704(Casein kinase II, regulatory subunit)|interpro:IPR035991|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|refseq:NP_011496.3|sgd:S000002987|mint:P43639|dip:DIP-282N	sgd:S000001408|refseq:NP_012120.1|mint:P40458|ensemblfungi:YIL146C(gene)|ensemblfungi:YIL146C_mRNA(transcript)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005739"(mitochondrion)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0031307"(integral component of mitochondrial outer membrane)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0034045"(phagophore assembly site membrane)|rcsb pdb:3VXW|rcsb pdb:5WLP	-	crc64:9ACA8D285E6990AF	-	figure legend:sf8a|comment:"we expressed ProA only (negative control) or  ProA-Atg32 and HA-Cka1 in WT cells and performed protein A  affinity isolation. Although HA-Cka1 barely co-precipitated with  ProA-Atg32 when cultured in synthetic minimal medium  with glucose (SMD), HA-Cka1 co-precipitated with ProA-Atg32  after nitrogen starvation (Fig 4D, SD-N). Similarly, HA-Ckb1 also  co-precipitated with ProA-Atg32 during nitrogen starvation  (supplementary Fig S8A online). This Atg32–CK2 interaction  was not affected by Atg32-2SA mutation (supplementary  Fig S8B online)."|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	-	2013/12/02	2014/10/16	rogid:etfQ7p1F805HcUhV/Uiv9TPtejU559292	rogid:G9JgaFYrrwsKy0QZ9O1/L2CHXH8559292	intact-crc:2B9D1686EC97505D|rigid:z9xP3YaZiKH2m7X+SwNhWdh0oTU	false	ha tag:?-?	protein a tag:?-?	-	-	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:P15790	uniprotkb:P40458	intact:EBI-9533|ensemblfungi:YIL035C|uniprotkb:D6VVP7	intact:EBI-25256|uniprotkb:D6VVE1|ensemblfungi:YIL146C	psi-mi:csk21_yeast(display_long)|uniprotkb:YIL035C(locus name)|uniprotkb:CKA1(gene name)|psi-mi:CKA1(display_short)	psi-mi:atg32_yeast(display_long)|uniprotkb:YIL146C(locus name)|uniprotkb:ATG32(gene name)|psi-mi:ATG32(display_short)|uniprotkb:Extracellular mutant protein 37(gene name synonym)|uniprotkb:ECM17(gene name synonym)	psi-mi:"MI:0424"(protein kinase assay)	Kanki et al. (2013)	imex:IM-21768|pubmed:23897086	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae)	psi-mi:"MI:0217"(phosphorylation reaction)	psi-mi:"MI:0471"(MINT)	intact:EBI-9004858|imex:IM-21768-4	-	-	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0502"(enzyme target)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_012229.1|sgd:S000001297|ensemblfungi:YIL035C(gene)|ensemblfungi:YIL035C_mRNA(transcript)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005956"(protein kinase CK2 complex)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006359"(regulation of transcription by RNA polymerase III)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0007535"(donor selection)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0034456"(UTP-C complex)|go:"GO:0051726"(regulation of cell cycle)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:4FI1|rcsb pdb:4JQE|rcsb pdb:4JR7|rcsb pdb:4LFI|rcsb pdb:4MWH|reactome:R-SCE-2514853|reactome:R-SCE-6804756|reactome:R-SCE-8934903|reactome:R-SCE-8948751|mint:P15790|dip:DIP-48N	sgd:S000001408|refseq:NP_012120.1|mint:P40458|ensemblfungi:YIL146C(gene)|ensemblfungi:YIL146C_mRNA(transcript)|go:"GO:0000422"(autophagy of mitochondrion)|go:"GO:0005739"(mitochondrion)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0031307"(integral component of mitochondrial outer membrane)|go:"GO:0031930"(mitochondria-nucleus signaling pathway)|go:"GO:0034045"(phagophore assembly site membrane)|rcsb pdb:3VXW|rcsb pdb:5WLP	-	crc64:6A1A7F1BF47250C9	-	figure legend:sf7c|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2013/12/02	2014/10/16	rogid:SNrrYvyWdzd6bAyvluPlZqs5WJw559292	rogid:G9JgaFYrrwsKy0QZ9O1/L2CHXH8559292	intact-crc:591CFC4E46C904CD|rigid:jINYNe8B2i9705B78IIYnpGL56k	false	-	glutathione s tranferase tag:?-?|binding-associated region:1-250	-	-	psi-mi:"MI:0833"(autoradiography)	psi-mi:"MI:0833"(autoradiography)