#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q46705 uniprotkb:Q46702 intact:EBI-8793037 intact:EBI-8793044 psi-mi:q46705_ecolx(display_long)|uniprotkb:traF(gene name)|psi-mi:traF(display_short) psi-mi:q46702_ecolx(display_long)|uniprotkb:traN(gene name)|psi-mi:traN(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-8793035|imex:IM-21576-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0016021"(integral component of membrane)|interpro:IPR005498(Bacterial conjugation TrbI-like protein)|interpro:IPR042217|rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46705|dip:DIP-59306N rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46702|dip:DIP-59307N - crc64:3F94CFD32ED8316B crc64:43ACC8EA9591FBAB figure legend:f1b|comment:"Digestion of the FLCC with elastase produced a stable truncated complex of around 880 kDa in molecular weight, termed the ‘CCelastase’ complex (Figure 1). The N-terminal sequencing of the two main bands in SDS-PAGE gels confirms that the complex is made of full-length TraO/VirB9 and the C-terminal domain of TraF/VirB10 starting at N161SPGA (the integrity of the C terminus of TraF/VirB10CTwas confirmed by western blotting analysis of the Strep-tag present at the C terminus of the TraF/ VirB10 construct). Therefore, the IL of this complex is only made of TraO/VirB9NT (Figure 1). The expected molecular weight of a 14-mer for this new truncated complex is B830 kDa, which is very close to the measured molecular weight indicated above"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:mZQ2W+QOEi3YR3r65VUIGsq1uUE562 rogid:PelN1kAP3SU0xdydQhO2QvHWrxU562 intact-crc:93CA955B2E623558|rigid:WL1/YE0EtX/VHq/qAi4l+6NvD8A false strep tag:c-c - - - psi-mi:"MI:0039"(edman degradation) psi-mi:"MI:0039"(edman degradation) uniprotkb:Q46705 uniprotkb:Q46704 intact:EBI-8793037 intact:EBI-8793050 psi-mi:q46705_ecolx(display_long)|uniprotkb:traF(gene name)|psi-mi:traF(display_short) psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-8793035|imex:IM-21576-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0016021"(integral component of membrane)|interpro:IPR005498(Bacterial conjugation TrbI-like protein)|interpro:IPR042217|rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46705|dip:DIP-59306N interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N - crc64:3F94CFD32ED8316B crc64:DCAE0E16EEB542FC figure legend:f1b|comment:"Digestion of the FLCC with elastase produced a stable truncated complex of around 880 kDa in molecular weight, termed the ‘CCelastase’ complex (Figure 1). The N-terminal sequencing of the two main bands in SDS-PAGE gels confirms that the complex is made of full-length TraO/VirB9 and the C-terminal domain of TraF/VirB10 starting at N161SPGA (the integrity of the C terminus of TraF/VirB10CTwas confirmed by western blotting analysis of the Strep-tag present at the C terminus of the TraF/ VirB10 construct). Therefore, the IL of this complex is only made of TraO/VirB9NT (Figure 1). The expected molecular weight of a 14-mer for this new truncated complex is B830 kDa, which is very close to the measured molecular weight indicated above"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:mZQ2W+QOEi3YR3r65VUIGsq1uUE562 rogid:d7V17+728ycIOavoJR8qtSeuemI562 intact-crc:93CA955B2E623558|rigid:WL1/YE0EtX/VHq/qAi4l+6NvD8A false strep tag:c-c - - - psi-mi:"MI:0039"(edman degradation) psi-mi:"MI:0039"(edman degradation) uniprotkb:Q46704 uniprotkb:Q46705 intact:EBI-8793050 intact:EBI-8793037 psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:q46705_ecolx(display_long)|uniprotkb:traF(gene name)|psi-mi:traF(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-8793072|imex:IM-21576-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N go:"GO:0016021"(integral component of membrane)|interpro:IPR005498(Bacterial conjugation TrbI-like protein)|interpro:IPR042217|rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46705|dip:DIP-59306N - crc64:DCAE0E16EEB542FC crc64:3F94CFD32ED8316B figure legend:f1b|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:d7V17+728ycIOavoJR8qtSeuemI562 rogid:mZQ2W+QOEi3YR3r65VUIGsq1uUE562 intact-crc:4835E5D0DCD4CEC1|rigid:eFnBFs9SasupXkLo5qHkOSGhIAU false - binding-associated region:161-386|strep tag:c-c - - psi-mi:"MI:0039"(edman degradation) psi-mi:"MI:0039"(edman degradation) uniprotkb:Q46702 uniprotkb:Q46704 intact:EBI-8793044 intact:EBI-8793050 psi-mi:q46702_ecolx(display_long)|uniprotkb:traN(gene name)|psi-mi:traN(display_short) psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:"MI:0071"(molecular sieving) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-8793108|imex:IM-21576-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46702|dip:DIP-59307N interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N - crc64:43ACC8EA9591FBAB crc64:DCAE0E16EEB542FC figure legend:f1c|comment:"Digestion of the FLCC with elastase produced a stable truncated complex of around 880 kDa in molecular weight, termed the ‘CCelastase’ complex (Figure 1). The N-terminal sequencing of the two main bands in SDS-PAGE gels confirms that the complex is made of full-length TraO/VirB9 and the C-terminal domain of TraF/VirB10 starting at N161SPGA (the integrity of the C terminus of TraF/VirB10CTwas confirmed by western blotting analysis of the Strep-tag present at the C terminus of the TraF/ VirB10 construct). Therefore, the IL of this complex is only made of TraO/VirB9NT (Figure 1). The expected molecular weight of a 14-mer for this new truncated complex is B830 kDa, which is very close to the measured molecular weight indicated above"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:PelN1kAP3SU0xdydQhO2QvHWrxU562 rogid:d7V17+728ycIOavoJR8qtSeuemI562 intact-crc:BC16752B0A7B6AB3|rigid:WL1/YE0EtX/VHq/qAi4l+6NvD8A false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q46702 uniprotkb:Q46705 intact:EBI-8793044 intact:EBI-8793037 psi-mi:q46702_ecolx(display_long)|uniprotkb:traN(gene name)|psi-mi:traN(display_short) psi-mi:q46705_ecolx(display_long)|uniprotkb:traF(gene name)|psi-mi:traF(display_short) psi-mi:"MI:0071"(molecular sieving) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0471"(MINT) intact:EBI-8793108|imex:IM-21576-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46702|dip:DIP-59307N go:"GO:0016021"(integral component of membrane)|interpro:IPR005498(Bacterial conjugation TrbI-like protein)|interpro:IPR042217|rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46705|dip:DIP-59306N - crc64:43ACC8EA9591FBAB crc64:3F94CFD32ED8316B figure legend:f1c|comment:"Digestion of the FLCC with elastase produced a stable truncated complex of around 880 kDa in molecular weight, termed the ‘CCelastase’ complex (Figure 1). The N-terminal sequencing of the two main bands in SDS-PAGE gels confirms that the complex is made of full-length TraO/VirB9 and the C-terminal domain of TraF/VirB10 starting at N161SPGA (the integrity of the C terminus of TraF/VirB10CTwas confirmed by western blotting analysis of the Strep-tag present at the C terminus of the TraF/ VirB10 construct). Therefore, the IL of this complex is only made of TraO/VirB9NT (Figure 1). The expected molecular weight of a 14-mer for this new truncated complex is B830 kDa, which is very close to the measured molecular weight indicated above"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:PelN1kAP3SU0xdydQhO2QvHWrxU562 rogid:mZQ2W+QOEi3YR3r65VUIGsq1uUE562 intact-crc:BC16752B0A7B6AB3|rigid:WL1/YE0EtX/VHq/qAi4l+6NvD8A false - strep tag:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q46704 uniprotkb:Q46705 intact:EBI-8793050 intact:EBI-8793037 psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:q46705_ecolx(display_long)|uniprotkb:traF(gene name)|psi-mi:traF(display_short) psi-mi:"MI:0071"(molecular sieving) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-8793099|imex:IM-21576-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N go:"GO:0016021"(integral component of membrane)|interpro:IPR005498(Bacterial conjugation TrbI-like protein)|interpro:IPR042217|rcsb pdb:3JQO|rcsb pdb:3ZBI|mint:Q46705|dip:DIP-59306N - crc64:DCAE0E16EEB542FC crc64:3F94CFD32ED8316B figure legend:f1c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:d7V17+728ycIOavoJR8qtSeuemI562 rogid:mZQ2W+QOEi3YR3r65VUIGsq1uUE562 intact-crc:CBF9B2CA682C1AB6|rigid:eFnBFs9SasupXkLo5qHkOSGhIAU false - binding-associated region:161-386|strep tag:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q46704 uniprotkb:Q46704 intact:EBI-8793050 intact:EBI-8793050 psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:q46704_ecolx(display_long)|uniprotkb:traO(gene name)|psi-mi:traO(display_short) psi-mi:"MI:0040"(electron microscopy) Rivera-Calzada et al. (2013) pubmed:23511972|imex:IM-21576 taxid:562(ecolx)|taxid:562(Escherichia coli) taxid:562(ecolx)|taxid:562(Escherichia coli) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0471"(MINT) intact:EBI-8793234|imex:IM-21576-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N|emdb:EMD-2233|pdbe:2ypw interpro:IPR010258(Conjugal transfer, TrbG/VirB9/CagX)|interpro:IPR033645|interpro:IPR038161|rcsb pdb:2YPW|rcsb pdb:3JQO|rcsb pdb:3ZBI|rcsb pdb:3ZBJ|mint:Q46704|dip:DIP-59308N|emdb:EMD-2233|pdbe:2ypw emdb:EMD-2232|pdbe:3zbi|pdbe:3zbj crc64:DCAE0E16EEB542FC crc64:DCAE0E16EEB542FC figure legend:f2|comment:"Digestion of the FLCC with elastase produced a stable truncated complex of around 880 kDa in molecular weight, termed the ‘CCelastase’ complex (Figure 1). The N-terminal sequencing of the two main bands in SDS-PAGE gels confirms that the complex is made of full-length TraO/VirB9 and the C-terminal domain of TraF/VirB10 starting at N161SPGA (the integrity of the C terminus of TraF/VirB10CTwas confirmed by western blotting analysis of the Strep-tag present at the C terminus of the TraF/ VirB10 construct). Therefore, the IL of this complex is only made of TraO/VirB9NT (Figure 1). The expected molecular weight of a 14-mer for this new truncated complex is B830 kDa, which is very close to the measured molecular weight indicated above"|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/10/11 2014/10/16 rogid:d7V17+728ycIOavoJR8qtSeuemI562 rogid:d7V17+728ycIOavoJR8qtSeuemI562 intact-crc:7304554B0B6C6228|rigid:Y4aTk6j2uXuWtu2ruQOIRbxwpq4 false - - 14 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)