#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P22204 uniprotkb:P38074 intact:EBI-5569|uniprotkb:D6VUM4|ensemblfungi:YGR092W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:dbf2_yeast(display_long)|uniprotkb:DBF2(gene name)|psi-mi:DBF2(display_short)|uniprotkb:Dumbbell forming protein 2(gene name synonym)|uniprotkb:YGR092W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764971|imex:IM-21416-42 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003324|refseq:NP_011606.3|dip:DIP-2319N|reactome:R-SCE-2028269|ensemblfungi:YGR092W(gene)|ensemblfungi:YGR092W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003723"(RNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007049"(cell cycle)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034973"(Sid2-Mob1 complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901900"(regulation of protein localization to cell division site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|rcsb pdb:5NCN refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:648C565D5CE7117D crc64:383AF61033FB4AC2 antagonist:Rapamycin|figure legend:Fig. 6D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:+HNtG1zL+t9L3ITf/MH16z6H5uY559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:4C1400105ADA2E00|rigid:xD3CqyRf1ndsyhCFk9GX7VQ3U7Q false renilla luciferase protein tag:?-? renilla luciferase protein tag:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38074 uniprotkb:P38074 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764612|imex:IM-21416-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:383AF61033FB4AC2 crc64:383AF61033FB4AC2 antagonist:Rapamycin|figure legend:Fig. 4D, 6D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:E9D1810A88898A75|rigid:qcQrfIgTDjRrdKPo0TxcKAAM/l0 false renilla-n:?-? renilla-c:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P23595 uniprotkb:P38074 intact:EBI-12752|uniprotkb:D6VRG5|ensemblfungi:YDL188C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:pp2a2_yeast(display_long)|uniprotkb:PPH22(gene name)|psi-mi:PPH22(display_short)|uniprotkb:SIS4(gene name synonym)|uniprotkb:YDL188C(locus name)|uniprotkb:D1271(orf name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764980|imex:IM-21416-43 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDL188C(gene)|ensemblfungi:YDL188C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006417"(regulation of translation)|go:"GO:0007015"(actin filament organization)|go:"GO:0007117"(budding cell bud growth)|go:"GO:0034399"(nuclear periphery)|go:"GO:0046872"(metal ion binding)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:2000198"(negative regulation of ribonucleoprotein complex localization)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-389513|reactome:R-SCE-6811558|reactome:R-SCE-69273|refseq:NP_010093.1|sgd:S000002347|mint:P23595|dip:DIP-2283N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:549D3C6F1E2EB335 crc64:383AF61033FB4AC2 agonist:Rapamycin|figure legend:Fig. 6D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:sKD3DJdRePGJ97regq2tgyswJ0E559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:2B3A81395FA86425|rigid:SnpgtkCfV5tSLEXdNNM+nGKXftc false renilla luciferase protein tag:?-? renilla luciferase protein tag:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P45206 uniprotkb:P45206 intact:EBI-8764660|ensemblbacteria:AAC23089 intact:EBI-8764660|ensemblbacteria:AAC23089 psi-mi:sspb_haein(display_long)|uniprotkb:sspB(gene name)|psi-mi:sspB(display_short)|uniprotkb:Adapter protein SspB(gene name synonym)|uniprotkb:Specificity-enhancing factor SspB(gene name synonym)|uniprotkb:HI_1440(locus name) psi-mi:sspb_haein(display_long)|uniprotkb:sspB(gene name)|psi-mi:sspB(display_short)|uniprotkb:Adapter protein SspB(gene name synonym)|uniprotkb:Specificity-enhancing factor SspB(gene name synonym)|uniprotkb:HI_1440(locus name) psi-mi:"MI:1037"(Split renilla luciferase complementation) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:71421(haein)|taxid:71421(Haemophilus influenzae) taxid:71421(haein)|taxid:71421(Haemophilus influenzae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764659|imex:IM-21416-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_005650453.1|ensemblbacteria:AAC23089(transcript)|ensemblbacteria:HI_1440(gene)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0045732"(positive regulation of protein catabolic process)|interpro:IPR007481(Stringent starvation protein B)|rcsb pdb:1OU8|rcsb pdb:1OU9|rcsb pdb:1OUL|rcsb pdb:1TWB|rcsb pdb:1ZSZ|refseq:NP_439592.1|interpro:IPR036760 refseq:WP_005650453.1|ensemblbacteria:AAC23089(transcript)|ensemblbacteria:HI_1440(gene)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0045732"(positive regulation of protein catabolic process)|interpro:IPR007481(Stringent starvation protein B)|rcsb pdb:1OU8|rcsb pdb:1OU9|rcsb pdb:1OUL|rcsb pdb:1TWB|rcsb pdb:1ZSZ|refseq:NP_439592.1|interpro:IPR036760 - - - figure legend:Fig. 4D|comment:The construct in this control interaction are described as SspBLSLA-SspBYGMF but no further explanation of this could be found.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:ZvFMrTXkoErNBcl+sX0uA3rjPSw71421 rogid:ZvFMrTXkoErNBcl+sX0uA3rjPSw71421 intact-crc:FD08302C7AD9DD82|rigid:qdI/OIMQ6ya5eAe0yF2b7UVk2Ac false renilla-n:?-? renilla-c:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P38074 uniprotkb:P43562 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-22828|uniprotkb:D6VTJ0|ensemblfungi:YFL040W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:yfe0_yeast(display_long)|uniprotkb:YFL040W(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764893|imex:IM-21416-36 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_116613.1|sgd:S000001854|dip:DIP-4427N|mint:P43562|ensemblfungi:YFL040W(gene)|ensemblfungi:YFL040W_mRNA(transcript)|go:"GO:0000324"(fungal-type vacuole)|go:"GO:0005366"("myo-inositol:proton symporter activity")|go:"GO:0005628"(prospore membrane)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022857"(transmembrane transporter activity)|go:"GO:0055085"(transmembrane transport)|interpro:IPR005828(General substrate transporter)|interpro:IPR005829(Sugar transporter, conserved site)|interpro:IPR020846|interpro:IPR036259 - crc64:383AF61033FB4AC2 - figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:JzbyxaDC75fewfwaoVCrVtHvmgU559292 intact-crc:BDCD1C664AFBE173|rigid:/6MjSC0W24XCNT2HNgTnEJ4XCxI false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P10664 uniprotkb:P38074 intact:EBI-15390|uniprotkb:D6VQ32|ensemblfungi:YBR031W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:rl4a_yeast(display_long)|uniprotkb:RPL4A(gene name)|psi-mi:RPL4A(display_short)|uniprotkb:RPL2(gene name synonym)|uniprotkb:RPL2A(gene name synonym)|uniprotkb:YBR031W(locus name)|uniprotkb:YBR0315(orf name)|uniprotkb:L2(gene name synonym)|uniprotkb:YL2(gene name synonym)|uniprotkb:RP2(gene name synonym)|uniprotkb:Large ribosomal subunit protein uL4-A(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764783|imex:IM-21416-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009587.1|sgd:S000000235|rcsb pdb:6EM5|rcsb pdb:6FT6|rcsb pdb:6GQ1|rcsb pdb:6GQB|rcsb pdb:6GQV|rcsb pdb:6HD7|rcsb pdb:6HHQ|rcsb pdb:6I7O|rcsb pdb:6M62|rcsb pdb:6N8J|rcsb pdb:6N8K|rcsb pdb:6N8L|rcsb pdb:6N8M|rcsb pdb:6N8N|rcsb pdb:6N8O|rcsb pdb:6OIG|rcsb pdb:6Q8Y|rcsb pdb:6QIK|rcsb pdb:6QT0|rcsb pdb:6QTZ|rcsb pdb:6R84|rcsb pdb:6R86|rcsb pdb:6R87|rcsb pdb:6RI5|rcsb pdb:6RZZ|rcsb pdb:6S05|rcsb pdb:6S47|rcsb pdb:6SNT|rcsb pdb:6EM4|rcsb pdb:6SV4|rcsb pdb:6T4Q|rcsb pdb:6T7I|rcsb pdb:6T7T|rcsb pdb:6T83|rcsb pdb:6TB3|rcsb pdb:6TNU|rcsb pdb:6WOO|rcsb pdb:6YLG|rcsb pdb:6YLH|rcsb pdb:6YLX|rcsb pdb:6YLY|rcsb pdb:6Z6J|rcsb pdb:6Z6K|rcsb pdb:7AZY|rcsb pdb:7B7D|rcsb pdb:7BT6|rcsb pdb:7BTB|rcsb pdb:7NRC|rcsb pdb:7NRD|reactome:R-SCE-156827|reactome:R-SCE-1799339|reactome:R-SCE-72689|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0022625"(cytosolic large ribosomal subunit)|interpro:IPR002136(Ribosomal protein L4/L1e)|interpro:IPR013000(Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved site)|interpro:IPR023574|interpro:IPR025755|rcsb pdb:1K5Y|rcsb pdb:3J6X|rcsb pdb:3J6Y|rcsb pdb:3J77|rcsb pdb:3J78|rcsb pdb:3JCT|rcsb pdb:4U3M|rcsb pdb:4U3N|rcsb pdb:4U3U|rcsb pdb:4U4N|rcsb pdb:4U4O|rcsb pdb:4U4Q|rcsb pdb:4U4R|rcsb pdb:4U4U|rcsb pdb:4U4Y|rcsb pdb:4U4Z|rcsb pdb:4U50|rcsb pdb:4U51|rcsb pdb:4U52|rcsb pdb:4U53|rcsb pdb:4U55|rcsb pdb:4U56|rcsb pdb:4U6F|rcsb pdb:4V6I|rcsb pdb:4V7F|rcsb pdb:4V7R|rcsb pdb:4V88|rcsb pdb:4V8T|rcsb pdb:4V8Y|ensemblfungi:YBR031W(gene)|rcsb pdb:4V8Z|rcsb pdb:4V91|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5DAT|rcsb pdb:5DC3|rcsb pdb:5DGE|rcsb pdb:5DGF|rcsb pdb:5DGV|rcsb pdb:5FCI|rcsb pdb:5FCJ|rcsb pdb:5FL8|rcsb pdb:5GAK|rcsb pdb:5H4P|rcsb pdb:5I4L|rcsb pdb:5JCS|rcsb pdb:5JUO|rcsb pdb:5JUP|rcsb pdb:5JUS|rcsb pdb:5JUT|rcsb pdb:5JUU|rcsb pdb:5LYB|rcsb pdb:5M1J|rcsb pdb:5MC6|rcsb pdb:5MEI|rcsb pdb:5NDG|ensemblfungi:YBR031W_mRNA(transcript)|go:"GO:0002181"(cytoplasmic translation)|rcsb pdb:5NDV|rcsb pdb:5NDW|rcsb pdb:5OBM|rcsb pdb:5ON6|rcsb pdb:5T62|rcsb pdb:5T6R|rcsb pdb:5TBW|rcsb pdb:5TGA|rcsb pdb:5TGM|rcsb pdb:5Z3G|rcsb pdb:6C0F|rcsb pdb:6CB1|rcsb pdb:6ELZ|rcsb pdb:6EM1|rcsb pdb:6EM3|dip:DIP-8314N|mint:P10664 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:37D0942A10AAE89F crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:XvXRGElHYKmzuBussPOaCELEIZM559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:EB6B1FB2F9BAD160|rigid:mEqjHTPYfILavCNzJxQ0IrlorvE false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P39009 uniprotkb:P38074 intact:EBI-6194|uniprotkb:D6VRP9|ensemblfungi:YDL101C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:dun1_yeast(display_long)|uniprotkb:DUN1(gene name)|psi-mi:DUN1(display_short)|uniprotkb:D2370(orf name)|uniprotkb:YDL101C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764901|imex:IM-21416-38 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010182.1|sgd:S000002259|dip:DIP-1772N|reactome:R-SCE-5693565|reactome:R-SCE-69473|reactome:R-SCE-69601|reactome:R-SCE-75035|ensemblfungi:YDL101C(gene)|ensemblfungi:YDL101C_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0042770"(signal transduction in response to DNA damage)|go:"GO:0044773"(mitotic DNA damage checkpoint signaling)|go:"GO:0048478"(replication fork protection)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000253(Forkhead-associated)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR008984(SMAD/FHA domain)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:2JQJ|rcsb pdb:2JQL refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:4990F24F024702D7 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:/BmlSDRdkj7efDRuXH/qWpdTv/U559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:05A1452FFC716383|rigid:/CO/qLFcKsyl7R5iz91ZvwDz3LY false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:Q99383 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-11783|uniprotkb:Q02741|ensemblfungi:YOL123W|uniprotkb:D6W1U5 psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:hrp1_yeast(display_long)|uniprotkb:YOL123W(locus name)|uniprotkb:HRP1(gene name)|psi-mi:HRP1(display_short)|uniprotkb:NAB4(gene name synonym)|uniprotkb:NAB5(gene name synonym)|uniprotkb:Cleavage factor IB(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764865|imex:IM-21416-29 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 ensemblfungi:YOL123W(gene)|ensemblfungi:YOL123W_mRNA(transcript)|go:"GO:0000184"(nuclear-transcribed mRNA catabolic process, nonsense-mediated decay)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0072423"(response to DNA damage checkpoint signaling)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034155|interpro:IPR034156|interpro:IPR035979|rcsb pdb:2CJK|rcsb pdb:2KM8|go:"GO:0005737"(cytoplasm)|refseq:NP_014518.1|sgd:S000005483|dip:DIP-1371N - crc64:383AF61033FB4AC2 crc64:1B231069437B093D figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:8EWzxKR7UWoJhDGSB/0C2d0Qn6k559292 intact-crc:41768442FC793576|rigid:wCy3FIE0wWmyRuU8RJ55MDeGwU8 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:Q03862 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-31385|uniprotkb:D6VS88|ensemblfungi:YDR101C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:arx1_yeast(display_long)|uniprotkb:Associated with ribosomal export complex protein 1(gene name synonym)|uniprotkb:ARX1(gene name)|psi-mi:ARX1(display_short)|uniprotkb:YD8557.10c(orf name)|uniprotkb:YDR101C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764857|imex:IM-21416-27 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_010386.1|sgd:S000002508|dip:DIP-5819N|mint:Q03862|ensemblfungi:YDR101C(gene)|ensemblfungi:YDR101C_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0030687"(preribosome, large subunit precursor)|go:"GO:0046872"(metal ion binding)|interpro:IPR000994(Peptidase M24, catalytic core)|interpro:IPR036005|interpro:IPR036388|rcsb pdb:3JCT|rcsb pdb:4V7F|rcsb pdb:4V8T|rcsb pdb:5APN|rcsb pdb:5APO|rcsb pdb:5JCS|rcsb pdb:6FT6|rcsb pdb:6M62|rcsb pdb:6RZZ|rcsb pdb:6YLG|rcsb pdb:6YLH|reactome:R-SCE-6798695 - crc64:383AF61033FB4AC2 crc64:E68A7896FAFA6A0C figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:td4xQ4tAQGk4eK1saQr7x3whlqs559292 intact-crc:E2FC307489398A30|rigid:LVkFuVOBpGkOSw9jfRSnLOB9bak false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P22204 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-5569|uniprotkb:D6VUM4|ensemblfungi:YGR092W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:dbf2_yeast(display_long)|uniprotkb:DBF2(gene name)|psi-mi:DBF2(display_short)|uniprotkb:Dumbbell forming protein 2(gene name synonym)|uniprotkb:YGR092W(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764861|imex:IM-21416-28 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 sgd:S000003324|refseq:NP_011606.3|dip:DIP-2319N|reactome:R-SCE-2028269|ensemblfungi:YGR092W(gene)|ensemblfungi:YGR092W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003723"(RNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007049"(cell cycle)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034973"(Sid2-Mob1 complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901900"(regulation of protein localization to cell division site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|rcsb pdb:5NCN - crc64:383AF61033FB4AC2 crc64:648C565D5CE7117D figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:+HNtG1zL+t9L3ITf/MH16z6H5uY559292 intact-crc:C8FEA444FAA72FD7|rigid:xD3CqyRf1ndsyhCFk9GX7VQ3U7Q false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P41814 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-8995|ensemblfungi:YNL062C|uniprotkb:D6W1B8 psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:trm6_yeast(display_long)|uniprotkb:GCD10(gene name)|psi-mi:GCD10(display_short)|uniprotkb:TIF33(gene name synonym)|uniprotkb:YNL062C(locus name)|uniprotkb:N2422(orf name)|uniprotkb:TRM6(gene name synonym)|uniprotkb:"tRNA(m1A58)-methyltransferase subunit TRM6"(gene name synonym)|uniprotkb:General control non-derepressible protein 10(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764821|imex:IM-21416-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 ensemblfungi:YNL062C(gene)|ensemblfungi:YNL062C_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0030488"(tRNA methylation)|go:"GO:0031515"("tRNA (m1A) methyltransferase complex")|interpro:IPR017423("tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit")|rcsb pdb:5EQJ|rcsb pdb:5ERG|refseq:NP_014337.3|sgd:S000005006|mint:P41814|dip:DIP-3842N - crc64:383AF61033FB4AC2 - figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:fRERtM1kqCGuBJfI4OBtaf8t4W8559292 intact-crc:913081633127E982|rigid:OHSsFcYRZj8xIE7ZjtzhdjPvwec false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P41810 uniprotkb:P38074 intact:EBI-4869|uniprotkb:Q03779|uniprotkb:D6VSL9|ensemblfungi:YDR238C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:copb_yeast(display_long)|uniprotkb:SEC26(gene name)|psi-mi:SEC26(display_short)|uniprotkb:YDR238C(locus name)|uniprotkb:YD8419.05C(orf name)|uniprotkb:Beta-coat protein(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764928|imex:IM-21416-41 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002646|refseq:NP_010524.3|dip:DIP-6467N|mint:P41810|ensemblfungi:YDR238C(gene)|ensemblfungi:YDR238C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005198"(structural molecule activity)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0008298"(intracellular mRNA localization)|go:"GO:0030126"(COPI vesicle coat)|interpro:IPR000225(Armadillo)|interpro:IPR002553(Clathrin/coatomer adaptor, adaptin-like, N-terminal)|interpro:IPR011710(Coatomer, beta subunit, C-terminal)|interpro:IPR011989(Armadillo-like helical)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR016460(Coatomer, beta subunit)|interpro:IPR029446|reactome:R-SCE-6798695|reactome:R-SCE-6807878|reactome:R-SCE-6811434 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:885420DB026BCFA3 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:ZfLp1BUmvVuTiXn7/Zbf/3m6VtE559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:21722FE37249036B|rigid:F/TWRqO1V4KczTmpFgVVh+goEUk false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P52488 uniprotkb:P38074 intact:EBI-19710|uniprotkb:D6VT24|ensemblfungi:YDR390C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:uba2_yeast(display_long)|uniprotkb:UBA2(gene name)|psi-mi:UBA2(display_short)|uniprotkb:PIP2(gene name synonym)|uniprotkb:UAL1(gene name synonym)|uniprotkb:YDR390C(locus name)|uniprotkb:D9509.10(orf name)|uniprotkb:SMT3-activating enzyme subunit 2(gene name synonym)|uniprotkb:Polymerase-interacting protein 2(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764853|imex:IM-21416-26 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002798|reactome:R-SCE-3065676|reactome:R-SCE-3065678|rcsb pdb:3ONH|ensemblfungi:YDR390C(gene)|ensemblfungi:YDR390C_mRNA(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0016925"(protein sumoylation)|go:"GO:0019948"(SUMO activating enzyme activity)|go:"GO:0031510"(SUMO activating enzyme complex)|go:"GO:0032446"(protein modification by small protein conjugation)|interpro:IPR000594(UBA/THIF-type NAD/FAD binding fold)|interpro:IPR019572|interpro:IPR023318|interpro:IPR030661|interpro:IPR033127|interpro:IPR035985|go:"GO:0046872"(metal ion binding)|interpro:IPR042449|rcsb pdb:3ONG|refseq:NP_010678.3|dip:DIP-2296N|mint:P52488 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:DBF800E1458B3B10 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:4V7MfideC5D7urtzuneIVjEgTkU559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:C9B9E029366E5EF5|rigid:tUMM/9AEJ6zboqkwtQV50uSJWlg false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38754 uniprotkb:P38074 intact:EBI-14475|uniprotkb:D3DKR3|ensemblfungi:YHL001W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:rl14b_yeast(display_long)|uniprotkb:RPL14B(gene name)|psi-mi:RPL14B(display_short)|uniprotkb:Large ribosomal subunit protein eL14-B(gene name synonym)|uniprotkb:YHL001W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764800|imex:IM-21416-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0002181"(cytoplasmic translation)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0042273"(ribosomal large subunit biogenesis)|interpro:IPR002784(Ribosomal protein L14)|interpro:IPR008991(Translation protein SH3-like)|interpro:IPR014722(Translation protein SH3-like, subgroup)|interpro:IPR039660|interpro:IPR041985|ensemblfungi:YHL001W_mRNA(transcript)|rcsb pdb:4V8Y|rcsb pdb:4V8Z|rcsb pdb:4V91|ensemblfungi:YHL001W(gene)|refseq:NP_011862.1|sgd:S000000993|reactome:R-SCE-156827|reactome:R-SCE-72706|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-72689|dip:DIP-5568N|reactome:R-SCE-1799339 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - - crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:XOVpz17FtytoNK7TX7nD/W8IhZQ559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:C1BF34D94B818141|rigid:PvqtseWv+aOlnkzlBf0MtbRKnh8 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q05636 uniprotkb:P38074 intact:EBI-1810|uniprotkb:D6VSR0|ensemblfungi:YDR280W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:rrp45_yeast(display_long)|uniprotkb:RRP45(gene name)|psi-mi:RRP45(display_short)|uniprotkb:YDR280W(locus name)|uniprotkb:D9954.1(orf name)|uniprotkb:Ribosomal RNA-processing protein 45(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764877|imex:IM-21416-32 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010566.1|sgd:S000002688|dip:DIP-2084N|mint:Q05636|ensemblfungi:YDR280W(gene)|ensemblfungi:YDR280W_mRNA(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0070478"(nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay)|go:"GO:0070481"(nuclear-transcribed mRNA catabolic process, non-stop decay)|go:"GO:0070651"(nonfunctional rRNA decay)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR027408|interpro:IPR033100|interpro:IPR036345|rcsb pdb:2WP8|rcsb pdb:4IFD|rcsb pdb:4OO1|rcsb pdb:5C0W|rcsb pdb:5C0X|rcsb pdb:5G06|rcsb pdb:5JEA|rcsb pdb:5K36|rcsb pdb:5OKZ|rcsb pdb:5VZJ|rcsb pdb:6FSZ|rcsb pdb:6LQS|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-429958|reactome:R-SCE-450385|reactome:R-SCE-450513|reactome:R-SCE-6791226 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:65C9DB5A63678F2D crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:LCdt9Nm8j2AD6iecBI2CGCrhEhQ559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:E6E055D72D3DF1EF|rigid:c0oNeUd5n9cOGBSU7LTrgmL0n2g false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P32505 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-11770|ensemblfungi:YGL122C|uniprotkb:D6VU26 psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:nab2_yeast(display_long)|uniprotkb:YGL122C(locus name)|uniprotkb:NAB2(gene name)|psi-mi:NAB2(display_short) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764788|imex:IM-21416-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 ensemblfungi:YGL122C(gene)|ensemblfungi:YGL122C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008312"(7S RNA binding)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0033204"(ribonuclease P RNA binding)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0046872"(metal ion binding)|go:"GO:1900152"(negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1900364"(negative regulation of mRNA polyadenylation)|interpro:IPR021083|interpro:IPR040366|go:"GO:0045945"(positive regulation of transcription by RNA polymerase III)|interpro:IPR041044|interpro:IPR043094|rcsb pdb:2JPS|rcsb pdb:2LHN|rcsb pdb:2V75|rcsb pdb:3LCN|rcsb pdb:3ZJ1|rcsb pdb:3ZJ2|rcsb pdb:4JLQ|rcsb pdb:5L2L|refseq:NP_011393.3|sgd:S000003090|mint:P32505|dip:DIP-1331N - crc64:383AF61033FB4AC2 crc64:40335C3D4658DD91 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:tNdhCVVTRYjqg7BES5wD2Gg4rjw559292 intact-crc:75CA36BDDC603331|rigid:Hq4w//q7+WvZ7mmyt9w+KQh9x34 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q06218 uniprotkb:P38074 intact:EBI-5640|uniprotkb:Q66R46|uniprotkb:D6VYS3|ensemblfungi:YLR276C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:dbp9_yeast(display_long)|uniprotkb:DBP9(gene name)|psi-mi:DBP9(display_short)|uniprotkb:YLR276C(locus name)|uniprotkb:L9328.3(orf name)|uniprotkb:DEAD box protein 9(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764738|imex:IM-21416-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013378.1|sgd:S000004266|dip:DIP-4771N|mint:Q06218|ensemblfungi:YLR276C(gene)|ensemblfungi:YLR276C_mRNA(transcript)|go:"GO:0000463"("maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005730"(nucleolus)|go:"GO:0033677"(DNA/RNA helicase activity)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|interpro:IPR027417 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:CCE8E0AF8B4071D7 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:mXFpsAGvrwYcOUKDO7gMlovOJuU559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:9CD57CE21664AF8B|rigid:ZMfg2n1j8KbnDGX4n2XR4kuJjuI false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P53331 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-23641|uniprotkb:D6VV53|ensemblfungi:YGR276C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:rexo1_yeast(display_long)|uniprotkb:YGR276C(locus name)|uniprotkb:G9381(orf name)|uniprotkb:RNH70(gene name)|psi-mi:RNH70(display_short)|uniprotkb:REX1(gene name synonym)|uniprotkb:"RNase H(70)"(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764770|imex:IM-21416-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_011792.1|sgd:S000003508|dip:DIP-5564N|ensemblfungi:YGR276C(gene)|ensemblfungi:YGR276C_mRNA(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0002107"(generation of mature 3'-end of 5S rRNA generated by RNA polymerase III)|go:"GO:0003723"(RNA binding)|go:"GO:0004527"(exonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0008408"(3'-5' exonuclease activity)|go:"GO:0034415"(tRNA 3'-trailer cleavage, exonucleolytic)|go:"GO:0034476"(U5 snRNA 3'-end processing)|interpro:IPR012337(Polynucleotidyl transferase, Ribonuclease H fold)|interpro:IPR013520(Exonuclease, RNase T and DNA polymerase III)|interpro:IPR034922|interpro:IPR036397 - crc64:383AF61033FB4AC2 - figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:mkFn9c/1OdcUX9TOL2m2kGd0K90559292 intact-crc:D925D9FB02145294|rigid:ETdMOOTuEAgW37skV6UrjgySYmc false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P14682 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-19730|uniprotkb:D6VS40|ensemblfungi:YDR054C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:ubc3_yeast(display_long)|uniprotkb:CDC34(gene name)|psi-mi:CDC34(display_short)|uniprotkb:UBC3(gene name synonym)|uniprotkb:DNA6(gene name synonym)|uniprotkb:YDR054C(locus name)|uniprotkb:YD9609.08C(orf name)|uniprotkb:D4211(orf name)|uniprotkb:Ubiquitin-protein ligase(gene name synonym)|uniprotkb:Ubiquitin carrier protein(gene name synonym)|uniprotkb:Cell division control protein 34(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC34(gene name synonym)|uniprotkb:E2 ubiquitin-conjugating enzyme 3(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764813|imex:IM-21416-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_010339.1|sgd:S000002461|ensemblfungi:YDR054C(gene)|ensemblfungi:YDR054C_mRNA(transcript)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006260"(DNA replication)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0051301"(cell division)|go:"GO:0051865"(protein autoubiquitination)|go:"GO:0061631"(ubiquitin conjugating enzyme activity)|interpro:IPR000608(Ubiquitin-conjugating enzyme, E2)|interpro:IPR016135(Ubiquitin-conjugating enzyme/RWD-like)|interpro:IPR023313|rcsb pdb:6NYA|rcsb pdb:6NYD|rcsb pdb:7K5J|reactome:R-SCE-8866652|reactome:R-SCE-983168|dip:DIP-1618N|mint:P14682 - crc64:383AF61033FB4AC2 crc64:1CE3E0C3AB1436DC figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:1GaQJnMKE90j9Egn6PJsANrxSzg559292 intact-crc:A8E4F9B653136658|rigid:RMiEUuWfF3IYUdra9Ja1+Qxawy0 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P07264 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-10122|uniprotkb:D6VUC8|ensemblfungi:YGL009C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:leuc_yeast(display_long)|uniprotkb:YGL009C(locus name)|uniprotkb:LEU1(gene name)|psi-mi:LEU1(display_short)|uniprotkb:Isopropylmalate isomerase(gene name synonym)|uniprotkb:Alpha-IPM isomerase(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764804|imex:IM-21416-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_011506.1|sgd:S000002977|ensemblfungi:YGL009C(gene)|ensemblfungi:YGL009C_mRNA(transcript)|go:"GO:0003861"(3-isopropylmalate dehydratase activity)|go:"GO:0005829"(cytosol)|go:"GO:0009082"(branched-chain amino acid biosynthetic process)|go:"GO:0009098"(leucine biosynthetic process)|go:"GO:0009316"(3-isopropylmalate dehydratase complex)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR000573(Aconitase A/isopropylmalate dehydratase small subunit, swivel)|interpro:IPR001030(Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha)|interpro:IPR004430(3-isopropylmalate dehydratase, large subunit region)|interpro:IPR004431(3-isopropylmalate dehydratase, small subunit region)|interpro:IPR012235(3-isopropylmalate dehydratase, fused small/large subunits)|interpro:IPR015928(Aconitase/3-isopropylmalate dehydratase, swivel)|interpro:IPR015931(Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomains 1 and 3)|interpro:IPR018136|interpro:IPR033940|interpro:IPR033941|interpro:IPR036008|dip:DIP-6715N|mint:P07264 - crc64:383AF61033FB4AC2 - figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:tDTa7a7e5DR1lJm9RyRDzA1NYbk559292 intact-crc:EAB62B57AFF1A060|rigid:Q3UPjTqySbQWwxeVeYfO0yzbSH0 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P32529 uniprotkb:P38074 intact:EBI-15756|uniprotkb:D6VWN4|ensemblfungi:YJR063W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:rpa12_yeast(display_long)|uniprotkb:RPA12(gene name)|psi-mi:RPA12(display_short)|uniprotkb:RRN4(gene name synonym)|uniprotkb:YJR063W(locus name)|uniprotkb:J1747(orf name)|uniprotkb:DNA-directed RNA polymerase I 13.7 kDa polypeptide(gene name synonym)|uniprotkb:A12(gene name synonym)|uniprotkb:A12.2(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764881|imex:IM-21416-33 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012597.1|sgd:S000003824|dip:DIP-236N|mint:P32529|ensemblfungi:YJR063W(gene)|ensemblfungi:YJR063W_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0001054"(RNA polymerase I activity)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0005736"(RNA polymerase I complex)|go:"GO:0006360"(transcription by RNA polymerase I)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006379"(mRNA cleavage)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR001222(Zinc finger, TFIIS-type)|interpro:IPR001529(DNA-directed RNA polymerase, M/15 kDa subunit)|interpro:IPR012164(DNA-directed RNA polymerase, subunit C11/M/9)|interpro:IPR019761|interpro:IPR034004|rcsb pdb:4C2M|rcsb pdb:4C3H|rcsb pdb:4C3I|rcsb pdb:4C3J|rcsb pdb:4YM7|rcsb pdb:5G5L|rcsb pdb:5LMX|rcsb pdb:5M3F|rcsb pdb:5M3M|rcsb pdb:5M5W|rcsb pdb:5M5X|rcsb pdb:5M5Y|rcsb pdb:5M64|rcsb pdb:5N5Y|rcsb pdb:5N5Z|rcsb pdb:5N60|rcsb pdb:5N61|rcsb pdb:5OA1|rcsb pdb:5W5Y|rcsb pdb:5W64|rcsb pdb:5W65|rcsb pdb:5W66|rcsb pdb:6H67|rcsb pdb:6H68|rcsb pdb:6HKO|rcsb pdb:6HLQ|rcsb pdb:6HLR|rcsb pdb:6HLS|rcsb pdb:6RQH|rcsb pdb:6RQL|rcsb pdb:6RQT|rcsb pdb:6RRD|rcsb pdb:6RUI|rcsb pdb:6RUO|rcsb pdb:6RWE|rcsb pdb:6TPS|reactome:R-SCE-73762|reactome:R-SCE-73772 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:D79372070819987C crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:B0Zmf643W8DtAQteaDk8PVvdqW4559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:F9BBF484B1D6EB9C|rigid:AvQVTkuBy9449zZKKxztLvmECwU false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q08831 uniprotkb:P38074 intact:EBI-36342|uniprotkb:D6W354|ensemblfungi:YOR359W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:vts1_yeast(display_long)|uniprotkb:VTI1-2 suppressor protein 1(gene name synonym)|uniprotkb:VTS1(gene name)|psi-mi:VTS1(display_short)|uniprotkb:YOR359W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764922|imex:IM-21416-40 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005886|refseq:NP_015004.3|mint:Q08831|dip:DIP-1279N|ensemblfungi:YOR359W(gene)|ensemblfungi:YOR359W_mRNA(transcript)|go:"GO:0000166"(nucleotide binding)|go:"GO:0000289"("nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0015031"(protein transport)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0030371"(translation repressor activity)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0070336"(flap-structured DNA binding)|interpro:IPR001660(Sterile alpha motif SAM)|interpro:IPR013761(Sterile alpha motif-type)|interpro:IPR037635|rcsb pdb:2B6G|rcsb pdb:2D3D|rcsb pdb:2ES6|rcsb pdb:2ESE|rcsb pdb:2F8K|rcsb pdb:2FE9 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - - crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:BSecKQeukK61EYgAFvkqjSFIiLk559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:A3486F712CA71019|rigid:umk/CZfyercLwy1R+m+Scm3EzEo false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P00937 uniprotkb:P38074 intact:EBI-19585|uniprotkb:D6VWZ2|ensemblfungi:YKL211C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:trpg_yeast(display_long)|uniprotkb:TRP3(gene name)|psi-mi:TRP3(display_short)|uniprotkb:YKL211C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764889|imex:IM-21416-35 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012711.1|sgd:S000001694|ensemblfungi:YKL211C(gene)|ensemblfungi:YKL211C_mRNA(transcript)|go:"GO:0000162"(tryptophan biosynthetic process)|go:"GO:0004049"(anthranilate synthase activity)|go:"GO:0004425"(indole-3-glycerol-phosphate synthase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005950"(anthranilate synthase complex)|go:"GO:0006541"(glutamine metabolic process)|interpro:IPR001468(Indole-3-glycerol phosphate synthase, central region)|interpro:IPR006221(Glutamine amidotransferase of anthranilate synthase)|interpro:IPR011060(Ribulose-phosphate binding barrel)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR013798(Indole-3-glycerol phosphate synthase)|interpro:IPR017926|interpro:IPR029062|dip:DIP-543N|mint:P00937 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:34EF65E829279C1F crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:dTf0v6Lw8wfW8VS9Fquv8wQ/fmE559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:266957AB8C107BFC|rigid:GW3vh6a2UkCCCQq5tzHR9lhvxf4 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P46679 uniprotkb:P38074 intact:EBI-18321|uniprotkb:D6VZM8|ensemblfungi:YMR053C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:stb2_yeast(display_long)|uniprotkb:STB2(gene name)|psi-mi:STB2(display_short)|uniprotkb:YM9796.06C(orf name)|uniprotkb:YMR053C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764897|imex:IM-21416-37 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013769.1|sgd:S000004657|ensemblfungi:YMR053C(gene)|ensemblfungi:YMR053C_mRNA(transcript)|go:"GO:0070822"(Sin3-type complex)|interpro:IPR038919|dip:DIP-1725N|mint:P46679 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - - crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:Zsw+Ylqym5/M9aSmvgjMQWi+Q4o559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:19F2383CF3BF31EB|rigid:n38/zRu7c0++YyibuOPslJyeRRY false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P32849 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-14773|ensemblfungi:YLR032W|uniprotkb:D6VY34 psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:rad5_yeast(display_long)|uniprotkb:REV2(gene name synonym)|uniprotkb:YLR032W(locus name)|uniprotkb:RAD5(gene name)|psi-mi:RAD5(display_short)|uniprotkb:SNM2(gene name synonym)|uniprotkb:Radiation sensitivity protein 5(gene name synonym)|uniprotkb:Revertibility protein 2(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764885|imex:IM-21416-34 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_013132.1|sgd:S000004022|ensemblfungi:YLR032W(gene)|ensemblfungi:YLR032W_mRNA(transcript)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000403"(Y-form DNA binding)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0000785"(chromatin)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006301"(postreplication repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0008270"(zinc ion binding)|go:"GO:0010994"(free ubiquitin chain polymerization)|go:"GO:0016818"(hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides)|go:"GO:0042275"(error-free postreplication DNA repair)|go:"GO:0042276"(error-prone translesion synthesis)|go:"GO:0070615"|go:"GO:0070987"(error-free translesion synthesis)|interpro:IPR000330(SNF2-related)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014905(HIRAN)|interpro:IPR017907|interpro:IPR027417|interpro:IPR038718|rcsb pdb:5YRQ|reactome:R-SCE-8866654|go:"GO:0009378"(four-way junction helicase activity)|dip:DIP-5830N|mint:P32849 - crc64:383AF61033FB4AC2 crc64:226B720097433EE2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:gKjd6r+cPzkuJUjpYjt5Szl+OLI559292 intact-crc:79E15E2C8CD6EB9D|rigid:zaLxRqf0Nnm/368rBP5b/tTVH44 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P38851 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-3774829|uniprotkb:D3DLA4|ensemblfungi:YHR155W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:lam1_yeast(display_long)|uniprotkb:LAM1(gene name)|psi-mi:LAM1(display_short)|uniprotkb:Lipid transfer protein anchored at membrane contact sites 1(gene name synonym)|uniprotkb:YSP1(gene name synonym)|uniprotkb:Yeast suicide protein 1(gene name synonym)|uniprotkb:YHR155W(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764873|imex:IM-21416-31 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 mint:P38851|interpro:IPR039463|interpro:IPR027267|refseq:NP_012025.1|sgd:S000001198|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR001849(Pleckstrin-like)|interpro:IPR031968|ensemblfungi:YHR155W(gene)|ensemblfungi:YHR155W_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0015248"(sterol transporter activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016538"(cyclin-dependent protein serine/threonine kinase regulator activity)|go:"GO:0031966"(mitochondrial membrane)|go:"GO:0032366"(intracellular sterol transport)|go:"GO:0032541"(cortical endoplasmic reticulum)|go:"GO:0045737"(positive regulation of cyclin-dependent protein serine/threonine kinase activity)|interpro:IPR042067 - crc64:383AF61033FB4AC2 - figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:a0Xd+W2bywZ6iqf7du48fWQWzJM559292 intact-crc:A872510F175425CD|rigid:AtUpGAH9REIIJGTGCcZWPiuNvUM false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53191 uniprotkb:P38074 intact:EBI-13400|uniprotkb:E9P8Z2|uniprotkb:D6VUB4|ensemblfungi:YGL023C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:pib2_yeast(display_long)|uniprotkb:PIB2(gene name)|psi-mi:PIB2(display_short)|uniprotkb:YGL023C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764869|imex:IM-21416-30 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011492.3|sgd:S000002991|ensemblfungi:YGL023C(gene)|ensemblfungi:YGL023C_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005774"(vacuolar membrane)|go:"GO:0046872"(metal ion binding)|interpro:IPR000306(Zinc finger, FYVE-type)|interpro:IPR011011(Zinc finger, FYVE/PHD-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR017455(Zinc finger, FYVE-related)|mint:P53191|dip:DIP-6378N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:512E9B873E6E0164 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:3T1+dWkNV7dfKQf0/9hJkjQbRW4559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:75523DD015F31983|rigid:DiyDdt5oWLmFcCFXAjsO3bNvapo false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P53630 uniprotkb:P38074 intact:EBI-3642|uniprotkb:D6W1N2|ensemblfungi:YNR057C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:biod_yeast(display_long)|uniprotkb:BIO4(gene name)|psi-mi:BIO4(display_short)|uniprotkb:YNR057C(locus name)|uniprotkb:N3506(orf name)|uniprotkb:Dethiobiotin synthase(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764849|imex:IM-21416-25 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014455.1|sgd:S000005340|interpro:IPR004472(Dethiobiotin synthase)|rcsb pdb:1M3T|interpro:IPR027417|ensemblfungi:YNR057C(gene)|ensemblfungi:YNR057C_mRNA(transcript)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004141"(dethiobiotin synthase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0009102"(biotin biosynthetic process) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - - crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:E5es8u5KYQN7hYZAVR1M9KoGqNc559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:EE40520917EFBB9B|rigid:FELh/ycbYEOXUGmjtPmzAmKmImE false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:Q01560 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-12114|uniprotkb:D6VT60|ensemblfungi:YDR432W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:nop3_yeast(display_long)|uniprotkb:MTR13(gene name synonym)|uniprotkb:MTS1(gene name synonym)|uniprotkb:Mitochondrial targeting suppressor 1 protein(gene name synonym)|uniprotkb:Nuclear polyadenylated RNA-binding protein 1(gene name synonym)|uniprotkb:NPL3(gene name)|psi-mi:NPL3(display_short)|uniprotkb:NAB1(gene name synonym)|uniprotkb:YDR432W(locus name)|uniprotkb:D9461.19(orf name)|uniprotkb:NOP3(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764845|imex:IM-21416-24 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 ensemblfungi:YDR432W(gene)|ensemblfungi:YDR432W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006415"(translational termination)|go:"GO:0008143"("poly(A) binding")|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0042802"(identical protein binding)|go:"GO:2000805"("negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled")|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034166|interpro:IPR035979|rcsb pdb:2JD5|rcsb pdb:2JVO|rcsb pdb:2JVR|rcsb pdb:2OSQ|rcsb pdb:2OSR|refseq:NP_010720.3|sgd:S000002840|dip:DIP-6464N - crc64:383AF61033FB4AC2 crc64:024439E4B6578787 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:R/g8r9x82rdG8AThC5VQcbgY6u4559292 intact-crc:4C2370A3D1F96A0D|rigid:xAzUKhbWZ5V7lQg138zT5se2gSA false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q05610 uniprotkb:P38074 intact:EBI-31191|uniprotkb:Q66RE0|uniprotkb:D6VSQ5|ensemblfungi:YDR273W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:don1_yeast(display_long)|uniprotkb:DON1(gene name)|psi-mi:DON1(display_short)|uniprotkb:D9954.4(orf name)|uniprotkb:YDR273W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764841|imex:IM-21416-23 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010559.3|sgd:S000002681|dip:DIP-1577N|ensemblfungi:YDR273W(gene)|ensemblfungi:YDR273W_mRNA(transcript)|go:"GO:0005628"(prospore membrane)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0030476"(ascospore wall assembly)|go:"GO:0031624"(ubiquitin conjugating enzyme binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0051301"(cell division)|go:"GO:0070056"(prospore membrane leading edge)|interpro:IPR003892(Ubiquitin system component Cue)|interpro:IPR009060(UBA-like)|interpro:IPR041807 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:6E13542050862709 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:lwba8lbFDuhj4kIx6JdrOVlRF0s559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:91C38D400FC5D907|rigid:MN8F/IrheXZ281R/K5F1RzbRQq4 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P38811 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-24638|uniprotkb:D3DL49|ensemblfungi:YHR099W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:tra1_yeast(display_long)|uniprotkb:TRA1(gene name)|psi-mi:TRA1(display_short)|uniprotkb:p400 kDa component of SAGA(gene name synonym)|uniprotkb:YHR099W(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764837|imex:IM-21416-22 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_011967.1|sgd:S000001141|dip:DIP-805N|mint:P38811|ensemblfungi:YHR099W(gene)|ensemblfungi:YHR099W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0016301"(kinase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070209"(ASTRA complex)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR033317|interpro:IPR036940|rcsb pdb:5OJS|rcsb pdb:6IG9|rcsb pdb:6T9I|rcsb pdb:6T9J - crc64:383AF61033FB4AC2 crc64:AE3588676F5D5777 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:B/rkvJoIvK1Xi2SoNtFnFOdcp2c559292 intact-crc:26F213A197174B27|rigid:mLpgc8EUS1+U4v40EyItH9kbsik false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P23595 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-12752|uniprotkb:D6VRG5|ensemblfungi:YDL188C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:pp2a2_yeast(display_long)|uniprotkb:PPH22(gene name)|psi-mi:PPH22(display_short)|uniprotkb:SIS4(gene name synonym)|uniprotkb:YDL188C(locus name)|uniprotkb:D1271(orf name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764833|imex:IM-21416-21 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 ensemblfungi:YDL188C(gene)|ensemblfungi:YDL188C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006417"(regulation of translation)|go:"GO:0007015"(actin filament organization)|go:"GO:0007117"(budding cell bud growth)|go:"GO:0034399"(nuclear periphery)|go:"GO:0046872"(metal ion binding)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:2000198"(negative regulation of ribonucleoprotein complex localization)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-389513|reactome:R-SCE-6811558|reactome:R-SCE-69273|refseq:NP_010093.1|sgd:S000002347|mint:P23595|dip:DIP-2283N - crc64:383AF61033FB4AC2 crc64:549D3C6F1E2EB335 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:sKD3DJdRePGJ97regq2tgyswJ0E559292 intact-crc:7A35BE2FB1D62F85|rigid:SnpgtkCfV5tSLEXdNNM+nGKXftc false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q03306 uniprotkb:P38074 intact:EBI-37683|uniprotkb:D6VT91|ensemblfungi:YDR466W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:pkh3_yeast(display_long)|uniprotkb:Pkb-activating kinase homolog 3(gene name synonym)|uniprotkb:PKH3(gene name)|psi-mi:PKH3(display_short)|uniprotkb:YDR466W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764825|imex:IM-21416-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010754.1|sgd:S000002874|dip:DIP-8781N|mint:Q03306|ensemblfungi:YDR466W(gene)|ensemblfungi:YDR466W_mRNA(transcript)|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR039046 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:44715C40DD26B89E crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:xVQj2Bit8KX4kGKg1+3h56EBg+g559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:8E8F1DB9ABD50EF7|rigid:xLSQY99UmhBxFeb1cKX1fLuXI/s false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P38757 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-24435|uniprotkb:D3DKU7|ensemblfungi:YHR004C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:nem1_yeast(display_long)|uniprotkb:NEM1(gene name)|psi-mi:NEM1(display_short)|uniprotkb:YHR004C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764817|imex:IM-21416-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_011867.1|sgd:S000001046|dip:DIP-2440N|mint:P38757|go:"GO:0071071"(regulation of phospholipid biosynthetic process)|go:"GO:0071072"(negative regulation of phospholipid biosynthetic process)|go:"GO:0071595"(Nem1-Spo7 phosphatase complex)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:0140042"(lipid droplet formation)|go:"GO:1903740"(positive regulation of phosphatidate phosphatase activity)|interpro:IPR004274(NLI interacting factor)|interpro:IPR011948(Dullard-like phosphatase domain)|interpro:IPR023214|interpro:IPR036412|go:"GO:0046889"(positive regulation of lipid biosynthetic process)|ensemblfungi:YHR004C(gene)|ensemblfungi:YHR004C_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005811"(lipid droplet)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006998"(nuclear envelope organization)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0034613"(cellular protein localization) - crc64:383AF61033FB4AC2 crc64:4260748606E17062 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:/MOMTh4/2a448OwmUgC+a2qY+no559292 intact-crc:018EC8397AED4E8F|rigid:gtYc+60XbZ7Rb05l76g5II4W10Y false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:Q12236 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-9844|intact:EBI-2935811|uniprotkb:D6W1W8|ensemblfungi:YOL100W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:pkh2_yeast(display_long)|uniprotkb:YOL100W(locus name)|uniprotkb:HRC1081(orf name)|uniprotkb:PKH2(gene name)|psi-mi:PKH2(display_short)|uniprotkb:PKB-activating kinase homolog 2(gene name synonym) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764829|imex:IM-21416-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_014541.1|sgd:S000005460|go:"GO:0005634"(nucleus)|go:"GO:0005938"(cell cortex)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006897"(endocytosis)|go:"GO:0010606"(positive regulation of cytoplasmic mRNA processing body assembly)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032511"(late endosome to vacuole transport via multivesicular body sorting pathway)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0060211"("regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:0071902"(positive regulation of protein serine/threonine kinase activity)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|ensemblfungi:YOL100W(gene)|ensemblfungi:YOL100W_mRNA(transcript)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR039046|reactome:R-SCE-114604|reactome:R-SCE-1257604|reactome:R-SCE-165158|reactome:R-SCE-202424|reactome:R-SCE-2730905|reactome:R-SCE-389357|go:"GO:0000196"(cell wall integrity MAPK cascade)|go:"GO:0004672"(protein kinase activity)|reactome:R-SCE-392451|reactome:R-SCE-5218920|reactome:R-SCE-5218921|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|reactome:R-SCE-6804757|reactome:R-SCE-9634635|reactome:R-SCE-5625740|dip:DIP-6295N|mint:Q12236 - crc64:383AF61033FB4AC2 crc64:BE0DD9D49AC2EBC3 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:KzJ+WGY+PylRDsK1olfak8IyuXM559292 intact-crc:727F3CEE50FF7953|rigid:YgrbF0NKeh420mzc//PYrJY0o+M false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P38074 uniprotkb:P25298 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-15632|uniprotkb:D6VZN5|ensemblfungi:YMR061W psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:rna14_yeast(display_long)|uniprotkb:YM9796.14(orf name)|uniprotkb:YMR061W(locus name)|uniprotkb:RNA14(gene name)|psi-mi:RNA14(display_short) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764809|imex:IM-21416-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_013777.1|sgd:S000004665|go:"GO:0072423"(response to DNA damage checkpoint signaling)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR008847(Suppressor of forked)|interpro:IPR011990(Tetratricopeptide-like helical)|rcsb pdb:2L9B|ensemblfungi:YMR061W(gene)|ensemblfungi:YMR061W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0031123"(RNA 3'-end processing)|dip:DIP-1488N|mint:P25298 - crc64:383AF61033FB4AC2 crc64:102433295FE7CD63 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:Ful6ie8/P/XQWsmSjGP4HMQLFgE559292 intact-crc:A5493F5E749D9ACE|rigid:IX276rMKqWEr15Y3jv9hmis0g20 false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q12315 uniprotkb:P38074 intact:EBI-7635|uniprotkb:D6VRE7|ensemblfungi:YDL207W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:gle1_yeast(display_long)|uniprotkb:BRR3(gene name synonym)|uniprotkb:RSS1(gene name synonym)|uniprotkb:YDL207W(locus name)|uniprotkb:D1049(orf name)|uniprotkb:GLE1(gene name)|psi-mi:GLE1(display_short)|uniprotkb:Nuclear pore protein GLE1(gene name synonym)|uniprotkb:RNA export factor GLE1(gene name synonym)|uniprotkb:Nucleoporin GLE1(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764779|imex:IM-21416-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002366|refseq:NP_010074.1|mint:Q12315|dip:DIP-2350N|ensemblfungi:YDL207W(gene)|ensemblfungi:YDL207W_mRNA(transcript)|go:"GO:0000822"(inositol hexakisphosphate binding)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006397"(mRNA processing)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0006446"(regulation of translational initiation)|go:"GO:0006449"(regulation of translational termination)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0015031"(protein transport)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044614"(nuclear pore cytoplasmic filaments)|interpro:IPR012476(GLE1-like)|interpro:IPR038506|rcsb pdb:3PEU|rcsb pdb:3PEV|rcsb pdb:3RRM|rcsb pdb:3RRN|rcsb pdb:6B4E refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:C9C6B1513AF95711 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:1RI51/DOenI6DQvh2tErmJnDffI559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:0E1541498A121133|rigid:HFdxu52Dz6sgciQU7/58nTsrZxk false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P21264 uniprotkb:P38074 intact:EBI-14252|uniprotkb:D6W2I6|ensemblfungi:YOR128C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:pur6_yeast(display_long)|uniprotkb:AIR carboxylase(gene name synonym)|uniprotkb:ADE2(gene name)|psi-mi:ADE2(display_short)|uniprotkb:YOR128C(locus name)|uniprotkb:O3293(orf name)|uniprotkb:YOR3293C(orf name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0111"(dihydrofolate reductase reconstruction) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764905|imex:IM-21416-39 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000005654|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006144"(purine nucleobase metabolic process)|go:"GO:0006164"(purine nucleotide biosynthetic process)|go:"GO:0006189"('de novo' IMP biosynthetic process)|go:"GO:0043727"(5-amino-4-imidazole carboxylate lyase activity)|go:"GO:0046872"(metal ion binding)|interpro:IPR000031("1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase")|interpro:IPR003135(ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type)|interpro:IPR005875(Phosphoribosylaminoimidazole carboxylase, ATPase subunit)|interpro:IPR011054(Rudiment single hybrid motif)|interpro:IPR011761(ATP-grasp fold)|interpro:IPR013815(ATP-grasp fold, subdomain 1)|interpro:IPR016185(PreATP-grasp-like fold)|interpro:IPR016301(Phosphoribosylaminoimidazole carboxylase)|interpro:IPR033747|interpro:IPR040686|ensemblfungi:YOR128C(gene)|ensemblfungi:YOR128C_mRNA(transcript)|go:"GO:0004638"(phosphoribosylaminoimidazole carboxylase activity)|refseq:NP_014771.3|mint:P21264|dip:DIP-1171N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:62D2693916F97AA0 crc64:383AF61033FB4AC2 figure legend:Supp. Table 2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:WpDoDErdwmYDdPD91SoorpIG/r4559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:BAB719F0B382F4BB|rigid:btHESW5ZHZK4rGlE9WLBN67A6Bw false - - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:P22204 uniprotkb:P38074 intact:EBI-5569|uniprotkb:D6VUM4|ensemblfungi:YGR092W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:dbf2_yeast(display_long)|uniprotkb:DBF2(gene name)|psi-mi:DBF2(display_short)|uniprotkb:Dumbbell forming protein 2(gene name synonym)|uniprotkb:YGR092W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764699|imex:IM-21416-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003324|refseq:NP_011606.3|dip:DIP-2319N|reactome:R-SCE-2028269|ensemblfungi:YGR092W(gene)|ensemblfungi:YGR092W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003723"(RNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007049"(cell cycle)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034973"(Sid2-Mob1 complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901900"(regulation of protein localization to cell division site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|rcsb pdb:5NCN refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:648C565D5CE7117D crc64:383AF61033FB4AC2 antagonist:Rapamycin|figure legend:Fig. 6C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:+HNtG1zL+t9L3ITf/MH16z6H5uY559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:7D39B48898D5EFD1|rigid:xD3CqyRf1ndsyhCFk9GX7VQ3U7Q false tag:?-? calmodulin binding peptide plus protein a tag:?-?|mutation disrupting interaction strength:9-9 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P38074 uniprotkb:P38074 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764568|imex:IM-21416-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:383AF61033FB4AC2 crc64:383AF61033FB4AC2 antagonist:Rapamycin|figure legend:Fig. 4B, 5A/B, 6C|antagonist:Alkaline phosphatase|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:53573FF3DAA8833B|rigid:qcQrfIgTDjRrdKPo0TxcKAAM/l0 false calmodulin binding peptide plus protein a tag:?-?|mutation disrupting interaction strength:9-9 tag:?-?|mutation disrupting interaction strength:9-9 - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P23595 uniprotkb:P38074 intact:EBI-12752|uniprotkb:D6VRG5|ensemblfungi:YDL188C intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:pp2a2_yeast(display_long)|uniprotkb:PPH22(gene name)|psi-mi:PPH22(display_short)|uniprotkb:SIS4(gene name synonym)|uniprotkb:YDL188C(locus name)|uniprotkb:D1271(orf name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-8764719|imex:IM-21416-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDL188C(gene)|ensemblfungi:YDL188C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006417"(regulation of translation)|go:"GO:0007015"(actin filament organization)|go:"GO:0007117"(budding cell bud growth)|go:"GO:0034399"(nuclear periphery)|go:"GO:0046872"(metal ion binding)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:2000198"(negative regulation of ribonucleoprotein complex localization)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-389513|reactome:R-SCE-6811558|reactome:R-SCE-69273|refseq:NP_010093.1|sgd:S000002347|mint:P23595|dip:DIP-2283N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 - crc64:549D3C6F1E2EB335 crc64:383AF61033FB4AC2 agonist:Rapamycin|figure legend:Fig. 6C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) - 2013/09/18 2014/10/16 rogid:sKD3DJdRePGJ97regq2tgyswJ0E559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:D110AE731C0451D4|rigid:SnpgtkCfV5tSLEXdNNM+nGKXftc false tag:?-? mutation disrupting interaction strength:9-9|calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P22204 uniprotkb:P38074 intact:EBI-5569|uniprotkb:D6VUM4|ensemblfungi:YGR092W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:dbf2_yeast(display_long)|uniprotkb:DBF2(gene name)|psi-mi:DBF2(display_short)|uniprotkb:Dumbbell forming protein 2(gene name synonym)|uniprotkb:YGR092W(locus name) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0424"(protein kinase assay) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0217"(phosphorylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-8764995|imex:IM-21416-44 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003324|refseq:NP_011606.3|dip:DIP-2319N|reactome:R-SCE-2028269|ensemblfungi:YGR092W(gene)|ensemblfungi:YGR092W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003723"(RNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007049"(cell cycle)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034973"(Sid2-Mob1 complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901900"(regulation of protein localization to cell division site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|rcsb pdb:5NCN refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 go:"GO:0004672"(protein kinase activity)|go:"GO:0006468"(protein phosphorylation) crc64:648C565D5CE7117D crc64:383AF61033FB4AC2 figure legend:Supp. Fig 4A|causality statement:P40484 is required for phosphorylation of P38074 by P22204|causality statement:P22204 increases activity of P38074|resulting-ptm:P12345 ser-99 O-phospho-L-serine|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/09/18 2014/10/16 rogid:+HNtG1zL+t9L3ITf/MH16z6H5uY559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:8F27EE3F5698DF58|rigid:Q57v4nIbfrjLBLaXMX/VVMp7eTs false flag tag:?-?|his tag:?-?|ha tag:?-?|mutation decreasing interaction rate:305-305 calmodulin binding peptide plus protein a tag:?-?|mutation decreasing interaction rate:9-9|mutation decreasing interaction rate:9-9 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P22204 uniprotkb:P40484 intact:EBI-5569|uniprotkb:D6VUM4|ensemblfungi:YGR092W intact:EBI-11119|ensemblfungi:YIL106W|uniprotkb:D6VVI1 psi-mi:dbf2_yeast(display_long)|uniprotkb:DBF2(gene name)|psi-mi:DBF2(display_short)|uniprotkb:Dumbbell forming protein 2(gene name synonym)|uniprotkb:YGR092W(locus name) psi-mi:mob1_yeast(display_long)|uniprotkb:MPS1 binder 1(gene name synonym)|uniprotkb:YIL106W(locus name)|uniprotkb:MOB1(gene name)|psi-mi:MOB1(display_short)|uniprotkb:Maintenance of ploidy protein MOB1(gene name synonym) psi-mi:"MI:0424"(protein kinase assay) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0217"(phosphorylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-8764995|imex:IM-21416-44 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0684"(ancillary) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003324|refseq:NP_011606.3|dip:DIP-2319N|reactome:R-SCE-2028269|ensemblfungi:YGR092W(gene)|ensemblfungi:YGR092W_mRNA(transcript)|go:"GO:0000280"(nuclear division)|go:"GO:0003723"(RNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007049"(cell cycle)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0032465"(regulation of cytokinesis)|go:"GO:0034973"(Sid2-Mob1 complex)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901900"(regulation of protein localization to cell division site)|interpro:IPR000719(Protein kinase, core)|interpro:IPR000961(Protein kinase, C-terminal)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR017892|rcsb pdb:5NCN ensemblfungi:YIL106W(gene)|ensemblfungi:YIL106W_mRNA(transcript)|go:"GO:0000281"(mitotic cytokinesis)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0005737"(cytoplasm)|go:"GO:0005816"(spindle pole body)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0019207"(kinase regulator activity)|go:"GO:0034399"(nuclear periphery)|go:"GO:0044732"(mitotic spindle pole body)|go:"GO:0046872"(metal ion binding)|interpro:IPR005301(Mob1/phocein)|interpro:IPR036703|rcsb pdb:2HJN|rcsb pdb:5NCN|go:"GO:0034973"(Sid2-Mob1 complex)|reactome:R-SCE-2028269|refseq:NP_012160.2|sgd:S000001368|dip:DIP-2320N go:"GO:0004672"(protein kinase activity)|go:"GO:0006468"(protein phosphorylation) crc64:648C565D5CE7117D crc64:0B50B1D18D7EF54A figure legend:Supp. Fig 4A|causality statement:P40484 is required for phosphorylation of P38074 by P22204|causality statement:P22204 increases activity of P38074|resulting-ptm:P12345 ser-99 O-phospho-L-serine|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/09/18 2014/10/16 rogid:+HNtG1zL+t9L3ITf/MH16z6H5uY559292 rogid:ebfiUwwNGsntXIKhpQOH0bvT190559292 intact-crc:8F27EE3F5698DF58|rigid:Q57v4nIbfrjLBLaXMX/VVMp7eTs false flag tag:?-?|his tag:?-?|ha tag:?-?|mutation decreasing interaction rate:305-305 his tag:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P32505 uniprotkb:P38074 intact:EBI-11770|ensemblfungi:YGL122C|uniprotkb:D6VU26 intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:nab2_yeast(display_long)|uniprotkb:YGL122C(locus name)|uniprotkb:NAB2(gene name)|psi-mi:NAB2(display_short) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0515"(methyltransferase assay) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0213"(methylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-8764596|imex:IM-21416-3 - - psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGL122C(gene)|ensemblfungi:YGL122C_mRNA(transcript)|go:"GO:0000049"(tRNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0008097"(5S rRNA binding)|go:"GO:0008143"("poly(A) binding")|go:"GO:0008312"(7S RNA binding)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0033204"(ribonuclease P RNA binding)|go:"GO:0043488"(regulation of mRNA stability)|go:"GO:0046872"(metal ion binding)|go:"GO:1900152"(negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:1900364"(negative regulation of mRNA polyadenylation)|interpro:IPR021083|interpro:IPR040366|go:"GO:0045945"(positive regulation of transcription by RNA polymerase III)|interpro:IPR041044|interpro:IPR043094|rcsb pdb:2JPS|rcsb pdb:2LHN|rcsb pdb:2V75|rcsb pdb:3LCN|rcsb pdb:3ZJ1|rcsb pdb:3ZJ2|rcsb pdb:4JLQ|rcsb pdb:5L2L|refseq:NP_011393.3|sgd:S000003090|mint:P32505|dip:DIP-1331N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 go:"GO:0006479"(protein methylation)|go:"GO:0008276"(protein methyltransferase activity) crc64:40335C3D4658DD91 crc64:383AF61033FB4AC2 figure legend:Fig. 5C, Supp. Fig. 1C, 4B|comment:In the absence of Dbf2 kinase activity, Hmt1 did not methylate Npl3 or Nab2|antagonist:Rapamycin|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/09/18 2014/10/16 rogid:tNdhCVVTRYjqg7BES5wD2Gg4rjw559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:8010C0DB36C27475|rigid:Hq4w//q7+WvZ7mmyt9w+KQh9x34 false calmodulin binding peptide plus protein a tag:?-? calmodulin binding peptide plus protein a tag:?-?|mutation disrupting interaction rate:9-9 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography) uniprotkb:Q01560 uniprotkb:P38074 intact:EBI-12114|uniprotkb:D6VT60|ensemblfungi:YDR432W intact:EBI-8394|uniprotkb:D6VQ34|ensemblfungi:YBR034C psi-mi:nop3_yeast(display_long)|uniprotkb:MTR13(gene name synonym)|uniprotkb:MTS1(gene name synonym)|uniprotkb:Mitochondrial targeting suppressor 1 protein(gene name synonym)|uniprotkb:Nuclear polyadenylated RNA-binding protein 1(gene name synonym)|uniprotkb:NPL3(gene name)|psi-mi:NPL3(display_short)|uniprotkb:NAB1(gene name synonym)|uniprotkb:YDR432W(locus name)|uniprotkb:D9461.19(orf name)|uniprotkb:NOP3(gene name synonym) psi-mi:hmt1_yeast(display_long)|uniprotkb:Major type I protein arginine N-methyltransferase(gene name synonym)|uniprotkb:HMT1(gene name)|psi-mi:HMT1(display_short)|uniprotkb:ODP1(gene name synonym)|uniprotkb:RMT1(gene name synonym)|uniprotkb:hnRNP arginine N-methyltransferase(gene name synonym)|uniprotkb:YBR0320(orf name)|uniprotkb:YBR034C(locus name) psi-mi:"MI:0515"(methyltransferase assay) Messier et al. (2013) pubmed:23706744|imex:IM-21416 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0213"(methylation reaction) psi-mi:"MI:0469"(IntAct) intact:EBI-8764583|imex:IM-21416-2 - - psi-mi:"MI:0502"(enzyme target) psi-mi:"MI:0501"(enzyme) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR432W(gene)|ensemblfungi:YDR432W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006415"(translational termination)|go:"GO:0008143"("poly(A) binding")|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0031370"(eukaryotic initiation factor 4G binding)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0042802"(identical protein binding)|go:"GO:2000805"("negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled")|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR034166|interpro:IPR035979|rcsb pdb:2JD5|rcsb pdb:2JVO|rcsb pdb:2JVR|rcsb pdb:2OSQ|rcsb pdb:2OSR|refseq:NP_010720.3|sgd:S000002840|dip:DIP-6464N refseq:NP_009590.1|sgd:S000000238|dip:DIP-2608N|mint:P38074|ensemblfungi:YBR034C(gene)|ensemblfungi:YBR034C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0018216"(peptidyl-arginine methylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0035241"(protein-arginine omega-N monomethyltransferase activity)|go:"GO:0035242"(protein-arginine omega-N asymmetric methyltransferase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0060567"(negative regulation of DNA-templated transcription, termination)|interpro:IPR025799|interpro:IPR029063|rcsb pdb:1G6Q|reactome:R-SCE-3214858|reactome:R-SCE-9018519 go:"GO:0006479"(protein methylation)|go:"GO:0008276"(protein methyltransferase activity) crc64:024439E4B6578787 crc64:383AF61033FB4AC2 figure legend:Fig. 5C, Supp. Fig. 1C|comment:In the absence of Dbf2 kinase activity, Hmt1 did not methylate Npl3 or Nab2|antagonist:Rapamycin|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/09/18 2014/10/16 rogid:R/g8r9x82rdG8AThC5VQcbgY6u4559292 rogid:93GjQK1ABHk9/P5i/DEUxJo4rZM559292 intact-crc:9EDE9333D61D618A|rigid:xAzUKhbWZ5V7lQg138zT5se2gSA false calmodulin binding peptide plus protein a tag:?-? calmodulin binding peptide plus protein a tag:?-?|mutation disrupting interaction rate:9-9 - - psi-mi:"MI:0821"(molecular weight estimation by autoradiography) psi-mi:"MI:0821"(molecular weight estimation by autoradiography)