#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:A0A0H2UPA7 uniprotkb:A0A0H2UNJ7 intact:EBI-6472167|ensemblbacteria:AAK74919 intact:EBI-6472170|ensemblbacteria:AAK74586 psi-mi:a0a0h2upa7_strpn(display_long)|uniprotkb:SP_0782(locus name) psi-mi:a0a0h2unj7_strpn(display_long)|uniprotkb:SP_0423(locus name)|uniprotkb:accB(gene name)|psi-mi:accB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472164|imex:IM-18537-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74919(transcript)|ensemblbacteria:SP_0782(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|refseq:WP_001843933.1|rcsb pdb:2L3A|rcsb pdb:3OBH|rcsb pdb:4G06|interpro:IPR003173(Transcriptional coactivator p15)|interpro:IPR017154(Uncharacterised conserved protein UCP037246)|uniprotkb:Q97RM2(uniprot-removed-ac)|rcsb pdb:5ZKM ensemblbacteria:AAK74586(transcript)|ensemblbacteria:SP_0423(gene)|go:"GO:0003989"(acetyl-CoA carboxylase activity)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0009317"(acetyl-CoA carboxylase complex)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR001249(Acetyl-CoA biotin carboxyl carrier)|interpro:IPR001882(Biotin-binding site)|interpro:IPR011053(Single hybrid motif)|uniprotkb:I6L8P7(uniprot-removed-ac)|refseq:WP_001052244.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dxXe/q1G2KD1sqMUSDBh+2hMEdI170187 rogid:unmV8krjj0KdHwXQtBfwAxchEUQ170187 intact-crc:CA8FB75CC60A4DE8|rigid:rSqC2pvDrBWcur/mjFPEAG/ZOcg false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF0 uniprotkb:Q97NE3 intact:EBI-6472153|ensemblbacteria:AAK75923 intact:EBI-6472146|ensemblbacteria:AAK76159 psi-mi:a0a0h2urf0_strpn(display_long)|uniprotkb:SP_1851(locus name) psi-mi:syy_strpn(display_long)|uniprotkb:Tyrosyl-tRNA synthetase(gene name synonym)|uniprotkb:SP_2100(locus name)|uniprotkb:tyrS(gene name)|psi-mi:tyrS(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472150|imex:IM-18537-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75923(transcript)|ensemblbacteria:SP_1851(gene)|go:"GO:0047617"(acyl-CoA hydrolase activity)|rcsb pdb:4I82|interpro:IPR003736(Phenylacetic acid degradation-related protein)|interpro:IPR006683(Thioesterase superfamily)|interpro:IPR029069|uniprotkb:Q97NZ8(uniprot-removed-ac)|refseq:WP_000651213.1|interpro:IPR039298 ensemblbacteria:AAK76159(transcript)|ensemblbacteria:SP_2100(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0004831"(tyrosine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006437"(tyrosyl-tRNA aminoacylation)|refseq:WP_000546887.1|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002305(Aminoacyl-tRNA synthetase, class Ib)|interpro:IPR002307(Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)|interpro:IPR002942(RNA-binding S4)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR024088|interpro:IPR024107|interpro:IPR036986 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Nm8s+TWvLS7fI50ADYOCEUZktYk170187 rogid:WNM9U67JY/53kDeCA4jxCjBn3LA170187 intact-crc:4B9D0A5DF5E02B1C|rigid:nasMw0ZXykNr9Xbb+toZOR9QPAY false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPA7 uniprotkb:A0A0H2UNJ7 intact:EBI-6472167|ensemblbacteria:AAK74919 intact:EBI-6472170|ensemblbacteria:AAK74586 psi-mi:a0a0h2upa7_strpn(display_long)|uniprotkb:SP_0782(locus name) psi-mi:a0a0h2unj7_strpn(display_long)|uniprotkb:SP_0423(locus name)|uniprotkb:accB(gene name)|psi-mi:accB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472182|imex:IM-18537-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74919(transcript)|ensemblbacteria:SP_0782(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|refseq:WP_001843933.1|rcsb pdb:2L3A|rcsb pdb:3OBH|rcsb pdb:4G06|interpro:IPR003173(Transcriptional coactivator p15)|interpro:IPR017154(Uncharacterised conserved protein UCP037246)|uniprotkb:Q97RM2(uniprot-removed-ac)|rcsb pdb:5ZKM ensemblbacteria:AAK74586(transcript)|ensemblbacteria:SP_0423(gene)|go:"GO:0003989"(acetyl-CoA carboxylase activity)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0009317"(acetyl-CoA carboxylase complex)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR001249(Acetyl-CoA biotin carboxyl carrier)|interpro:IPR001882(Biotin-binding site)|interpro:IPR011053(Single hybrid motif)|uniprotkb:I6L8P7(uniprot-removed-ac)|refseq:WP_001052244.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dxXe/q1G2KD1sqMUSDBh+2hMEdI170187 rogid:unmV8krjj0KdHwXQtBfwAxchEUQ170187 intact-crc:777D53E782B5D69C|rigid:rSqC2pvDrBWcur/mjFPEAG/ZOcg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN91 uniprotkb:A0A0H2URZ0 intact:EBI-6472199|ensemblbacteria:AAK74365 intact:EBI-6472196|ensemblbacteria:AAK76067 psi-mi:a0a0h2un91_strpn(display_long)|uniprotkb:SP_0184(locus name) psi-mi:a0a0h2urz0_strpn(display_long)|uniprotkb:SP_2000(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472193|imex:IM-18537-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74365(transcript)|ensemblbacteria:SP_0184(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009214(Uncharacterised conserved protein UCP033111, membrane associated)|uniprotkb:Q97SX9(uniprot-removed-ac) ensemblbacteria:AAK76067(transcript)|ensemblbacteria:SP_2000(gene)|go:"GO:0000160"(phosphorelay signal transduction system)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR000792(Bacterial regulatory protein, LuxR)|interpro:IPR001789(Signal transduction response regulator, receiver region)|interpro:IPR011006(CheY-like)|interpro:IPR016032(Signal transduction response regulator, C-terminal effector)|uniprotkb:I6L8S5(uniprot-removed-ac)|refseq:WP_000866703.1|interpro:IPR036388|interpro:IPR039420 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:/46BFODW8bgC1dhws3CDEofEPPQ170187 rogid:xnNRVo9cbuKxhNupvN32Lc1J+cE170187 intact-crc:3F8C70890E687694|rigid:3zewNb9XCO3bzgbkFxoZwmztmGg false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97T03 uniprotkb:A0A0H2UNE9 intact:EBI-6472210|ensemblbacteria:AAK74340 intact:EBI-6472213|ensemblbacteria:AAK74525 psi-mi:nrdil_strpn(display_long)|uniprotkb:SP_0158(locus name) psi-mi:a0a0h2une9_strpn(display_long)|uniprotkb:SP_0352(locus name)|uniprotkb:cps4G(gene name)|psi-mi:cps4G(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472217|imex:IM-18537-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74340(transcript)|ensemblbacteria:SP_0158(gene)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0010181"(FMN binding)|refseq:WP_000849621.1|interpro:IPR004465(Ribonucleotide reductase Class Ib, NrdI)|interpro:IPR029039 ensemblbacteria:SP_0352(gene)|ensemblbacteria:AAK74525(transcript)|uniprotkb:I6L8X5(uniprot-removed-ac)|refseq:WP_001264338.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:e6bQv3wnVekK8oEGpS3BlcJBLWE170187 rogid:GdX98H5hLI/P5eX9Y8ieq02ZACY170187 intact-crc:583B62C5920D3256|rigid:2Vz1e/4bLVwJ7ehuHt82jlrVmm8 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P00546 uniprotkb:P09119 intact:EBI-4253|uniprotkb:D6VQF5|ensemblfungi:YBR160W intact:EBI-4447|uniprotkb:D6VVZ7|ensemblfungi:YJL194W psi-mi:cdk1_yeast(display_long)|uniprotkb:CDC28(gene name)|psi-mi:CDC28(display_short)|uniprotkb:CDK1(gene name synonym)|uniprotkb:HSL5(gene name synonym)|uniprotkb:SRM5(gene name synonym)|uniprotkb:YBR1211(orf name)|uniprotkb:YBR160W(locus name)|uniprotkb:Cell division control protein 28(gene name synonym)|uniprotkb:Cell division protein kinase 1(gene name synonym) psi-mi:cdc6_yeast(display_long)|uniprotkb:CDC6(gene name)|psi-mi:CDC6(display_short)|uniprotkb:J0347(orf name)|uniprotkb:YJL194W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472228|imex:IM-18537-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000364|refseq:NP_009718.3|dip:DIP-1039N|mint:P00546|ensemblfungi:YBR160W(gene)|ensemblfungi:YBR160W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0000706"(meiotic DNA double-strand break processing)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000729"(DNA double-strand break processing)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004693"(cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006370"(7-methylguanosine mRNA capping)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006892"(post-Golgi vesicle-mediated transport)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007165"(signal transduction)|go:"GO:0010389"(regulation of G2/M transition of mitotic cell cycle)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010568"(regulation of budding cell apical bud growth)|go:"GO:0010570"(regulation of filamentous growth)|go:"GO:0010571"(positive regulation of nuclear cell cycle DNA replication)|go:"GO:0010696"(positive regulation of mitotic spindle pole body separation)|go:"GO:0010898"(positive regulation of triglyceride catabolic process)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0030332"(cyclin binding)|go:"GO:0032210"(regulation of telomere maintenance via telomerase)|go:"GO:0034504"(protein localization to nucleus)|go:"GO:0042393"(histone binding)|go:"GO:0044257"(cellular protein catabolic process)|go:"GO:0045819"(positive regulation of glycogen catabolic process)|go:"GO:0045875"(negative regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0045931"(positive regulation of mitotic cell cycle)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051301"(cell division)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0051447"(negative regulation of meiotic cell cycle)|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0090169"(regulation of spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901319"(positive regulation of trehalose catabolic process)|go:"GO:1902596"(negative regulation of DNA replication origin binding)|go:"GO:1902889"(protein localization to spindle microtubule)|go:"GO:1903500"(negative regulation of mitotic actomyosin contractile ring assembly)|go:"GO:1903827"|go:"GO:1904291"(positive regulation of mitotic DNA damage checkpoint)|go:"GO:1905168"(positive regulation of double-strand break repair via homologous recombination)|go:"GO:1905634"(regulation of protein localization to chromatin)|go:"GO:1990139"(protein localization to nuclear periphery)|go:"GO:1990758"(mitotic sister chromatid biorientation)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-68949|reactome:R-SCE-68962|reactome:R-SCE-69017|reactome:R-SCE-69202|reactome:R-SCE-69656 refseq:NP_012341.1|sgd:S000003730|mint:P09119|dip:DIP-2267N|ensemblfungi:YJL194W(gene)|ensemblfungi:YJL194W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0003682"(chromatin binding)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031261"(DNA replication preinitiation complex)|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0033314"(mitotic DNA replication checkpoint signaling)|go:"GO:0051301"(cell division)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR015163(CDC6, C terminal)|interpro:IPR016314(Cell division control, Cdc6)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|rcsb pdb:5V8F|rcsb pdb:6WGC|rcsb pdb:6WGG|rcsb pdb:6WGI|rcsb pdb:7MCA|reactome:R-SCE-68689|reactome:R-SCE-68949|reactome:R-SCE-68962|reactome:R-SCE-69017 - crc64:57A7A2B97A90DC6C crc64:13645F65BEAB5EE8 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:gYjsHsmOYQGGIVjiQ/ZH+BB9BCM559292 rogid:JR9a6JdKg9hu4gkYo3Df0KrSkis559292 intact-crc:ACDA29AC533E7F27|rigid:LBZ7EiTNyn6SRKrCOQo0OU3gLbs false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P04147 uniprotkb:P39936 intact:EBI-12823|ensemblfungi:YER165W|uniprotkb:D3DM73 intact:EBI-9006|ensemblfungi:YGL049C|uniprotkb:D6VU91 psi-mi:pabp_yeast(display_long)|uniprotkb:PAB1(gene name)|psi-mi:PAB1(display_short)|uniprotkb:ARS consensus-binding protein ACBP-67(gene name synonym)|uniprotkb:Polyadenylate tail-binding protein(gene name synonym)|uniprotkb:YER165W(locus name) psi-mi:if4f2_yeast(display_long)|uniprotkb:YGL049C(locus name)|uniprotkb:TIF4632(gene name)|psi-mi:TIF4632(display_short)|uniprotkb:eIF4G2(gene name synonym)|uniprotkb:mRNA cap-binding protein complex subunit p130(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472239|imex:IM-18537-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YER165W(gene)|go:"GO:0006446"(regulation of translational initiation)|go:"GO:0008143"("poly(A) binding")|ensemblfungi:YER165W_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006397"(mRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008428"(ribonuclease inhibitor activity)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0060211"("regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|rcsb pdb:1IFW|rcsb pdb:6R5K|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-156827|refseq:NP_011092.1|sgd:S000000967|mint:P04147|dip:DIP-2275N interpro:IPR036211|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-72662|reactome:R-SCE-72702|reactome:R-SCE-975956|reactome:R-SCE-975957|go:"GO:0016281"(eukaryotic translation initiation factor 4F complex)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0034063"(stress granule assembly)|go:"GO:1901195"(positive regulation of formation of translation preinitiation complex)|go:"GO:1902280"(regulation of RNA helicase activity)|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR022745|ensemblfungi:YGL049C(gene)|ensemblfungi:YGL049C_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003729"(mRNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|refseq:NP_011466.1|sgd:S000003017|mint:P39936|dip:DIP-330N - crc64:4F97E494753E17C7 crc64:BF5E9805CD47908E figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:6ZjESO1CUgykLdGVlTuZoFRwqyg559292 rogid:T8feENVEclKiN5joAyBJ2trBE0A559292 intact-crc:C1B90ACAF1DA90DD|rigid:VFLGfOwrR55gjtNsRvqX6t7v10o false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV6 uniprotkb:P05382 intact:EBI-6472250|ensemblbacteria:AAK75182 intact:EBI-2206997|ensemblbacteria:AAK74467 psi-mi:a0a0h2upv6_strpn(display_long)|uniprotkb:SP_1069(locus name) psi-mi:dhps_strpn(display_long)|uniprotkb:sulA(gene name)|psi-mi:sulA(display_short)|uniprotkb:Dihydropteroate pyrophosphorylase(gene name synonym)|uniprotkb:SP_0289(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472253|imex:IM-18537-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75182(transcript)|ensemblbacteria:SP_1069(gene)|rcsb pdb:3LFT|interpro:IPR007487(ABC transporter substrate binding protein)|interpro:IPR028082|uniprotkb:Q97QX5(uniprot-removed-ac) interpro:IPR006390(Dihydropteroate synthase)|interpro:IPR011005(Dihydropteroate synthase-like)|interpro:IPR000489(Dihydropteroate synthase, DHPS)|ensemblbacteria:AAK74467(transcript)|ensemblbacteria:SP_0289(gene)|go:"GO:0004156"(dihydropteroate synthase activity)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0046872"(metal ion binding) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tdS0lx8TPCRR0wSC8lyC158Ns2I170187 rogid:VGUM1bg8Uwmg+bQxMG5i4KGVM0k170187 intact-crc:EAB48CE1C2DB5C6D|rigid:/yCMgnKIwx5iHGceLdo89UH9f9o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P06787 uniprotkb:P32380 intact:EBI-3976|uniprotkb:D6VQA8|ensemblfungi:YBR109C intact:EBI-12369|ensemblfungi:YDR356W|uniprotkb:D6VSY5 psi-mi:calm_yeast(display_long)|uniprotkb:YBR0904(orf name)|uniprotkb:YBR109C(locus name)|uniprotkb:CMD1(gene name)|psi-mi:CMD1(display_short) psi-mi:sp110_yeast(display_long)|uniprotkb:NUF1(gene name synonym)|uniprotkb:SPC110(gene name)|psi-mi:SPC110(display_short)|uniprotkb:YDR356W(locus name)|uniprotkb:D9476.3(orf name)|uniprotkb:XCM1(gene name synonym)|uniprotkb:Extragenic suppressor of CMD1-1 mutant protein 1(gene name synonym)|uniprotkb:Nuclear filament-related protein 1(gene name synonym)|uniprotkb:Spindle pole body spacer protein SPC110(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472275|imex:IM-18537-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009667.1|sgd:S000000313|dip:DIP-536N|mint:P06787|ensemblfungi:YBR109C(gene)|ensemblfungi:YBR109C_mRNA(transcript)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000742"(karyogamy involved in conjugation with cellular fusion)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005823"(central plaque of spindle pole body)|go:"GO:0005933"(cellular bud)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006897"(endocytosis)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0007114"(cell budding)|go:"GO:0016237"(lysosomal microautophagy)|go:"GO:0019722"(calcium-mediated signaling)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0042144"(vacuole fusion, non-autophagic)|go:"GO:0043332"(mating projection tip)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0051019"(mitogen-activated protein kinase binding)|go:"GO:0051300"(spindle pole body organization)|go:"GO:1903525"(regulation of membrane tubulation)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR018247|interpro:IPR039030|rcsb pdb:1F54|rcsb pdb:1F55|rcsb pdb:1LKJ|rcsb pdb:2LHH|rcsb pdb:2LHI|rcsb pdb:6OQQ|reactome:R-SCE-111932|reactome:R-SCE-114608|reactome:R-SCE-1474151|reactome:R-SCE-203615|reactome:R-SCE-2871809|reactome:R-SCE-4086398|reactome:R-SCE-442729|reactome:R-SCE-5218920|reactome:R-SCE-5607763|reactome:R-SCE-5626467|reactome:R-SCE-6798695|reactome:R-SCE-9009391|reactome:R-SCE-9619229 sgd:S000002764|ensemblfungi:YDR356W(gene)|ensemblfungi:YDR356W_mRNA(transcript)|go:"GO:0000022"(mitotic spindle elongation)|go:"GO:0000742"(karyogamy involved in conjugation with cellular fusion)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005822"(inner plaque of spindle pole body)|go:"GO:0005823"(central plaque of spindle pole body)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0090063"(positive regulation of microtubule nucleation)|go:"GO:0110120"(gamma-tubulin complex localization to nuclear side of mitotic spindle pole body)|interpro:IPR040593|rcsb pdb:4DS7|rcsb pdb:7M2W|rcsb pdb:7M2X|rcsb pdb:7M2Y|go:"GO:1902440"(protein localization to mitotic spindle pole body)|refseq:NP_010643.3|mint:P32380|dip:DIP-702N - crc64:819ED1AD5D9400D3 crc64:04FAA074BB8A0BC8 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jyNQ4XuG4o2uZi6ztTIMCcgbQFM559292 rogid:FbhC86QRbeKKUOXntOgk8yWTEW4559292 intact-crc:6E5B932C8DBC23EA|rigid:jQMFY35K5//WyNZEn7GlKjvF+C8 false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV6 uniprotkb:P05382 intact:EBI-6472250|ensemblbacteria:AAK75182 intact:EBI-2206997|ensemblbacteria:AAK74467 psi-mi:a0a0h2upv6_strpn(display_long)|uniprotkb:SP_1069(locus name) psi-mi:dhps_strpn(display_long)|uniprotkb:sulA(gene name)|psi-mi:sulA(display_short)|uniprotkb:Dihydropteroate pyrophosphorylase(gene name synonym)|uniprotkb:SP_0289(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472264|imex:IM-18537-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75182(transcript)|ensemblbacteria:SP_1069(gene)|rcsb pdb:3LFT|interpro:IPR007487(ABC transporter substrate binding protein)|interpro:IPR028082|uniprotkb:Q97QX5(uniprot-removed-ac) interpro:IPR006390(Dihydropteroate synthase)|interpro:IPR011005(Dihydropteroate synthase-like)|interpro:IPR000489(Dihydropteroate synthase, DHPS)|ensemblbacteria:AAK74467(transcript)|ensemblbacteria:SP_0289(gene)|go:"GO:0004156"(dihydropteroate synthase activity)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0046872"(metal ion binding) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tdS0lx8TPCRR0wSC8lyC158Ns2I170187 rogid:VGUM1bg8Uwmg+bQxMG5i4KGVM0k170187 intact-crc:5746685A8664C719|rigid:/yCMgnKIwx5iHGceLdo89UH9f9o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P09798 uniprotkb:P53068 intact:EBI-4208|uniprotkb:D6VXR3|ensemblfungi:YKL022C intact:EBI-2603|uniprotkb:D6VV95|ensemblfungi:YGL240W psi-mi:cdc16_yeast(display_long)|uniprotkb:CDC16(gene name)|psi-mi:CDC16(display_short)|uniprotkb:YKL022C(locus name)|uniprotkb:Cell division control protein 16(gene name synonym) psi-mi:apc10_yeast(display_long)|uniprotkb:Destruction of cyclin B protein 1(gene name synonym)|uniprotkb:DOC1(gene name)|psi-mi:DOC1(display_short)|uniprotkb:APC10(gene name synonym)|uniprotkb:YGL240W(locus name)|uniprotkb:HRC283(orf name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472308|imex:IM-18537-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000001505|refseq:NP_012903.1|dip:DIP-25N|mint:P09798|ensemblfungi:YKL022C(gene)|ensemblfungi:YKL022C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005680"(anaphase-promoting complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0007091"(metaphase/anaphase transition of mitotic cell cycle)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031145"(anaphase-promoting complex-dependent catabolic process)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0045842"(positive regulation of mitotic metaphase/anaphase transition)|go:"GO:0051301"(cell division)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR013105(Tetratricopeptide TPR2)|interpro:IPR019734|reactome:R-SCE-983168 refseq:NP_011274.2|sgd:S000003209|dip:DIP-1128N|mint:P53068|ensemblfungi:YGL240W(gene)|ensemblfungi:YGL240W_mRNA(transcript)|go:"GO:0005680"(anaphase-promoting complex)|go:"GO:0005739"(mitochondrion)|go:"GO:0007049"(cell cycle)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031145"(anaphase-promoting complex-dependent catabolic process)|go:"GO:0031497"(chromatin assembly)|go:"GO:0051301"(cell division)|go:"GO:0070979"(protein K11-linked ubiquitination)|go:"GO:1904668"(positive regulation of ubiquitin protein ligase activity)|interpro:IPR004939(Anaphase-promoting complex, subunit 10)|interpro:IPR008979(Galactose-binding like)|interpro:IPR016901(Anaphase-promoting complex, subunit 10, subgroup)|rcsb pdb:1GQP|reactome:R-SCE-983168 - crc64:A096B34441083488 crc64:F3C58B1BB986442D figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:LyHljNjHiYEyURUpwUDvn41M8xo559292 rogid:6xjJ6a7poipPz2UFOwtEp8HwtUA559292 intact-crc:97E5198055F2EEC3|rigid:6Cn+RLWVy7A7mElPzeF1176fNco false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P13393 uniprotkb:P32774 intact:EBI-19129|uniprotkb:D3DM55|ensemblfungi:YER148W intact:EBI-19323|uniprotkb:D6VXM9|ensemblfungi:YKL058W psi-mi:tbp_yeast(display_long)|uniprotkb:YER148W(locus name)|uniprotkb:SPT15(gene name)|psi-mi:SPT15(display_short)|uniprotkb:BTF1(gene name synonym)|uniprotkb:TBP1(gene name synonym)|uniprotkb:TATA-box factor(gene name synonym)|uniprotkb:TATA-binding factor(gene name synonym)|uniprotkb:TATA sequence-binding protein(gene name synonym)|uniprotkb:Transcription factor D(gene name synonym)|uniprotkb:Transcription initiation factor TFIID TBP subunit(gene name synonym) psi-mi:t2ag_yeast(display_long)|uniprotkb:YKL058W(locus name)|uniprotkb:TOA2(gene name)|psi-mi:TOA2(display_short)|uniprotkb:TFIIA 13.5 kDa subunit(gene name synonym)|uniprotkb:General transcription factor IIA subunit 2(gene name synonym)|uniprotkb:Transcription initiation factor IIA small chain(gene name synonym)|uniprotkb:Transcription initiation factor IIA small subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472319|imex:IM-18537-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000950|ensemblfungi:YER148W(gene)|ensemblfungi:YER148W_mRNA(transcript)|go:"GO:0000126"(transcription factor TFIIIB complex)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0000995"(RNA polymerase III general transcription initiation factor activity)|go:"GO:0001016"(RNA polymerase III transcription regulatory region sequence-specific DNA binding)|go:"GO:0001092"(TFIIA-class transcription factor complex binding)|go:"GO:0001179"(RNA polymerase I general transcription initiation factor binding)|go:"GO:0001188"(RNA polymerase I preinitiation complex assembly)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005672"(transcription factor TFIIA complex)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0008301"(DNA binding, bending)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070893"(transposon integration)|go:"GO:0070898"(RNA polymerase III preinitiation complex assembly)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0140223"(general transcription initiation factor activity)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR000814(TATA-box binding)|interpro:IPR012295(Beta2-adaptin/TATA-box binding, C-terminal)|interpro:IPR030491|interpro:IPR033710|rcsb pdb:1NGM|rcsb pdb:1NH2|rcsb pdb:1RM1|rcsb pdb:1TBA|rcsb pdb:1TBP|rcsb pdb:1YTB|rcsb pdb:1YTF|rcsb pdb:4B0A|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5SVA|rcsb pdb:6CNB|rcsb pdb:6CNC|rcsb pdb:6CND|rcsb pdb:6CNF|rcsb pdb:6E16|rcsb pdb:6E24|rcsb pdb:6EU0|rcsb pdb:6F40|rcsb pdb:6F41|rcsb pdb:6F42|rcsb pdb:6F44|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6TBM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|reactome:R-SCE-76061|reactome:R-SCE-76066|reactome:R-SCE-9018519|refseq:NP_011075.3|dip:DIP-44N|mint:P13393 refseq:NP_012865.1|sgd:S000001541|ensemblfungi:YKL058W(gene)|ensemblfungi:YKL058W_mRNA(transcript)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005672"(transcription factor TFIIA complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|interpro:IPR003194(Transcription initiation factor IIA, gamma subunit)|interpro:IPR009083(Transcription factor IIA, helical)|interpro:IPR009088(Transcription factor IIA, beta-barrel)|interpro:IPR015871(Transcription initiation factor IIA, gamma subunit, C-terminal)|interpro:IPR015872(Transcription initiation factor IIA, gamma subunit, N-terminal)|rcsb pdb:1NH2|rcsb pdb:1RM1|rcsb pdb:1YTF|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5SVA|rcsb pdb:6GYK|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|reactome:R-SCE-9018519|rcsb pdb:6GYL|dip:DIP-2348N|mint:P32774 - crc64:50365FFF1D3718CE - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:fVZPztzKW8tuxDYYpZ7ZTFlq3Do559292 rogid:VhnV5wPU9U0wezVTAgcxZa9CZjQ559292 intact-crc:76C70B4F0E76C729|rigid:4rRZdNZOahaCuUrvh+hWQsyXV/I false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P07834 uniprotkb:P52286 intact:EBI-4434|ensemblfungi:YFL009W|uniprotkb:D6VTM1 intact:EBI-4090|uniprotkb:Q07186|uniprotkb:D6VSW0|ensemblfungi:YDR328C psi-mi:cdc4_yeast(display_long)|uniprotkb:CDC4(gene name)|psi-mi:CDC4(display_short)|uniprotkb:YFL009W(locus name)|uniprotkb:F-box protein CDC4(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC4(gene name synonym) psi-mi:skp1_yeast(display_long)|uniprotkb:SKP1(gene name)|psi-mi:SKP1(display_short)|uniprotkb:CBF3D(gene name synonym)|uniprotkb:YDR328C(locus name)|uniprotkb:D9798.14(orf name)|uniprotkb:Centromere DNA-binding protein complex CBF3 subunit D(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit SKP1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472286|imex:IM-18537-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-SCE-174113|reactome:R-SCE-8951664|reactome:R-SCE-983168|ensemblfungi:YFL009W(gene)|ensemblfungi:YFL009W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030435"(sporulation resulting in formation of a cellular spore)|go:"GO:0030686"(90S preribosome)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0043130"(ubiquitin binding)|refseq:NP_116585.1|sgd:S000001885|dip:DIP-1625N|go:"GO:0043224"(nuclear SCF ubiquitin ligase complex)|go:"GO:0050815"(phosphoserine residue binding)|go:"GO:0051301"(cell division)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR001680(WD40 repeat)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR031740|interpro:IPR036047|interpro:IPR036322|rcsb pdb:1NEX|rcsb pdb:2P63|rcsb pdb:3MKS|rcsb pdb:3V7D sgd:S000002736|refseq:NP_010615.3|dip:DIP-1236N|mint:P52286|ensemblfungi:YDR328C(gene)|ensemblfungi:YDR328C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000776"(kinetochore)|go:"GO:0000921"(septin ring assembly)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0010458"(exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031518"(CBF3 complex)|go:"GO:0034622"|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043291"(RAVE complex)|go:"GO:0045116"(protein neddylation)|go:"GO:0051382"(kinetochore assembly)|go:"GO:0097602"(cullin family protein binding)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:1NEX|rcsb pdb:3MKS|rcsb pdb:3V7D|rcsb pdb:5AN3|rcsb pdb:6F07|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79|reactome:R-SCE-174113|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:0348F2F8FA78F3BC crc64:746DDE6470A69432 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KUKB7HDw6k4t7Gb1pDGW8P5J1kw559292 rogid:HO5Uz+KzzWNBubxoXRDNTVi8eIA559292 intact-crc:D2A9C273798EB563|rigid:UqB03WVcGngprAjLKNB09ZbwMAE false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P00546 uniprotkb:P09119 intact:EBI-4253|uniprotkb:D6VQF5|ensemblfungi:YBR160W intact:EBI-4447|uniprotkb:D6VVZ7|ensemblfungi:YJL194W psi-mi:cdk1_yeast(display_long)|uniprotkb:CDC28(gene name)|psi-mi:CDC28(display_short)|uniprotkb:CDK1(gene name synonym)|uniprotkb:HSL5(gene name synonym)|uniprotkb:SRM5(gene name synonym)|uniprotkb:YBR1211(orf name)|uniprotkb:YBR160W(locus name)|uniprotkb:Cell division control protein 28(gene name synonym)|uniprotkb:Cell division protein kinase 1(gene name synonym) psi-mi:cdc6_yeast(display_long)|uniprotkb:CDC6(gene name)|psi-mi:CDC6(display_short)|uniprotkb:J0347(orf name)|uniprotkb:YJL194W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472297|imex:IM-18537-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000364|refseq:NP_009718.3|dip:DIP-1039N|mint:P00546|ensemblfungi:YBR160W(gene)|ensemblfungi:YBR160W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000307"(cyclin-dependent protein kinase holoenzyme complex)|go:"GO:0000706"(meiotic DNA double-strand break processing)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000729"(DNA double-strand break processing)|go:"GO:0000993"(RNA polymerase II complex binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004693"(cyclin-dependent protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006370"(7-methylguanosine mRNA capping)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0006892"(post-Golgi vesicle-mediated transport)|go:"GO:0007130"(synaptonemal complex assembly)|go:"GO:0007165"(signal transduction)|go:"GO:0010389"(regulation of G2/M transition of mitotic cell cycle)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010568"(regulation of budding cell apical bud growth)|go:"GO:0010570"(regulation of filamentous growth)|go:"GO:0010571"(positive regulation of nuclear cell cycle DNA replication)|go:"GO:0010696"(positive regulation of mitotic spindle pole body separation)|go:"GO:0010898"(positive regulation of triglyceride catabolic process)|go:"GO:0018105"(peptidyl-serine phosphorylation)|go:"GO:0018107"(peptidyl-threonine phosphorylation)|go:"GO:0030332"(cyclin binding)|go:"GO:0032210"(regulation of telomere maintenance via telomerase)|go:"GO:0034504"(protein localization to nucleus)|go:"GO:0042393"(histone binding)|go:"GO:0044257"(cellular protein catabolic process)|go:"GO:0045819"(positive regulation of glycogen catabolic process)|go:"GO:0045875"(negative regulation of sister chromatid cohesion)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045930"(negative regulation of mitotic cell cycle)|go:"GO:0045931"(positive regulation of mitotic cell cycle)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051301"(cell division)|go:"GO:0051446"(positive regulation of meiotic cell cycle)|go:"GO:0051447"(negative regulation of meiotic cell cycle)|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070816"(phosphorylation of RNA polymerase II C-terminal domain)|go:"GO:0090169"(regulation of spindle assembly)|go:"GO:0090307"(mitotic spindle assembly)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|go:"GO:1901319"(positive regulation of trehalose catabolic process)|go:"GO:1902596"(negative regulation of DNA replication origin binding)|go:"GO:1902889"(protein localization to spindle microtubule)|go:"GO:1903500"(negative regulation of mitotic actomyosin contractile ring assembly)|go:"GO:1903827"|go:"GO:1904291"(positive regulation of mitotic DNA damage checkpoint)|go:"GO:1905168"(positive regulation of double-strand break repair via homologous recombination)|go:"GO:1905634"(regulation of protein localization to chromatin)|go:"GO:1990139"(protein localization to nuclear periphery)|go:"GO:1990758"(mitotic sister chromatid biorientation)|go:"GO:2001033"(negative regulation of double-strand break repair via nonhomologous end joining)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-68949|reactome:R-SCE-68962|reactome:R-SCE-69017|reactome:R-SCE-69202|reactome:R-SCE-69656 refseq:NP_012341.1|sgd:S000003730|mint:P09119|dip:DIP-2267N|ensemblfungi:YJL194W(gene)|ensemblfungi:YJL194W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0003682"(chromatin binding)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0003924"(GTPase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|go:"GO:0031261"(DNA replication preinitiation complex)|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0033314"(mitotic DNA replication checkpoint signaling)|go:"GO:0051301"(cell division)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR015163(CDC6, C terminal)|interpro:IPR016314(Cell division control, Cdc6)|interpro:IPR027417|interpro:IPR036388|interpro:IPR036390|rcsb pdb:5V8F|rcsb pdb:6WGC|rcsb pdb:6WGG|rcsb pdb:6WGI|rcsb pdb:7MCA|reactome:R-SCE-68689|reactome:R-SCE-68949|reactome:R-SCE-68962|reactome:R-SCE-69017 - crc64:57A7A2B97A90DC6C crc64:13645F65BEAB5EE8 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:gYjsHsmOYQGGIVjiQ/ZH+BB9BCM559292 rogid:JR9a6JdKg9hu4gkYo3Df0KrSkis559292 intact-crc:4440AD6411505F85|rigid:LBZ7EiTNyn6SRKrCOQo0OU3gLbs false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12499 uniprotkb:P15646 intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472341|imex:IM-18537-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - crc64:8A2889448B2A19E2 crc64:56A8B958A7B6066E figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 intact-crc:C28DAA274BB1C031|rigid:CzuZFSvnqxLvqFMcpK6yC+3WZBg false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P13574 uniprotkb:P14681 intact:EBI-18264|uniprotkb:D3DL35|ensemblfungi:YHR084W intact:EBI-9945|uniprotkb:Q45U43|uniprotkb:D6VUH8|ensemblfungi:YGR040W psi-mi:ste12_yeast(display_long)|uniprotkb:STE12(gene name)|psi-mi:STE12(display_short)|uniprotkb:YHR084W(locus name) psi-mi:kss1_yeast(display_long)|uniprotkb:KSS1(gene name)|psi-mi:KSS1(display_short)|uniprotkb:Kinase suppressor of SST2(gene name synonym)|uniprotkb:YGR040W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472330|imex:IM-18537-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011952.1|sgd:S000001126|go:"GO:0007329"(positive regulation of transcription from RNA polymerase II promoter by pheromones)|go:"GO:0019953"(sexual reproduction)|go:"GO:0046020"(negative regulation of transcription from RNA polymerase II promoter by pheromones)|go:"GO:1990526"(Ste12p-Dig1p-Dig2p complex)|go:"GO:1990527"(Tec1p-Ste12p-Dig1p complex)|go:"GO:2000220"(regulation of pseudohyphal growth)|interpro:IPR003120(Transcription factor, STE-like)|rcsb pdb:3W3W|ensemblfungi:YHR084W(gene)|ensemblfungi:YHR084W_mRNA(transcript)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0007124"(pseudohyphal growth)|dip:DIP-64N|mint:P13574 sgd:S000003272|ensemblfungi:YGR040W(gene)|ensemblfungi:YGR040W_mRNA(transcript)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001402"(signal transduction involved in filamentous growth)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0008134"(transcription factor binding)|go:"GO:0010973"(positive regulation of division septum assembly)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042597"(periplasmic space)|go:"GO:0043433"(negative regulation of DNA-binding transcription factor activity)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|reactome:R-SCE-111995|reactome:R-SCE-112411|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-375165|reactome:R-SCE-437239|reactome:R-SCE-5687128|reactome:R-SCE-6798695|reactome:R-SCE-881907|reactome:R-SCE-9634635|refseq:NP_011554.3|reactome:R-SCE-112409|reactome:R-SCE-3371453|reactome:R-SCE-445144|reactome:R-SCE-5673001|reactome:R-SCE-5674135|reactome:R-SCE-5674499|dip:DIP-60N|reactome:R-SCE-170968|reactome:R-SCE-450341 - crc64:EE7371F18BBC0337 crc64:5FA42161B5FD51B5 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:MdXJ5MVLjUEpzwQv3mhihuiFPbQ559292 rogid:xE1y1jku+iWy4xzv9wUCul1AFZs559292 intact-crc:D55150D78C0FF1B1|rigid:FPEe6ck3zlZVNkRB/TTYpAfOZIw false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P17555 uniprotkb:P15891 intact:EBI-4024|uniprotkb:D6W144|ensemblfungi:YNL138W intact:EBI-2036|uniprotkb:D6VR88|ensemblfungi:YCR088W psi-mi:cap_yeast(display_long)|uniprotkb:SRV2(gene name)|psi-mi:SRV2(display_short)|uniprotkb:CAP1(gene name synonym)|uniprotkb:YNL138W(locus name)|uniprotkb:N1210(orf name)|uniprotkb:N1838(orf name) psi-mi:abp1_yeast(display_long)|uniprotkb:ABP1(gene name)|psi-mi:ABP1(display_short)|uniprotkb:YCR88W(orf name)|uniprotkb:YCR088W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472352|imex:IM-18537-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014261.1|sgd:S000005082|dip:DIP-77N|ensemblfungi:YNL138W(gene)|ensemblfungi:YNL138W_mRNA(transcript)|go:"GO:0000902"(cell morphogenesis)|go:"GO:0003779"(actin binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007015"(actin filament organization)|go:"GO:0007265"(Ras protein signal transduction)|mint:P17555|go:"GO:0008179"(adenylate cyclase binding)|go:"GO:0019933"(cAMP-mediated signaling)|go:"GO:0030042"(actin filament depolymerization)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0030836"(positive regulation of actin filament depolymerization)|go:"GO:0042802"(identical protein binding)|go:"GO:0043332"(mating projection tip)|go:"GO:0045761"(regulation of adenylate cyclase activity)|go:"GO:0051014"(actin filament severing)|go:"GO:0090141"(positive regulation of mitochondrial fission)|interpro:IPR001837(Adenylate cyclase-associated CAP)|interpro:IPR006599(CARP motif)|interpro:IPR013912(Adenylate cyclase-associated CAP, C-terminal)|interpro:IPR013992(Adenylate cyclase-associated CAP, N-terminal)|interpro:IPR016098(Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal)|interpro:IPR017901|interpro:IPR018106|interpro:IPR028417|interpro:IPR028419|interpro:IPR036222|interpro:IPR036223|rcsb pdb:1K4Z|rcsb pdb:1KQ5|reactome:R-SCE-6798695 sgd:S000000684|refseq:NP_010012.1|dip:DIP-534N|mint:P15891|ensemblfungi:YCR088W(gene)|ensemblfungi:YCR088W_mRNA(transcript)|go:"GO:0000147"(actin cortical patch assembly)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0030427"(site of polarized growth)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0043332"(mating projection tip)|go:"GO:0044379"(protein localization to actin cortical patch)|go:"GO:0051015"(actin filament binding)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR001452(Src homology-3)|interpro:IPR002108(Actin-binding, cofilin/tropomyosin type)|interpro:IPR029006|interpro:IPR035718|interpro:IPR036028|rcsb pdb:1HQZ|rcsb pdb:1JO8|rcsb pdb:2K3B|rcsb pdb:2RPN|reactome:R-SCE-6798695|reactome:R-SCE-8856828|reactome:R-SCE-9013405 - crc64:0EB4D41205E2D464 crc64:39523510704D94AA figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:3Fs9g+L5RnbkqYThVpOvSFrZoJ8559292 rogid:GNPpMO8tuHFODmA3UzxSuTpdqZY559292 intact-crc:791279FE5D4BABA4|rigid:VJjZzzs1N/6MQXdPKdjAV6J+0AI false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P16892 uniprotkb:P32830 intact:EBI-7193|uniprotkb:D6VPY4|ensemblfungi:YBL016W intact:EBI-11303|uniprotkb:D6VQ92|ensemblfungi:YBR091C psi-mi:fus3_yeast(display_long)|uniprotkb:FUS3(gene name)|psi-mi:FUS3(display_short)|uniprotkb:DAC2(gene name synonym)|uniprotkb:YBL016W(locus name)|uniprotkb:YBL0303(orf name)|uniprotkb:YBL03.21(orf name) psi-mi:tim12_yeast(display_long)|uniprotkb:TIM12(gene name)|psi-mi:TIM12(display_short)|uniprotkb:Mitochondrial regulator of splicing 5(gene name synonym)|uniprotkb:MRS5(gene name synonym)|uniprotkb:YBR0812(orf name)|uniprotkb:YBR091C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472374|imex:IM-18537-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009537.1|sgd:S000000112|dip:DIP-714N|mint:P16892|ensemblfungi:YBL016W(gene)|ensemblfungi:YBL016W_mRNA(transcript)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042597"(periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0043332"(mating projection tip)|go:"GO:0043409"(negative regulation of MAPK cascade)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0046827"(positive regulation of protein export from nucleus)|go:"GO:0051301"(cell division)|go:"GO:0071507"(pheromone response MAPK cascade)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:2B9F|rcsb pdb:2B9H|rcsb pdb:2B9I|rcsb pdb:2B9J|rcsb pdb:2F49|rcsb pdb:2F9G|rcsb pdb:2FA2|reactome:R-SCE-110056|reactome:R-SCE-111995|reactome:R-SCE-112409|reactome:R-SCE-112411|reactome:R-SCE-170968|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-3371453|reactome:R-SCE-375165|reactome:R-SCE-437239|reactome:R-SCE-445144|reactome:R-SCE-450341|reactome:R-SCE-5673001|reactome:R-SCE-5674135|reactome:R-SCE-5674499|reactome:R-SCE-5687128|reactome:R-SCE-6798695|reactome:R-SCE-881907|reactome:R-SCE-9634635 ensemblfungi:YBR091C(gene)|ensemblfungi:YBR091C_mRNA(transcript)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0042721"(TIM22 mitochondrial import inner membrane insertion complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0071806"(protein transmembrane transport)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027102|interpro:IPR035427|rcsb pdb:6LO8|go:"GO:0005758"(mitochondrial intermembrane space)|refseq:NP_009649.1|sgd:S000000295|dip:DIP-1140N - crc64:5117980D20A1E7E2 crc64:2C4B7DEE9695866D figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:FaPNQ+7PYnYCFIVspwEcRFOgv0w559292 rogid:3ABFY/s+od9+IAzJ30g58aElg5s559292 intact-crc:285A3E183713D17A|rigid:EAbmIirKsMUPY0UhAbTmLem6YCY false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P19073 uniprotkb:Q03497 intact:EBI-4274|uniprotkb:Q05978|uniprotkb:D6VYN1|ensemblfungi:YLR229C intact:EBI-18285|uniprotkb:D3DKQ8|ensemblfungi:YHL007C psi-mi:cdc42_yeast(display_long)|uniprotkb:CDC42(gene name)|psi-mi:CDC42(display_short)|uniprotkb:SRO2(gene name synonym)|uniprotkb:YLR229C(locus name)|uniprotkb:L8083.13(orf name)|uniprotkb:Suppressor of RHO3 protein 2(gene name synonym) psi-mi:ste20_yeast(display_long)|uniprotkb:STE20(gene name)|psi-mi:STE20(display_short)|uniprotkb:YHL007C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472385|imex:IM-18537-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-862N|refseq:NP_013330.1|sgd:S000004219|mint:P19073|ensemblfungi:YLR229C(gene)|ensemblfungi:YLR229C_mRNA(transcript)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005940"(septin ring)|go:"GO:0006897"(endocytosis)|go:"GO:0007049"(cell cycle)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0007118"(budding cell apical bud growth)|go:"GO:0007119"(budding cell isotropic bud growth)|go:"GO:0007266"(Rho protein signal transduction)|go:"GO:0022604"(regulation of cell morphogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030031"(cell projection assembly)|go:"GO:0031106"(septin ring organization)|go:"GO:0031384"(regulation of initiation of mating projection growth)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032488"(Cdc42 protein signal transduction)|go:"GO:0032889"(regulation of vacuole fusion, non-autophagic)|go:"GO:0043332"(mating projection tip)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0060178"(regulation of exocyst localization)|go:"GO:0071944"(cell periphery)|go:"GO:2000222"(positive regulation of pseudohyphal growth)|interpro:IPR001806(Ras GTPase)|interpro:IPR003578(Ras small GTPase, Rho type)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037874|reactome:R-SCE-2029482|reactome:R-SCE-389359|reactome:R-SCE-5626467|reactome:R-SCE-5627123|reactome:R-SCE-5687128|reactome:R-SCE-9013148|reactome:R-SCE-9013406|reactome:R-SCE-9013409|reactome:R-SCE-983231 refseq:NP_011856.1|sgd:S000000999|ensemblfungi:YHL007C(gene)|ensemblfungi:YHL007C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000282"(cellular bud site selection)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001402"(signal transduction involved in filamentous growth)|reactome:R-SCE-389359|interpro:IPR036936|reactome:R-SCE-5627123|reactome:R-SCE-5687128|reactome:R-SCE-9013405|reactome:R-SCE-9013406|rcsb pdb:2KYM|rcsb pdb:2LCS|rcsb pdb:2RQW|reactome:R-SCE-2029482|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003729"(mRNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0007118"(budding cell apical bud growth)|go:"GO:0007121"(bipolar cellular bud site selection)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0007232"(osmosensory signaling pathway via Sho1 osmosensor)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0019899"(enzyme binding)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0035376"(sterol import)|go:"GO:0035404"(histone-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043332"(mating projection tip)|go:"GO:0043408"(regulation of MAPK cascade)|go:"GO:0044025"("histone kinase activity (H2B-S14 specific)")|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR033923|dip:DIP-712N|mint:Q03497 - crc64:30BD644BA9836B2C crc64:69C1C12F5B87733C figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:4FDrNURFjSZOYUFf/dADXTpoMTc559292 rogid:ammX6PwJCeyVjNxJ2UJUBrZt9mM559292 intact-crc:C1E05E3E3D0E2E36|rigid:7L3BdeqLSKwAstxYPP8TnThrHa4 false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P20604 uniprotkb:Q04372 intact:EBI-13707|uniprotkb:D6VRU8|ensemblfungi:YDL047W intact:EBI-18926|uniprotkb:Q05039|uniprotkb:D6VZK2|ensemblfungi:YMR028W psi-mi:pp11_yeast(display_long)|uniprotkb:SIT4(gene name)|psi-mi:SIT4(display_short)|uniprotkb:PPH1(gene name synonym)|uniprotkb:YDL047W(locus name)|uniprotkb:D2693(orf name) psi-mi:tap42_yeast(display_long)|uniprotkb:YM9711.18(orf name)|uniprotkb:YM9973.01C(orf name)|uniprotkb:YMR028W(locus name)|uniprotkb:TAP42(gene name)|psi-mi:TAP42(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472396|imex:IM-18537-21 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010236.1|sgd:S000002205|ensemblfungi:YDL047W(gene)|ensemblfungi:YDL047W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000159"(protein phosphatase type 2A complex)|go:"GO:0002098"(tRNA wobble uridine modification)|go:"GO:0051301"(cell division)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-204005|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0016311"(dephosphorylation)|go:"GO:0031929"(TOR signaling)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|mint:P20604|dip:DIP-5850N ensemblfungi:YMR028W(gene)|ensemblfungi:YMR028W_mRNA(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0009968"(negative regulation of signal transduction)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031929"(TOR signaling)|go:"GO:0035303"(regulation of dephosphorylation)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0051721"(protein phosphatase 2A binding)|interpro:IPR007304(TAP42-like protein)|interpro:IPR038511|rcsb pdb:2V0P|refseq:NP_013741.1|sgd:S000004630|dip:DIP-6380N|mint:Q04372 - crc64:AF52BC65E4E715EC crc64:16F1E236BEC696DD figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Up3F/fGsTK1vYjho+dJ/TDVIEM0559292 rogid:FPTKyL4WGNJLs17yL7h6bEzz4vI559292 intact-crc:04A29CDCD2E22AD2|rigid:77s6xt8ySouByDYISJJ1417mAJs false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P15891 uniprotkb:P39743 intact:EBI-2036|uniprotkb:D6VR88|ensemblfungi:YCR088W intact:EBI-14500|uniprotkb:D6VT22|ensemblfungi:YDR388W psi-mi:abp1_yeast(display_long)|uniprotkb:ABP1(gene name)|psi-mi:ABP1(display_short)|uniprotkb:YCR88W(orf name)|uniprotkb:YCR088W(locus name) psi-mi:rv167_yeast(display_long)|uniprotkb:D9509.8(orf name)|uniprotkb:YDR388W(locus name)|uniprotkb:RVS167(gene name)|psi-mi:RVS167(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472363|imex:IM-18537-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000684|refseq:NP_010012.1|dip:DIP-534N|mint:P15891|ensemblfungi:YCR088W(gene)|ensemblfungi:YCR088W_mRNA(transcript)|go:"GO:0000147"(actin cortical patch assembly)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0030427"(site of polarized growth)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0043332"(mating projection tip)|go:"GO:0044379"(protein localization to actin cortical patch)|go:"GO:0051015"(actin filament binding)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR001452(Src homology-3)|interpro:IPR002108(Actin-binding, cofilin/tropomyosin type)|interpro:IPR029006|interpro:IPR035718|interpro:IPR036028|rcsb pdb:1HQZ|rcsb pdb:1JO8|rcsb pdb:2K3B|rcsb pdb:2RPN|reactome:R-SCE-6798695|reactome:R-SCE-8856828|reactome:R-SCE-9013405 ensemblfungi:YDR388W(gene)|ensemblfungi:YDR388W_mRNA(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0006897"(endocytosis)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031097"(medial cortex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043332"(mating projection tip)|go:"GO:0051666"(actin cortical patch localization)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0072741"(protein localization to cell division site)|go:"GO:0097320"(plasma membrane tubulation)|go:"GO:1903475"(mitotic actomyosin contractile ring assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR004148(BAR)|interpro:IPR027267|interpro:IPR036028|go:"GO:1990528"(Rvs161p-Rvs167p complex)|refseq:NP_010676.1|sgd:S000002796|mint:P39743|dip:DIP-770N - crc64:39523510704D94AA crc64:3F0AB53EBCC95A5B figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:GNPpMO8tuHFODmA3UzxSuTpdqZY559292 rogid:w3CZzhpvanHbodoFFlzkAHnsQyA559292 intact-crc:3A2E149C65BCBC2E|rigid:7gMBVrNqMbgO/xYVlYy4SbGxCfo false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P24814 uniprotkb:Q12018 intact:EBI-7898|uniprotkb:D6VWQ8|ensemblfungi:YJR090C intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 psi-mi:grr1_yeast(display_long)|uniprotkb:GRR1(gene name)|psi-mi:GRR1(display_short)|uniprotkb:CAT80(gene name synonym)|uniprotkb:COT2(gene name synonym)|uniprotkb:YJR090C(locus name)|uniprotkb:J1885(orf name)|uniprotkb:F-box and leucine-rich repeat protein GRR1(gene name synonym)|uniprotkb:F-box/LRR-repeat protein GRR1(gene name synonym) psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472407|imex:IM-18537-22 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012623.1|sgd:S000003850|mint:P24814|dip:DIP-1626N|ensemblfungi:YJR090C(gene)|ensemblfungi:YJR090C_mRNA(transcript)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000751"(mitotic cell cycle G1 arrest in response to pheromone)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0016020"(membrane)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0071406"(cellular response to methylmercury)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR006553(Leucine-rich repeat, cysteine-containing subtype)|interpro:IPR032675|reactome:R-SCE-163210|reactome:R-SCE-8949613 dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:6BB6C46611E6F825 crc64:22BC8B35034EDDEF figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:0s/WFupjCQeASvFVM+A9mSskzXY559292 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 intact-crc:7C86A4D5012E9E1B|rigid:WdTCMOj7SDtbKPIfNKkYGRg4HHc false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P25632 uniprotkb:P43609 intact:EBI-21941|uniprotkb:D6VR60|ensemblfungi:YCR052W intact:EBI-23005|uniprotkb:Q6B289|uniprotkb:D6VTS0|ensemblfungi:YFR037C psi-mi:rsc6_yeast(display_long)|uniprotkb:YCR052W(locus name)|uniprotkb:Remodel the structure of chromatin complex subunit 6(gene name synonym)|uniprotkb:RSC6(gene name)|psi-mi:RSC6(display_short)|uniprotkb:YCR52W(orf name) psi-mi:rsc8_yeast(display_long)|uniprotkb:RSC8(gene name)|psi-mi:RSC8(display_short)|uniprotkb:YFR037C(locus name)|uniprotkb:SWH3(gene name synonym)|uniprotkb:Remodel the structure of chromatin complex subunit 8(gene name synonym)|uniprotkb:SWI3 homolog(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472418|imex:IM-18537-23 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009981.1|sgd:S000000648|ensemblfungi:YCR052W(gene)|ensemblfungi:YCR052W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR036885|rcsb pdb:6K15|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|mint:P25632|dip:DIP-4999N|rcsb pdb:6TDA|rcsb pdb:6V8O|rcsb pdb:6V92|reactome:R-SCE-3214858 sgd:S000001933|refseq:NP_116695.3|dip:DIP-1478N|mint:P43609|interpro:IPR041984|interpro:IPR043145|rcsb pdb:6K15|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6V8O|rcsb pdb:6V92|reactome:R-SCE-3214858|ensemblfungi:YFR037C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|ensemblfungi:YFR037C(gene)|interpro:IPR032451|interpro:IPR036388 - crc64:6A9998BDBC4D24B2 crc64:D3D3120397CF0058 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:g3TbXsv1xKx+qR1OztQABvrHpWk559292 rogid:KpjkVJpv/5nqhpXBAhQZ3CzUr9k559292 intact-crc:674886A33C780DCB|rigid:S3+ZBvv9VtrrycynNcxZjWDIpNg false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P06787 uniprotkb:P32380 intact:EBI-3976|uniprotkb:D6VQA8|ensemblfungi:YBR109C intact:EBI-12369|ensemblfungi:YDR356W|uniprotkb:D6VSY5 psi-mi:calm_yeast(display_long)|uniprotkb:YBR0904(orf name)|uniprotkb:YBR109C(locus name)|uniprotkb:CMD1(gene name)|psi-mi:CMD1(display_short) psi-mi:sp110_yeast(display_long)|uniprotkb:NUF1(gene name synonym)|uniprotkb:SPC110(gene name)|psi-mi:SPC110(display_short)|uniprotkb:YDR356W(locus name)|uniprotkb:D9476.3(orf name)|uniprotkb:XCM1(gene name synonym)|uniprotkb:Extragenic suppressor of CMD1-1 mutant protein 1(gene name synonym)|uniprotkb:Nuclear filament-related protein 1(gene name synonym)|uniprotkb:Spindle pole body spacer protein SPC110(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472440|imex:IM-18537-25 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009667.1|sgd:S000000313|dip:DIP-536N|mint:P06787|ensemblfungi:YBR109C(gene)|ensemblfungi:YBR109C_mRNA(transcript)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000742"(karyogamy involved in conjugation with cellular fusion)|go:"GO:0005509"(calcium ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005823"(central plaque of spindle pole body)|go:"GO:0005933"(cellular bud)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006661"(phosphatidylinositol biosynthetic process)|go:"GO:0006897"(endocytosis)|go:"GO:0006898"(receptor-mediated endocytosis)|go:"GO:0007010"(cytoskeleton organization)|go:"GO:0007114"(cell budding)|go:"GO:0016237"(lysosomal microautophagy)|go:"GO:0019722"(calcium-mediated signaling)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0042144"(vacuole fusion, non-autophagic)|go:"GO:0043332"(mating projection tip)|go:"GO:0048306"(calcium-dependent protein binding)|go:"GO:0051019"(mitogen-activated protein kinase binding)|go:"GO:0051300"(spindle pole body organization)|go:"GO:1903525"(regulation of membrane tubulation)|interpro:IPR002048(Calcium-binding EF-hand)|interpro:IPR011992(EF-Hand type)|interpro:IPR018247|interpro:IPR039030|rcsb pdb:1F54|rcsb pdb:1F55|rcsb pdb:1LKJ|rcsb pdb:2LHH|rcsb pdb:2LHI|rcsb pdb:6OQQ|reactome:R-SCE-111932|reactome:R-SCE-114608|reactome:R-SCE-1474151|reactome:R-SCE-203615|reactome:R-SCE-2871809|reactome:R-SCE-4086398|reactome:R-SCE-442729|reactome:R-SCE-5218920|reactome:R-SCE-5607763|reactome:R-SCE-5626467|reactome:R-SCE-6798695|reactome:R-SCE-9009391|reactome:R-SCE-9619229 sgd:S000002764|ensemblfungi:YDR356W(gene)|ensemblfungi:YDR356W_mRNA(transcript)|go:"GO:0000022"(mitotic spindle elongation)|go:"GO:0000742"(karyogamy involved in conjugation with cellular fusion)|go:"GO:0005200"(structural constituent of cytoskeleton)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005822"(inner plaque of spindle pole body)|go:"GO:0005823"(central plaque of spindle pole body)|go:"GO:0044877"(protein-containing complex binding)|go:"GO:0065003"(protein-containing complex assembly)|go:"GO:0090063"(positive regulation of microtubule nucleation)|go:"GO:0110120"(gamma-tubulin complex localization to nuclear side of mitotic spindle pole body)|interpro:IPR040593|rcsb pdb:4DS7|rcsb pdb:7M2W|rcsb pdb:7M2X|rcsb pdb:7M2Y|go:"GO:1902440"(protein localization to mitotic spindle pole body)|refseq:NP_010643.3|mint:P32380|dip:DIP-702N - crc64:819ED1AD5D9400D3 crc64:04FAA074BB8A0BC8 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jyNQ4XuG4o2uZi6ztTIMCcgbQFM559292 rogid:FbhC86QRbeKKUOXntOgk8yWTEW4559292 intact-crc:86C117E4CFD20348|rigid:jQMFY35K5//WyNZEn7GlKjvF+C8 false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P29496 uniprotkb:P24279 intact:EBI-10549|ensemblfungi:YLR274W|uniprotkb:D6VYS1 intact:EBI-10541|ensemblfungi:YEL032W|uniprotkb:D3DLL7 psi-mi:mcm5_yeast(display_long)|uniprotkb:MCM5(gene name)|psi-mi:MCM5(display_short)|uniprotkb:CDC46(gene name synonym)|uniprotkb:YLR274W(locus name)|uniprotkb:L9328.1(orf name)|uniprotkb:Cell division control protein 46(gene name synonym) psi-mi:mcm3_yeast(display_long)|uniprotkb:MCM3(gene name)|psi-mi:MCM3(display_short)|uniprotkb:YEL032W(locus name)|uniprotkb:SYGP-ORF23(orf name)|uniprotkb:Minichromosome maintenance protein 3(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472429|imex:IM-18537-24 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013376.1|sgd:S000004264|go:"GO:0031261"(DNA replication preinitiation complex)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0031507"(heterochromatin assembly)|go:"GO:0031939"(obsolete negative regulation of chromatin silencing at telomere)|go:"GO:0033260"(nuclear DNA replication)|go:"GO:0042555"(MCM complex)|go:"GO:0071162"(CMG complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR001208(MCM)|interpro:IPR008048(MCM protein 5)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018525|interpro:IPR027417|interpro:IPR027925|interpro:IPR031327|interpro:IPR033762|go:"GO:0030174"(regulation of DNA-dependent DNA replication initiation)|interpro:IPR041562|rcsb pdb:3JA8|rcsb pdb:3JC6|rcsb pdb:3JC7|rcsb pdb:5BK4|rcsb pdb:5U8S|rcsb pdb:5U8T|rcsb pdb:5V8F|rcsb pdb:5XF8|rcsb pdb:6EYC|rcsb pdb:6F0L|rcsb pdb:6HV9|rcsb pdb:6PTJ|rcsb pdb:6PTN|rcsb pdb:6PTO|rcsb pdb:6RQC|rcsb pdb:6SKL|rcsb pdb:6SKO|rcsb pdb:6U0M|rcsb pdb:6WGF|rcsb pdb:3JC5|rcsb pdb:6WGG|rcsb pdb:6WGI|ensemblfungi:YLR274W(gene)|ensemblfungi:YLR274W_mRNA(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003682"(chromatin binding)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006348"|reactome:R-SCE-68949|reactome:R-SCE-69052|reactome:R-SCE-68962|dip:DIP-2406N refseq:NP_010882.1|sgd:S000000758|go:"GO:0005524"(ATP binding)|go:"GO:0003697"(single-stranded DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005656"(nuclear pre-replicative complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006267"(pre-replicative complex assembly involved in nuclear cell cycle DNA replication)|go:"GO:0006270"(DNA replication initiation)|go:"GO:0006271"(DNA strand elongation involved in DNA replication)|go:"GO:0006348"|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0031261"(DNA replication preinitiation complex)|go:"GO:0031298"(replication fork protection complex)|go:"GO:0042555"(MCM complex)|go:"GO:0071162"(CMG complex)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|go:"GO:1902975"(mitotic DNA replication initiation)|go:"GO:1904931"(MCM complex binding)|interpro:IPR001208(MCM)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008046(MCM protein 3)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR018525|interpro:IPR027417|interpro:IPR031327|interpro:IPR033762|interpro:IPR041562|rcsb pdb:3JA8|rcsb pdb:3JC5|rcsb pdb:3JC6|rcsb pdb:3JC7|rcsb pdb:5BK4|rcsb pdb:5U8S|rcsb pdb:5U8T|rcsb pdb:5V8F|rcsb pdb:6EYC|rcsb pdb:6F0L|rcsb pdb:6HV9|rcsb pdb:6PTJ|rcsb pdb:6PTN|rcsb pdb:6PTO|rcsb pdb:6RQC|rcsb pdb:6SKL|rcsb pdb:6SKO|rcsb pdb:6U0M|rcsb pdb:6WGC|rcsb pdb:6WGF|rcsb pdb:6WGG|rcsb pdb:6WGI|reactome:R-SCE-68949|reactome:R-SCE-68962|reactome:R-SCE-69052|rcsb pdb:5XF8|ensemblfungi:YEL032W(gene)|ensemblfungi:YEL032W_mRNA(transcript)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0003682"(chromatin binding)|go:"GO:0003688"(DNA replication origin binding)|mint:P24279|dip:DIP-2407N - crc64:01D9DE208A091CF2 crc64:43DD4DACAF4456DC figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:a8UgYOklJ5vWqhA0hbQTCWNQg0Y559292 rogid:OsFbdaTeE1vPQObriGt5M6mTPzk559292 intact-crc:87D488B56BA5F490|rigid:KH8vxcBKZYpUA3w8JobrlKyacYM false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P06103 uniprotkb:P32497 intact:EBI-8973|ensemblfungi:YOR361C|uniprotkb:D6W356 intact:EBI-8965|ensemblfungi:YMR309C|uniprotkb:D6W0D6 psi-mi:eif3b_yeast(display_long)|uniprotkb:YOR361C(locus name)|uniprotkb:PRT1(gene name)|psi-mi:PRT1(display_short)|uniprotkb:CDC63(gene name synonym)|uniprotkb:Eukaryotic translation initiation factor 3 90 kDa subunit(gene name synonym)|uniprotkb:Translation initiation factor eIF3 p90 subunit(gene name synonym)|uniprotkb:Cell cycle regulation and translation initiation protein(gene name synonym) psi-mi:eif3c_yeast(display_long)|uniprotkb:NIP1(gene name)|psi-mi:NIP1(display_short)|uniprotkb:YMR309C(locus name)|uniprotkb:YM9924.01C(orf name)|uniprotkb:YM9952.11C(orf name)|uniprotkb:Eukaryotic translation initiation factor 3 93 kDa subunit(gene name synonym)|uniprotkb:Nuclear transport protein NIP1(gene name synonym)|uniprotkb:Translation initiation factor eIF3, p93 subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472451|imex:IM-18537-26 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR361C(gene)|ensemblfungi:YOR361C_mRNA(transcript)|go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0002183"(cytoplasmic translational initiation)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005852"(eukaryotic translation initiation factor 3 complex)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043614"(multi-eIF complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR011400(Translation initiation factor eIF-3b)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR013979(Eukaryotic translation initiation factor 2A, central region)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR034363|interpro:IPR035979|rcsb pdb:3JAP|rcsb pdb:3JAQ|rcsb pdb:3NS5|rcsb pdb:3NS6|rcsb pdb:3ZWL|rcsb pdb:4U1E|rcsb pdb:4U1F|rcsb pdb:6FYX|rcsb pdb:6FYY|rcsb pdb:6GSM|rcsb pdb:6GSN|rcsb pdb:6ZCE|rcsb pdb:6ZU9|reactome:R-SCE-156827|reactome:R-SCE-72649|reactome:R-SCE-72695|reactome:R-SCE-72702|refseq:NP_015006.3|sgd:S000005888|mint:P06103|dip:DIP-2519N go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0003729"(mRNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005852"(eukaryotic translation initiation factor 3 complex)|ensemblfungi:YMR309C(gene)|ensemblfungi:YMR309C_mRNA(transcript)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0043614"(multi-eIF complex)|interpro:IPR000717(Proteasome component region PCI)|interpro:IPR008905(Eukaryotic translation initiation factor 3 subunit 8, N-terminal)|interpro:IPR027516|rcsb pdb:3JAP|rcsb pdb:4U1C|rcsb pdb:5H7U|rcsb pdb:6FYX|rcsb pdb:6FYY|rcsb pdb:6GSM|rcsb pdb:6GSN|rcsb pdb:6ZCE|rcsb pdb:6ZU9|reactome:R-SCE-156827|reactome:R-SCE-72649|reactome:R-SCE-72695|reactome:R-SCE-72702|refseq:NP_014040.1|sgd:S000004926|mint:P32497|dip:DIP-1470N - crc64:F5E4E783408EE948 crc64:EE05097C44C45A4C figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KeOY80g2TW3axiQNc1iJhsqEUPM559292 rogid:D2B5DHNCbowAIRjWdoxAkeP/CXk559292 intact-crc:50A10517ED29ED86|rigid:cLupf3PE32Gj89KXq04vlpnqKhA false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P16892 uniprotkb:P32830 intact:EBI-7193|uniprotkb:D6VPY4|ensemblfungi:YBL016W intact:EBI-11303|uniprotkb:D6VQ92|ensemblfungi:YBR091C psi-mi:fus3_yeast(display_long)|uniprotkb:FUS3(gene name)|psi-mi:FUS3(display_short)|uniprotkb:DAC2(gene name synonym)|uniprotkb:YBL016W(locus name)|uniprotkb:YBL0303(orf name)|uniprotkb:YBL03.21(orf name) psi-mi:tim12_yeast(display_long)|uniprotkb:TIM12(gene name)|psi-mi:TIM12(display_short)|uniprotkb:Mitochondrial regulator of splicing 5(gene name synonym)|uniprotkb:MRS5(gene name synonym)|uniprotkb:YBR0812(orf name)|uniprotkb:YBR091C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472495|imex:IM-18537-30 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009537.1|sgd:S000000112|dip:DIP-714N|mint:P16892|ensemblfungi:YBL016W(gene)|ensemblfungi:YBL016W_mRNA(transcript)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0004707"(MAP kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007049"(cell cycle)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010526"(negative regulation of transposition, RNA-mediated)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0042597"(periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0043332"(mating projection tip)|go:"GO:0043409"(negative regulation of MAPK cascade)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0046827"(positive regulation of protein export from nucleus)|go:"GO:0051301"(cell division)|go:"GO:0071507"(pheromone response MAPK cascade)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR003527(MAP kinase, conserved site)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:2B9F|rcsb pdb:2B9H|rcsb pdb:2B9I|rcsb pdb:2B9J|rcsb pdb:2F49|rcsb pdb:2F9G|rcsb pdb:2FA2|reactome:R-SCE-110056|reactome:R-SCE-111995|reactome:R-SCE-112409|reactome:R-SCE-112411|reactome:R-SCE-170968|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-2559582|reactome:R-SCE-3371453|reactome:R-SCE-375165|reactome:R-SCE-437239|reactome:R-SCE-445144|reactome:R-SCE-450341|reactome:R-SCE-5673001|reactome:R-SCE-5674135|reactome:R-SCE-5674499|reactome:R-SCE-5687128|reactome:R-SCE-6798695|reactome:R-SCE-881907|reactome:R-SCE-9634635 ensemblfungi:YBR091C(gene)|ensemblfungi:YBR091C_mRNA(transcript)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0042721"(TIM22 mitochondrial import inner membrane insertion complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0071806"(protein transmembrane transport)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027102|interpro:IPR035427|rcsb pdb:6LO8|go:"GO:0005758"(mitochondrial intermembrane space)|refseq:NP_009649.1|sgd:S000000295|dip:DIP-1140N - crc64:5117980D20A1E7E2 crc64:2C4B7DEE9695866D figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:FaPNQ+7PYnYCFIVspwEcRFOgv0w559292 rogid:3ABFY/s+od9+IAzJ30g58aElg5s559292 intact-crc:C0C0BAD0757DF1D8|rigid:EAbmIirKsMUPY0UhAbTmLem6YCY false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P13393 uniprotkb:P32774 intact:EBI-19129|uniprotkb:D3DM55|ensemblfungi:YER148W intact:EBI-19323|uniprotkb:D6VXM9|ensemblfungi:YKL058W psi-mi:tbp_yeast(display_long)|uniprotkb:YER148W(locus name)|uniprotkb:SPT15(gene name)|psi-mi:SPT15(display_short)|uniprotkb:BTF1(gene name synonym)|uniprotkb:TBP1(gene name synonym)|uniprotkb:TATA-box factor(gene name synonym)|uniprotkb:TATA-binding factor(gene name synonym)|uniprotkb:TATA sequence-binding protein(gene name synonym)|uniprotkb:Transcription factor D(gene name synonym)|uniprotkb:Transcription initiation factor TFIID TBP subunit(gene name synonym) psi-mi:t2ag_yeast(display_long)|uniprotkb:YKL058W(locus name)|uniprotkb:TOA2(gene name)|psi-mi:TOA2(display_short)|uniprotkb:TFIIA 13.5 kDa subunit(gene name synonym)|uniprotkb:General transcription factor IIA subunit 2(gene name synonym)|uniprotkb:Transcription initiation factor IIA small chain(gene name synonym)|uniprotkb:Transcription initiation factor IIA small subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472473|imex:IM-18537-28 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000950|ensemblfungi:YER148W(gene)|ensemblfungi:YER148W_mRNA(transcript)|go:"GO:0000126"(transcription factor TFIIIB complex)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0000995"(RNA polymerase III general transcription initiation factor activity)|go:"GO:0001016"(RNA polymerase III transcription regulatory region sequence-specific DNA binding)|go:"GO:0001092"(TFIIA-class transcription factor complex binding)|go:"GO:0001179"(RNA polymerase I general transcription initiation factor binding)|go:"GO:0001188"(RNA polymerase I preinitiation complex assembly)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005672"(transcription factor TFIIA complex)|go:"GO:0006352"(DNA-templated transcription, initiation)|go:"GO:0008301"(DNA binding, bending)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042790"(nucleolar large rRNA transcription by RNA polymerase I)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070893"(transposon integration)|go:"GO:0070898"(RNA polymerase III preinitiation complex assembly)|go:"GO:0097718"(disordered domain specific binding)|go:"GO:0140223"(general transcription initiation factor activity)|go:"GO:0140297"(DNA-binding transcription factor binding)|interpro:IPR000814(TATA-box binding)|interpro:IPR012295(Beta2-adaptin/TATA-box binding, C-terminal)|interpro:IPR030491|interpro:IPR033710|rcsb pdb:1NGM|rcsb pdb:1NH2|rcsb pdb:1RM1|rcsb pdb:1TBA|rcsb pdb:1TBP|rcsb pdb:1YTB|rcsb pdb:1YTF|rcsb pdb:4B0A|rcsb pdb:4V1N|rcsb pdb:4V1O|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5SVA|rcsb pdb:6CNB|rcsb pdb:6CNC|rcsb pdb:6CND|rcsb pdb:6CNF|rcsb pdb:6E16|rcsb pdb:6E24|rcsb pdb:6EU0|rcsb pdb:6F40|rcsb pdb:6F41|rcsb pdb:6F42|rcsb pdb:6F44|rcsb pdb:6GYK|rcsb pdb:6GYL|rcsb pdb:6GYM|rcsb pdb:6TBM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73772|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|reactome:R-SCE-76061|reactome:R-SCE-76066|reactome:R-SCE-9018519|refseq:NP_011075.3|dip:DIP-44N|mint:P13393 refseq:NP_012865.1|sgd:S000001541|ensemblfungi:YKL058W(gene)|ensemblfungi:YKL058W_mRNA(transcript)|go:"GO:0000979"(RNA polymerase II core promoter sequence-specific DNA binding)|go:"GO:0005672"(transcription factor TFIIA complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|interpro:IPR003194(Transcription initiation factor IIA, gamma subunit)|interpro:IPR009083(Transcription factor IIA, helical)|interpro:IPR009088(Transcription factor IIA, beta-barrel)|interpro:IPR015871(Transcription initiation factor IIA, gamma subunit, C-terminal)|interpro:IPR015872(Transcription initiation factor IIA, gamma subunit, N-terminal)|rcsb pdb:1NH2|rcsb pdb:1RM1|rcsb pdb:1YTF|rcsb pdb:5FMF|rcsb pdb:5FYW|rcsb pdb:5FZ5|rcsb pdb:5OQJ|rcsb pdb:5OQM|rcsb pdb:5SVA|rcsb pdb:6GYK|rcsb pdb:6GYM|rcsb pdb:7O4I|rcsb pdb:7O4J|rcsb pdb:7O72|rcsb pdb:7O73|rcsb pdb:7O75|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|reactome:R-SCE-9018519|rcsb pdb:6GYL|dip:DIP-2348N|mint:P32774 - crc64:50365FFF1D3718CE - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:fVZPztzKW8tuxDYYpZ7ZTFlq3Do559292 rogid:VhnV5wPU9U0wezVTAgcxZa9CZjQ559292 intact-crc:9E5D8F874C18E78B|rigid:4rRZdNZOahaCuUrvh+hWQsyXV/I false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32524 uniprotkb:Q07350 intact:EBI-603|intact:EBI-464832|uniprotkb:Q6Q5G7|uniprotkb:D6VVZ1|ensemblfungi:YJL203W intact:EBI-688|uniprotkb:Q05434|ensemblfungi:YDL043C|uniprotkb:D6VRV3 psi-mi:prp21_yeast(display_long)|uniprotkb:PRP21(gene name)|psi-mi:PRP21(display_short)|uniprotkb:SPP91(gene name synonym)|uniprotkb:YJL203W(locus name)|uniprotkb:J0322(orf name) psi-mi:prp11_yeast(display_long)|uniprotkb:PRP11(gene name)|psi-mi:PRP11(display_short)|uniprotkb:PRP10(gene name synonym)|uniprotkb:RNA11(gene name synonym)|uniprotkb:YDL043C(locus name)|uniprotkb:D2711(orf name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472462|imex:IM-18537-27 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012332.1|sgd:S000003739|dip:DIP-689N|mint:P32524|ensemblfungi:YJL203W(gene)|ensemblfungi:YJL203W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005686"(U2 snRNP)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR000061(SWAP/Surp)|interpro:IPR022030|interpro:IPR035967|rcsb pdb:4DGW|rcsb pdb:5NRL|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6G90|rcsb pdb:7DCO refseq:NP_010241.1|sgd:S000002201|ensemblfungi:YDL043C(gene)|ensemblfungi:YDL043C_mRNA(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005686"(U2 snRNP)|go:"GO:0008270"(zinc ion binding)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR003604(Zinc finger, U1-type)|interpro:IPR031781|interpro:IPR036236|rcsb pdb:4DGW|rcsb pdb:5GM6|rcsb pdb:5NRL|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6G90|dip:DIP-1001N|mint:Q07350 - crc64:2E9DBA6F06759B3F crc64:D8BA3BB27F36F06F figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mOta2u2zOwtuZB+8s4z9DBL9iI0559292 rogid:xyunpB0FKbtjXifS4hyBHPmL4zs559292 intact-crc:8B89BCE5CDF3F891|rigid:JzyUHJrzii+Zh7s75PKQC7TAHJI false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P33301 uniprotkb:P32829 intact:EBI-20599|uniprotkb:D6VT00|ensemblfungi:YDR369C intact:EBI-11255|uniprotkb:P87289|uniprotkb:Q07173|uniprotkb:D6W049|ensemblfungi:YMR224C psi-mi:xrs2_yeast(display_long)|uniprotkb:XRS2(gene name)|psi-mi:XRS2(display_short)|uniprotkb:D9481.13(orf name)|uniprotkb:YDR369C(locus name) psi-mi:mre11_yeast(display_long)|uniprotkb:YM9959.06C(orf name)|uniprotkb:YMR224C(locus name)|uniprotkb:MRE11(gene name)|psi-mi:MRE11(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472484|imex:IM-18537-29 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002777|refseq:NP_010657.3|ensemblfungi:YDR369C(gene)|ensemblfungi:YDR369C_mRNA(transcript)|go:"GO:0000723"(telomere maintenance)|go:"GO:0003677"(DNA binding)|go:"GO:0003691"(double-stranded telomeric DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0006284"(base-excision repair)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0030435"(sporulation resulting in formation of a cellular spore)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0030870"(Mre11 complex)|go:"GO:0035753"(maintenance of DNA trinucleotide repeats)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|go:"GO:0051880"(G-quadruplex DNA binding)|go:"GO:0097552"(mitochondrial double-strand break repair via homologous recombination)|interpro:IPR000253(Forkhead-associated)|interpro:IPR008984(SMAD/FHA domain)|dip:DIP-2420N|mint:P33301 go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0008296"(3'-5'-exodeoxyribonuclease activity)|go:"GO:0008408"(3'-5' exonuclease activity)|go:"GO:0010780"(meiotic DNA double-strand break formation involved in reciprocal meiotic recombination)|go:"GO:0010791"(DNA double-strand break processing involved in repair via synthesis-dependent strand annealing)|go:"GO:0030145"(manganese ion binding)|go:"GO:0030437"(ascospore formation)|go:"GO:0030870"(Mre11 complex)|go:"GO:0031573"(mitotic intra-S DNA damage checkpoint signaling)|go:"GO:0035753"(maintenance of DNA trinucleotide repeats)|go:"GO:0035861"(site of double-strand break)|go:"GO:0042138"(meiotic DNA double-strand break formation)|go:"GO:0042162"(telomeric DNA binding)|go:"GO:0043047"(single-stranded telomeric DNA binding)|go:"GO:0046940"(nucleoside monophosphate phosphorylation)|go:"GO:0007095"(mitotic G2 DNA damage checkpoint signaling)|go:"GO:0051037"(regulation of transcription involved in meiotic cell cycle)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0097552"(mitochondrial double-strand break repair via homologous recombination)|interpro:IPR003701(DNA repair exonuclease)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR007281(Mre11, DNA-binding)|interpro:IPR029052|interpro:IPR038487|interpro:IPR041796|reactome:R-SCE-1834949|reactome:R-SCE-5693548|go:"GO:0051880"(G-quadruplex DNA binding)|ensemblfungi:YMR224C(gene)|ensemblfungi:YMR224C_mRNA(transcript)|go:"GO:0000014"(single-stranded DNA endodeoxyribonuclease activity)|go:"GO:0000706"(meiotic DNA double-strand break processing)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000727"(double-strand break repair via break-induced replication)|go:"GO:0003691"(double-stranded telomeric DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0004520"(endodeoxyribonuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006281"(DNA repair)|go:"GO:0006284"(base-excision repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|refseq:NP_013951.1|sgd:S000004837|mint:P32829|dip:DIP-1313N - crc64:833DAD6D20F6693E crc64:D58433E32E852B73 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:o505mxGL67ZY1mBUls7e15A4JTY559292 rogid:q3Y06P4MqnJ1vjF7TFYmEzYB9zI559292 intact-crc:A277F79B83B42FDB|rigid:W5fZhoFxd2KhSRYKUjeDENmKYCk false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32830 uniprotkb:P87108 intact:EBI-11303|uniprotkb:D6VQ92|ensemblfungi:YBR091C intact:EBI-9115|ensemblfungi:YHR005C-A|uniprotkb:D3DKU9 psi-mi:tim12_yeast(display_long)|uniprotkb:TIM12(gene name)|psi-mi:TIM12(display_short)|uniprotkb:Mitochondrial regulator of splicing 5(gene name synonym)|uniprotkb:MRS5(gene name synonym)|uniprotkb:YBR0812(orf name)|uniprotkb:YBR091C(locus name) psi-mi:tim10_yeast(display_long)|uniprotkb:MRS11(gene name synonym)|uniprotkb:YHR005BC(orf name)|uniprotkb:YHR005C-A(locus name)|uniprotkb:TIM10(gene name)|psi-mi:TIM10(display_short)|uniprotkb:Mitochondrial intermembrane protein MRS11(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472506|imex:IM-18537-31 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YBR091C(gene)|ensemblfungi:YBR091C_mRNA(transcript)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0042721"(TIM22 mitochondrial import inner membrane insertion complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0071806"(protein transmembrane transport)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027102|interpro:IPR035427|rcsb pdb:6LO8|go:"GO:0005758"(mitochondrial intermembrane space)|refseq:NP_009649.1|sgd:S000000295|dip:DIP-1140N ensemblfungi:YHR005C-A(gene)|ensemblfungi:YHR005C-A_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0042719"(mitochondrial intermembrane space protein transporter complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0140318"(protein transporter activity)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027100|interpro:IPR035427|rcsb pdb:3DXR|rcsb pdb:6LO8|reactome:R-SCE-1268020|refseq:NP_011869.1|sgd:S000003530|dip:DIP-1141N|mint:P87108 - crc64:2C4B7DEE9695866D crc64:70DD4764B944FF17 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:3ABFY/s+od9+IAzJ30g58aElg5s559292 rogid:3AGstULCT5EBmHEk0EGsz9Rk9YA559292 intact-crc:6A960616904842ED|rigid:kKYx/hv/Hr3rCu8gGS5813KdEIk false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32867 uniprotkb:P40357 intact:EBI-2206525|uniprotkb:D6W3D8|ensemblfungi:YPL232W intact:EBI-16904|uniprotkb:D6VUE6|ensemblfungi:YGR009C psi-mi:sso1_yeast(display_long)|uniprotkb:SSO1(gene name)|psi-mi:SSO1(display_short)|uniprotkb:P1405(orf name)|uniprotkb:YPL232W(locus name) psi-mi:sec9_yeast(display_long)|uniprotkb:SEC9(gene name)|psi-mi:SEC9(display_short)|uniprotkb:HSS7(gene name synonym)|uniprotkb:YGR009C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472528|imex:IM-18537-33 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-2494N|reactome:R-SCE-114516|refseq:NP_015092.1|sgd:S000006153|reactome:R-SCE-9609523|reactome:R-SCE-199992|ensemblfungi:YPL232W(gene)|ensemblfungi:YPL232W_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005546"(phosphatidylinositol-4,5-bisphosphate binding)|go:"GO:0005628"(prospore membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006887"(exocytosis)|go:"GO:0006906"(vesicle fusion)|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030437"(ascospore formation)|go:"GO:0031201"(SNARE complex)|go:"GO:0031321"(ascospore-type prospore assembly)|go:"GO:0035493"(SNARE complex assembly)|go:"GO:0043325"(phosphatidylinositol-3,4-bisphosphate binding)|go:"GO:0048278"(vesicle docking)|go:"GO:0070300"(phosphatidic acid binding)|go:"GO:0071944"(cell periphery)|go:"GO:0080025"(phosphatidylinositol-3,5-bisphosphate binding)|interpro:IPR000727(Target SNARE coiled-coil region)|interpro:IPR006011(Syntaxin, N-terminal)|interpro:IPR006012(Syntaxin/epimorphin, conserved site)|interpro:IPR010989(t-SNARE)|rcsb pdb:1FIO|rcsb pdb:3B5N refseq:NP_011523.3|sgd:S000003241|go:"GO:0005886"(plasma membrane)|go:"GO:0005935"(cellular bud neck)|go:"GO:0006887"(exocytosis)|go:"GO:0006906"(vesicle fusion)|go:"GO:0015031"(protein transport)|go:"GO:0019897"(extrinsic component of plasma membrane)|go:"GO:0019905"(syntaxin binding)|go:"GO:0031201"(SNARE complex)|go:"GO:0035493"(SNARE complex assembly)|interpro:IPR000727(Target SNARE coiled-coil region)|rcsb pdb:3B5N|ensemblfungi:YGR009C(gene)|ensemblfungi:YGR009C_mRNA(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005829"(cytosol)|reactome:R-SCE-8980692|reactome:R-SCE-9013026|reactome:R-SCE-9013406|reactome:R-SCE-199992|reactome:R-SCE-6798695|dip:DIP-1460N - crc64:6E4C6D35C3CD9D94 crc64:EA314D73D20A10C7 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jGGWXFONgF8tb8qmlz8GnDfotuI559292 rogid:tJHRKaKoRiNkKYe415edbcOLuqA559292 intact-crc:5F2580690C21909F|rigid:JZ/crQU38FdA69Gu7jn9bNr72Ok false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32835 uniprotkb:P40069 intact:EBI-7926|uniprotkb:D6VYT9|ensemblfungi:YLR293C intact:EBI-9166|ensemblfungi:YER110C|uniprotkb:D3DM16 psi-mi:gsp1_yeast(display_long)|uniprotkb:CNR1(gene name synonym)|uniprotkb:CST17(gene name synonym)|uniprotkb:GTPase Ran homolog(gene name synonym)|uniprotkb:L8003.19(orf name)|uniprotkb:YLR293C(locus name)|uniprotkb:GSP1(gene name)|psi-mi:GSP1(display_short)|uniprotkb:Genetic suppressor of PRP20-1(gene name synonym)|uniprotkb:Chromosome stability protein 17(gene name synonym) psi-mi:imb4_yeast(display_long)|uniprotkb:KAP123(gene name)|psi-mi:KAP123(display_short)|uniprotkb:YRB4(gene name synonym)|uniprotkb:Karyopherin subunit beta-4(gene name synonym)|uniprotkb:Karyopherin-123(gene name synonym)|uniprotkb:Importin-123(gene name synonym)|uniprotkb:Ran-binding protein YRB4(gene name synonym)|uniprotkb:YER110C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472517|imex:IM-18537-32 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013396.1|sgd:S000004284|mint:P32835|dip:DIP-747N|ensemblfungi:YLR293C(gene)|ensemblfungi:YLR293C_mRNA(transcript)|go:"GO:0000054"(ribosomal subunit export from nucleus)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006997"(nucleus organization)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0031938"(obsolete regulation of chromatin silencing at telomere)|go:"GO:0046822"(regulation of nucleocytoplasmic transport)|go:"GO:1901987"(regulation of cell cycle phase transition)|interpro:IPR001806(Ras GTPase)|interpro:IPR002041(Ran GTPase)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|rcsb pdb:2X19|rcsb pdb:3ICQ|rcsb pdb:3M1I|rcsb pdb:3WYG|reactome:R-SCE-9615933 ensemblfungi:YER110C(gene)|ensemblfungi:YER110C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0008139"(nuclear localization sequence binding)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0031267"(small GTPase binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0061608"(nuclear import signal receptor activity)|go:"GO:2000220"(regulation of pseudohyphal growth)|interpro:IPR001494(Importin-beta, N-terminal)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR021133|interpro:IPR034085|interpro:IPR040122|refseq:NP_011035.1|sgd:S000000912|dip:DIP-2356N|mint:P40069 - crc64:C9D027033F8C70E1 crc64:9DC524C28BB71A46 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:1sewGL113s4tIFXpHVw2rtBUg/A559292 rogid:E/XrzLGKzHFsJvBQcIDl1NtRE6k559292 intact-crc:FFFC9588E50B3142|rigid:uKzyC0Ou8w1+ilFKN49UVkfUwHc false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P48837 uniprotkb:P34077 intact:EBI-12324|ensemblfungi:YGR119C|uniprotkb:D6VUQ0 intact:EBI-12056|ensemblfungi:YFR002W|uniprotkb:D6VTN2 psi-mi:nup57_yeast(display_long)|uniprotkb:NUP57(gene name)|psi-mi:NUP57(display_short)|uniprotkb:YGR119C(locus name)|uniprotkb:G6320(orf name)|uniprotkb:Nuclear pore protein NUP57(gene name synonym) psi-mi:nic96_yeast(display_long)|uniprotkb:YFR002W(locus name)|uniprotkb:NIC96(gene name)|psi-mi:NIC96(display_short)|uniprotkb:Nuclear pore protein NIC96(gene name synonym)|uniprotkb:96 kDa nucleoporin-interacting component(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472550|imex:IM-18537-35 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YGR119C(gene)|ensemblfungi:YGR119C_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006999"(nuclear pore organization)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0036228"(protein localization to nuclear inner membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0044613"(nuclear pore central transport channel)|go:"GO:0051028"(mRNA transport)|interpro:IPR024864|interpro:IPR025574|interpro:IPR025712|refseq:NP_011634.1|sgd:S000003351|mint:P48837|dip:DIP-866N ensemblfungi:YFR002W(gene)|ensemblfungi:YFR002W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006999"(nuclear pore organization)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044612"(nuclear pore linkers)|go:"GO:0044615"(nuclear pore nuclear basket)|interpro:IPR007231(Nucleoporin interacting component)|rcsb pdb:2RFO|rcsb pdb:6X07|rcsb pdb:2QX5|refseq:NP_116657.1|sgd:S000001898|mint:P34077|dip:DIP-745N - - - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ultDTflWHx7n/y2FrlWFf+lBKmw559292 rogid:gjcrAg3tofVODSE7T+SsoTVlesA559292 intact-crc:637E0D1C2C15B75F|rigid:xCkubdLdb9db49YxEwELLLglxRw false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32897 uniprotkb:P39515 intact:EBI-9136|ensemblfungi:YNR017W|uniprotkb:D6W1J2 intact:EBI-9127|uniprotkb:Q02310|ensemblfungi:YJL143W|uniprotkb:D6VW42 psi-mi:tim23_yeast(display_long)|uniprotkb:MIM23(gene name synonym)|uniprotkb:MPI3(gene name synonym)|uniprotkb:N3180(orf name)|uniprotkb:YNR017W(locus name)|uniprotkb:TIM23(gene name)|psi-mi:TIM23(display_short)|uniprotkb:MAS6(gene name synonym)|uniprotkb:Mitochondrial protein import protein 3(gene name synonym)|uniprotkb:Mitochondrial protein import protein MAS6(gene name synonym)|uniprotkb:Membrane import machinery protein MIM23(gene name synonym) psi-mi:tim17_yeast(display_long)|uniprotkb:MPI2(gene name synonym)|uniprotkb:TIM17(gene name)|psi-mi:TIM17(display_short)|uniprotkb:MIM17(gene name synonym)|uniprotkb:SMS1(gene name synonym)|uniprotkb:YJL143W(locus name)|uniprotkb:J0648(orf name)|uniprotkb:Mitochondrial protein import protein 2(gene name synonym)|uniprotkb:Mitochondrial inner membrane protein MIM17(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472539|imex:IM-18537-34 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-SCE-1268020|ensemblfungi:YNR017W(gene)|ensemblfungi:YNR017W_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005744"(TIM23 mitochondrial import inner membrane translocase complex)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0008320"(protein transmembrane transporter activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030943"(mitochondrion targeting sequence binding)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|interpro:IPR005681(Mitochondrial import inner membrane translocase, subunit Tim23)|refseq:NP_014414.3|sgd:S000005300|dip:DIP-2451N|mint:P32897 ensemblfungi:YJL143W(gene)|ensemblfungi:YJL143W_mRNA(transcript)|go:"GO:0000002"(mitochondrial genome maintenance)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005744"(TIM23 mitochondrial import inner membrane translocase complex)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0008320"(protein transmembrane transporter activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|interpro:IPR005678(Mitochondrial import inner membrane translocase, subunit Tim17)|reactome:R-SCE-1268020|refseq:NP_012392.1|sgd:S000003679|dip:DIP-2108N|mint:P39515 - crc64:08E5AB4F400F675B crc64:1760B08F3B60D378 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:nA6mnSq0Ek0I5g8LSJpLjojiRvc559292 rogid:ZsXqbOXWCZnMZNYjy+zSmN4LdCs559292 intact-crc:890AA512EEEC445E|rigid:T76so2poK+bCeu9ZpCcWBZ/gG2c false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P36084 uniprotkb:Q12186 intact:EBI-11612|ensemblfungi:YKL074C|uniprotkb:D6VXL2 intact:EBI-34012|ensemblfungi:YLR116W|uniprotkb:D6VYB4 psi-mi:mud2_yeast(display_long)|uniprotkb:MUD2(gene name)|psi-mi:MUD2(display_short)|uniprotkb:YKL358(orf name)|uniprotkb:YKL074C(locus name) psi-mi:bbp_yeast(display_long)|uniprotkb:MSL5(gene name)|psi-mi:MSL5(display_short)|uniprotkb:BBP(gene name synonym)|uniprotkb:YLR116W(locus name)|uniprotkb:Splicing factor 1(gene name synonym)|uniprotkb:Zinc finger protein BBP(gene name synonym)|uniprotkb:Mud synthetic-lethal 5 protein(gene name synonym)|uniprotkb:SF1(gene name synonym)|uniprotkb:L2949(orf name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472572|imex:IM-18537-37 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0000243"(commitment complex)|go:"GO:0000348"(mRNA branch site recognition)|go:"GO:0003729"(mRNA binding)|go:"GO:0008187"(poly-pyrimidine tract binding)|go:"GO:0016607"(nuclear speck)|ensemblfungi:YKL074C(gene)|go:"GO:0030628"(pre-mRNA 3'-splice site binding)|go:"GO:0045131"(pre-mRNA branch point binding)|go:"GO:0071004"(U2-type prespliceosome)|ensemblfungi:YKL074C_mRNA(transcript)|go:"GO:0089701"(U2AF complex)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|refseq:NP_012849.1|sgd:S000001557|mint:P36084|dip:DIP-758N ensemblfungi:YLR116W(gene)|ensemblfungi:YLR116W_mRNA(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0045131"(pre-mRNA branch point binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR001878(Zinc finger, CCHC-type)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR013041(Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain)|interpro:IPR031150|refseq:NP_013217.1|sgd:S000004106|mint:Q12186|dip:DIP-991N|interpro:IPR032570|interpro:IPR036612|interpro:IPR036875|rcsb pdb:3FMA|rcsb pdb:4WAL|rcsb pdb:4WAN - - - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2017/11/23 rogid:l/aBULMxdezuufNxUE5qqnYEN1Y559292 rogid:DMnGp//BLk+b8ycJoFmiBmgNQS0559292 intact-crc:CDA16812D59B40CB|rigid:6PAK0PkrxHZMTbHARPerJB/OWUU false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P35203 uniprotkb:P52286 intact:EBI-4085|uniprotkb:D6VZR7|ensemblfungi:YMR094W intact:EBI-4090|uniprotkb:Q07186|uniprotkb:D6VSW0|ensemblfungi:YDR328C psi-mi:cbf3c_yeast(display_long)|uniprotkb:CTF13(gene name)|psi-mi:CTF13(display_short)|uniprotkb:CBF3C(gene name synonym)|uniprotkb:YMR094W(locus name)|uniprotkb:YM9582.19(orf name)|uniprotkb:YM6543.01(orf name)|uniprotkb:Chromosome transmission fidelity protein 13(gene name synonym)|uniprotkb:Kinetochore protein CTF13(gene name synonym) psi-mi:skp1_yeast(display_long)|uniprotkb:SKP1(gene name)|psi-mi:SKP1(display_short)|uniprotkb:CBF3D(gene name synonym)|uniprotkb:YDR328C(locus name)|uniprotkb:D9798.14(orf name)|uniprotkb:Centromere DNA-binding protein complex CBF3 subunit D(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit SKP1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472561|imex:IM-18537-36 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013812.1|sgd:S000004700|dip:DIP-1277N|ensemblfungi:YMR094W(gene)|ensemblfungi:YMR094W_mRNA(transcript)|go:"GO:0000921"(septin ring assembly)|go:"GO:0005634"(nucleus)|go:"GO:0008301"(DNA binding, bending)|go:"GO:0031518"(CBF3 complex)|go:"GO:0051382"(kinetochore assembly)|interpro:IPR032675|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79 sgd:S000002736|refseq:NP_010615.3|dip:DIP-1236N|mint:P52286|ensemblfungi:YDR328C(gene)|ensemblfungi:YDR328C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000776"(kinetochore)|go:"GO:0000921"(septin ring assembly)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0010458"(exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031518"(CBF3 complex)|go:"GO:0034622"|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043291"(RAVE complex)|go:"GO:0045116"(protein neddylation)|go:"GO:0051382"(kinetochore assembly)|go:"GO:0097602"(cullin family protein binding)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:1NEX|rcsb pdb:3MKS|rcsb pdb:3V7D|rcsb pdb:5AN3|rcsb pdb:6F07|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79|reactome:R-SCE-174113|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:77B1C012FD74E56F crc64:746DDE6470A69432 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:7aPRGLmtozW0jfSaqAThUR8/4XQ559292 rogid:HO5Uz+KzzWNBubxoXRDNTVi8eIA559292 intact-crc:C5594668BF1C05FA|rigid:7vMwMXfdLUaEDtuY5h7r2FYouo8 false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P36149 uniprotkb:Q03784 intact:EBI-3567|uniprotkb:D6VXC9|ensemblfungi:YKR068C intact:EBI-19474|uniprotkb:D6VSM6|ensemblfungi:YDR246W psi-mi:bet3_yeast(display_long)|uniprotkb:YKR068C(locus name)|uniprotkb:BET3(gene name)|psi-mi:BET3(display_short)|uniprotkb:Transport protein particle 22 kDa subunit(gene name synonym) psi-mi:trs23_yeast(display_long)|uniprotkb:TRS23(gene name)|psi-mi:TRS23(display_short)|uniprotkb:YDR246W(locus name)|uniprotkb:YD8419.13(orf name)|uniprotkb:Transport protein particle 23 kDa subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472583|imex:IM-18537-38 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012994.1|sgd:S000001776|dip:DIP-1710N|mint:P36149|ensemblfungi:YKR068C(gene)|ensemblfungi:YKR068C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0030008"(TRAPP complex)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033106"(cis-Golgi network membrane)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:1990070"(TRAPPI protein complex)|go:"GO:1990071"(TRAPPII protein complex)|go:"GO:1990072"(TRAPPIII protein complex)|interpro:IPR007194("Transport protein particle (TRAPP) component, Bet3")|interpro:IPR016721(TRAPP I complex, Bet3)|interpro:IPR024096|rcsb pdb:3CUE|rcsb pdb:7KMT|reactome:R-SCE-204005|reactome:R-SCE-8876198 sgd:S000002654|ensemblfungi:YDR246W(gene)|ensemblfungi:YDR246W_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0030008"(TRAPP complex)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:0051276"(chromosome organization)|go:"GO:1990070"(TRAPPI protein complex)|go:"GO:1990071"(TRAPPII protein complex)|go:"GO:1990072"(TRAPPIII protein complex)|interpro:IPR007233(Sybindin-like protein)|interpro:IPR011012(Longin-like)|rcsb pdb:3CUE|rcsb pdb:7KMT|reactome:R-SCE-204005|reactome:R-SCE-8876198|refseq:NP_010532.3|dip:DIP-5813N|mint:Q03784 - crc64:C802D8A3563DE82B crc64:8B32B1D5FE3846ED figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:XN0vyDhpSkOFxu+sgthTqABoSxM559292 rogid:YjMZl4mUzPhM4t2K6pBhXHiLpGY559292 intact-crc:05BEF45A47F1F152|rigid:velJuEwQsDqahnlSpdOMgdn1OHc false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P39014 uniprotkb:Q12018 intact:EBI-11507|uniprotkb:D6VVN6|ensemblfungi:YIL046W intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 psi-mi:met30_yeast(display_long)|uniprotkb:YIL046W(locus name)|uniprotkb:MET30(gene name)|psi-mi:MET30(display_short)|uniprotkb:Methionine-requiring protein 30(gene name synonym)|uniprotkb:"E3 ubiquitin ligase complex SCF(Met30) subunit MET30"(gene name synonym) psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472605|imex:IM-18537-40 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YIL046W_mRNA(transcript)|ensemblfungi:YIL046W(gene)|go:"GO:0000083"(regulation of transcription involved in G1/S transition of mitotic cell cycle)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0009086"(methionine biosynthetic process)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0019344"(cysteine biosynthetic process)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043224"(nuclear SCF ubiquitin ligase complex)|go:"GO:0046685"(response to arsenic-containing substance)|go:"GO:0046686"(response to cadmium ion)|interpro:IPR001680(WD40 repeat)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036047|interpro:IPR036322|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|refseq:NP_012218.1|sgd:S000001308|mint:P39014|dip:DIP-1439N dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:5135D4BCA2E1EB97 crc64:22BC8B35034EDDEF figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:B138OcWsG8zW/eFMselD2pFyy5c559292 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 intact-crc:5676D3CF4DE94574|rigid:aZi2RtDJzeshkpPSq3HPCr7EOKo false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P38302 uniprotkb:Q03654 intact:EBI-20921|uniprotkb:D6VQI3|ensemblfungi:YBR188C intact:EBI-476|uniprotkb:Q6B1D8|ensemblfungi:YMR213W|uniprotkb:D6W038 psi-mi:ntc20_yeast(display_long)|uniprotkb:YBR188C(locus name)|uniprotkb:YBR1316(orf name)|uniprotkb:NTC20(gene name)|psi-mi:NTC20(display_short)|uniprotkb:SNT384(gene name synonym)|uniprotkb:PRP19-associated complex protein 20(gene name synonym)|uniprotkb:Synergistic to PRP19 mutation protein 384(gene name synonym) psi-mi:cef1_yeast(display_long)|uniprotkb:CEF1(gene name)|psi-mi:CEF1(display_short)|uniprotkb:YMR213W(locus name)|uniprotkb:YM8261.07(orf name)|uniprotkb:NTC85(gene name synonym)|uniprotkb:PRP nineteen-associated complex protein 85(gene name synonym)|uniprotkb:PRP19-associated complex protein 85(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472594|imex:IM-18537-39 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009747.3|sgd:S000000392|mint:P38302|ensemblfungi:YBR188C(gene)|ensemblfungi:YBR188C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|dip:DIP-1683N refseq:NP_013940.1|sgd:S000004826|ensemblfungi:YMR213W(gene)|ensemblfungi:YMR213W_mRNA(transcript)|go:"GO:0000350"(generation of catalytic spliceosome for second transesterification step)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003677"(DNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|interpro:IPR021786|rcsb pdb:5GM6|rcsb pdb:5GMK|rcsb pdb:5LJ3|rcsb pdb:5LJ5|rcsb pdb:5LQW|rcsb pdb:5MPS|rcsb pdb:5MQ0|rcsb pdb:5WSG|rcsb pdb:5Y88|rcsb pdb:5YLZ|rcsb pdb:6BK8|rcsb pdb:6EXN|rcsb pdb:6J6G|rcsb pdb:6J6H|rcsb pdb:6J6N|rcsb pdb:6J6Q|rcsb pdb:7DCO|dip:DIP-1113N|mint:Q03654 - crc64:15C5234B25213223 crc64:A4C417A8B330EA9C figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Ucc4R0lhhhAQfrsXvs+BtCnuJQg559292 rogid:AsbV7RtNk+8mCzLk2wZYqbULOFg559292 intact-crc:3EC014C2C3EE6859|rigid:Ya+gSBltU+gN/RA2jOHuWWCUINo false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P39081 uniprotkb:P25298 intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C intact:EBI-15632|uniprotkb:D6VZN5|ensemblfungi:YMR061W psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym) psi-mi:rna14_yeast(display_long)|uniprotkb:YM9796.14(orf name)|uniprotkb:YMR061W(locus name)|uniprotkb:RNA14(gene name)|psi-mi:RNA14(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472616|imex:IM-18537-41 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z refseq:NP_013777.1|sgd:S000004665|go:"GO:0072423"(response to DNA damage checkpoint signaling)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR003107(RNA-processing protein, HAT helix)|interpro:IPR008847(Suppressor of forked)|interpro:IPR011990(Tetratricopeptide-like helical)|rcsb pdb:2L9B|ensemblfungi:YMR061W(gene)|ensemblfungi:YMR061W_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0031123"(RNA 3'-end processing)|dip:DIP-1488N|mint:P25298 - crc64:66F91BA9577E82F1 crc64:102433295FE7CD63 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292 rogid:Ful6ie8/P/XQWsmSjGP4HMQLFgE559292 intact-crc:4451996DBF6A6084|rigid:kkmREFipPcsG0Z/wnRHqf6lwwi8 false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P25299 uniprotkb:P39081 intact:EBI-15640|uniprotkb:D6VU95|ensemblfungi:YGL044C intact:EBI-12980|uniprotkb:Q04932|uniprotkb:D6VSL0|ensemblfungi:YDR228C psi-mi:rna15_yeast(display_long)|uniprotkb:YGL044C(locus name)|uniprotkb:RNA15(gene name)|psi-mi:RNA15(display_short) psi-mi:pcf11_yeast(display_long)|uniprotkb:PCF11(gene name)|psi-mi:PCF11(display_short)|uniprotkb:YDR228C(locus name)|uniprotkb:YD9934.13C(orf name)|uniprotkb:protein 1 of CF I(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472627|imex:IM-18537-42 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011471.1|sgd:S000003012|ensemblfungi:YGL044C(gene)|ensemblfungi:YGL044C_mRNA(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0072423"(response to DNA damage checkpoint signaling)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR026896|interpro:IPR035979|interpro:IPR038192|rcsb pdb:2KM8|rcsb pdb:2L9B|rcsb pdb:2X1A|rcsb pdb:2X1B|rcsb pdb:2X1F|dip:DIP-1489N|mint:P25299 sgd:S000002636|ensemblfungi:YDR228C(gene)|ensemblfungi:YDR228C_mRNA(transcript)|refseq:NP_010514.3|go:"GO:0000993"(RNA polymerase II complex binding)|dip:DIP-944N|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005849"(mRNA cleavage factor complex)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0030846"("termination of RNA polymerase II transcription, poly(A)-coupled")|go:"GO:0030847"(termination of RNA polymerase II transcription, exosome-dependent)|go:"GO:0098789"(pre-mRNA cleavage required for polyadenylation)|interpro:IPR006569(Regulation of nuclear pre-mRNA protein)|interpro:IPR008942(ENTH/VHS)|interpro:IPR021605|rcsb pdb:1SZ9|rcsb pdb:1SZA|rcsb pdb:2BF0|rcsb pdb:2NAX|rcsb pdb:2NPI|rcsb pdb:4C0B|rcsb pdb:4C0H|rcsb pdb:4OI4|rcsb pdb:5M9Z - crc64:10053B8648A71ECB crc64:66F91BA9577E82F1 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:TqfxsTHAh9CPJJ6Q7uH6kz988hk559292 rogid:NT0NGp2ly1eBgnP0a3SbaAxU0ok559292 intact-crc:E596420009B15D27|rigid:7emghQj2LSzPaBmxVf8gzfzmEtQ false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P04147 uniprotkb:P39935 intact:EBI-12823|ensemblfungi:YER165W|uniprotkb:D3DM73 intact:EBI-9002|ensemblfungi:YGR162W|uniprotkb:D6VUU6 psi-mi:pabp_yeast(display_long)|uniprotkb:PAB1(gene name)|psi-mi:PAB1(display_short)|uniprotkb:ARS consensus-binding protein ACBP-67(gene name synonym)|uniprotkb:Polyadenylate tail-binding protein(gene name synonym)|uniprotkb:YER165W(locus name) psi-mi:if4f1_yeast(display_long)|uniprotkb:YGR162W(locus name)|uniprotkb:TIF4631(gene name)|psi-mi:TIF4631(display_short)|uniprotkb:eIF4G1(gene name synonym)|uniprotkb:mRNA cap-binding protein complex subunit p150(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472649|imex:IM-18537-44 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YER165W(gene)|go:"GO:0006446"(regulation of translational initiation)|go:"GO:0008143"("poly(A) binding")|ensemblfungi:YER165W_mRNA(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003730"(mRNA 3'-UTR binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005840"(ribosome)|go:"GO:0006397"(mRNA processing)|go:"GO:0008266"("poly(U) RNA binding")|go:"GO:0008428"(ribonuclease inhibitor activity)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0034236"(protein kinase A catalytic subunit binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0060211"("regulation of nuclear-transcribed mRNA poly(A) tail shortening")|go:"GO:1990841"(promoter-specific chromatin binding)|go:"GO:1990904"(ribonucleoprotein complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR002004(Polyadenylate-binding protein/Hyperplastic disc protein)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR006515(Polyadenylate binding protein, human types 1, 2, 3, 4)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|interpro:IPR036053|rcsb pdb:1IFW|rcsb pdb:6R5K|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-975956|reactome:R-SCE-975957|reactome:R-SCE-156827|refseq:NP_011092.1|sgd:S000000967|mint:P04147|dip:DIP-2275N ensemblfungi:YGR162W(gene)|ensemblfungi:YGR162W_mRNA(transcript)|go:"GO:0000932"(P-body)|go:"GO:0001671"(ATPase activator activity)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0010942"(positive regulation of cell death)|go:"GO:0016281"(eukaryotic translation initiation factor 4F complex)|go:"GO:0032268"(regulation of cellular protein metabolic process)|go:"GO:0034063"(stress granule assembly)|go:"GO:0042273"(ribosomal large subunit biogenesis)|go:"GO:1900103"(positive regulation of endoplasmic reticulum unfolded protein response)|go:"GO:1901195"(positive regulation of formation of translation preinitiation complex)|go:"GO:1902280"(regulation of RNA helicase activity)|rcsb pdb:2VSO|rcsb pdb:2VSX|rcsb pdb:6Z29|reactome:R-SCE-156827|reactome:R-SCE-166208|reactome:R-SCE-429947|reactome:R-SCE-72649|reactome:R-SCE-72662|reactome:R-SCE-72702|reactome:R-SCE-975956|reactome:R-SCE-975957|interpro:IPR003890(MIF4G-like, type 3)|interpro:IPR016021(MIF4-like, type 1/2/3)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR022745|interpro:IPR036211|rcsb pdb:1RF8|refseq:NP_011678.3|sgd:S000003394|mint:P39935|dip:DIP-985N - crc64:4F97E494753E17C7 crc64:391256802F86118E figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:6ZjESO1CUgykLdGVlTuZoFRwqyg559292 rogid:l5wtszbSL7dltfdiDAVe5zYnxVc559292 intact-crc:952FBF7AEC8BB38C|rigid:zFJjdfJriP7r84Pild6SSHLSEjU false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P40014 uniprotkb:Q04477 intact:EBI-22458|uniprotkb:D3DLR6|ensemblfungi:YER018C intact:EBI-27228|uniprotkb:D6VZU0|ensemblfungi:YMR117C psi-mi:spc25_yeast(display_long)|uniprotkb:YER018C(locus name)|uniprotkb:SPC25(gene name)|psi-mi:SPC25(display_short) psi-mi:spc24_yeast(display_long)|uniprotkb:SPC24(gene name)|psi-mi:SPC24(display_short)|uniprotkb:YM9718.16C(orf name)|uniprotkb:YMR117C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472660|imex:IM-18537-45 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010934.3|sgd:S000000820|dip:DIP-2990N|mint:P40014|ensemblfungi:YER018C(gene)|ensemblfungi:YER018C_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|go:"GO:0007059"(chromosome segregation)|go:"GO:0031262"(Ndc80 complex)|go:"GO:0051301"(cell division)|go:"GO:0098653"(centromere clustering)|interpro:IPR038066|rcsb pdb:2FTX|rcsb pdb:2FV4|rcsb pdb:4GEQ|rcsb pdb:5T6J|rcsb pdb:5TCS|rcsb pdb:5TD8|rcsb pdb:7KDF refseq:NP_013835.1|sgd:S000004723|mint:Q04477|dip:DIP-893N|ensemblfungi:YMR117C(gene)|ensemblfungi:YMR117C_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|go:"GO:0007059"(chromosome segregation)|go:"GO:0031262"(Ndc80 complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|go:"GO:0098653"(centromere clustering)|interpro:IPR013252(Kinetochore-Ndc80 subunit Spc24)|interpro:IPR038066|rcsb pdb:2FTX|rcsb pdb:2FV4|rcsb pdb:4GEQ|rcsb pdb:5T6J|rcsb pdb:5TCS|rcsb pdb:5TD8|rcsb pdb:7KDF - crc64:1BED6CCFF330A5D8 crc64:8BE4B8619DD4C8FB figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:i5gKRZA7GAjnCVzuX/qP8YmpQRA559292 rogid:B12w0JvNs2He1WjK6c241nF3pZc559292 intact-crc:BBDF1DB52C301327|rigid:kFcOWWSr5XGaZIDaoMeh05/UAGU false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P39743 uniprotkb:P15891 intact:EBI-14500|uniprotkb:D6VT22|ensemblfungi:YDR388W intact:EBI-2036|uniprotkb:D6VR88|ensemblfungi:YCR088W psi-mi:rv167_yeast(display_long)|uniprotkb:D9509.8(orf name)|uniprotkb:YDR388W(locus name)|uniprotkb:RVS167(gene name)|psi-mi:RVS167(display_short) psi-mi:abp1_yeast(display_long)|uniprotkb:ABP1(gene name)|psi-mi:ABP1(display_short)|uniprotkb:YCR88W(orf name)|uniprotkb:YCR088W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472638|imex:IM-18537-43 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR388W(gene)|ensemblfungi:YDR388W_mRNA(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0006897"(endocytosis)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031097"(medial cortex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043332"(mating projection tip)|go:"GO:0051666"(actin cortical patch localization)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0072741"(protein localization to cell division site)|go:"GO:0097320"(plasma membrane tubulation)|go:"GO:1903475"(mitotic actomyosin contractile ring assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR004148(BAR)|interpro:IPR027267|interpro:IPR036028|go:"GO:1990528"(Rvs161p-Rvs167p complex)|refseq:NP_010676.1|sgd:S000002796|mint:P39743|dip:DIP-770N sgd:S000000684|refseq:NP_010012.1|dip:DIP-534N|mint:P15891|ensemblfungi:YCR088W(gene)|ensemblfungi:YCR088W_mRNA(transcript)|go:"GO:0000147"(actin cortical patch assembly)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0030427"(site of polarized growth)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0043332"(mating projection tip)|go:"GO:0044379"(protein localization to actin cortical patch)|go:"GO:0051015"(actin filament binding)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR001452(Src homology-3)|interpro:IPR002108(Actin-binding, cofilin/tropomyosin type)|interpro:IPR029006|interpro:IPR035718|interpro:IPR036028|rcsb pdb:1HQZ|rcsb pdb:1JO8|rcsb pdb:2K3B|rcsb pdb:2RPN|reactome:R-SCE-6798695|reactome:R-SCE-8856828|reactome:R-SCE-9013405 - crc64:3F0AB53EBCC95A5B crc64:39523510704D94AA figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:w3CZzhpvanHbodoFFlzkAHnsQyA559292 rogid:GNPpMO8tuHFODmA3UzxSuTpdqZY559292 intact-crc:D2B4905427D29C8C|rigid:7gMBVrNqMbgO/xYVlYy4SbGxCfo false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P47093 uniprotkb:P40070 intact:EBI-313|uniprotkb:D6VWJ6|ensemblfungi:YJR022W intact:EBI-188|uniprotkb:Q07091|uniprotkb:D3DM18|ensemblfungi:YER112W psi-mi:lsm8_yeast(display_long)|uniprotkb:LSM8(gene name)|psi-mi:LSM8(display_short)|uniprotkb:J1464(orf name)|uniprotkb:YJR83.16(orf name)|uniprotkb:YJR022W(locus name) psi-mi:lsm4_yeast(display_long)|uniprotkb:LSM4(gene name)|psi-mi:LSM4(display_short)|uniprotkb:SDB23(gene name synonym)|uniprotkb:USS1(gene name synonym)|uniprotkb:YER112W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472671|imex:IM-18537-46 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012556.2|sgd:S000003783|ensemblfungi:YJR022W(gene)|ensemblfungi:YJR022W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0016070"(RNA metabolic process)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0071011"(precatalytic spliceosome)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034103|interpro:IPR044642|dip:DIP-903N|rcsb pdb:3JCM|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|mint:P47093 sgd:S000000914|refseq:NP_011037.3|mint:P40070|dip:DIP-848N|ensemblfungi:YER112W(gene)|ensemblfungi:YER112W_mRNA(transcript)|go:"GO:0000387"(spliceosomal snRNP assembly)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0017070"(U6 snRNA binding)|go:"GO:0033962"(P-body assembly)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:0097526"(spliceosomal tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR027141|interpro:IPR034101|rcsb pdb:3JCM|rcsb pdb:4C8Q|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039 - crc64:B6E37F585B6292EA crc64:69CAC1F01D5BFA98 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:+X6fjvb8flf36BcPKxtclUwNMSY559292 rogid:Sz8HLaybwgxCRbeCESby3YThqeM559292 intact-crc:AB9E148AE60D0729|rigid:Lc2xE3OxMQCTOEynaAr3SVrBUpU false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P47017 uniprotkb:P40089 intact:EBI-174|ensemblfungi:YJL124C|uniprotkb:D6VW62 intact:EBI-10236|uniprotkb:D3DM53|ensemblfungi:YER146W psi-mi:lsm1_yeast(display_long)|uniprotkb:LSM1(gene name)|psi-mi:LSM1(display_short)|uniprotkb:SPB8(gene name synonym)|uniprotkb:YJL124C(locus name)|uniprotkb:J0714(orf name)|uniprotkb:SPB8 protein(gene name synonym) psi-mi:lsm5_yeast(display_long)|uniprotkb:LSM5(gene name)|psi-mi:LSM5(display_short)|uniprotkb:YER146W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472682|imex:IM-18537-47 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012411.1|sgd:S000003660|rcsb pdb:4M75|reactome:R-SCE-430039|ensemblfungi:YJL124C(gene)|ensemblfungi:YJL124C_mRNA(transcript)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000339"(RNA cap binding)|go:"GO:0000932"(P-body)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0016070"(RNA metabolic process)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034104|interpro:IPR044642|rcsb pdb:4C8Q|rcsb pdb:4C92|mint:P47017|dip:DIP-1330N refseq:NP_011073.1|sgd:S000000948|ensemblfungi:YER146W(gene)|ensemblfungi:YER146W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR033871|rcsb pdb:4C8Q|rcsb pdb:3JCM|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039|dip:DIP-1417N|mint:P40089 - crc64:2632FA5288E178A2 crc64:84E8A1E8E2F078FE figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:7WmwhwOOHPT7qJ7sexTqdb43md8559292 rogid:+Q2uxsm6FVpx5lehw62szhlGh8U559292 intact-crc:2B8C1E881E45A286|rigid:a0ZYeYX5OF4KpLnu9CG3ZVpUV1Q false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P41695 uniprotkb:P26449 intact:EBI-3816|uniprotkb:D6VUX1|ensemblfungi:YGR188C intact:EBI-3830|uniprotkb:D6W292|ensemblfungi:YOR026W psi-mi:bub1_yeast(display_long)|uniprotkb:YGR188C(locus name)|uniprotkb:G7542(orf name)|uniprotkb:BUB1(gene name)|psi-mi:BUB1(display_short) psi-mi:bub3_yeast(display_long)|uniprotkb:OR26.16(orf name)|uniprotkb:YOR026W(locus name)|uniprotkb:BUB3(gene name)|psi-mi:BUB3(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472704|imex:IM-18537-49 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003420|refseq:NP_011704.3|dip:DIP-2236N|mint:P41695|ensemblfungi:YGR188C(gene)|ensemblfungi:YGR188C_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0004672"(protein kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0016236"(macroautophagy)|go:"GO:0031134"(sister chromatid biorientation)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0034508"(centromere complex assembly)|go:"GO:0042802"(identical protein binding)|go:"GO:0051754"(meiotic sister chromatid cohesion, centromeric)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR012572(Mad3-like)|interpro:IPR013212(Mad3/BUB1 homology region 1)|interpro:IPR015661(Mitotic checkpoint serine/threonine protein kinase, Bub1)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|rcsb pdb:2I3S|rcsb pdb:3ESL|rcsb pdb:4BL0|reactome:R-SCE-141430 refseq:NP_014669.1|sgd:S000005552|reactome:R-SCE-141430|dip:DIP-1219N|ensemblfungi:YOR026W(gene)|ensemblfungi:YOR026W_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0007094"(mitotic spindle assembly checkpoint signaling)|go:"GO:0033597"(mitotic checkpoint complex)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0044774"(mitotic DNA integrity checkpoint signaling)|go:"GO:1902499"(positive regulation of protein autoubiquitination)|go:"GO:1990298"(bub1-bub3 complex)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|rcsb pdb:1U4C|rcsb pdb:1YFQ|rcsb pdb:2I3S|rcsb pdb:2I3T|rcsb pdb:4BL0 - crc64:6D76FC980775D3F9 crc64:0BDFB8697935BCEB figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:O4X/wXB2iXRdSVxIGA9nG1Sj5dI559292 rogid:y8P+TfgWS+dySWQDW7eo6YOGjwU559292 intact-crc:105758B76E61514A|rigid:uPMpRTuexHAEMob+3KmUDHDObUs false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P22141 uniprotkb:P40303 intact:EBI-13988|ensemblfungi:YER012W|uniprotkb:D3DLQ9 intact:EBI-13980|ensemblfungi:YOL038W|uniprotkb:D6W229 psi-mi:psb4_yeast(display_long)|uniprotkb:PRE1(gene name)|psi-mi:PRE1(display_short)|uniprotkb:YER012W(locus name)|uniprotkb:Proteasome component C11(gene name synonym)|uniprotkb:Macropain subunit C11(gene name synonym)|uniprotkb:Proteinase YSCE subunit 11(gene name synonym)|uniprotkb:Multicatalytic endopeptidase complex subunit C11(gene name synonym) psi-mi:psa4_yeast(display_long)|uniprotkb:PRE6(gene name)|psi-mi:PRE6(display_short)|uniprotkb:YOL038W(locus name)|uniprotkb:Proteasome component PRE6(gene name synonym)|uniprotkb:Macropain subunit PRE6(gene name synonym)|uniprotkb:Proteinase YSCE subunit PRE6(gene name synonym)|uniprotkb:Multicatalytic endopeptidase complex subunit PRE6(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472693|imex:IM-18537-48 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:4QVP|rcsb pdb:4QVQ|rcsb pdb:4QVV|rcsb pdb:4QVW|rcsb pdb:4QVY|rcsb pdb:4QW0|rcsb pdb:4QW1|rcsb pdb:4QW3|rcsb pdb:4QW4|rcsb pdb:4QW5|rcsb pdb:4QW6|rcsb pdb:4QW7|rcsb pdb:4QWF|rcsb pdb:4QWG|rcsb pdb:4QWI|rcsb pdb:4QWJ|rcsb pdb:4QWK|rcsb pdb:4QWL|rcsb pdb:4QWR|rcsb pdb:4QWS|rcsb pdb:4QWU|rcsb pdb:4QWX|rcsb pdb:4QXJ|ensemblfungi:YER012W(gene)|ensemblfungi:YER012W_mRNA(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004298"(threonine-type endopeptidase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005839"(proteasome core complex)|go:"GO:0010499"(proteasomal ubiquitin-independent protein catabolic process)|go:"GO:0019774"(proteasome core complex, beta-subunit complex)|go:"GO:0034515"(proteasome storage granule)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|go:"GO:0061133"(endopeptidase activator activity)|interpro:IPR001353(20S proteasome, A and B subunits)|interpro:IPR016050(Proteasome, beta-type subunit, conserved site)|interpro:IPR023333|interpro:IPR029055|interpro:IPR035206|rcsb pdb:1FNT|rcsb pdb:1G0U|rcsb pdb:1G65|rcsb pdb:1JD2|rcsb pdb:1RYP|rcsb pdb:1Z7Q|rcsb pdb:2F16|rcsb pdb:2FAK|rcsb pdb:2GPL|rcsb pdb:2ZCY|rcsb pdb:3BDM|rcsb pdb:3D29|rcsb pdb:3DY3|rcsb pdb:3DY4|rcsb pdb:3E47|rcsb pdb:3GPJ|rcsb pdb:3GPT|rcsb pdb:3GPW|rcsb pdb:3HYE|rcsb pdb:3JCO|rcsb pdb:3JCP|rcsb pdb:3MG0|rcsb pdb:3MG4|rcsb pdb:3MG6|rcsb pdb:3MG7|rcsb pdb:3MG8|rcsb pdb:3NZJ|rcsb pdb:3NZW|rcsb pdb:3NZX|rcsb pdb:3OEU|rcsb pdb:3OEV|rcsb pdb:3OKJ|rcsb pdb:3SDI|refseq:NP_010928.1|sgd:S000000814|rcsb pdb:3SDK|rcsb pdb:3SHJ|rcsb pdb:3TDD|rcsb pdb:3UN4|rcsb pdb:3UN8|rcsb pdb:3WXR|rcsb pdb:4CR2|rcsb pdb:4CR3|rcsb pdb:4CR4|rcsb pdb:4EU2|rcsb pdb:4FZC|rcsb pdb:4FZG|rcsb pdb:4G4S|rcsb pdb:4GK7|rcsb pdb:4HNP|rcsb pdb:4HRC|rcsb pdb:4HRD|rcsb pdb:4INR|rcsb pdb:4INT|rcsb pdb:4INU|rcsb pdb:4J70|rcsb pdb:4JSQ|rcsb pdb:4JSU|rcsb pdb:4JT0|rcsb pdb:4LQI|rcsb pdb:4LTC|rcsb pdb:4NNN|rcsb pdb:4NNW|rcsb pdb:4NO1|rcsb pdb:4NO6|rcsb pdb:4NO8|rcsb pdb:4NO9|rcsb pdb:4Q1S|rcsb pdb:4QBY|rcsb pdb:4QLQ|rcsb pdb:4QLS|rcsb pdb:4QLT|rcsb pdb:4QLU|rcsb pdb:4QLV|rcsb pdb:4QUX|rcsb pdb:4QUY|rcsb pdb:4QV0|rcsb pdb:4QV1|rcsb pdb:4QV3|rcsb pdb:4QV4|rcsb pdb:4QV5|rcsb pdb:4QV6|rcsb pdb:4QV7|rcsb pdb:4QV8|rcsb pdb:4QV9|rcsb pdb:4QVL|rcsb pdb:4QVM|rcsb pdb:4QVN|rcsb pdb:4Y8N|rcsb pdb:4Y8O|rcsb pdb:4Y8P|rcsb pdb:4Y8Q|rcsb pdb:4Y8R|rcsb pdb:4Y8S|rcsb pdb:4Y8T|rcsb pdb:4Y8U|rcsb pdb:4Y9Y|rcsb pdb:4Y9Z|rcsb pdb:4YA0|rcsb pdb:4YA1|rcsb pdb:4YA2|rcsb pdb:4YA3|rcsb pdb:4YA4|rcsb pdb:4YA5|rcsb pdb:4YA7|rcsb pdb:4YA9|rcsb pdb:4Z1L|rcsb pdb:5A5B|rcsb pdb:5AHJ|rcsb pdb:5BOU|rcsb pdb:5BXL|rcsb pdb:5BXN|rcsb pdb:5CGF|rcsb pdb:5CGG|rcsb pdb:5CGH|rcsb pdb:5CGI|rcsb pdb:5CZ4|rcsb pdb:5CZ5|rcsb pdb:5CZ6|rcsb pdb:5CZ7|rcsb pdb:5CZ8|rcsb pdb:5CZ9|rcsb pdb:5CZA|rcsb pdb:5D0S|rcsb pdb:5D0T|rcsb pdb:5D0V|rcsb pdb:5D0W|rcsb pdb:5D0X|rcsb pdb:5D0Z|rcsb pdb:5DKI|rcsb pdb:5DKJ|rcsb pdb:5FG7|rcsb pdb:5FG9|rcsb pdb:5FGA|rcsb pdb:5FGD|rcsb pdb:5FGE|rcsb pdb:5FGF|rcsb pdb:5FGG|rcsb pdb:5FGH|rcsb pdb:5FGI|rcsb pdb:5FHS|rcsb pdb:5JHR|rcsb pdb:5JHS|rcsb pdb:5L52|rcsb pdb:5L54|rcsb pdb:5L55|rcsb pdb:5L5A|rcsb pdb:5L5B|rcsb pdb:5L5D|rcsb pdb:5L5E|rcsb pdb:5L5F|rcsb pdb:5L5H|rcsb pdb:5L67|rcsb pdb:5L68|rcsb pdb:5L5I|rcsb pdb:5L5J|rcsb pdb:5L5O|rcsb pdb:5L5P|rcsb pdb:5L5Q|rcsb pdb:5L5R|rcsb pdb:5L5S|rcsb pdb:5L5T|rcsb pdb:5L5U|rcsb pdb:5L5V|rcsb pdb:5L5W|rcsb pdb:5L5X|rcsb pdb:5L5Y|rcsb pdb:5L5Z|rcsb pdb:5L60|rcsb pdb:5L61|rcsb pdb:5L62|rcsb pdb:5L63|rcsb pdb:5L64|rcsb pdb:5L65|rcsb pdb:5L66|rcsb pdb:5L69|rcsb pdb:5L6A|rcsb pdb:5L6B|rcsb pdb:5L6C|rcsb pdb:5LAI|rcsb pdb:5LAJ|rcsb pdb:5LTT|rcsb pdb:5M2B|rcsb pdb:5MP9|rcsb pdb:5MPA|rcsb pdb:5MPB|rcsb pdb:5MPC|rcsb pdb:5NIF|rcsb pdb:5WVI|rcsb pdb:5WVK|rcsb pdb:6EF3|rcsb pdb:6FVT|rcsb pdb:6FVU|rcsb pdb:6FVV|rcsb pdb:6FVW|rcsb pdb:6FVX|rcsb pdb:6FVY|rcsb pdb:6G7F|rcsb pdb:6G8M|rcsb pdb:6G8N|rcsb pdb:6GOP|rcsb pdb:6H39|rcsb pdb:6HTB|rcsb pdb:6HTC|rcsb pdb:6HTD|rcsb pdb:6HTP|rcsb pdb:6HTR|rcsb pdb:6HUB|rcsb pdb:6HUC|rcsb pdb:6HUQ|rcsb pdb:6HUU|rcsb pdb:6HUV|rcsb pdb:6HV3|rcsb pdb:6HV4|rcsb pdb:6HV5|rcsb pdb:6HV7|rcsb pdb:6HVA|rcsb pdb:6HVR|rcsb pdb:6HVS|rcsb pdb:6HVT|rcsb pdb:6HVU|rcsb pdb:6HVV|rcsb pdb:6HVW|rcsb pdb:6HVX|rcsb pdb:6HVY|rcsb pdb:6HW0|rcsb pdb:6HW3|rcsb pdb:6HW4|rcsb pdb:6HW5|rcsb pdb:6HW6|rcsb pdb:6HW7|rcsb pdb:6HW8|rcsb pdb:6HW9|rcsb pdb:6HWA|rcsb pdb:6HWB|rcsb pdb:6HWC|rcsb pdb:6HWD|rcsb pdb:6HWE|rcsb pdb:6HWF|rcsb pdb:6J2C|rcsb pdb:6J2N|rcsb pdb:6J2Q|rcsb pdb:6J2X|rcsb pdb:6J30|rcsb pdb:6ZOU|rcsb pdb:6ZP6|reactome:R-SCE-983168|rcsb pdb:6ZP8|rcsb pdb:7LS5|rcsb pdb:7LS6|rcsb pdb:7LSX|reactome:R-SCE-1236978|reactome:R-SCE-174113|reactome:R-SCE-5668541|reactome:R-SCE-5687128|reactome:R-SCE-5689880|reactome:R-SCE-68949|reactome:R-SCE-69017|reactome:R-SCE-69601|reactome:R-SCE-75815|reactome:R-SCE-8854050|reactome:R-SCE-8948751|rcsb pdb:4QZ0|rcsb pdb:4QZ1|rcsb pdb:4QZ2|rcsb pdb:4QZ3|rcsb pdb:4QZ4|rcsb pdb:4QZ5|rcsb pdb:4QZ6|rcsb pdb:4QZ7|rcsb pdb:4QZW|rcsb pdb:4QZX|rcsb pdb:4QZZ|rcsb pdb:4R00|rcsb pdb:4R02|rcsb pdb:4R17|rcsb pdb:4R18|rcsb pdb:4RUR|rcsb pdb:4V7O|rcsb pdb:4X6Z|rcsb pdb:4Y69|rcsb pdb:4Y6A|rcsb pdb:4Y6V|rcsb pdb:4Y6Z|rcsb pdb:4Y70|rcsb pdb:4Y74|rcsb pdb:4Y75|rcsb pdb:4Y77|rcsb pdb:4Y78|rcsb pdb:4Y7W|rcsb pdb:4Y7X|rcsb pdb:4Y7Y|rcsb pdb:4Y80|rcsb pdb:4Y81|rcsb pdb:4Y82|rcsb pdb:4Y84|rcsb pdb:4Y8G|rcsb pdb:4Y8H|rcsb pdb:4Y8I|rcsb pdb:4Y8J|rcsb pdb:4Y8K|rcsb pdb:4Y8L|rcsb pdb:4Y8M|mint:P22141|dip:DIP-2808N ensemblfungi:YOL038W(gene)|ensemblfungi:YOL038W_mRNA(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004298"(threonine-type endopeptidase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005839"(proteasome core complex)|go:"GO:0010499"(proteasomal ubiquitin-independent protein catabolic process)|go:"GO:0019773"(proteasome core complex, alpha-subunit complex)|go:"GO:0034515"(proteasome storage granule)|go:"GO:0042175"(nuclear outer membrane-endoplasmic reticulum membrane network)|go:"GO:0043161"(proteasome-mediated ubiquitin-dependent protein catabolic process)|interpro:IPR000426(Proteasome alpha-subunit, conserved site)|interpro:IPR001353(20S proteasome, A and B subunits)|interpro:IPR016050(Proteasome, beta-type subunit, conserved site)|interpro:IPR023332|interpro:IPR029055|rcsb pdb:1FNT|rcsb pdb:1G0U|rcsb pdb:1G65|rcsb pdb:1JD2|rcsb pdb:1RYP|rcsb pdb:1Z7Q|rcsb pdb:2F16|rcsb pdb:2FAK|rcsb pdb:2GPL|rcsb pdb:2ZCY|rcsb pdb:3BDM|rcsb pdb:3D29|rcsb pdb:3DY3|rcsb pdb:3DY4|rcsb pdb:4QZ1|rcsb pdb:4QZ2|rcsb pdb:4QZ3|rcsb pdb:4QZ4|rcsb pdb:4QZ5|rcsb pdb:4QZ6|rcsb pdb:4QZ7|rcsb pdb:4QZW|rcsb pdb:4QZX|rcsb pdb:4QZZ|rcsb pdb:4R00|rcsb pdb:4R02|rcsb pdb:4R17|rcsb pdb:4R18|rcsb pdb:4RUR|rcsb pdb:4V7O|rcsb pdb:4X6Z|rcsb pdb:4Y69|rcsb pdb:4Y6A|rcsb pdb:4Y6V|rcsb pdb:4Y6Z|rcsb pdb:4Y70|rcsb pdb:4Y74|rcsb pdb:4Y75|rcsb pdb:4Y77|rcsb pdb:4Y78|rcsb pdb:4Y7W|rcsb pdb:4Y7X|rcsb pdb:4Y7Y|rcsb pdb:4Y80|rcsb pdb:4QZ0|rcsb pdb:4Y81|rcsb pdb:4Y82|rcsb pdb:4Y84|rcsb pdb:4Y8H|rcsb pdb:4Y8I|rcsb pdb:4Y8J|rcsb pdb:4Y8K|rcsb pdb:4Y8L|rcsb pdb:4Y8M|rcsb pdb:4Y8N|rcsb pdb:4Y8O|rcsb pdb:4Y8P|rcsb pdb:4Y8Q|rcsb pdb:4Y8R|rcsb pdb:4Y8S|rcsb pdb:4Y8T|rcsb pdb:4Y8U|rcsb pdb:4Y9Y|rcsb pdb:4Y9Z|rcsb pdb:4YA0|rcsb pdb:4YA1|rcsb pdb:4YA2|rcsb pdb:4YA3|rcsb pdb:4Y8G|rcsb pdb:4YA4|rcsb pdb:4YA5|rcsb pdb:4YA7|rcsb pdb:4YA9|rcsb pdb:4Z1L|rcsb pdb:5A5B|rcsb pdb:5AHJ|rcsb pdb:5BOU|rcsb pdb:5BXN|rcsb pdb:5CGF|rcsb pdb:5CGG|rcsb pdb:5CGH|rcsb pdb:5CGI|rcsb pdb:5CZ4|rcsb pdb:5CZ5|rcsb pdb:5CZ6|rcsb pdb:5CZ7|rcsb pdb:5CZ8|rcsb pdb:5CZ9|rcsb pdb:5CZA|rcsb pdb:5D0S|rcsb pdb:5D0T|rcsb pdb:5D0V|rcsb pdb:5D0W|rcsb pdb:5D0X|rcsb pdb:5BXL|rcsb pdb:5D0Z|rcsb pdb:5DKI|rcsb pdb:5DKJ|rcsb pdb:5FG9|rcsb pdb:5FGA|rcsb pdb:5FGD|rcsb pdb:5FGE|rcsb pdb:5FGF|rcsb pdb:5FGG|rcsb pdb:5FGH|rcsb pdb:5FG7|rcsb pdb:5FGI|rcsb pdb:5FHS|rcsb pdb:5JHR|rcsb pdb:5JHS|rcsb pdb:5L52|rcsb pdb:5L54|rcsb pdb:5L55|rcsb pdb:5L5A|rcsb pdb:5L5B|rcsb pdb:5L5D|rcsb pdb:5L5E|rcsb pdb:5L5F|rcsb pdb:5L5H|rcsb pdb:5L5I|rcsb pdb:5L5J|rcsb pdb:5L5O|rcsb pdb:5L5P|rcsb pdb:5L5Q|rcsb pdb:5L5R|rcsb pdb:5L5S|rcsb pdb:5L5T|rcsb pdb:5L5U|rcsb pdb:5L5V|rcsb pdb:5L5W|rcsb pdb:5L5X|rcsb pdb:5L5Y|rcsb pdb:5L5Z|rcsb pdb:5L60|rcsb pdb:5L61|rcsb pdb:5L62|rcsb pdb:5L63|rcsb pdb:5L64|rcsb pdb:5L65|rcsb pdb:5L66|rcsb pdb:5L67|rcsb pdb:5L68|rcsb pdb:5L69|rcsb pdb:5L6A|rcsb pdb:5L6B|rcsb pdb:5LAI|rcsb pdb:5LAJ|rcsb pdb:5LTT|rcsb pdb:5M2B|rcsb pdb:5MP9|rcsb pdb:5MPA|rcsb pdb:5MPB|rcsb pdb:5MPC|rcsb pdb:5NIF|rcsb pdb:5WVI|rcsb pdb:5WVK|rcsb pdb:6EF0|rcsb pdb:6EF1|rcsb pdb:6EF2|rcsb pdb:6EF3|rcsb pdb:6FVT|rcsb pdb:6FVU|rcsb pdb:6FVV|rcsb pdb:5L6C|rcsb pdb:6FVW|rcsb pdb:6FVY|rcsb pdb:6G7F|rcsb pdb:6G8M|rcsb pdb:6G8N|rcsb pdb:6GOP|rcsb pdb:6H39|rcsb pdb:6HTB|rcsb pdb:6HTC|rcsb pdb:6HTD|rcsb pdb:6HTP|rcsb pdb:6HTR|rcsb pdb:6HUB|rcsb pdb:6HUC|rcsb pdb:6HUQ|rcsb pdb:6FVX|rcsb pdb:6HUU|rcsb pdb:6HUV|rcsb pdb:6HV3|rcsb pdb:6HV4|rcsb pdb:6HV5|rcsb pdb:6HV7|rcsb pdb:6HVA|rcsb pdb:6HVR|rcsb pdb:6HVS|rcsb pdb:6HVT|rcsb pdb:6HVU|rcsb pdb:6HVV|rcsb pdb:6HVW|rcsb pdb:6HVX|rcsb pdb:6HVY|rcsb pdb:6HW0|rcsb pdb:6HW3|rcsb pdb:6HW4|rcsb pdb:6HW5|rcsb pdb:6HW6|rcsb pdb:6HW7|rcsb pdb:6HW8|rcsb pdb:6HW9|rcsb pdb:6HWA|rcsb pdb:6HWB|rcsb pdb:6HWC|rcsb pdb:6HWE|rcsb pdb:6HWF|rcsb pdb:6J2C|rcsb pdb:6J2N|rcsb pdb:6J2Q|rcsb pdb:6HWD|rcsb pdb:6J2X|rcsb pdb:6J30|rcsb pdb:6ZOU|rcsb pdb:6ZP6|rcsb pdb:6ZP8|rcsb pdb:7LS5|rcsb pdb:7LS6|rcsb pdb:7LSX|reactome:R-SCE-1236978|reactome:R-SCE-174113|reactome:R-SCE-5668541|reactome:R-SCE-5687128|reactome:R-SCE-5689880|reactome:R-SCE-68949|reactome:R-SCE-69017|reactome:R-SCE-69601|reactome:R-SCE-75815|reactome:R-SCE-8854050|reactome:R-SCE-8948751|reactome:R-SCE-983168|rcsb pdb:3E47|rcsb pdb:3GPJ|rcsb pdb:3GPT|rcsb pdb:3GPW|rcsb pdb:3HYE|rcsb pdb:3JCO|rcsb pdb:3JCP|rcsb pdb:3MG0|rcsb pdb:3MG4|rcsb pdb:3MG6|rcsb pdb:3MG7|rcsb pdb:3MG8|rcsb pdb:3NZJ|rcsb pdb:3NZW|rcsb pdb:3NZX|rcsb pdb:3OEU|rcsb pdb:3OEV|rcsb pdb:3OKJ|rcsb pdb:3SDI|rcsb pdb:3SDK|rcsb pdb:3SHJ|rcsb pdb:3TDD|rcsb pdb:3UN4|rcsb pdb:3UN8|rcsb pdb:3WXR|rcsb pdb:4CR2|rcsb pdb:4CR3|rcsb pdb:4CR4|rcsb pdb:4EU2|rcsb pdb:4FZC|rcsb pdb:4FZG|rcsb pdb:4G4S|rcsb pdb:4GK7|rcsb pdb:4HRC|rcsb pdb:4HRD|rcsb pdb:4INR|rcsb pdb:4INT|rcsb pdb:4INU|rcsb pdb:4J70|rcsb pdb:4JSQ|rcsb pdb:4JSU|rcsb pdb:4JT0|rcsb pdb:4LQI|rcsb pdb:4LTC|rcsb pdb:4NNN|rcsb pdb:4NNW|rcsb pdb:4NO1|rcsb pdb:4HNP|rcsb pdb:4NO6|rcsb pdb:4NO8|rcsb pdb:4NO9|rcsb pdb:4Q1S|rcsb pdb:4QBY|rcsb pdb:4QLQ|rcsb pdb:4QLS|rcsb pdb:4QLT|rcsb pdb:4QLU|rcsb pdb:4QLV|rcsb pdb:4QUX|rcsb pdb:4QUY|rcsb pdb:4QV1|rcsb pdb:4QV3|rcsb pdb:4QV4|rcsb pdb:4QV5|rcsb pdb:4QV6|rcsb pdb:4QV7|rcsb pdb:4QV8|rcsb pdb:4QV9|rcsb pdb:4QVL|rcsb pdb:4QVM|rcsb pdb:4QVN|rcsb pdb:4QVP|rcsb pdb:4QVQ|rcsb pdb:4QVV|rcsb pdb:4QVW|rcsb pdb:4QVY|rcsb pdb:4QW0|rcsb pdb:4QW1|rcsb pdb:4QW3|rcsb pdb:4QW4|rcsb pdb:4QW5|rcsb pdb:4QW6|rcsb pdb:4QW7|rcsb pdb:4QWF|rcsb pdb:4QWG|rcsb pdb:4QV0|rcsb pdb:4QWI|rcsb pdb:4QWJ|rcsb pdb:4QWK|rcsb pdb:4QWL|rcsb pdb:4QWR|rcsb pdb:4QWS|rcsb pdb:4QWU|rcsb pdb:4QWX|rcsb pdb:4QXJ|refseq:NP_014604.1|sgd:S000005398|mint:P40303|dip:DIP-4844N - crc64:ED43D319A5895B40 crc64:73AEE63B836E618A figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tzWxNgSLM/MVJpa7jSoNaS0I12Q559292 rogid:G8IQr0G8FhiWc0DYUlh3vecHQsU559292 intact-crc:B6B860B66F40FB0A|rigid:+BZfsigkqrER5CgYIolHDirD7fo false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P48581 uniprotkb:Q02574 intact:EBI-14652|uniprotkb:D6W361|ensemblfungi:YOR368W intact:EBI-10658|uniprotkb:P87260|uniprotkb:Q05887|ensemblfungi:YLR288C|uniprotkb:D6VYT4 psi-mi:rad17_yeast(display_long)|uniprotkb:YOR368W(locus name)|uniprotkb:RAD17(gene name)|psi-mi:RAD17(display_short)|uniprotkb:DNA repair exonuclease RAD17(gene name synonym) psi-mi:mec3_yeast(display_long)|uniprotkb:MEC3(gene name)|psi-mi:MEC3(display_short)|uniprotkb:PIP3(gene name synonym)|uniprotkb:YLR288C(locus name)|uniprotkb:L8003.15(orf name)|uniprotkb:PSO9(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472737|imex:IM-18537-52 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015013.1|sgd:S000005895|ensemblfungi:YOR368W(gene)|ensemblfungi:YOR368W_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0030896"(checkpoint clamp complex)|interpro:IPR003021(Repair protein Rad1/Rec1)|interpro:IPR016587(Cell cycle checkpoint, RAD17)|reactome:R-SCE-176187|dip:DIP-1546N|mint:P48581 refseq:NP_013391.1|sgd:S000004279|ensemblfungi:YLR288C(gene)|ensemblfungi:YLR288C_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003677"(DNA binding)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0030896"(checkpoint clamp complex)|go:"GO:0031573"(mitotic intra-S DNA damage checkpoint signaling)|go:"GO:0033314"(mitotic DNA replication checkpoint signaling)|go:"GO:0035861"(site of double-strand break)|go:"GO:0044778"(meiotic DNA integrity checkpoint signaling)|interpro:IPR007150(Hus1-like protein)|reactome:R-SCE-176187|mint:Q02574|dip:DIP-1432N - crc64:BFF7074676C483C9 crc64:4385CEFA9130FEA3 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:U8Ccg8pUNM0qdbk/OZojYH4x4ig559292 rogid:LuYCya9O8z1Uw0xyfJnz3aowolg559292 intact-crc:CE136BB90038F328|rigid:zbfHmwWXE6qOlizqamDQwGaA5pw false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P25632 uniprotkb:P43609 intact:EBI-21941|uniprotkb:D6VR60|ensemblfungi:YCR052W intact:EBI-23005|uniprotkb:Q6B289|uniprotkb:D6VTS0|ensemblfungi:YFR037C psi-mi:rsc6_yeast(display_long)|uniprotkb:YCR052W(locus name)|uniprotkb:Remodel the structure of chromatin complex subunit 6(gene name synonym)|uniprotkb:RSC6(gene name)|psi-mi:RSC6(display_short)|uniprotkb:YCR52W(orf name) psi-mi:rsc8_yeast(display_long)|uniprotkb:RSC8(gene name)|psi-mi:RSC8(display_short)|uniprotkb:YFR037C(locus name)|uniprotkb:SWH3(gene name synonym)|uniprotkb:Remodel the structure of chromatin complex subunit 8(gene name synonym)|uniprotkb:SWI3 homolog(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472715|imex:IM-18537-50 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009981.1|sgd:S000000648|ensemblfungi:YCR052W(gene)|ensemblfungi:YCR052W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR036885|rcsb pdb:6K15|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|mint:P25632|dip:DIP-4999N|rcsb pdb:6TDA|rcsb pdb:6V8O|rcsb pdb:6V92|reactome:R-SCE-3214858 sgd:S000001933|refseq:NP_116695.3|dip:DIP-1478N|mint:P43609|interpro:IPR041984|interpro:IPR043145|rcsb pdb:6K15|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6V8O|rcsb pdb:6V92|reactome:R-SCE-3214858|ensemblfungi:YFR037C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|ensemblfungi:YFR037C(gene)|interpro:IPR032451|interpro:IPR036388 - crc64:6A9998BDBC4D24B2 crc64:D3D3120397CF0058 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:g3TbXsv1xKx+qR1OztQABvrHpWk559292 rogid:KpjkVJpv/5nqhpXBAhQZ3CzUr9k559292 intact-crc:8FD2026B7E162D69|rigid:S3+ZBvv9VtrrycynNcxZjWDIpNg false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P40089 uniprotkb:P47017 intact:EBI-10236|uniprotkb:D3DM53|ensemblfungi:YER146W intact:EBI-174|ensemblfungi:YJL124C|uniprotkb:D6VW62 psi-mi:lsm5_yeast(display_long)|uniprotkb:LSM5(gene name)|psi-mi:LSM5(display_short)|uniprotkb:YER146W(locus name) psi-mi:lsm1_yeast(display_long)|uniprotkb:LSM1(gene name)|psi-mi:LSM1(display_short)|uniprotkb:SPB8(gene name synonym)|uniprotkb:YJL124C(locus name)|uniprotkb:J0714(orf name)|uniprotkb:SPB8 protein(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472726|imex:IM-18537-51 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011073.1|sgd:S000000948|ensemblfungi:YER146W(gene)|ensemblfungi:YER146W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR033871|rcsb pdb:4C8Q|rcsb pdb:3JCM|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039|dip:DIP-1417N|mint:P40089 refseq:NP_012411.1|sgd:S000003660|rcsb pdb:4M75|reactome:R-SCE-430039|ensemblfungi:YJL124C(gene)|ensemblfungi:YJL124C_mRNA(transcript)|go:"GO:0000288"(nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay)|go:"GO:0000290"(deadenylation-dependent decapping of nuclear-transcribed mRNA)|go:"GO:0000339"(RNA cap binding)|go:"GO:0000932"(P-body)|go:"GO:0003682"(chromatin binding)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006397"(mRNA processing)|go:"GO:0016070"(RNA metabolic process)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR034104|interpro:IPR044642|rcsb pdb:4C8Q|rcsb pdb:4C92|mint:P47017|dip:DIP-1330N - crc64:84E8A1E8E2F078FE crc64:2632FA5288E178A2 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:+Q2uxsm6FVpx5lehw62szhlGh8U559292 rogid:7WmwhwOOHPT7qJ7sexTqdb43md8559292 intact-crc:C3169A405C2B8224|rigid:a0ZYeYX5OF4KpLnu9CG3ZVpUV1Q false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P34077 uniprotkb:P48837 intact:EBI-12056|ensemblfungi:YFR002W|uniprotkb:D6VTN2 intact:EBI-12324|ensemblfungi:YGR119C|uniprotkb:D6VUQ0 psi-mi:nic96_yeast(display_long)|uniprotkb:YFR002W(locus name)|uniprotkb:NIC96(gene name)|psi-mi:NIC96(display_short)|uniprotkb:Nuclear pore protein NIC96(gene name synonym)|uniprotkb:96 kDa nucleoporin-interacting component(gene name synonym) psi-mi:nup57_yeast(display_long)|uniprotkb:NUP57(gene name)|psi-mi:NUP57(display_short)|uniprotkb:YGR119C(locus name)|uniprotkb:G6320(orf name)|uniprotkb:Nuclear pore protein NUP57(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472748|imex:IM-18537-53 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YFR002W(gene)|ensemblfungi:YFR002W_mRNA(transcript)|go:"GO:0000055"(ribosomal large subunit export from nucleus)|go:"GO:0005643"(nuclear pore)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006999"(nuclear pore organization)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044612"(nuclear pore linkers)|go:"GO:0044615"(nuclear pore nuclear basket)|interpro:IPR007231(Nucleoporin interacting component)|rcsb pdb:2RFO|rcsb pdb:6X07|rcsb pdb:2QX5|refseq:NP_116657.1|sgd:S000001898|mint:P34077|dip:DIP-745N ensemblfungi:YGR119C(gene)|ensemblfungi:YGR119C_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0006606"(protein import into nucleus)|go:"GO:0006607"(NLS-bearing protein import into nucleus)|go:"GO:0006999"(nuclear pore organization)|go:"GO:0017056"(structural constituent of nuclear pore)|go:"GO:0031965"(nuclear membrane)|go:"GO:0036228"(protein localization to nuclear inner membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0044613"(nuclear pore central transport channel)|go:"GO:0051028"(mRNA transport)|interpro:IPR024864|interpro:IPR025574|interpro:IPR025712|refseq:NP_011634.1|sgd:S000003351|mint:P48837|dip:DIP-866N - - - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:gjcrAg3tofVODSE7T+SsoTVlesA559292 rogid:ultDTflWHx7n/y2FrlWFf+lBKmw559292 intact-crc:8BE489D46E7B97FD|rigid:xCkubdLdb9db49YxEwELLLglxRw false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12018 uniprotkb:P52286 intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 intact:EBI-4090|uniprotkb:Q07186|uniprotkb:D6VSW0|ensemblfungi:YDR328C psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:skp1_yeast(display_long)|uniprotkb:SKP1(gene name)|psi-mi:SKP1(display_short)|uniprotkb:CBF3D(gene name synonym)|uniprotkb:YDR328C(locus name)|uniprotkb:D9798.14(orf name)|uniprotkb:Centromere DNA-binding protein complex CBF3 subunit D(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit SKP1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472759|imex:IM-18537-54 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 sgd:S000002736|refseq:NP_010615.3|dip:DIP-1236N|mint:P52286|ensemblfungi:YDR328C(gene)|ensemblfungi:YDR328C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000776"(kinetochore)|go:"GO:0000921"(septin ring assembly)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0010458"(exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031518"(CBF3 complex)|go:"GO:0034622"|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043291"(RAVE complex)|go:"GO:0045116"(protein neddylation)|go:"GO:0051382"(kinetochore assembly)|go:"GO:0097602"(cullin family protein binding)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:1NEX|rcsb pdb:3MKS|rcsb pdb:3V7D|rcsb pdb:5AN3|rcsb pdb:6F07|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79|reactome:R-SCE-174113|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:22BC8B35034EDDEF crc64:746DDE6470A69432 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 rogid:HO5Uz+KzzWNBubxoXRDNTVi8eIA559292 intact-crc:171E8ACEC4A25155|rigid:jOTJGUJ8/FiR/WQblFXHrdihz0k false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P53267 uniprotkb:P53168 intact:EBI-23268|uniprotkb:Q9P422|uniprotkb:D6VUP6|ensemblfungi:YGR113W intact:EBI-23800|uniprotkb:D6VU80|ensemblfungi:YGL061C psi-mi:dam1_yeast(display_long)|uniprotkb:YGR113W(locus name)|uniprotkb:G6153(orf name)|uniprotkb:DAM1(gene name)|psi-mi:DAM1(display_short)|uniprotkb:Outer kinetochore protein DAM1(gene name synonym)|uniprotkb:DUO1 and MPS1-interacting protein 1(gene name synonym)|uniprotkb:Kinetochore assembly protein DAM1(gene name synonym) psi-mi:duo1_yeast(display_long)|uniprotkb:YGL061C(locus name)|uniprotkb:DUO1(gene name)|psi-mi:DUO1(display_short)|uniprotkb:Outer kinetochore protein DUO1(gene name synonym)|uniprotkb:Death upon overproduction protein 1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472781|imex:IM-18537-56 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003345|refseq:NP_011628.4|dip:DIP-1286N|mint:P53267|ensemblfungi:YGR113W(gene)|ensemblfungi:YGR113W_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0008608"(attachment of spindle microtubules to kinetochore)|go:"GO:0031116"(positive regulation of microtubule polymerization)|go:"GO:0042729"(DASH complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044732"(mitotic spindle pole body)|go:"GO:0051301"(cell division)|go:"GO:0051987"(positive regulation of attachment of spindle microtubules to kinetochore)|go:"GO:1990537"(mitotic spindle polar microtubule)|go:"GO:1990758"(mitotic sister chromatid biorientation)|interpro:IPR013962(DASH complex, subunit Dam1) refseq:NP_011454.1|sgd:S000003029|dip:DIP-1287N|mint:P53168|ensemblfungi:YGL061C(gene)|ensemblfungi:YGL061C_mRNA(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000922"(spindle pole)|go:"GO:0005737"(cytoplasm)|go:"GO:0005874"(microtubule)|go:"GO:0008608"(attachment of spindle microtubules to kinetochore)|go:"GO:0031116"(positive regulation of microtubule polymerization)|go:"GO:0042729"(DASH complex)|go:"GO:0051301"(cell division)|go:"GO:0051987"(positive regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0072686"(mitotic spindle)|interpro:IPR013960(DASH complex, subunit Duo1) - crc64:F02DB6EE09BC2284 crc64:787F8AF869E3C978 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:1U/NNQaGUzoddr+E0JlnygELpCc559292 rogid:uD838V20+p0YnjGgph8EZsT8/VE559292 intact-crc:E7DBF3B73AAB295A|rigid:QA5zUpNhJ0eTNotL/DXWYEpzYAQ false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P52286 uniprotkb:P24814 intact:EBI-4090|uniprotkb:Q07186|uniprotkb:D6VSW0|ensemblfungi:YDR328C intact:EBI-7898|uniprotkb:D6VWQ8|ensemblfungi:YJR090C psi-mi:skp1_yeast(display_long)|uniprotkb:SKP1(gene name)|psi-mi:SKP1(display_short)|uniprotkb:CBF3D(gene name synonym)|uniprotkb:YDR328C(locus name)|uniprotkb:D9798.14(orf name)|uniprotkb:Centromere DNA-binding protein complex CBF3 subunit D(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit SKP1(gene name synonym) psi-mi:grr1_yeast(display_long)|uniprotkb:GRR1(gene name)|psi-mi:GRR1(display_short)|uniprotkb:CAT80(gene name synonym)|uniprotkb:COT2(gene name synonym)|uniprotkb:YJR090C(locus name)|uniprotkb:J1885(orf name)|uniprotkb:F-box and leucine-rich repeat protein GRR1(gene name synonym)|uniprotkb:F-box/LRR-repeat protein GRR1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472770|imex:IM-18537-55 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002736|refseq:NP_010615.3|dip:DIP-1236N|mint:P52286|ensemblfungi:YDR328C(gene)|ensemblfungi:YDR328C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000776"(kinetochore)|go:"GO:0000921"(septin ring assembly)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0010458"(exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031518"(CBF3 complex)|go:"GO:0034622"|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043291"(RAVE complex)|go:"GO:0045116"(protein neddylation)|go:"GO:0051382"(kinetochore assembly)|go:"GO:0097602"(cullin family protein binding)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:1NEX|rcsb pdb:3MKS|rcsb pdb:3V7D|rcsb pdb:5AN3|rcsb pdb:6F07|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79|reactome:R-SCE-174113|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 refseq:NP_012623.1|sgd:S000003850|mint:P24814|dip:DIP-1626N|ensemblfungi:YJR090C(gene)|ensemblfungi:YJR090C_mRNA(transcript)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000751"(mitotic cell cycle G1 arrest in response to pheromone)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0016020"(membrane)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0071406"(cellular response to methylmercury)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR006553(Leucine-rich repeat, cysteine-containing subtype)|interpro:IPR032675|reactome:R-SCE-163210|reactome:R-SCE-8949613 - crc64:746DDE6470A69432 crc64:6BB6C46611E6F825 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:HO5Uz+KzzWNBubxoXRDNTVi8eIA559292 rogid:0s/WFupjCQeASvFVM+A9mSskzXY559292 intact-crc:524903A74B6F23BA|rigid:K572kX5OuH8dsR6ieqSdk5FdtRI false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12248 uniprotkb:P53267 intact:EBI-35662|uniprotkb:D6VS02|ensemblfungi:YDR016C intact:EBI-23268|uniprotkb:Q9P422|uniprotkb:D6VUP6|ensemblfungi:YGR113W psi-mi:dad1_yeast(display_long)|uniprotkb:DAD1(gene name)|psi-mi:DAD1(display_short)|uniprotkb:Outer kinetochore protein DAD1(gene name synonym)|uniprotkb:DUO1 and DAM1-interacting protein 1(gene name synonym)|uniprotkb:YDR016C(locus name) psi-mi:dam1_yeast(display_long)|uniprotkb:YGR113W(locus name)|uniprotkb:G6153(orf name)|uniprotkb:DAM1(gene name)|psi-mi:DAM1(display_short)|uniprotkb:Outer kinetochore protein DAM1(gene name synonym)|uniprotkb:DUO1 and MPS1-interacting protein 1(gene name synonym)|uniprotkb:Kinetochore assembly protein DAM1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472792|imex:IM-18537-57 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010299.3|sgd:S000002423|mint:Q12248|dip:DIP-1296N|ensemblfungi:YDR016C(gene)|ensemblfungi:YDR016C_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005876"(spindle microtubule)|go:"GO:0007052"(mitotic spindle organization)|go:"GO:0008608"(attachment of spindle microtubules to kinetochore)|go:"GO:0031116"(positive regulation of microtubule polymerization)|go:"GO:0042729"(DASH complex)|go:"GO:0044732"(mitotic spindle pole body)|go:"GO:0051301"(cell division)|go:"GO:0051987"(positive regulation of attachment of spindle microtubules to kinetochore)|go:"GO:0072686"(mitotic spindle)|interpro:IPR013958(DASH complex, subunit Dad1) sgd:S000003345|refseq:NP_011628.4|dip:DIP-1286N|mint:P53267|ensemblfungi:YGR113W(gene)|ensemblfungi:YGR113W_mRNA(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0008608"(attachment of spindle microtubules to kinetochore)|go:"GO:0031116"(positive regulation of microtubule polymerization)|go:"GO:0042729"(DASH complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044732"(mitotic spindle pole body)|go:"GO:0051301"(cell division)|go:"GO:0051987"(positive regulation of attachment of spindle microtubules to kinetochore)|go:"GO:1990537"(mitotic spindle polar microtubule)|go:"GO:1990758"(mitotic sister chromatid biorientation)|interpro:IPR013962(DASH complex, subunit Dam1) - - crc64:F02DB6EE09BC2284 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:O4sweJgAwu2RXAIvV8y0yNSAc+E559292 rogid:1U/NNQaGUzoddr+E0JlnygELpCc559292 intact-crc:A23D4076E313290E|rigid:oJy/jfvU6g0Z8Iy2ssMh3hJO5oY false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P15891 uniprotkb:P53933 intact:EBI-2036|uniprotkb:D6VR88|ensemblfungi:YCR088W intact:EBI-28798|uniprotkb:D6W186|ensemblfungi:YNL094W psi-mi:abp1_yeast(display_long)|uniprotkb:ABP1(gene name)|psi-mi:ABP1(display_short)|uniprotkb:YCR88W(orf name)|uniprotkb:YCR088W(locus name) psi-mi:app1_yeast(display_long)|uniprotkb:APP1(gene name)|psi-mi:APP1(display_short)|uniprotkb:Actin patch protein 1(gene name synonym)|uniprotkb:N2219(orf name)|uniprotkb:YNL094W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472803|imex:IM-18537-58 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000000684|refseq:NP_010012.1|dip:DIP-534N|mint:P15891|ensemblfungi:YCR088W(gene)|ensemblfungi:YCR088W_mRNA(transcript)|go:"GO:0000147"(actin cortical patch assembly)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0005938"(cell cortex)|go:"GO:0030427"(site of polarized growth)|go:"GO:0030479"(actin cortical patch)|go:"GO:0030833"(regulation of actin filament polymerization)|go:"GO:0030864"(cortical actin cytoskeleton)|go:"GO:0043332"(mating projection tip)|go:"GO:0044379"(protein localization to actin cortical patch)|go:"GO:0051015"(actin filament binding)|go:"GO:0051016"(barbed-end actin filament capping)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR001452(Src homology-3)|interpro:IPR002108(Actin-binding, cofilin/tropomyosin type)|interpro:IPR029006|interpro:IPR035718|interpro:IPR036028|rcsb pdb:1HQZ|rcsb pdb:1JO8|rcsb pdb:2K3B|rcsb pdb:2RPN|reactome:R-SCE-6798695|reactome:R-SCE-8856828|reactome:R-SCE-9013405 refseq:NP_014305.1|sgd:S000005038|dip:DIP-2006N|mint:P53933|ensemblfungi:YNL094W(gene)|ensemblfungi:YNL094W_mRNA(transcript)|go:"GO:0008195"(phosphatidate phosphatase activity)|go:"GO:0030479"(actin cortical patch)|go:"GO:0044255"(cellular lipid metabolic process)|interpro:IPR017210(Uncharacterised conserved protein UCP037464, actin patch protein 1)|interpro:IPR019236 - crc64:39523510704D94AA crc64:B85C525548BA34BC figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:GNPpMO8tuHFODmA3UzxSuTpdqZY559292 rogid:4ORrWVN2DOL+59LI2qWcKYYVfcE559292 intact-crc:0E13EBE01457926E|rigid:ljbOWXc1ngRbta/Jkz5jwakdxw0 false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P67266 uniprotkb:P63957 intact:EBI-6472841|ensemblbacteria:AAK75213|uniprotkb:Q97QU7 intact:EBI-6472833|ensemblbacteria:AAK76228|uniprotkb:Q97N84 psi-mi:y1102_strpn(display_long)|uniprotkb:SP_1102(locus name) psi-mi:dltc_strpn(display_long)|uniprotkb:dltC(gene name)|psi-mi:dltC(display_short)|uniprotkb:"D-alanine--poly(phosphoribitol) ligase subunit 2"(gene name synonym)|uniprotkb:SP_2174(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472838|imex:IM-18537-60 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005737"(cytoplasm)|go:"GO:0043590"(bacterial nucleoid)|ensemblbacteria:AAK75213(transcript)|ensemblbacteria:SP_1102(gene)|go:"GO:0003677"(DNA binding)|refseq:WP_000981526.1|interpro:IPR004401(Conserved hypothetical protein CHP00103)|interpro:IPR036894 go:"GO:0036370"(D-alanyl carrier activity)|go:"GO:0070395"(lipoteichoic acid biosynthetic process)|go:"GO:0071555"(cell wall organization)|ensemblbacteria:AAK76228(transcript)|ensemblbacteria:SP_2174(gene)|go:"GO:0005737"(cytoplasm)|refseq:WP_000351967.1|interpro:IPR003230(D-alanyl carrier protein)|interpro:IPR009081(Acyl carrier protein-like)|interpro:IPR036736 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zkmDL6X+WUQcVwmVBU0jbLhLZME170187 rogid:vudit4V6Ufh/KGeN121qo8PUn/4170187 intact-crc:FE8A0679860B8F04|rigid:tnEABLs0k8in79bNIzL91ud5c14 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR43 uniprotkb:P63895 intact:EBI-6472822|ensemblbacteria:AAK75681 intact:EBI-6472817|ensemblbacteria:AAK75642|uniprotkb:Q97PP8 psi-mi:a0a0h2ur43_strpn(display_long)|uniprotkb:SP_1597(locus name) psi-mi:dapb_strpn(display_long)|uniprotkb:SP_1555(locus name)|uniprotkb:dapB(gene name)|psi-mi:dapB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472814|imex:IM-18537-59 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75681(transcript)|ensemblbacteria:SP_1597(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009825(Protein of unknown function DUF1393)|uniprotkb:Q97PL2(uniprot-removed-ac)|refseq:WP_000814978.1 ensemblbacteria:AAK75642(transcript)|ensemblbacteria:SP_1555(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0008839"(4-hydroxy-tetrahydrodipicolinate reductase)|go:"GO:0009089"(lysine biosynthetic process via diaminopimelate)|go:"GO:0016726"(oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor)|go:"GO:0019877"(diaminopimelate biosynthetic process)|go:"GO:0050661"(NADP binding)|go:"GO:0051287"(NAD binding)|refseq:WP_000027902.1|interpro:IPR000846(Dihydrodipicolinate reductase)|interpro:IPR022663|interpro:IPR022664|interpro:IPR023940|interpro:IPR036291 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KdjbhnhJnJOWNnnpkqeEFvk2Fos170187 rogid:wm2DwSncIn/5KgLYNFymGHiOIVE170187 intact-crc:67932B4CEA3ADBE7|rigid:Yvx80d7z+fV5FtD248Z2RgFzpME false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P65779 uniprotkb:Q97PW7 intact:EBI-6472853|ensemblbacteria:AAK75210|uniprotkb:Q97QV0 intact:EBI-6472858|ensemblbacteria:AAK75567 psi-mi:nadk_strpn(display_long)|uniprotkb:nadK(gene name)|psi-mi:nadK(display_short)|uniprotkb:ATP-dependent NAD kinase(gene name synonym)|uniprotkb:SP_1098(locus name) psi-mi:y1473_strpn(display_long)|uniprotkb:SP_1473(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472861|imex:IM-18537-61 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75210(transcript)|ensemblbacteria:SP_1098(gene)|go:"GO:0003951"(NAD+ kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006741"(NADP biosynthetic process)|go:"GO:0019674"(NAD metabolic process)|go:"GO:0046872"(metal ion binding)|refseq:WP_000799053.1|interpro:IPR002504(ATP-NAD/AcoX kinase)|interpro:IPR016064(ATP-NAD kinase, PpnK-type)|interpro:IPR017437(ATP-NAD kinase, PpnK-type, all-beta)|interpro:IPR017438(ATP-NAD kinase, PpnK-type, alpha/beta) ensemblbacteria:SP_1473(gene)|go:"GO:0005737"(cytoplasm)|ensemblbacteria:AAK75567(transcript)|refseq:WP_000371287.1|interpro:IPR009242(Protein of unknown function DUF896, bacterial) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:b9eGU1RHSKd61onm2z70tQmF7u0170187 rogid:0oMC5zLFHDh7Ibw6aksxKXKCfgs170187 intact-crc:CC849FE897DEDB70|rigid:Zg0gsqlgWjf8Hahw29NA4lLfu4o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URN5 uniprotkb:P66444 intact:EBI-6472880|ensemblbacteria:AAK76012 intact:EBI-6472875|ensemblbacteria:AAK74913|uniprotkb:Q97RM8 psi-mi:a0a0h2urn5_strpn(display_long)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein TsaE(gene name synonym)|uniprotkb:SP_1944(locus name) psi-mi:rs16_strpn(display_long)|uniprotkb:SP_0775(locus name)|uniprotkb:rpsP(gene name)|psi-mi:rpsP(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472872|imex:IM-18537-62 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76012(transcript)|ensemblbacteria:SP_1944(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005737"(cytoplasm)|interpro:IPR003442(Protein of unknown function UPF0079, ATPase bacteria)|interpro:IPR027417|uniprotkb:Q97NS3(uniprot-removed-ac)|refseq:WP_000288232.1 ensemblbacteria:AAK74913(transcript)|ensemblbacteria:SP_0775(gene)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|refseq:WP_000268761.1|interpro:IPR000307(Ribosomal protein S16)|interpro:IPR023803 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:khiDo+1gWdvZO3BS9UeuWzDR9AU170187 rogid:WYe3wO5LkcVwpvlh/EUzuROakAM170187 intact-crc:F6F2033706BD7000|rigid:wW8q/91AhI2xWNjwJfa/PocSpCE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P63957 uniprotkb:P67266 intact:EBI-6472833|ensemblbacteria:AAK76228|uniprotkb:Q97N84 intact:EBI-6472841|ensemblbacteria:AAK75213|uniprotkb:Q97QU7 psi-mi:dltc_strpn(display_long)|uniprotkb:dltC(gene name)|psi-mi:dltC(display_short)|uniprotkb:"D-alanine--poly(phosphoribitol) ligase subunit 2"(gene name synonym)|uniprotkb:SP_2174(locus name) psi-mi:y1102_strpn(display_long)|uniprotkb:SP_1102(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472891|imex:IM-18537-63 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0036370"(D-alanyl carrier activity)|go:"GO:0070395"(lipoteichoic acid biosynthetic process)|go:"GO:0071555"(cell wall organization)|ensemblbacteria:AAK76228(transcript)|ensemblbacteria:SP_2174(gene)|go:"GO:0005737"(cytoplasm)|refseq:WP_000351967.1|interpro:IPR003230(D-alanyl carrier protein)|interpro:IPR009081(Acyl carrier protein-like)|interpro:IPR036736 go:"GO:0005737"(cytoplasm)|go:"GO:0043590"(bacterial nucleoid)|ensemblbacteria:AAK75213(transcript)|ensemblbacteria:SP_1102(gene)|go:"GO:0003677"(DNA binding)|refseq:WP_000981526.1|interpro:IPR004401(Conserved hypothetical protein CHP00103)|interpro:IPR036894 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:vudit4V6Ufh/KGeN121qo8PUn/4170187 rogid:zkmDL6X+WUQcVwmVBU0jbLhLZME170187 intact-crc:161082B1C465AFA6|rigid:tnEABLs0k8in79bNIzL91ud5c14 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQR2 uniprotkb:P67382 intact:EBI-6472939|ensemblbacteria:AAK75595 intact:EBI-6472934|ensemblbacteria:AAK74418|uniprotkb:Q97ST5|uniprotkb:Q8DRD3 psi-mi:a0a0h2uqr2_strpn(display_long)|uniprotkb:SP_1504(locus name) psi-mi:y238_strpn(display_long)|uniprotkb:SP_0238(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472931|imex:IM-18537-66 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75595(transcript)|ensemblbacteria:SP_1504(gene)|refseq:WP_001808661.1|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR019734|uniprotkb:Q97PU0(uniprot-removed-ac) interpro:IPR002912(Amino acid-binding ACT)|ensemblbacteria:AAK74418(transcript)|ensemblbacteria:SP_0238(gene)|refseq:WP_000644124.1|interpro:IPR022986|rcsb pdb:1ZPV - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:sgVgzFuyTcGJKABREEoxEy9jg+k170187 rogid:M+kl9418slnFTHQ7oyTMmv/uc+M170187 intact-crc:54E2C512AEDD8462|rigid:3l/eEGNbcS0ON9JHmdKHUCI9Zbo false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB1 uniprotkb:P67330 intact:EBI-6472917|ensemblbacteria:AAK75366|ensemblbacteria:AAK75538|ensemblbacteria:AAK75771 intact:EBI-6472913|ensemblbacteria:AAK74282|uniprotkb:Q97T60 psi-mi:a0a0h2uqb1_strpn(display_long)|uniprotkb:SP_1262(locus name)|uniprotkb:SP_1444(locus name)|uniprotkb:SP_1692(locus name) psi-mi:trho_strpn(display_long)|uniprotkb:trhO(gene name)|psi-mi:trhO(display_short)|uniprotkb:tRNA hydroxylation protein O(gene name synonym)|uniprotkb:SP_0095(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472920|imex:IM-18537-65 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75366(transcript)|ensemblbacteria:AAK75538(transcript)|ensemblbacteria:AAK75771(transcript)|ensemblbacteria:SP_1262(gene)|ensemblbacteria:SP_1444(gene)|ensemblbacteria:SP_1692(gene)|interpro:IPR032877|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97CV3(uniprot-removed-ac)|refseq:WP_000436399.1 ensemblbacteria:AAK74282(transcript)|ensemblbacteria:SP_0095(gene)|go:"GO:0006400"(tRNA modification)|go:"GO:0016705"(oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen)|interpro:IPR040503|refseq:WP_001030031.1|interpro:IPR001763(Rhodanese-like)|interpro:IPR020936|interpro:IPR022111|interpro:IPR036873 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mKXRtGOe/klxDYsCGGS4XRQ7NrM170187 rogid:7ccMUviJnVXFy4RHhU24TD2efqg170187 intact-crc:0937EB84FC9D7911|rigid:qj5mE/iBjiggPty3c5MmrAFNniI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P67266 uniprotkb:P63957 intact:EBI-6472841|ensemblbacteria:AAK75213|uniprotkb:Q97QU7 intact:EBI-6472833|ensemblbacteria:AAK76228|uniprotkb:Q97N84 psi-mi:y1102_strpn(display_long)|uniprotkb:SP_1102(locus name) psi-mi:dltc_strpn(display_long)|uniprotkb:dltC(gene name)|psi-mi:dltC(display_short)|uniprotkb:"D-alanine--poly(phosphoribitol) ligase subunit 2"(gene name synonym)|uniprotkb:SP_2174(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472902|imex:IM-18537-64 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005737"(cytoplasm)|go:"GO:0043590"(bacterial nucleoid)|ensemblbacteria:AAK75213(transcript)|ensemblbacteria:SP_1102(gene)|go:"GO:0003677"(DNA binding)|refseq:WP_000981526.1|interpro:IPR004401(Conserved hypothetical protein CHP00103)|interpro:IPR036894 go:"GO:0036370"(D-alanyl carrier activity)|go:"GO:0070395"(lipoteichoic acid biosynthetic process)|go:"GO:0071555"(cell wall organization)|ensemblbacteria:AAK76228(transcript)|ensemblbacteria:SP_2174(gene)|go:"GO:0005737"(cytoplasm)|refseq:WP_000351967.1|interpro:IPR003230(D-alanyl carrier protein)|interpro:IPR009081(Acyl carrier protein-like)|interpro:IPR036736 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zkmDL6X+WUQcVwmVBU0jbLhLZME170187 rogid:vudit4V6Ufh/KGeN121qo8PUn/4170187 intact-crc:ABE2660A80DA34D2|rigid:tnEABLs0k8in79bNIzL91ud5c14 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P87108 uniprotkb:P32830 intact:EBI-9115|ensemblfungi:YHR005C-A|uniprotkb:D3DKU9 intact:EBI-11303|uniprotkb:D6VQ92|ensemblfungi:YBR091C psi-mi:tim10_yeast(display_long)|uniprotkb:MRS11(gene name synonym)|uniprotkb:YHR005BC(orf name)|uniprotkb:YHR005C-A(locus name)|uniprotkb:TIM10(gene name)|psi-mi:TIM10(display_short)|uniprotkb:Mitochondrial intermembrane protein MRS11(gene name synonym) psi-mi:tim12_yeast(display_long)|uniprotkb:TIM12(gene name)|psi-mi:TIM12(display_short)|uniprotkb:Mitochondrial regulator of splicing 5(gene name synonym)|uniprotkb:MRS5(gene name synonym)|uniprotkb:YBR0812(orf name)|uniprotkb:YBR091C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472950|imex:IM-18537-67 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YHR005C-A(gene)|ensemblfungi:YHR005C-A_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0042719"(mitochondrial intermembrane space protein transporter complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0140318"(protein transporter activity)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027100|interpro:IPR035427|rcsb pdb:3DXR|rcsb pdb:6LO8|reactome:R-SCE-1268020|refseq:NP_011869.1|sgd:S000003530|dip:DIP-1141N|mint:P87108 ensemblfungi:YBR091C(gene)|ensemblfungi:YBR091C_mRNA(transcript)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0042721"(TIM22 mitochondrial import inner membrane insertion complex)|go:"GO:0045039"(protein insertion into mitochondrial inner membrane)|go:"GO:0046872"(metal ion binding)|go:"GO:0071806"(protein transmembrane transport)|interpro:IPR004217(Zinc finger, Tim10/DDP-type)|interpro:IPR027102|interpro:IPR035427|rcsb pdb:6LO8|go:"GO:0005758"(mitochondrial intermembrane space)|refseq:NP_009649.1|sgd:S000000295|dip:DIP-1140N - crc64:70DD4764B944FF17 crc64:2C4B7DEE9695866D figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:3AGstULCT5EBmHEk0EGsz9Rk9YA559292 rogid:3ABFY/s+od9+IAzJ30g58aElg5s559292 intact-crc:820C82DED226624F|rigid:kKYx/hv/Hr3rCu8gGS5813KdEIk false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P38736 uniprotkb:Q01590 intact:EBI-24365|uniprotkb:D3DKT7|ensemblfungi:YHL031C intact:EBI-16930|uniprotkb:D6VY28|ensemblfungi:YLR026C psi-mi:gosr1_yeast(display_long)|uniprotkb:Golgi SNARE protein 1(gene name synonym)|uniprotkb:GOS1(gene name)|psi-mi:GOS1(display_short)|uniprotkb:Protein transport protein GOS1(gene name synonym)|uniprotkb:YHL031C(locus name) psi-mi:sed5_yeast(display_long)|uniprotkb:SED5(gene name)|psi-mi:SED5(display_short)|uniprotkb:YLR026C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472961|imex:IM-18537-68 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011832.1|sgd:S000001023|reactome:R-SCE-6811438|dip:DIP-2490N|reactome:R-SCE-6807878|ensemblfungi:YHL031C(gene)|ensemblfungi:YHL031C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005797"(Golgi medial cisterna)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0015031"(protein transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031201"(SNARE complex)|go:"GO:0048193"(Golgi vesicle transport)|go:"GO:0048209"(regulation of vesicle targeting, to, from or within Golgi)|interpro:IPR023601|go:"GO:0006906"(vesicle fusion) refseq:NP_013126.1|sgd:S000004016|ensemblfungi:YLR026C(gene)|ensemblfungi:YLR026C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000149"(SNARE binding)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0006906"(vesicle fusion)|go:"GO:0090083"(regulation of inclusion body assembly)|interpro:IPR000727(Target SNARE coiled-coil region)|interpro:IPR006012(Syntaxin/epimorphin, conserved site)|interpro:IPR010989(t-SNARE)|interpro:IPR021538|rcsb pdb:1MQS|rcsb pdb:1PD0|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|reactome:R-SCE-204005|reactome:R-SCE-5694530|reactome:R-SCE-6807878|reactome:R-SCE-6811438|reactome:R-SCE-9609523|go:"GO:0031201"(SNARE complex)|go:"GO:0048278"(vesicle docking)|go:"GO:0048280"(vesicle fusion with Golgi apparatus)|dip:DIP-2489N|mint:Q01590 - - crc64:B3192B57269A0B83 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:pAzDzV46XXzIOB4p/oc1PlMc54E559292 rogid:c+W+86qfjxcvWWJ9nMScyH5TjNA559292 intact-crc:01511F10720FFE41|rigid:+CUI1lMi8iVFGHcw+IxefletQlY false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q01590 uniprotkb:P22214 intact:EBI-16930|uniprotkb:D6VY28|ensemblfungi:YLR026C intact:EBI-16577|ensemblfungi:YLR268W|uniprotkb:D6VYR6 psi-mi:sed5_yeast(display_long)|uniprotkb:SED5(gene name)|psi-mi:SED5(display_short)|uniprotkb:YLR026C(locus name) psi-mi:sec22_yeast(display_long)|uniprotkb:SEC22(gene name)|psi-mi:SEC22(display_short)|uniprotkb:SLY2(gene name synonym)|uniprotkb:YLR268W(locus name)|uniprotkb:L8479.3(orf name)|uniprotkb:TSL26(gene name synonym)|uniprotkb:Suppressor of loss of YPT1 protein 2(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472972|imex:IM-18537-69 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013126.1|sgd:S000004016|ensemblfungi:YLR026C(gene)|ensemblfungi:YLR026C_mRNA(transcript)|go:"GO:0000139"(Golgi membrane)|go:"GO:0000149"(SNARE binding)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005801"(cis-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0006906"(vesicle fusion)|go:"GO:0090083"(regulation of inclusion body assembly)|interpro:IPR000727(Target SNARE coiled-coil region)|interpro:IPR006012(Syntaxin/epimorphin, conserved site)|interpro:IPR010989(t-SNARE)|interpro:IPR021538|rcsb pdb:1MQS|rcsb pdb:1PD0|go:"GO:0012505"(endomembrane system)|go:"GO:0016021"(integral component of membrane)|reactome:R-SCE-204005|reactome:R-SCE-5694530|reactome:R-SCE-6807878|reactome:R-SCE-6811438|reactome:R-SCE-9609523|go:"GO:0031201"(SNARE complex)|go:"GO:0048278"(vesicle docking)|go:"GO:0048280"(vesicle fusion with Golgi apparatus)|dip:DIP-2489N|mint:Q01590 refseq:NP_013370.1|sgd:S000004258|ensemblfungi:YLR268W(gene)|ensemblfungi:YLR268W_mRNA(transcript)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005793"(endoplasmic reticulum-Golgi intermediate compartment)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006890"(retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum)|go:"GO:0006906"(vesicle fusion)|go:"GO:0012507"(ER to Golgi transport vesicle membrane)|go:"GO:0015031"(protein transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031201"(SNARE complex)|go:"GO:0048279"(vesicle fusion with endoplasmic reticulum)|go:"GO:0048280"(vesicle fusion with Golgi apparatus)|interpro:IPR001388(Synaptobrevin)|interpro:IPR010908(Longin)|interpro:IPR011012(Longin-like)|interpro:IPR042855|interpro:IPR044565|go:"GO:0000139"(Golgi membrane)|reactome:R-SCE-204005|reactome:R-SCE-5694530|reactome:R-SCE-6811434|dip:DIP-2234N - crc64:B3192B57269A0B83 crc64:9FA3E34EAAFB9536 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:c+W+86qfjxcvWWJ9nMScyH5TjNA559292 rogid:TjDU0GL+v84S+TwvRpJmF9CqhZ4559292 intact-crc:12D62C0ED36FDCD6|rigid:hgs3i5RoBVeg4Ec6D5vKoPgOfmk false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P0CS90 uniprotkb:Q01852 intact:EBI-8637|uniprotkb:D6VWL6|uniprotkb:P12398|ensemblfungi:YJR045C intact:EBI-9141|ensemblfungi:YIL022W|uniprotkb:D6VVQ7 psi-mi:hsp77_yeast(display_long)|uniprotkb:ENS1(gene name synonym)|uniprotkb:SSC1(gene name)|psi-mi:SSC1(display_short)|uniprotkb:YJR045C(locus name)|uniprotkb:J1639(orf name)|uniprotkb:mtHSP70(gene name synonym)|uniprotkb:Endonuclease SceI 75 kDa subunit(gene name synonym) psi-mi:tim44_yeast(display_long)|uniprotkb:ISP45(gene name synonym)|uniprotkb:MIM44(gene name synonym)|uniprotkb:MPI1(gene name synonym)|uniprotkb:YIL022W(locus name)|uniprotkb:TIM44(gene name)|psi-mi:TIM44(display_short)|uniprotkb:Mitochondrial protein import protein 1(gene name synonym)|uniprotkb:Inner membrane import site protein 45(gene name synonym)|uniprotkb:Membrane import machinery protein MIM44(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472983|imex:IM-18537-70 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000003806|refseq:NP_012579.1|interpro:IPR012725(Chaperone DnaK)|interpro:IPR013126(Heat shock protein 70)|interpro:IPR018181|interpro:IPR029047|interpro:IPR029048|mint:P0CS90|interpro:IPR043129|ensemblfungi:YJR045C(gene)|ensemblfungi:YJR045C_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0008566"(mitochondrial protein-transporting ATPase activity)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030234"(enzyme regulator activity)|go:"GO:0031072"(heat shock protein binding)|go:"GO:0032079"(positive regulation of endodeoxyribonuclease activity)|go:"GO:0034620"(cellular response to unfolded protein)|go:"GO:0042026"(protein refolding)|go:"GO:0042645"(mitochondrial nucleoid)|go:"GO:0043335"(protein unfolding)|go:"GO:0044183"(protein folding chaperone)|go:"GO:0051082"(unfolded protein binding)|go:"GO:0051085"(chaperone cofactor-dependent protein refolding)|go:"GO:0051787"(misfolded protein binding)|go:"GO:0140603"(obsolete ATP hydrolysis activity) go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005744"(TIM23 mitochondrial import inner membrane translocase complex)|go:"GO:0030150"(protein import into mitochondrial matrix)|ensemblfungi:YIL022W(gene)|ensemblfungi:YIL022W_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0031314"(extrinsic component of mitochondrial inner membrane)|go:"GO:0051087"(chaperone binding)|interpro:IPR007379(Mitochondrial import inner membrane translocase, subunit Tim44)|interpro:IPR017303(Import inner membrane translocase, TIM44 subunit, mitochondria)|interpro:IPR032710|interpro:IPR039544|rcsb pdb:2FXT|rcsb pdb:3QK9|go:"GO:0030674"(protein-macromolecule adaptor activity)|refseq:NP_012242.1|sgd:S000001284|dip:DIP-694N|mint:Q01852 - caution:This sequence has been withdrawn from Uniprot.|crc64:1E5672E76FCE24AC crc64:8E98C738178B1E44 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jwa3ppE0voBqzfZAuY/E52tYrrw559292 rogid:/9nt+hEgng/Nt6o0wXvFO11yXCg559292 intact-crc:FE2AD3286B132952|rigid:KtV+Ey/ZiT6dZYQvjSi5moglVlA false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q03497 uniprotkb:P19073 intact:EBI-18285|uniprotkb:D3DKQ8|ensemblfungi:YHL007C intact:EBI-4274|uniprotkb:Q05978|uniprotkb:D6VYN1|ensemblfungi:YLR229C psi-mi:ste20_yeast(display_long)|uniprotkb:STE20(gene name)|psi-mi:STE20(display_short)|uniprotkb:YHL007C(locus name) psi-mi:cdc42_yeast(display_long)|uniprotkb:CDC42(gene name)|psi-mi:CDC42(display_short)|uniprotkb:SRO2(gene name synonym)|uniprotkb:YLR229C(locus name)|uniprotkb:L8083.13(orf name)|uniprotkb:Suppressor of RHO3 protein 2(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473016|imex:IM-18537-73 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011856.1|sgd:S000000999|ensemblfungi:YHL007C(gene)|ensemblfungi:YHL007C_mRNA(transcript)|go:"GO:0000011"(vacuole inheritance)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000282"(cellular bud site selection)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001402"(signal transduction involved in filamentous growth)|reactome:R-SCE-389359|interpro:IPR036936|reactome:R-SCE-5627123|reactome:R-SCE-5687128|reactome:R-SCE-9013405|reactome:R-SCE-9013406|rcsb pdb:2KYM|rcsb pdb:2LCS|rcsb pdb:2RQW|reactome:R-SCE-2029482|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003729"(mRNA binding)|go:"GO:0004672"(protein kinase activity)|go:"GO:0004674"(protein serine/threonine kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0007118"(budding cell apical bud growth)|go:"GO:0007121"(bipolar cellular bud site selection)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0007232"(osmosensory signaling pathway via Sho1 osmosensor)|go:"GO:0010468"(regulation of gene expression)|go:"GO:0010629"(negative regulation of gene expression)|go:"GO:0019899"(enzyme binding)|go:"GO:0032147"(activation of protein kinase activity)|go:"GO:0034063"(stress granule assembly)|go:"GO:0035376"(sterol import)|go:"GO:0035404"(histone-serine phosphorylation)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0043065"(positive regulation of apoptotic process)|go:"GO:0043332"(mating projection tip)|go:"GO:0043408"(regulation of MAPK cascade)|go:"GO:0044025"("histone kinase activity (H2B-S14 specific)")|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000095(PAK-box/P21-Rho-binding)|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR033923|dip:DIP-712N|mint:Q03497 dip:DIP-862N|refseq:NP_013330.1|sgd:S000004219|mint:P19073|ensemblfungi:YLR229C(gene)|ensemblfungi:YLR229C_mRNA(transcript)|go:"GO:0000131"(incipient cellular bud site)|go:"GO:0000329"(fungal-type vacuole membrane)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0000750"(pheromone-dependent signal transduction involved in conjugation with cellular fusion)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0005934"(cellular bud tip)|go:"GO:0005935"(cellular bud neck)|go:"GO:0005940"(septin ring)|go:"GO:0006897"(endocytosis)|go:"GO:0007049"(cell cycle)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0007118"(budding cell apical bud growth)|go:"GO:0007119"(budding cell isotropic bud growth)|go:"GO:0007266"(Rho protein signal transduction)|go:"GO:0022604"(regulation of cell morphogenesis)|go:"GO:0030010"(establishment of cell polarity)|go:"GO:0030031"(cell projection assembly)|go:"GO:0031106"(septin ring organization)|go:"GO:0031384"(regulation of initiation of mating projection growth)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032488"(Cdc42 protein signal transduction)|go:"GO:0032889"(regulation of vacuole fusion, non-autophagic)|go:"GO:0043332"(mating projection tip)|go:"GO:0045921"(positive regulation of exocytosis)|go:"GO:0060178"(regulation of exocyst localization)|go:"GO:0071944"(cell periphery)|go:"GO:2000222"(positive regulation of pseudohyphal growth)|interpro:IPR001806(Ras GTPase)|interpro:IPR003578(Ras small GTPase, Rho type)|interpro:IPR005225(Small GTP-binding protein)|interpro:IPR027417|interpro:IPR037874|reactome:R-SCE-2029482|reactome:R-SCE-389359|reactome:R-SCE-5626467|reactome:R-SCE-5627123|reactome:R-SCE-5687128|reactome:R-SCE-9013148|reactome:R-SCE-9013406|reactome:R-SCE-9013409|reactome:R-SCE-983231 - crc64:69C1C12F5B87733C crc64:30BD644BA9836B2C figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ammX6PwJCeyVjNxJ2UJUBrZt9mM559292 rogid:4FDrNURFjSZOYUFf/dADXTpoMTc559292 intact-crc:297ADAF67F600E94|rigid:7L3BdeqLSKwAstxYPP8TnThrHa4 false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q02574 uniprotkb:P48581 intact:EBI-10658|uniprotkb:P87260|uniprotkb:Q05887|ensemblfungi:YLR288C|uniprotkb:D6VYT4 intact:EBI-14652|uniprotkb:D6W361|ensemblfungi:YOR368W psi-mi:mec3_yeast(display_long)|uniprotkb:MEC3(gene name)|psi-mi:MEC3(display_short)|uniprotkb:PIP3(gene name synonym)|uniprotkb:YLR288C(locus name)|uniprotkb:L8003.15(orf name)|uniprotkb:PSO9(gene name synonym) psi-mi:rad17_yeast(display_long)|uniprotkb:YOR368W(locus name)|uniprotkb:RAD17(gene name)|psi-mi:RAD17(display_short)|uniprotkb:DNA repair exonuclease RAD17(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473005|imex:IM-18537-72 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013391.1|sgd:S000004279|ensemblfungi:YLR288C(gene)|ensemblfungi:YLR288C_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0000722"(telomere maintenance via recombination)|go:"GO:0000723"(telomere maintenance)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003677"(DNA binding)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006348"|go:"GO:0030896"(checkpoint clamp complex)|go:"GO:0031573"(mitotic intra-S DNA damage checkpoint signaling)|go:"GO:0033314"(mitotic DNA replication checkpoint signaling)|go:"GO:0035861"(site of double-strand break)|go:"GO:0044778"(meiotic DNA integrity checkpoint signaling)|interpro:IPR007150(Hus1-like protein)|reactome:R-SCE-176187|mint:Q02574|dip:DIP-1432N refseq:NP_015013.1|sgd:S000005895|ensemblfungi:YOR368W(gene)|ensemblfungi:YOR368W_mRNA(transcript)|go:"GO:0000077"(DNA damage checkpoint signaling)|go:"GO:0003684"(damaged DNA binding)|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0004518"(nuclease activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0007131"(reciprocal meiotic recombination)|go:"GO:0030896"(checkpoint clamp complex)|interpro:IPR003021(Repair protein Rad1/Rec1)|interpro:IPR016587(Cell cycle checkpoint, RAD17)|reactome:R-SCE-176187|dip:DIP-1546N|mint:P48581 - crc64:4385CEFA9130FEA3 crc64:BFF7074676C483C9 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:LuYCya9O8z1Uw0xyfJnz3aowolg559292 rogid:U8Ccg8pUNM0qdbk/OZojYH4x4ig559292 intact-crc:2689EF714256D38A|rigid:zbfHmwWXE6qOlizqamDQwGaA5pw false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q01852 uniprotkb:P32897 intact:EBI-9141|ensemblfungi:YIL022W|uniprotkb:D6VVQ7 intact:EBI-9136|ensemblfungi:YNR017W|uniprotkb:D6W1J2 psi-mi:tim44_yeast(display_long)|uniprotkb:ISP45(gene name synonym)|uniprotkb:MIM44(gene name synonym)|uniprotkb:MPI1(gene name synonym)|uniprotkb:YIL022W(locus name)|uniprotkb:TIM44(gene name)|psi-mi:TIM44(display_short)|uniprotkb:Mitochondrial protein import protein 1(gene name synonym)|uniprotkb:Inner membrane import site protein 45(gene name synonym)|uniprotkb:Membrane import machinery protein MIM44(gene name synonym) psi-mi:tim23_yeast(display_long)|uniprotkb:MIM23(gene name synonym)|uniprotkb:MPI3(gene name synonym)|uniprotkb:N3180(orf name)|uniprotkb:YNR017W(locus name)|uniprotkb:TIM23(gene name)|psi-mi:TIM23(display_short)|uniprotkb:MAS6(gene name synonym)|uniprotkb:Mitochondrial protein import protein 3(gene name synonym)|uniprotkb:Mitochondrial protein import protein MAS6(gene name synonym)|uniprotkb:Membrane import machinery protein MIM23(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6472994|imex:IM-18537-71 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005744"(TIM23 mitochondrial import inner membrane translocase complex)|go:"GO:0030150"(protein import into mitochondrial matrix)|ensemblfungi:YIL022W(gene)|ensemblfungi:YIL022W_mRNA(transcript)|go:"GO:0001405"(PAM complex, Tim23 associated import motor)|go:"GO:0005524"(ATP binding)|go:"GO:0031314"(extrinsic component of mitochondrial inner membrane)|go:"GO:0051087"(chaperone binding)|interpro:IPR007379(Mitochondrial import inner membrane translocase, subunit Tim44)|interpro:IPR017303(Import inner membrane translocase, TIM44 subunit, mitochondria)|interpro:IPR032710|interpro:IPR039544|rcsb pdb:2FXT|rcsb pdb:3QK9|go:"GO:0030674"(protein-macromolecule adaptor activity)|refseq:NP_012242.1|sgd:S000001284|dip:DIP-694N|mint:Q01852 reactome:R-SCE-1268020|ensemblfungi:YNR017W(gene)|ensemblfungi:YNR017W_mRNA(transcript)|go:"GO:0005739"(mitochondrion)|go:"GO:0005743"(mitochondrial inner membrane)|go:"GO:0005744"(TIM23 mitochondrial import inner membrane translocase complex)|go:"GO:0005758"(mitochondrial intermembrane space)|go:"GO:0008320"(protein transmembrane transporter activity)|go:"GO:0030150"(protein import into mitochondrial matrix)|go:"GO:0030943"(mitochondrion targeting sequence binding)|go:"GO:0031305"(integral component of mitochondrial inner membrane)|interpro:IPR005681(Mitochondrial import inner membrane translocase, subunit Tim23)|refseq:NP_014414.3|sgd:S000005300|dip:DIP-2451N|mint:P32897 - crc64:8E98C738178B1E44 crc64:08E5AB4F400F675B figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:/9nt+hEgng/Nt6o0wXvFO11yXCg559292 rogid:nA6mnSq0Ek0I5g8LSJpLjojiRvc559292 intact-crc:0767E090D85AF499|rigid:scKH+HnSesRVWDV7iLuUHBxByrE false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P38302 uniprotkb:Q03654 intact:EBI-20921|uniprotkb:D6VQI3|ensemblfungi:YBR188C intact:EBI-476|uniprotkb:Q6B1D8|ensemblfungi:YMR213W|uniprotkb:D6W038 psi-mi:ntc20_yeast(display_long)|uniprotkb:YBR188C(locus name)|uniprotkb:YBR1316(orf name)|uniprotkb:NTC20(gene name)|psi-mi:NTC20(display_short)|uniprotkb:SNT384(gene name synonym)|uniprotkb:PRP19-associated complex protein 20(gene name synonym)|uniprotkb:Synergistic to PRP19 mutation protein 384(gene name synonym) psi-mi:cef1_yeast(display_long)|uniprotkb:CEF1(gene name)|psi-mi:CEF1(display_short)|uniprotkb:YMR213W(locus name)|uniprotkb:YM8261.07(orf name)|uniprotkb:NTC85(gene name synonym)|uniprotkb:PRP nineteen-associated complex protein 85(gene name synonym)|uniprotkb:PRP19-associated complex protein 85(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473038|imex:IM-18537-75 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009747.3|sgd:S000000392|mint:P38302|ensemblfungi:YBR188C(gene)|ensemblfungi:YBR188C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|dip:DIP-1683N refseq:NP_013940.1|sgd:S000004826|ensemblfungi:YMR213W(gene)|ensemblfungi:YMR213W_mRNA(transcript)|go:"GO:0000350"(generation of catalytic spliceosome for second transesterification step)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0003677"(DNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005737"(cytoplasm)|go:"GO:0071006"(U2-type catalytic step 1 spliceosome)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017930|interpro:IPR021786|rcsb pdb:5GM6|rcsb pdb:5GMK|rcsb pdb:5LJ3|rcsb pdb:5LJ5|rcsb pdb:5LQW|rcsb pdb:5MPS|rcsb pdb:5MQ0|rcsb pdb:5WSG|rcsb pdb:5Y88|rcsb pdb:5YLZ|rcsb pdb:6BK8|rcsb pdb:6EXN|rcsb pdb:6J6G|rcsb pdb:6J6H|rcsb pdb:6J6N|rcsb pdb:6J6Q|rcsb pdb:7DCO|dip:DIP-1113N|mint:Q03654 - crc64:15C5234B25213223 crc64:A4C417A8B330EA9C figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Ucc4R0lhhhAQfrsXvs+BtCnuJQg559292 rogid:AsbV7RtNk+8mCzLk2wZYqbULOFg559292 intact-crc:D65A900A818048FB|rigid:Ya+gSBltU+gN/RA2jOHuWWCUINo false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P15873 uniprotkb:Q03834 intact:EBI-12993|uniprotkb:D6VQ89|ensemblfungi:YBR088C intact:EBI-11383|ensemblfungi:YDR097C|uniprotkb:D6VS82 psi-mi:pcna_yeast(display_long)|uniprotkb:YBR0811(orf name)|uniprotkb:YBR088C(locus name)|uniprotkb:POL30(gene name)|psi-mi:POL30(display_short) psi-mi:msh6_yeast(display_long)|uniprotkb:MSH6(gene name)|psi-mi:MSH6(display_short)|uniprotkb:YDR097C(locus name)|uniprotkb:YD8557.04C(orf name)|uniprotkb:PMS3(gene name synonym)|uniprotkb:MutS protein homolog 6(gene name synonym)|uniprotkb:Postmeiotic segregation protein 3(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473049|imex:IM-18537-76 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_009645.1|sgd:S000000292|go:"GO:0043626"(PCNA complex)|go:"GO:0070987"(error-free translesion synthesis)|go:"GO:1902394"(positive regulation of exodeoxyribonuclease activity)|go:"GO:1903022"(positive regulation of phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands)|go:"GO:1905779"(positive regulation of exonuclease activity)|interpro:IPR000730(Proliferating cell nuclear antigen, PCNA)|interpro:IPR022648|interpro:IPR022649|interpro:IPR022659|rcsb pdb:1PLQ|rcsb pdb:1PLR|rcsb pdb:1SXJ|rcsb pdb:2OD8|rcsb pdb:3F1W|rcsb pdb:3GPM|rcsb pdb:3GPN|rcsb pdb:3L0W|rcsb pdb:4L6P|rcsb pdb:3L0X|rcsb pdb:3L10|rcsb pdb:4YHR|rcsb pdb:3PGE|rcsb pdb:3V60|rcsb pdb:3V61|rcsb pdb:3V62|rcsb pdb:5JNE|rcsb pdb:4L60|mint:P15873|dip:DIP-2417N|go:"GO:0035753"(maintenance of DNA trinucleotide repeats)|ensemblfungi:YBR088C(gene)|ensemblfungi:YBR088C_mRNA(transcript)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005657"(replication fork)|go:"GO:0006272"(leading strand elongation)|go:"GO:0006273"(lagging strand elongation)|go:"GO:0006275"(regulation of DNA replication)|go:"GO:0006289"(nucleotide-excision repair)|go:"GO:0006298"(mismatch repair)|go:"GO:0006301"(postreplication repair)|go:"GO:0006348"|go:"GO:0007064"(mitotic sister chromatid cohesion)|go:"GO:0019985"(translesion synthesis)|go:"GO:0030337"(DNA polymerase processivity factor activity)|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0034087"(establishment of mitotic sister chromatid cohesion)|go:"GO:0042802"(identical protein binding)|rcsb pdb:5T9D|rcsb pdb:5V7K|rcsb pdb:5V7M|rcsb pdb:5ZUT|rcsb pdb:6CX2|rcsb pdb:6CX3|rcsb pdb:6CX4|rcsb pdb:6D0Q|rcsb pdb:6D0R|rcsb pdb:6E49|rcsb pdb:6W9W|rcsb pdb:6WAC|reactome:R-SCE-110312|reactome:R-SCE-110320|reactome:R-SCE-4615885|reactome:R-SCE-5358565|reactome:R-SCE-5655862|reactome:R-SCE-5656121|reactome:R-SCE-5656169|reactome:R-SCE-6782135|reactome:R-SCE-69091|reactome:R-SCE-69166|reactome:R-SCE-69183|reactome:R-SCE-8866654|rcsb pdb:5V7L ensemblfungi:YDR097C(gene)|go:"GO:0030983"(mismatched DNA binding)|go:"GO:0032300"(mismatch repair complex)|go:"GO:0032301"(MutSalpha complex)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043111"(replication fork arrest)|go:"GO:0043570"(maintenance of DNA repeat elements)|go:"GO:0045910"(negative regulation of DNA recombination)|interpro:IPR000432(DNA mismatch repair protein MutS, C-terminal)|interpro:IPR007695(DNA mismatch repair protein MutS-like, N-terminal)|interpro:IPR007696(DNA mismatch repair protein MutS, core)|interpro:IPR007860(DNA mismatch repair protein MutS, connector)|ensemblfungi:YDR097C_mRNA(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|interpro:IPR007861(DNA mismatch repair protein MutS, clamp)|go:"GO:0005737"(cytoplasm)|go:"GO:0006290"(pyrimidine dimer repair)|go:"GO:0006298"(mismatch repair)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016887"(ATP hydrolysis activity)|interpro:IPR016151(DNA mismatch repair protein MutS, N-terminal)|interpro:IPR017261(DNA mismatch repair protein Msh6)|interpro:IPR027417|interpro:IPR036187|interpro:IPR036678|reactome:R-SCE-5358565|refseq:NP_010382.3|sgd:S000002504|mint:Q03834|dip:DIP-2423N - crc64:9B56C5851621DDDC crc64:11A6883AADCFA222 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:/+XSPV99OBBwBBC/nY0JiHaAeSI559292 rogid:IufLo1sfhfBnNLFLGR/VO5gkApI559292 intact-crc:4D647FB46F6D718D|rigid:zPOHSgGJIRm0mGBFAZWHUwek9UE false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P36149 uniprotkb:Q03630 intact:EBI-3567|uniprotkb:D6VXC9|ensemblfungi:YKR068C intact:EBI-3580|uniprotkb:D6W0K6|ensemblfungi:YML077W psi-mi:bet3_yeast(display_long)|uniprotkb:YKR068C(locus name)|uniprotkb:BET3(gene name)|psi-mi:BET3(display_short)|uniprotkb:Transport protein particle 22 kDa subunit(gene name synonym) psi-mi:bet5_yeast(display_long)|uniprotkb:YML077W(locus name)|uniprotkb:BET5(gene name)|psi-mi:BET5(display_short)|uniprotkb:Transport protein particle 18 kDa subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473027|imex:IM-18537-74 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012994.1|sgd:S000001776|dip:DIP-1710N|mint:P36149|ensemblfungi:YKR068C(gene)|ensemblfungi:YKR068C_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005829"(cytosol)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006891"(intra-Golgi vesicle-mediated transport)|go:"GO:0016236"(macroautophagy)|go:"GO:0030008"(TRAPP complex)|go:"GO:0032258"(cytoplasm to vacuole transport by the Cvt pathway)|go:"GO:0033106"(cis-Golgi network membrane)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:1990070"(TRAPPI protein complex)|go:"GO:1990071"(TRAPPII protein complex)|go:"GO:1990072"(TRAPPIII protein complex)|interpro:IPR007194("Transport protein particle (TRAPP) component, Bet3")|interpro:IPR016721(TRAPP I complex, Bet3)|interpro:IPR024096|rcsb pdb:3CUE|rcsb pdb:7KMT|reactome:R-SCE-204005|reactome:R-SCE-8876198 refseq:NP_013634.1|sgd:S000004542|reactome:R-SCE-204005|reactome:R-SCE-6798695|dip:DIP-4528N|reactome:R-SCE-8876198|ensemblfungi:YML077W(gene)|ensemblfungi:YML077W_mRNA(transcript)|go:"GO:0000407"(phagophore assembly site)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0006888"(endoplasmic reticulum to Golgi vesicle-mediated transport)|go:"GO:0006914"(autophagy)|go:"GO:0030008"(TRAPP complex)|go:"GO:0050790"(regulation of catalytic activity)|go:"GO:1990070"(TRAPPI protein complex)|go:"GO:1990071"(TRAPPII protein complex)|go:"GO:1990072"(TRAPPIII protein complex)|interpro:IPR007233(Sybindin-like protein)|interpro:IPR011012(Longin-like)|rcsb pdb:3CUE|rcsb pdb:7KMT - crc64:C802D8A3563DE82B crc64:4821217270F516E9 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:XN0vyDhpSkOFxu+sgthTqABoSxM559292 rogid:bWKvxbORQE3Hl5BqHfS4mbRozek559292 intact-crc:2E6ED45B66DE9903|rigid:Nv0X/MQw7XRP9EY8yis7DJEbcYU false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P20604 uniprotkb:Q04372 intact:EBI-13707|uniprotkb:D6VRU8|ensemblfungi:YDL047W intact:EBI-18926|uniprotkb:Q05039|uniprotkb:D6VZK2|ensemblfungi:YMR028W psi-mi:pp11_yeast(display_long)|uniprotkb:SIT4(gene name)|psi-mi:SIT4(display_short)|uniprotkb:PPH1(gene name synonym)|uniprotkb:YDL047W(locus name)|uniprotkb:D2693(orf name) psi-mi:tap42_yeast(display_long)|uniprotkb:YM9711.18(orf name)|uniprotkb:YM9973.01C(orf name)|uniprotkb:YMR028W(locus name)|uniprotkb:TAP42(gene name)|psi-mi:TAP42(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473082|imex:IM-18537-79 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_010236.1|sgd:S000002205|ensemblfungi:YDL047W(gene)|ensemblfungi:YDL047W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000159"(protein phosphatase type 2A complex)|go:"GO:0002098"(tRNA wobble uridine modification)|go:"GO:0051301"(cell division)|go:"GO:0060237"(regulation of fungal-type cell wall organization)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-204005|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0016311"(dephosphorylation)|go:"GO:0031929"(TOR signaling)|go:"GO:0032956"(regulation of actin cytoskeleton organization)|go:"GO:0034599"(cellular response to oxidative stress)|go:"GO:0035556"(intracellular signal transduction)|go:"GO:0046872"(metal ion binding)|mint:P20604|dip:DIP-5850N ensemblfungi:YMR028W(gene)|ensemblfungi:YMR028W_mRNA(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0009968"(negative regulation of signal transduction)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031929"(TOR signaling)|go:"GO:0035303"(regulation of dephosphorylation)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0051721"(protein phosphatase 2A binding)|interpro:IPR007304(TAP42-like protein)|interpro:IPR038511|rcsb pdb:2V0P|refseq:NP_013741.1|sgd:S000004630|dip:DIP-6380N|mint:Q04372 - crc64:AF52BC65E4E715EC crc64:16F1E236BEC696DD figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Up3F/fGsTK1vYjho+dJ/TDVIEM0559292 rogid:FPTKyL4WGNJLs17yL7h6bEzz4vI559292 intact-crc:EC381814908C0A70|rigid:77s6xt8ySouByDYISJJ1417mAJs false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q04067 uniprotkb:P40217 intact:EBI-8958|ensemblfungi:YDR429C|uniprotkb:D6VT58 intact:EBI-8951|ensemblfungi:YMR146C|uniprotkb:D6VZW8 psi-mi:eif3g_yeast(display_long)|uniprotkb:TIF35(gene name)|psi-mi:TIF35(display_short)|uniprotkb:YDR429C(locus name)|uniprotkb:D9461.16(orf name)|uniprotkb:Eukaryotic translation initiation factor 3 RNA-binding subunit(gene name synonym)|uniprotkb:Translation initiation factor eIF3 p33 subunit(gene name synonym) psi-mi:eif3i_yeast(display_long)|uniprotkb:TIF34(gene name)|psi-mi:TIF34(display_short)|uniprotkb:YMR146C(locus name)|uniprotkb:YM9375.16C(orf name)|uniprotkb:Eukaryotic translation initiation factor 3 39 kDa subunit(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473071|imex:IM-18537-78 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR429C(gene)|ensemblfungi:YDR429C_mRNA(transcript)|go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0002188"(translation reinitiation)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005852"(eukaryotic translation initiation factor 3 complex)|go:"GO:0006413"(translational initiation)|go:"GO:0006415"(translational termination)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0043614"(multi-eIF complex)|interpro:IPR000504(RNA recognition motif, RNP-1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR017334(Translation initiation factor 3, RNA-binding subunit)|interpro:IPR024675|interpro:IPR034240|interpro:IPR035979|rcsb pdb:3JAP|rcsb pdb:3JAQ|rcsb pdb:4U1E|rcsb pdb:6FYX|rcsb pdb:6FYY|rcsb pdb:6GSM|rcsb pdb:6GSN|rcsb pdb:6ZCE|rcsb pdb:6ZU9|reactome:R-SCE-156827|reactome:R-SCE-72649|reactome:R-SCE-72695|reactome:R-SCE-72702|refseq:NP_010717.1|sgd:S000002837|mint:Q04067|dip:DIP-1704N ensemblfungi:YMR146C(gene)|ensemblfungi:YMR146C_mRNA(transcript)|go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0002183"(cytoplasmic translational initiation)|go:"GO:0002188"(translation reinitiation)|go:"GO:0003723"(RNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005852"(eukaryotic translation initiation factor 3 complex)|go:"GO:0006413"(translational initiation)|go:"GO:0010494"(cytoplasmic stress granule)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0032781"(positive regulation of ATP-dependent activity)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0043614"(multi-eIF complex)|go:"GO:0071541"(eukaryotic translation initiation factor 3 complex, eIF3m)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR027525|interpro:IPR036322|rcsb pdb:3JAP|rcsb pdb:3JAQ|rcsb pdb:3ZWL|rcsb pdb:5A5U|rcsb pdb:6FYX|rcsb pdb:6FYY|rcsb pdb:6GSM|rcsb pdb:6GSN|rcsb pdb:6ZCE|rcsb pdb:6ZU9|reactome:R-SCE-156827|reactome:R-SCE-72649|reactome:R-SCE-72695|reactome:R-SCE-72702|refseq:NP_013866.1|sgd:S000004754|mint:P40217|dip:DIP-2520N - crc64:340A5285F2C84E06 crc64:E6C0D0B275E87622 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:v7lKonGYtSi5ZT4abzAzES8VLAk559292 rogid:yiEGZUsT5RdaocsqZq2BUELIsR8559292 intact-crc:AE25939EF6B73628|rigid:/5vV5IMm3VByk9/MQ8cT2yqKnWo false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P25847 uniprotkb:Q03834 intact:EBI-11352|uniprotkb:Q12423|ensemblfungi:YOL090W|uniprotkb:D6W1X8 intact:EBI-11383|ensemblfungi:YDR097C|uniprotkb:D6VS82 psi-mi:msh2_yeast(display_long)|uniprotkb:MSH2(gene name)|psi-mi:MSH2(display_short)|uniprotkb:YOL090W(locus name)|uniprotkb:O0935(orf name)|uniprotkb:MutS protein homolog 2(gene name synonym) psi-mi:msh6_yeast(display_long)|uniprotkb:MSH6(gene name)|psi-mi:MSH6(display_short)|uniprotkb:YDR097C(locus name)|uniprotkb:YD8557.04C(orf name)|uniprotkb:PMS3(gene name synonym)|uniprotkb:MutS protein homolog 6(gene name synonym)|uniprotkb:Postmeiotic segregation protein 3(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473060|imex:IM-18537-77 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOL090W(gene)|ensemblfungi:YOL090W_mRNA(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000406"(double-strand/single-strand DNA junction binding)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0000735"(removal of nonhomologous ends)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006298"(mismatch repair)|go:"GO:0006301"(postreplication repair)|go:"GO:0006310"(DNA recombination)|go:"GO:0006311"(meiotic gene conversion)|go:"GO:0006312"(mitotic recombination)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016887"(ATP hydrolysis activity)|go:"GO:0030466"(silent mating-type cassette heterochromatin assembly)|go:"GO:0030983"(mismatched DNA binding)|go:"GO:0032301"(MutSalpha complex)|go:"GO:0032302"(MutSbeta complex)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043111"(replication fork arrest)|go:"GO:0043570"(maintenance of DNA repeat elements)|go:"GO:0045910"(negative regulation of DNA recombination)|interpro:IPR000432(DNA mismatch repair protein MutS, C-terminal)|interpro:IPR007695(DNA mismatch repair protein MutS-like, N-terminal)|interpro:IPR007696(DNA mismatch repair protein MutS, core)|interpro:IPR007860(DNA mismatch repair protein MutS, connector)|interpro:IPR007861(DNA mismatch repair protein MutS, clamp)|interpro:IPR011184(DNA mismatch repair protein, MSH2)|interpro:IPR016151(DNA mismatch repair protein MutS, N-terminal)|interpro:IPR027417|interpro:IPR032642|interpro:IPR036187|interpro:IPR036678|reactome:R-SCE-5358565|reactome:R-SCE-5358606|go:"GO:0032300"(mismatch repair complex)|refseq:NP_014551.1|sgd:S000005450|mint:P25847|dip:DIP-2415N ensemblfungi:YDR097C(gene)|go:"GO:0030983"(mismatched DNA binding)|go:"GO:0032300"(mismatch repair complex)|go:"GO:0032301"(MutSalpha complex)|go:"GO:0036297"(interstrand cross-link repair)|go:"GO:0043111"(replication fork arrest)|go:"GO:0043570"(maintenance of DNA repeat elements)|go:"GO:0045910"(negative regulation of DNA recombination)|interpro:IPR000432(DNA mismatch repair protein MutS, C-terminal)|interpro:IPR007695(DNA mismatch repair protein MutS-like, N-terminal)|interpro:IPR007696(DNA mismatch repair protein MutS, core)|interpro:IPR007860(DNA mismatch repair protein MutS, connector)|ensemblfungi:YDR097C_mRNA(transcript)|go:"GO:0000400"(four-way junction DNA binding)|go:"GO:0000710"(meiotic mismatch repair)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|interpro:IPR007861(DNA mismatch repair protein MutS, clamp)|go:"GO:0005737"(cytoplasm)|go:"GO:0006290"(pyrimidine dimer repair)|go:"GO:0006298"(mismatch repair)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016887"(ATP hydrolysis activity)|interpro:IPR016151(DNA mismatch repair protein MutS, N-terminal)|interpro:IPR017261(DNA mismatch repair protein Msh6)|interpro:IPR027417|interpro:IPR036187|interpro:IPR036678|reactome:R-SCE-5358565|refseq:NP_010382.3|sgd:S000002504|mint:Q03834|dip:DIP-2423N - crc64:43FFD8A640138AE4 crc64:11A6883AADCFA222 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:PNwekSiaI58qR+dPZZQW5UNRJ+4559292 rogid:IufLo1sfhfBnNLFLGR/VO5gkApI559292 intact-crc:AE39D391F1586858|rigid:YXOBvHYwU4PopCXtC0hy8v19tsg false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P40089 uniprotkb:Q06406 intact:EBI-10236|uniprotkb:D3DM53|ensemblfungi:YER146W intact:EBI-196|uniprotkb:D6VT10|ensemblfungi:YDR378C psi-mi:lsm5_yeast(display_long)|uniprotkb:LSM5(gene name)|psi-mi:LSM5(display_short)|uniprotkb:YER146W(locus name) psi-mi:lsm6_yeast(display_long)|uniprotkb:LSM6(gene name)|psi-mi:LSM6(display_short)|uniprotkb:D9481.18(orf name)|uniprotkb:YDR378C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473115|imex:IM-18537-82 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_011073.1|sgd:S000000948|ensemblfungi:YER146W(gene)|ensemblfungi:YER146W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000956"(nuclear-transcribed mRNA catabolic process)|go:"GO:0003723"(RNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0006364"(rRNA processing)|go:"GO:0008033"(tRNA processing)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR033871|rcsb pdb:4C8Q|rcsb pdb:3JCM|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039|dip:DIP-1417N|mint:P40089 refseq:NP_010666.2|sgd:S000002786|mint:Q06406|dip:DIP-1418N|ensemblfungi:YDR378C(gene)|ensemblfungi:YDR378C_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000932"(P-body)|go:"GO:0003723"(RNA binding)|go:"GO:0005681"(spliceosomal complex)|go:"GO:0005688"(U6 snRNP)|go:"GO:0005730"(nucleolus)|go:"GO:0005732"("sno(s)RNA-containing ribonucleoprotein complex")|go:"GO:0008033"(tRNA processing)|go:"GO:0030490"(maturation of SSU-rRNA)|go:"GO:0046540"(U4/U6 x U5 tri-snRNP complex)|go:"GO:1990726"(Lsm1-7-Pat1 complex)|interpro:IPR001163(Like-Sm ribonucleoprotein, core)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR016487(Small nuclear ribonucleoprotein SmF)|rcsb pdb:3JCM|rcsb pdb:4C8Q|rcsb pdb:4C92|rcsb pdb:4M75|rcsb pdb:4M77|rcsb pdb:4M78|rcsb pdb:4M7A|rcsb pdb:4M7D|rcsb pdb:5GAN|rcsb pdb:5NRL|rcsb pdb:5VSU|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6ASO|reactome:R-SCE-430039 - crc64:84E8A1E8E2F078FE crc64:74FE40A4509CEF33 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:+Q2uxsm6FVpx5lehw62szhlGh8U559292 rogid:JQtrhOkngO6APIPCFMRnKogB96c559292 intact-crc:C7979C03CEBAC2F0|rigid:tRP5OpMvec/phRek2e2BcMWfPwY false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q04477 uniprotkb:P40460 intact:EBI-27228|uniprotkb:D6VZU0|ensemblfungi:YMR117C intact:EBI-25247|uniprotkb:D6VVE3|ensemblfungi:YIL144W psi-mi:spc24_yeast(display_long)|uniprotkb:SPC24(gene name)|psi-mi:SPC24(display_short)|uniprotkb:YM9718.16C(orf name)|uniprotkb:YMR117C(locus name) psi-mi:ndc80_yeast(display_long)|uniprotkb:NDC80(gene name)|psi-mi:NDC80(display_short)|uniprotkb:80 kDa spindle component protein(gene name synonym)|uniprotkb:HEC1(gene name synonym)|uniprotkb:Nuclear division cycle protein 80(gene name synonym)|uniprotkb:TID3(gene name synonym)|uniprotkb:Two-hybrid interaction with DMC1 protein 3(gene name synonym)|uniprotkb:YIL144W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473104|imex:IM-18537-81 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013835.1|sgd:S000004723|mint:Q04477|dip:DIP-893N|ensemblfungi:YMR117C(gene)|ensemblfungi:YMR117C_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0005634"(nucleus)|go:"GO:0007049"(cell cycle)|go:"GO:0007059"(chromosome segregation)|go:"GO:0031262"(Ndc80 complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|go:"GO:0098653"(centromere clustering)|interpro:IPR013252(Kinetochore-Ndc80 subunit Spc24)|interpro:IPR038066|rcsb pdb:2FTX|rcsb pdb:2FV4|rcsb pdb:4GEQ|rcsb pdb:5T6J|rcsb pdb:5TCS|rcsb pdb:5TD8|rcsb pdb:7KDF sgd:S000001406|refseq:NP_012122.3|mint:P40460|dip:DIP-818N|ensemblfungi:YIL144W(gene)|ensemblfungi:YIL144W_mRNA(transcript)|go:"GO:0000776"(kinetochore)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0005634"(nucleus)|go:"GO:0007059"(chromosome segregation)|go:"GO:0031262"(Ndc80 complex)|go:"GO:0034501"(protein localization to kinetochore)|go:"GO:0042802"(identical protein binding)|go:"GO:0051301"(cell division)|go:"GO:0051315"(attachment of mitotic spindle microtubules to kinetochore)|interpro:IPR005550(HEC/Ndc80p)|interpro:IPR038273|interpro:IPR040967|rcsb pdb:5TCS|rcsb pdb:5TD8|rcsb pdb:7KDF - crc64:8BE4B8619DD4C8FB crc64:7DBC492227A80093 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:B12w0JvNs2He1WjK6c241nF3pZc559292 rogid:ZrT7N4pBKz6upSglhGhOqgeoAYw559292 intact-crc:CD7E64D4D8841FD6|rigid:hc8tE9q7kV6HhdjTA3V6qBepFoI false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q04372 uniprotkb:P23595 intact:EBI-18926|uniprotkb:Q05039|uniprotkb:D6VZK2|ensemblfungi:YMR028W intact:EBI-12752|uniprotkb:D6VRG5|ensemblfungi:YDL188C psi-mi:tap42_yeast(display_long)|uniprotkb:YM9711.18(orf name)|uniprotkb:YM9973.01C(orf name)|uniprotkb:YMR028W(locus name)|uniprotkb:TAP42(gene name)|psi-mi:TAP42(display_short) psi-mi:pp2a2_yeast(display_long)|uniprotkb:PPH22(gene name)|psi-mi:PPH22(display_short)|uniprotkb:SIS4(gene name synonym)|uniprotkb:YDL188C(locus name)|uniprotkb:D1271(orf name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473093|imex:IM-18537-80 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YMR028W(gene)|ensemblfungi:YMR028W_mRNA(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0009968"(negative regulation of signal transduction)|go:"GO:0019898"(extrinsic component of membrane)|go:"GO:0031929"(TOR signaling)|go:"GO:0035303"(regulation of dephosphorylation)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0051721"(protein phosphatase 2A binding)|interpro:IPR007304(TAP42-like protein)|interpro:IPR038511|rcsb pdb:2V0P|refseq:NP_013741.1|sgd:S000004630|dip:DIP-6380N|mint:Q04372 ensemblfungi:YDL188C(gene)|ensemblfungi:YDL188C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000779"(condensed chromosome, centromeric region)|go:"GO:0004722"(protein serine/threonine phosphatase activity)|go:"GO:0006470"(protein dephosphorylation)|go:"GO:0006417"(regulation of translation)|go:"GO:0007015"(actin filament organization)|go:"GO:0007117"(budding cell bud growth)|go:"GO:0034399"(nuclear periphery)|go:"GO:0046872"(metal ion binding)|go:"GO:0070262"(peptidyl-serine dephosphorylation)|go:"GO:0106306"|go:"GO:0106307"|go:"GO:2000198"(negative regulation of ribonucleoprotein complex localization)|go:"GO:2000786"(positive regulation of autophagosome assembly)|interpro:IPR004843(Metallophosphoesterase)|interpro:IPR006186("Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase")|interpro:IPR029052|reactome:R-SCE-198753|reactome:R-SCE-202670|reactome:R-SCE-389513|reactome:R-SCE-6811558|reactome:R-SCE-69273|refseq:NP_010093.1|sgd:S000002347|mint:P23595|dip:DIP-2283N - crc64:16F1E236BEC696DD crc64:549D3C6F1E2EB335 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:FPTKyL4WGNJLs17yL7h6bEzz4vI559292 rogid:sKD3DJdRePGJ97regq2tgyswJ0E559292 intact-crc:8BBD8CA3038C58B5|rigid:7afUEwxJaAhYGHBpxDoGV4nsL2M false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q06549 uniprotkb:Q06549 intact:EBI-4455|ensemblfungi:YLR245C|uniprotkb:D6VYP3 intact:EBI-4455|ensemblfungi:YLR245C|uniprotkb:D6VYP3 psi-mi:cdd_yeast(display_long)|uniprotkb:CDD1(gene name)|psi-mi:CDD1(display_short)|uniprotkb:YLR245C(locus name)|uniprotkb:L9672.13(orf name)|uniprotkb:Cytidine aminohydrolase(gene name synonym) psi-mi:cdd_yeast(display_long)|uniprotkb:CDD1(gene name)|psi-mi:CDD1(display_short)|uniprotkb:YLR245C(locus name)|uniprotkb:L9672.13(orf name)|uniprotkb:Cytidine aminohydrolase(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473126|imex:IM-18537-83 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013346.1|sgd:S000004235|go:"GO:0006217"(deoxycytidine catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008655"(pyrimidine-containing compound salvage)|go:"GO:0009972"(cytidine deamination)|go:"GO:0042802"(identical protein binding)|go:"GO:0047844"(deoxycytidine deaminase activity)|ensemblfungi:YLR245C(gene)|ensemblfungi:YLR245C_mRNA(transcript)|interpro:IPR002125(CMP/dCMP deaminase, zinc-binding)|interpro:IPR006262(Cytidine deaminase, homotetrameric)|interpro:IPR016192(APOBEC/CMP deaminase, zinc-binding)|interpro:IPR016193(Cytidine deaminase-like)|rcsb pdb:1R5T|go:"GO:0004126"(cytidine deaminase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006216"(cytidine catabolic process)|reactome:R-SCE-6798695|mint:Q06549|dip:DIP-1252N|reactome:R-SCE-73614 refseq:NP_013346.1|sgd:S000004235|go:"GO:0006217"(deoxycytidine catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008655"(pyrimidine-containing compound salvage)|go:"GO:0009972"(cytidine deamination)|go:"GO:0042802"(identical protein binding)|go:"GO:0047844"(deoxycytidine deaminase activity)|ensemblfungi:YLR245C(gene)|ensemblfungi:YLR245C_mRNA(transcript)|interpro:IPR002125(CMP/dCMP deaminase, zinc-binding)|interpro:IPR006262(Cytidine deaminase, homotetrameric)|interpro:IPR016192(APOBEC/CMP deaminase, zinc-binding)|interpro:IPR016193(Cytidine deaminase-like)|rcsb pdb:1R5T|go:"GO:0004126"(cytidine deaminase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006216"(cytidine catabolic process)|reactome:R-SCE-6798695|mint:Q06549|dip:DIP-1252N|reactome:R-SCE-73614 - - - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:+bBpd3F/Pcvnc+F5LzAX3ia3tIk559292 rogid:+bBpd3F/Pcvnc+F5LzAX3ia3tIk559292 intact-crc:615FCA83A7227FA3|rigid:jYF11JsNF+6OnYYJx2KLTTVhK9Q false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P32524 uniprotkb:Q07350 intact:EBI-603|intact:EBI-464832|uniprotkb:Q6Q5G7|uniprotkb:D6VVZ1|ensemblfungi:YJL203W intact:EBI-688|uniprotkb:Q05434|ensemblfungi:YDL043C|uniprotkb:D6VRV3 psi-mi:prp21_yeast(display_long)|uniprotkb:PRP21(gene name)|psi-mi:PRP21(display_short)|uniprotkb:SPP91(gene name synonym)|uniprotkb:YJL203W(locus name)|uniprotkb:J0322(orf name) psi-mi:prp11_yeast(display_long)|uniprotkb:PRP11(gene name)|psi-mi:PRP11(display_short)|uniprotkb:PRP10(gene name synonym)|uniprotkb:RNA11(gene name synonym)|uniprotkb:YDL043C(locus name)|uniprotkb:D2711(orf name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473137|imex:IM-18537-84 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012332.1|sgd:S000003739|dip:DIP-689N|mint:P32524|ensemblfungi:YJL203W(gene)|ensemblfungi:YJL203W_mRNA(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003723"(RNA binding)|go:"GO:0005686"(U2 snRNP)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR000061(SWAP/Surp)|interpro:IPR022030|interpro:IPR035967|rcsb pdb:4DGW|rcsb pdb:5NRL|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6G90|rcsb pdb:7DCO refseq:NP_010241.1|sgd:S000002201|ensemblfungi:YDL043C(gene)|ensemblfungi:YDL043C_mRNA(transcript)|go:"GO:0000245"(spliceosomal complex assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0005686"(U2 snRNP)|go:"GO:0008270"(zinc ion binding)|go:"GO:0071004"(U2-type prespliceosome)|go:"GO:0071013"(catalytic step 2 spliceosome)|interpro:IPR003604(Zinc finger, U1-type)|interpro:IPR031781|interpro:IPR036236|rcsb pdb:4DGW|rcsb pdb:5GM6|rcsb pdb:5NRL|rcsb pdb:5ZWM|rcsb pdb:5ZWO|rcsb pdb:6G90|dip:DIP-1001N|mint:Q07350 - crc64:2E9DBA6F06759B3F crc64:D8BA3BB27F36F06F figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mOta2u2zOwtuZB+8s4z9DBL9iI0559292 rogid:xyunpB0FKbtjXifS4hyBHPmL4zs559292 intact-crc:6313382D8F9DD833|rigid:JzyUHJrzii+Zh7s75PKQC7TAHJI false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P07834 uniprotkb:Q08273 intact:EBI-4434|ensemblfungi:YFL009W|uniprotkb:D6VTM1 intact:EBI-31686|uniprotkb:D6W1T5|ensemblfungi:YOL133W psi-mi:cdc4_yeast(display_long)|uniprotkb:CDC4(gene name)|psi-mi:CDC4(display_short)|uniprotkb:YFL009W(locus name)|uniprotkb:F-box protein CDC4(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC4(gene name synonym) psi-mi:rbx1_yeast(display_long)|uniprotkb:E3 ubiquitin-protein ligase complex SCF subunit HRT1(gene name synonym)|uniprotkb:High level expression reduces Ty3 transposition protein 1(gene name synonym)|uniprotkb:HRT1(gene name)|psi-mi:HRT1(display_short)|uniprotkb:RBX1(gene name synonym)|uniprotkb:ROC1(gene name synonym)|uniprotkb:Regulator of cullins protein 1(gene name synonym)|uniprotkb:YOL133W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473148|imex:IM-18537-85 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) reactome:R-SCE-174113|reactome:R-SCE-8951664|reactome:R-SCE-983168|ensemblfungi:YFL009W(gene)|ensemblfungi:YFL009W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016363"(nuclear matrix)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030435"(sporulation resulting in formation of a cellular spore)|go:"GO:0030686"(90S preribosome)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0034511"(U3 snoRNA binding)|go:"GO:0043130"(ubiquitin binding)|refseq:NP_116585.1|sgd:S000001885|dip:DIP-1625N|go:"GO:0043224"(nuclear SCF ubiquitin ligase complex)|go:"GO:0050815"(phosphoserine residue binding)|go:"GO:0051301"(cell division)|go:"GO:0051321"(meiotic cell cycle)|interpro:IPR001680(WD40 repeat)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR031740|interpro:IPR036047|interpro:IPR036322|rcsb pdb:1NEX|rcsb pdb:2P63|rcsb pdb:3MKS|rcsb pdb:3V7D refseq:NP_014508.1|sgd:S000005493|dip:DIP-1373N|mint:Q08273|ensemblfungi:YOL133W(gene)|ensemblfungi:YOL133W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:0348F2F8FA78F3BC crc64:A9C3193E48CAF881 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KUKB7HDw6k4t7Gb1pDGW8P5J1kw559292 rogid:7LBUfvb6zpWuPkbMDrEAnrMuJj8559292 intact-crc:9B3158D9782004D6|rigid:ZSfrAAyWU+NQ5usxKacrd6q+Hug false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12018 uniprotkb:Q08273 intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 intact:EBI-31686|uniprotkb:D6W1T5|ensemblfungi:YOL133W psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:rbx1_yeast(display_long)|uniprotkb:E3 ubiquitin-protein ligase complex SCF subunit HRT1(gene name synonym)|uniprotkb:High level expression reduces Ty3 transposition protein 1(gene name synonym)|uniprotkb:HRT1(gene name)|psi-mi:HRT1(display_short)|uniprotkb:RBX1(gene name synonym)|uniprotkb:ROC1(gene name synonym)|uniprotkb:Regulator of cullins protein 1(gene name synonym)|uniprotkb:YOL133W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473159|imex:IM-18537-86 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 refseq:NP_014508.1|sgd:S000005493|dip:DIP-1373N|mint:Q08273|ensemblfungi:YOL133W(gene)|ensemblfungi:YOL133W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:22BC8B35034EDDEF crc64:A9C3193E48CAF881 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 rogid:7LBUfvb6zpWuPkbMDrEAnrMuJj8559292 intact-crc:F44A25B9DF6785FF|rigid:4FdOhiOhnoRA0TK3CaqtIO7Td4w false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q08273 uniprotkb:Q12018 intact:EBI-31686|uniprotkb:D6W1T5|ensemblfungi:YOL133W intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 psi-mi:rbx1_yeast(display_long)|uniprotkb:E3 ubiquitin-protein ligase complex SCF subunit HRT1(gene name synonym)|uniprotkb:High level expression reduces Ty3 transposition protein 1(gene name synonym)|uniprotkb:HRT1(gene name)|psi-mi:HRT1(display_short)|uniprotkb:RBX1(gene name synonym)|uniprotkb:ROC1(gene name synonym)|uniprotkb:Regulator of cullins protein 1(gene name synonym)|uniprotkb:YOL133W(locus name) psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473192|imex:IM-18537-89 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014508.1|sgd:S000005493|dip:DIP-1373N|mint:Q08273|ensemblfungi:YOL133W(gene)|ensemblfungi:YOL133W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031463"(Cul3-RING ubiquitin ligase complex)|go:"GO:0035361"(Cul8-RING ubiquitin ligase complex)|go:"GO:0051301"(cell division)|go:"GO:0061630"(ubiquitin protein ligase activity)|go:"GO:0097602"(cullin family protein binding)|interpro:IPR001841(Zinc finger, RING-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR024766|reactome:R-SCE-5696395|reactome:R-SCE-6781823|reactome:R-SCE-6782135|reactome:R-SCE-6782210|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:A9C3193E48CAF881 crc64:22BC8B35034EDDEF figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:7LBUfvb6zpWuPkbMDrEAnrMuJj8559292 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 intact-crc:1CD0A1719D09A55D|rigid:4FdOhiOhnoRA0TK3CaqtIO7Td4w false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P52286 uniprotkb:Q12018 intact:EBI-4090|uniprotkb:Q07186|uniprotkb:D6VSW0|ensemblfungi:YDR328C intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 psi-mi:skp1_yeast(display_long)|uniprotkb:SKP1(gene name)|psi-mi:SKP1(display_short)|uniprotkb:CBF3D(gene name synonym)|uniprotkb:YDR328C(locus name)|uniprotkb:D9798.14(orf name)|uniprotkb:Centromere DNA-binding protein complex CBF3 subunit D(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit SKP1(gene name synonym) psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473181|imex:IM-18537-88 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002736|refseq:NP_010615.3|dip:DIP-1236N|mint:P52286|ensemblfungi:YDR328C(gene)|ensemblfungi:YDR328C_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0000278"(mitotic cell cycle)|go:"GO:0000776"(kinetochore)|go:"GO:0000921"(septin ring assembly)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0007035"(vacuolar acidification)|go:"GO:0007096"(regulation of exit from mitosis)|go:"GO:0010458"(exit from mitosis)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031518"(CBF3 complex)|go:"GO:0034622"|go:"GO:0043254"(regulation of protein-containing complex assembly)|go:"GO:0043291"(RAVE complex)|go:"GO:0045116"(protein neddylation)|go:"GO:0051382"(kinetochore assembly)|go:"GO:0097602"(cullin family protein binding)|go:"GO:2000766"(negative regulation of cytoplasmic translation)|interpro:IPR001232(SKP1 component)|interpro:IPR011333(BTB/POZ fold)|interpro:IPR016072(SKP1 component, dimerisation)|interpro:IPR016073(SKP1 component, POZ)|interpro:IPR016897(E3 ubiquitin ligase, SCF complex, Skp subunit)|interpro:IPR036296|rcsb pdb:1NEX|rcsb pdb:3MKS|rcsb pdb:3V7D|rcsb pdb:5AN3|rcsb pdb:6F07|rcsb pdb:6FE8|rcsb pdb:6GSA|rcsb pdb:6GYP|rcsb pdb:6GYS|rcsb pdb:6GYU|rcsb pdb:7K79|reactome:R-SCE-174113|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:746DDE6470A69432 crc64:22BC8B35034EDDEF figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:HO5Uz+KzzWNBubxoXRDNTVi8eIA559292 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 intact-crc:FF840E0686CC71F7|rigid:jOTJGUJ8/FiR/WQblFXHrdihz0k false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P24814 uniprotkb:Q12018 intact:EBI-7898|uniprotkb:D6VWQ8|ensemblfungi:YJR090C intact:EBI-4321|ensemblfungi:YDL132W|uniprotkb:D6VRL7 psi-mi:grr1_yeast(display_long)|uniprotkb:GRR1(gene name)|psi-mi:GRR1(display_short)|uniprotkb:CAT80(gene name synonym)|uniprotkb:COT2(gene name synonym)|uniprotkb:YJR090C(locus name)|uniprotkb:J1885(orf name)|uniprotkb:F-box and leucine-rich repeat protein GRR1(gene name synonym)|uniprotkb:F-box/LRR-repeat protein GRR1(gene name synonym) psi-mi:cdc53_yeast(display_long)|uniprotkb:CDC53(gene name)|psi-mi:CDC53(display_short)|uniprotkb:YDL132W(locus name)|uniprotkb:D2190(orf name)|uniprotkb:Cullin-A(gene name synonym)|uniprotkb:E3 ubiquitin ligase complex SCF subunit CDC53(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473170|imex:IM-18537-87 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012623.1|sgd:S000003850|mint:P24814|dip:DIP-1626N|ensemblfungi:YJR090C(gene)|ensemblfungi:YJR090C_mRNA(transcript)|go:"GO:0000142"(cellular bud neck contractile ring)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0000751"(mitotic cell cycle G1 arrest in response to pheromone)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006006"(glucose metabolic process)|go:"GO:0016020"(membrane)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0071406"(cellular response to methylmercury)|interpro:IPR001810(Cyclin-like F-box)|interpro:IPR006553(Leucine-rich repeat, cysteine-containing subtype)|interpro:IPR032675|reactome:R-SCE-163210|reactome:R-SCE-8949613 dip:DIP-1234N|ensemblfungi:YDL132W(gene)|ensemblfungi:YDL132W_mRNA(transcript)|go:"GO:0000082"(G1/S transition of mitotic cell cycle)|go:"GO:0000086"(G2/M transition of mitotic cell cycle)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0019005"(SCF ubiquitin ligase complex)|go:"GO:0030674"(protein-macromolecule adaptor activity)|go:"GO:0031146"(SCF-dependent proteasomal ubiquitin-dependent protein catabolic process)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0051301"(cell division)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|rcsb pdb:3O2P|rcsb pdb:3O6B|reactome:R-SCE-174113|refseq:NP_010150.1|sgd:S000002290|mint:Q12018|reactome:R-SCE-68949|reactome:R-SCE-8854050|reactome:R-SCE-8951664|reactome:R-SCE-983168 - crc64:6BB6C46611E6F825 crc64:22BC8B35034EDDEF figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:0s/WFupjCQeASvFVM+A9mSskzXY559292 rogid:ycwncb4mcXUbeLZlAdn3jN34zsI559292 intact-crc:941C201D4340BEB9|rigid:WdTCMOj7SDtbKPIfNKkYGRg4HHc false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12186 uniprotkb:P36084 intact:EBI-34012|ensemblfungi:YLR116W|uniprotkb:D6VYB4 intact:EBI-11612|ensemblfungi:YKL074C|uniprotkb:D6VXL2 psi-mi:bbp_yeast(display_long)|uniprotkb:MSL5(gene name)|psi-mi:MSL5(display_short)|uniprotkb:BBP(gene name synonym)|uniprotkb:YLR116W(locus name)|uniprotkb:Splicing factor 1(gene name synonym)|uniprotkb:Zinc finger protein BBP(gene name synonym)|uniprotkb:Mud synthetic-lethal 5 protein(gene name synonym)|uniprotkb:SF1(gene name synonym)|uniprotkb:L2949(orf name) psi-mi:mud2_yeast(display_long)|uniprotkb:MUD2(gene name)|psi-mi:MUD2(display_short)|uniprotkb:YKL358(orf name)|uniprotkb:YKL074C(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473214|imex:IM-18537-91 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YLR116W(gene)|ensemblfungi:YLR116W_mRNA(transcript)|go:"GO:0000243"(commitment complex)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0008270"(zinc ion binding)|go:"GO:0045131"(pre-mRNA branch point binding)|go:"GO:0048024"(regulation of mRNA splicing, via spliceosome)|interpro:IPR001878(Zinc finger, CCHC-type)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR013041(Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain)|interpro:IPR031150|refseq:NP_013217.1|sgd:S000004106|mint:Q12186|dip:DIP-991N|interpro:IPR032570|interpro:IPR036612|interpro:IPR036875|rcsb pdb:3FMA|rcsb pdb:4WAL|rcsb pdb:4WAN go:"GO:0000243"(commitment complex)|go:"GO:0000348"(mRNA branch site recognition)|go:"GO:0003729"(mRNA binding)|go:"GO:0008187"(poly-pyrimidine tract binding)|go:"GO:0016607"(nuclear speck)|ensemblfungi:YKL074C(gene)|go:"GO:0030628"(pre-mRNA 3'-splice site binding)|go:"GO:0045131"(pre-mRNA branch point binding)|go:"GO:0071004"(U2-type prespliceosome)|ensemblfungi:YKL074C_mRNA(transcript)|go:"GO:0089701"(U2AF complex)|interpro:IPR003954(RNA recognition, region 1)|interpro:IPR012677(Nucleotide-binding, alpha-beta plait)|interpro:IPR035979|refseq:NP_012849.1|sgd:S000001557|mint:P36084|dip:DIP-758N - - - figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:DMnGp//BLk+b8ycJoFmiBmgNQS0559292 rogid:l/aBULMxdezuufNxUE5qqnYEN1Y559292 intact-crc:253BECDA97F56069|rigid:6PAK0PkrxHZMTbHARPerJB/OWUU false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q04839 uniprotkb:Q12315 intact:EBI-27549|uniprotkb:D6W081|ensemblfungi:YMR255W intact:EBI-7635|uniprotkb:D6VRE7|ensemblfungi:YDL207W psi-mi:gfd1_yeast(display_long)|uniprotkb:GFD1(gene name)|psi-mi:GFD1(display_short)|uniprotkb:YMR255W(locus name)|uniprotkb:YM9920.09(orf name)|uniprotkb:Good for full DBP5 activity protein 1(gene name synonym) psi-mi:gle1_yeast(display_long)|uniprotkb:BRR3(gene name synonym)|uniprotkb:RSS1(gene name synonym)|uniprotkb:YDL207W(locus name)|uniprotkb:D1049(orf name)|uniprotkb:GLE1(gene name)|psi-mi:GLE1(display_short)|uniprotkb:Nuclear pore protein GLE1(gene name synonym)|uniprotkb:RNA export factor GLE1(gene name synonym)|uniprotkb:Nucleoporin GLE1(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473225|imex:IM-18537-92 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000004868|refseq:NP_013982.1|dip:DIP-1254N|mint:Q04839|ensemblfungi:YMR255W(gene)|ensemblfungi:YMR255W_mRNA(transcript)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0015031"(protein transport)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044877"(protein-containing complex binding)|rcsb pdb:3LCN sgd:S000002366|refseq:NP_010074.1|mint:Q12315|dip:DIP-2350N|ensemblfungi:YDL207W(gene)|ensemblfungi:YDL207W_mRNA(transcript)|go:"GO:0000822"(inositol hexakisphosphate binding)|go:"GO:0005543"(phospholipid binding)|go:"GO:0005643"(nuclear pore)|go:"GO:0005737"(cytoplasm)|go:"GO:0005739"(mitochondrion)|go:"GO:0006397"(mRNA processing)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0006409"(tRNA export from nucleus)|go:"GO:0006446"(regulation of translational initiation)|go:"GO:0006449"(regulation of translational termination)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0015031"(protein transport)|go:"GO:0016973"("poly(A)+ mRNA export from nucleus")|go:"GO:0031369"(translation initiation factor binding)|go:"GO:0031965"(nuclear membrane)|go:"GO:0044614"(nuclear pore cytoplasmic filaments)|interpro:IPR012476(GLE1-like)|interpro:IPR038506|rcsb pdb:3PEU|rcsb pdb:3PEV|rcsb pdb:3RRM|rcsb pdb:3RRN|rcsb pdb:6B4E - - crc64:C9C6B1513AF95711 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:2IqMWMpym7QObadY7Qq00tunNHs559292 rogid:1RI51/DOenI6DQvh2tErmJnDffI559292 intact-crc:ED996A97C42C0E51|rigid:o/vz9RU/wzkylYKK0i45W8C+t/g false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P11747 uniprotkb:Q12030 intact:EBI-18897|uniprotkb:D6W0I7|ensemblfungi:YML098W intact:EBI-18889|uniprotkb:D6VSE7|ensemblfungi:YDR167W psi-mi:taf13_yeast(display_long)|uniprotkb:TAF13(gene name)|psi-mi:TAF13(display_short)|uniprotkb:FUN81(gene name synonym)|uniprotkb:TAF19(gene name synonym)|uniprotkb:YML098W(locus name)|uniprotkb:TBP-associated factor 13(gene name synonym)|uniprotkb:TBP-associated factor 19 kDa(gene name synonym)|uniprotkb:TAFII-19(gene name synonym)|uniprotkb:Function unknown 81 protein(gene name synonym) psi-mi:taf10_yeast(display_long)|uniprotkb:TAF25(gene name synonym)|uniprotkb:TAFII-23(gene name synonym)|uniprotkb:TAFII-25(gene name synonym)|uniprotkb:TBP-associated factor 10(gene name synonym)|uniprotkb:TBP-associated factor 25 kDa(gene name synonym)|uniprotkb:YD9489.02(orf name)|uniprotkb:YDR167W(locus name)|uniprotkb:TAF10(gene name)|psi-mi:TAF10(display_short)|uniprotkb:TAF23(gene name synonym)|uniprotkb:p25(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473203|imex:IM-18537-90 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013611.1|sgd:S000004564|ensemblfungi:YML098W(gene)|ensemblfungi:YML098W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|interpro:IPR003195(Transcription initiation factor IID, 18 kDa subunit)|interpro:IPR009072(Histone-fold)|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|dip:DIP-2054N|mint:P11747 sgd:S000002574|ensemblfungi:YDR167W(gene)|ensemblfungi:YDR167W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003923(Transcription initiation factor TFIID, 23-30 kDa subunit)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|refseq:NP_010451.3|dip:DIP-855N|mint:Q12030 - - crc64:A472CCA10DC3B495 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:N+MUCqLYlBQa1L2NcpyY5ImMIYM559292 rogid:L0BbPHEqUJ/TjaYNF96aRV4Ou0k559292 intact-crc:059734792A116F1D|rigid:CGQuKq+CtPKI1AR0MuN98cEZcoQ false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q54801 uniprotkb:Q97SJ0 intact:EBI-6473264|ensemblbacteria:AAK75658|uniprotkb:O08440|uniprotkb:O08443|uniprotkb:Q54973|uniprotkb:O08442|uniprotkb:O08441 intact:EBI-6473258|ensemblbacteria:AAK74538 psi-mi:dyr_strpn(display_long)|uniprotkb:dfr(gene name synonym)|uniprotkb:SP_1571(locus name)|uniprotkb:dhfR(gene name)|psi-mi:dhfR(display_short) psi-mi:y371_strpn(display_long)|uniprotkb:SP_0371(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473261|imex:IM-18537-95 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0004146"(dihydrofolate reductase activity)|go:"GO:0006545"(glycine biosynthetic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050661"(NADP binding)|ensemblbacteria:AAK75658(transcript)|ensemblbacteria:SP_1571(gene)|refseq:WP_000162484.1|interpro:IPR001796(Dihydrofolate reductase region)|interpro:IPR012259(Dihydrofolate reductase)|interpro:IPR017925|interpro:IPR024072|rcsb pdb:3IX9 ensemblbacteria:AAK74538(transcript)|ensemblbacteria:SP_0371(gene)|refseq:WP_000179547.1|interpro:IPR010697(Protein of unknown function DUF1273) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:QTOgzsCX1HBVUuCL+SnC6fhEw7E170187 rogid:hw4QDd/4VczEPOg7fxVCWbaW+4g170187 intact-crc:6D52D9C24383A64F|rigid:qcK555B6Nk1sT8AEfbMi9uAgCEg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q12499 uniprotkb:P15646 intact:EBI-12126|uniprotkb:D6W309|ensemblfungi:YOR310C intact:EBI-6838|uniprotkb:P89890|uniprotkb:D6VRX5|ensemblfungi:YDL014W psi-mi:nop58_yeast(display_long)|uniprotkb:Nucleolar protein 5(gene name synonym)|uniprotkb:NOP58(gene name)|psi-mi:NOP58(display_short)|uniprotkb:NOP5(gene name synonym)|uniprotkb:YOR310C(locus name)|uniprotkb:O6108(orf name) psi-mi:fbrl_yeast(display_long)|uniprotkb:NOP1(gene name)|psi-mi:NOP1(display_short)|uniprotkb:LOT3(gene name synonym)|uniprotkb:YDL014W(locus name)|uniprotkb:D2870(orf name)|uniprotkb:U3 small nucleolar RNA-associated protein NOP1(gene name synonym)|uniprotkb:Histone-glutamine methyltransferase(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473247|imex:IM-18537-94 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YOR310C(gene)|ensemblfungi:YOR310C_mRNA(transcript)|go:"GO:0000472"("endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0000480"("endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003729"(mRNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0000447"("endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005730"(nucleolus)|go:"GO:0006364"(rRNA processing)|go:"GO:0017069"(snRNA binding)|go:"GO:0030515"(snoRNA binding)|go:"GO:0030686"(90S preribosome)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:1902570"(protein localization to nucleolus)|interpro:IPR002687(Pre-mRNA processing ribonucleoprotein, binding region)|interpro:IPR012974(NOP5, N-terminal)|interpro:IPR012976(NOSIC)|interpro:IPR036070|interpro:IPR042239|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-4570464|reactome:R-SCE-6791226|rcsb pdb:6ZQC|refseq:NP_014955.1|sgd:S000005837|dip:DIP-5843N|mint:Q12499 refseq:NP_010270.1|sgd:S000002172|mint:P15646|dip:DIP-698N|ensemblfungi:YDL014W(gene)|ensemblfungi:YDL014W_mRNA(transcript)|go:"GO:0000451"(rRNA 2'-O-methylation)|go:"GO:0000494"(box C/D RNA 3'-end processing)|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0006356"(regulation of transcription by RNA polymerase I)|go:"GO:0006364"(rRNA processing)|go:"GO:0008171"(O-methyltransferase activity)|go:"GO:0008649"(rRNA methyltransferase activity)|go:"GO:0030686"(90S preribosome)|go:"GO:0031167"(rRNA methylation)|go:"GO:0031428"(box C/D RNP complex)|go:"GO:0032040"(small-subunit processome)|go:"GO:0043144"("sno(s)RNA processing")|go:"GO:1990258"(histone glutamine methylation)|go:"GO:1990259"(histone-glutamine methyltransferase activity)|interpro:IPR000692(Fibrillarin)|interpro:IPR020813|interpro:IPR029063|rcsb pdb:5WLC|rcsb pdb:5WYJ|rcsb pdb:5WYK|rcsb pdb:6KE6|rcsb pdb:6LQP|rcsb pdb:6LQQ|rcsb pdb:6LQR|rcsb pdb:6LQS|rcsb pdb:6LQT|rcsb pdb:6LQU|rcsb pdb:6LQV|rcsb pdb:6ND4|rcsb pdb:6ZDT|rcsb pdb:6ZQA|rcsb pdb:6ZQB|rcsb pdb:6ZQC|rcsb pdb:6ZQD|rcsb pdb:6ZQE|rcsb pdb:7AJT|rcsb pdb:7AJU|reactome:R-SCE-6791226 - crc64:8A2889448B2A19E2 crc64:56A8B958A7B6066E figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Dtk1A6GOVO3KgTak8cTHjO+eDQ4559292 rogid:zc81RbHf8PxId/8oPXPD3/MpmBU559292 intact-crc:2A172EEF09DFE093|rigid:CzuZFSvnqxLvqFMcpK6yC+3WZBg false myc tag:n-n("MI:0522") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P39743 uniprotkb:Q12446 intact:EBI-14500|uniprotkb:D6VT22|ensemblfungi:YDR388W intact:EBI-10022|uniprotkb:D6W2N7|ensemblfungi:YOR181W psi-mi:rv167_yeast(display_long)|uniprotkb:D9509.8(orf name)|uniprotkb:YDR388W(locus name)|uniprotkb:RVS167(gene name)|psi-mi:RVS167(display_short) psi-mi:las17_yeast(display_long)|uniprotkb:LAS17(gene name)|psi-mi:LAS17(display_short)|uniprotkb:YOR181W(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473236|imex:IM-18537-93 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YDR388W(gene)|ensemblfungi:YDR388W_mRNA(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0005516"(calmodulin binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005934"(cellular bud tip)|go:"GO:0006897"(endocytosis)|go:"GO:0008092"(cytoskeletal protein binding)|go:"GO:0016192"(vesicle-mediated transport)|go:"GO:0030479"(actin cortical patch)|go:"GO:0031097"(medial cortex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042803"(protein homodimerization activity)|go:"GO:0043332"(mating projection tip)|go:"GO:0051666"(actin cortical patch localization)|go:"GO:0060988"(lipid tube assembly)|go:"GO:0072741"(protein localization to cell division site)|go:"GO:0097320"(plasma membrane tubulation)|go:"GO:1903475"(mitotic actomyosin contractile ring assembly)|interpro:IPR001452(Src homology-3)|interpro:IPR004148(BAR)|interpro:IPR027267|interpro:IPR036028|go:"GO:1990528"(Rvs161p-Rvs167p complex)|refseq:NP_010676.1|sgd:S000002796|mint:P39743|dip:DIP-770N refseq:NP_014824.1|sgd:S000005707|ensemblfungi:YOR181W(gene)|ensemblfungi:YOR181W_mRNA(transcript)|go:"GO:0003779"(actin binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007015"(actin filament organization)|go:"GO:0030041"(actin filament polymerization)|go:"GO:0030479"(actin cortical patch)|go:"GO:0032233"(positive regulation of actin filament bundle assembly)|go:"GO:0043332"(mating projection tip)|go:"GO:0045010"(actin nucleation)|go:"GO:0051666"(actin cortical patch localization)|go:"GO:0071933"(Arp2/3 complex binding)|go:"GO:0140224"(SLAC complex)|go:"GO:2000601"(positive regulation of Arp2/3 complex-mediated actin nucleation)|interpro:IPR000697(EVH1)|interpro:IPR003124(Actin-binding WH2)|interpro:IPR011993(Pleckstrin homology-type)|interpro:IPR027641|interpro:IPR033927|rcsb pdb:1ZUK|dip:DIP-963N|mint:Q12446 - crc64:3F0AB53EBCC95A5B crc64:4488355563AA2645 figure legend:table S2|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:w3CZzhpvanHbodoFFlzkAHnsQyA559292 rogid:TfQ256gBQPp1T8Ntu2AvktFnypA559292 intact-crc:0EE0AA3197B615E0|rigid:c8HnSgNyyaV3RXaZHLTwYNamm1w false t7 tag:n-n("MI:0523") myc tag:n-n("MI:0522") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB1 uniprotkb:P67330 intact:EBI-6472917|ensemblbacteria:AAK75366|ensemblbacteria:AAK75538|ensemblbacteria:AAK75771 intact:EBI-6472913|ensemblbacteria:AAK74282|uniprotkb:Q97T60 psi-mi:a0a0h2uqb1_strpn(display_long)|uniprotkb:SP_1262(locus name)|uniprotkb:SP_1444(locus name)|uniprotkb:SP_1692(locus name) psi-mi:trho_strpn(display_long)|uniprotkb:trhO(gene name)|psi-mi:trhO(display_short)|uniprotkb:tRNA hydroxylation protein O(gene name synonym)|uniprotkb:SP_0095(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473303|imex:IM-18537-98 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75366(transcript)|ensemblbacteria:AAK75538(transcript)|ensemblbacteria:AAK75771(transcript)|ensemblbacteria:SP_1262(gene)|ensemblbacteria:SP_1444(gene)|ensemblbacteria:SP_1692(gene)|interpro:IPR032877|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97CV3(uniprot-removed-ac)|refseq:WP_000436399.1 ensemblbacteria:AAK74282(transcript)|ensemblbacteria:SP_0095(gene)|go:"GO:0006400"(tRNA modification)|go:"GO:0016705"(oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen)|interpro:IPR040503|refseq:WP_001030031.1|interpro:IPR001763(Rhodanese-like)|interpro:IPR020936|interpro:IPR022111|interpro:IPR036873 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mKXRtGOe/klxDYsCGGS4XRQ7NrM170187 rogid:7ccMUviJnVXFy4RHhU24TD2efqg170187 intact-crc:E1AD6F4CBEF359B3|rigid:qj5mE/iBjiggPty3c5MmrAFNniI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB1 uniprotkb:P67330 intact:EBI-6472917|ensemblbacteria:AAK75366|ensemblbacteria:AAK75538|ensemblbacteria:AAK75771 intact:EBI-6472913|ensemblbacteria:AAK74282|uniprotkb:Q97T60 psi-mi:a0a0h2uqb1_strpn(display_long)|uniprotkb:SP_1262(locus name)|uniprotkb:SP_1444(locus name)|uniprotkb:SP_1692(locus name) psi-mi:trho_strpn(display_long)|uniprotkb:trhO(gene name)|psi-mi:trhO(display_short)|uniprotkb:tRNA hydroxylation protein O(gene name synonym)|uniprotkb:SP_0095(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473292|imex:IM-18537-97 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75366(transcript)|ensemblbacteria:AAK75538(transcript)|ensemblbacteria:AAK75771(transcript)|ensemblbacteria:SP_1262(gene)|ensemblbacteria:SP_1444(gene)|ensemblbacteria:SP_1692(gene)|interpro:IPR032877|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97CV3(uniprot-removed-ac)|refseq:WP_000436399.1 ensemblbacteria:AAK74282(transcript)|ensemblbacteria:SP_0095(gene)|go:"GO:0006400"(tRNA modification)|go:"GO:0016705"(oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen)|interpro:IPR040503|refseq:WP_001030031.1|interpro:IPR001763(Rhodanese-like)|interpro:IPR020936|interpro:IPR022111|interpro:IPR036873 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mKXRtGOe/klxDYsCGGS4XRQ7NrM170187 rogid:7ccMUviJnVXFy4RHhU24TD2efqg170187 intact-crc:5C5F8BF7FA4CC2C7|rigid:qj5mE/iBjiggPty3c5MmrAFNniI false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q54801 uniprotkb:Q97SJ0 intact:EBI-6473264|ensemblbacteria:AAK75658|uniprotkb:O08440|uniprotkb:O08443|uniprotkb:Q54973|uniprotkb:O08442|uniprotkb:O08441 intact:EBI-6473258|ensemblbacteria:AAK74538 psi-mi:dyr_strpn(display_long)|uniprotkb:dfr(gene name synonym)|uniprotkb:SP_1571(locus name)|uniprotkb:dhfR(gene name)|psi-mi:dhfR(display_short) psi-mi:y371_strpn(display_long)|uniprotkb:SP_0371(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473281|imex:IM-18537-96 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0004146"(dihydrofolate reductase activity)|go:"GO:0006545"(glycine biosynthetic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050661"(NADP binding)|ensemblbacteria:AAK75658(transcript)|ensemblbacteria:SP_1571(gene)|refseq:WP_000162484.1|interpro:IPR001796(Dihydrofolate reductase region)|interpro:IPR012259(Dihydrofolate reductase)|interpro:IPR017925|interpro:IPR024072|rcsb pdb:3IX9 ensemblbacteria:AAK74538(transcript)|ensemblbacteria:SP_0371(gene)|refseq:WP_000179547.1|interpro:IPR010697(Protein of unknown function DUF1273) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:QTOgzsCX1HBVUuCL+SnC6fhEw7E170187 rogid:hw4QDd/4VczEPOg7fxVCWbaW+4g170187 intact-crc:D0A03D79073C3D3B|rigid:qcK555B6Nk1sT8AEfbMi9uAgCEg false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2USB7 uniprotkb:A0A0H2UQB7 intact:EBI-6473320|ensemblbacteria:AAK76260 intact:EBI-6473317|ensemblbacteria:AAK75384 psi-mi:a0a0h2usb7_strpn(display_long)|uniprotkb:SP_2209(locus name) psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473314|imex:IM-18537-99 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76260(transcript)|ensemblbacteria:SP_2209(gene)|interpro:IPR001498(Protein of unknown function UPF0029, N-terminal)|interpro:IPR015269(Region of unknown function DUF1949)|interpro:IPR015796(Protein of unknown function UPF0029)|interpro:IPR020568|interpro:IPR020569|interpro:IPR023582|uniprotkb:Q97N58(uniprot-removed-ac)|refseq:WP_000395742.1|interpro:IPR035647|interpro:IPR036956 ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:kYli68O6LYFOo36PukfRG03z740170187 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 intact-crc:C1480A51993F8017|rigid:gOk/T4xDZh2WCRGle+dBeFaDX+Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US55 uniprotkb:A0A0H2US72 intact:EBI-6473337|ensemblbacteria:AAK76246 intact:EBI-6473331|ensemblbacteria:AAK76253 psi-mi:a0a0h2us55_strpn(display_long)|uniprotkb:SP_2195(locus name)|uniprotkb:ctsR(gene name)|psi-mi:ctsR(display_short) psi-mi:a0a0h2us72_strpn(display_long)|uniprotkb:SP_2202(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473334|imex:IM-18537-100 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR040465|ensemblbacteria:AAK76246(transcript)|ensemblbacteria:SP_2195(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR008463(Firmicute transcriptional repressor of class III stress genes)|uniprotkb:Q97N71(uniprot-removed-ac)|refseq:WP_001211273.1|interpro:IPR041473|interpro:IPR041902|interpro:IPR041908 rcsb pdb:3FB9|refseq:WP_001278167.1|ensemblbacteria:AAK76253(transcript)|ensemblbacteria:SP_2202(gene)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR009366(Protein of unknown function DUF1021)|uniprotkb:Q97N65(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UQmcmDlCnmdvfzqoUbkYbfzJBl4170187 rogid:oaRQUFFzOseYAupezxIoU2yjbnY170187 intact-crc:783798FBE8CC074C|rigid:gMrAKSrKftpWWeriPGry9c9xssc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US55 uniprotkb:A0A0H2US72 intact:EBI-6473337|ensemblbacteria:AAK76246 intact:EBI-6473331|ensemblbacteria:AAK76253 psi-mi:a0a0h2us55_strpn(display_long)|uniprotkb:SP_2195(locus name)|uniprotkb:ctsR(gene name)|psi-mi:ctsR(display_short) psi-mi:a0a0h2us72_strpn(display_long)|uniprotkb:SP_2202(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473349|imex:IM-18537-101 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR040465|ensemblbacteria:AAK76246(transcript)|ensemblbacteria:SP_2195(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR008463(Firmicute transcriptional repressor of class III stress genes)|uniprotkb:Q97N71(uniprot-removed-ac)|refseq:WP_001211273.1|interpro:IPR041473|interpro:IPR041902|interpro:IPR041908 rcsb pdb:3FB9|refseq:WP_001278167.1|ensemblbacteria:AAK76253(transcript)|ensemblbacteria:SP_2202(gene)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR009366(Protein of unknown function DUF1021)|uniprotkb:Q97N65(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UQmcmDlCnmdvfzqoUbkYbfzJBl4170187 rogid:oaRQUFFzOseYAupezxIoU2yjbnY170187 intact-crc:C5C57C40AC739C38|rigid:gMrAKSrKftpWWeriPGry9c9xssc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URZ6 uniprotkb:A0A0H2UQJ4 intact:EBI-6473382|ensemblbacteria:AAK76201 intact:EBI-6473388|ensemblbacteria:AAK75383 psi-mi:a0a0h2urz6_strpn(display_long)|uniprotkb:SP_2144(locus name) psi-mi:a0a0h2uqj4_strpn(display_long)|uniprotkb:nth(gene name)|psi-mi:nth(display_short)|uniprotkb:"DNA-(apurinic or apyrimidinic site) lyase"(gene name synonym)|uniprotkb:SP_1279(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473385|imex:IM-18537-104 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76201(transcript)|ensemblbacteria:SP_2144(gene)|go:"GO:0005975"(carbohydrate metabolic process)|rcsb pdb:3QPF|rcsb pdb:3QRY|rcsb pdb:3QSP|interpro:IPR008313(Uncharacterised conserved protein UCP028846)|interpro:IPR008928(Six-hairpin glycosidase-like)|uniprotkb:Q97NA8(uniprot-removed-ac)|refseq:WP_000263078.1|interpro:IPR012341(Six-hairpin glycosidase) ensemblbacteria:AAK75383(transcript)|ensemblbacteria:SP_1279(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006284"(base-excision repair)|go:"GO:0019104"(DNA N-glycosylase activity)|go:"GO:0140078"("class I DNA-(apurinic or apyrimidinic site) endonuclease activity")|interpro:IPR000445(Helix-hairpin-helix motif)|interpro:IPR003265(HhH-GPD)|interpro:IPR004036(Endonuclease III, conserved site-2)|interpro:IPR005759(Endonuclease III/Nth)|interpro:IPR011257(DNA glycosylase)|interpro:IPR023170|uniprotkb:Q97QE0(uniprot-removed-ac)|refseq:WP_000244451.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:lDa+VJDct11ctEacrkPIrsqrI3I170187 rogid:VdV0oYrPwXMvo+lDV0i/hrf+3m0170187 intact-crc:891DF3D72CB78E89|rigid:mSFknW5aLl0z2H5zlMBqsCAkWYk false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US55 uniprotkb:A0A0H2US72 intact:EBI-6473337|ensemblbacteria:AAK76246 intact:EBI-6473331|ensemblbacteria:AAK76253 psi-mi:a0a0h2us55_strpn(display_long)|uniprotkb:SP_2195(locus name)|uniprotkb:ctsR(gene name)|psi-mi:ctsR(display_short) psi-mi:a0a0h2us72_strpn(display_long)|uniprotkb:SP_2202(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473360|imex:IM-18537-102 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR040465|ensemblbacteria:AAK76246(transcript)|ensemblbacteria:SP_2195(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR008463(Firmicute transcriptional repressor of class III stress genes)|uniprotkb:Q97N71(uniprot-removed-ac)|refseq:WP_001211273.1|interpro:IPR041473|interpro:IPR041902|interpro:IPR041908 rcsb pdb:3FB9|refseq:WP_001278167.1|ensemblbacteria:AAK76253(transcript)|ensemblbacteria:SP_2202(gene)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR009366(Protein of unknown function DUF1021)|uniprotkb:Q97N65(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UQmcmDlCnmdvfzqoUbkYbfzJBl4170187 rogid:oaRQUFFzOseYAupezxIoU2yjbnY170187 intact-crc:2D5FF888EE1DBC9A|rigid:gMrAKSrKftpWWeriPGry9c9xssc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US72 uniprotkb:A0A0H2US55 intact:EBI-6473331|ensemblbacteria:AAK76253 intact:EBI-6473337|ensemblbacteria:AAK76246 psi-mi:a0a0h2us72_strpn(display_long)|uniprotkb:SP_2202(locus name) psi-mi:a0a0h2us55_strpn(display_long)|uniprotkb:SP_2195(locus name)|uniprotkb:ctsR(gene name)|psi-mi:ctsR(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473371|imex:IM-18537-103 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:3FB9|refseq:WP_001278167.1|ensemblbacteria:AAK76253(transcript)|ensemblbacteria:SP_2202(gene)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR009366(Protein of unknown function DUF1021)|uniprotkb:Q97N65(uniprot-removed-ac) interpro:IPR040465|ensemblbacteria:AAK76246(transcript)|ensemblbacteria:SP_2195(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0042981"(regulation of apoptotic process)|interpro:IPR001315(Caspase Recruitment)|interpro:IPR008463(Firmicute transcriptional repressor of class III stress genes)|uniprotkb:Q97N71(uniprot-removed-ac)|refseq:WP_001211273.1|interpro:IPR041473|interpro:IPR041902|interpro:IPR041908 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:oaRQUFFzOseYAupezxIoU2yjbnY170187 rogid:UQmcmDlCnmdvfzqoUbkYbfzJBl4170187 intact-crc:90AD1C33AAA227EE|rigid:gMrAKSrKftpWWeriPGry9c9xssc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF8 uniprotkb:A0A0H2US62 intact:EBI-6473400|ensemblbacteria:AAK75822 intact:EBI-6473406|ensemblbacteria:AAK76186 psi-mi:a0a0h2urf8_strpn(display_long)|uniprotkb:SP_1746(locus name) psi-mi:a0a0h2us62_strpn(display_long)|uniprotkb:SP_2128(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473417|imex:IM-18537-106 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75822(transcript)|ensemblbacteria:SP_1746(gene)|refseq:WP_000121667.1|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR005249(Conserved hypothetical protein CHP00488)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|uniprotkb:Q97P95(uniprot-removed-ac) ensemblbacteria:AAK76186(transcript)|ensemblbacteria:SP_2128(gene)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR029061|uniprotkb:Q97NC3(uniprot-removed-ac)|refseq:WP_000603787.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:RiHnV4CEOcEnMlA9V7Oiu3gcSlM170187 rogid:c4nqm9YUoYAjYwiZ58V+1l+CNz0170187 intact-crc:BEAB3734FB6F4E47|rigid:/yrlewvuMWp1EGlyyKbDZjOfMys false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF0 uniprotkb:Q97NE3 intact:EBI-6472153|ensemblbacteria:AAK75923 intact:EBI-6472146|ensemblbacteria:AAK76159 psi-mi:a0a0h2urf0_strpn(display_long)|uniprotkb:SP_1851(locus name) psi-mi:syy_strpn(display_long)|uniprotkb:Tyrosyl-tRNA synthetase(gene name synonym)|uniprotkb:SP_2100(locus name)|uniprotkb:tyrS(gene name)|psi-mi:tyrS(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473428|imex:IM-18537-107 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75923(transcript)|ensemblbacteria:SP_1851(gene)|go:"GO:0047617"(acyl-CoA hydrolase activity)|rcsb pdb:4I82|interpro:IPR003736(Phenylacetic acid degradation-related protein)|interpro:IPR006683(Thioesterase superfamily)|interpro:IPR029069|uniprotkb:Q97NZ8(uniprot-removed-ac)|refseq:WP_000651213.1|interpro:IPR039298 ensemblbacteria:AAK76159(transcript)|ensemblbacteria:SP_2100(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0004831"(tyrosine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006437"(tyrosyl-tRNA aminoacylation)|refseq:WP_000546887.1|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002305(Aminoacyl-tRNA synthetase, class Ib)|interpro:IPR002307(Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)|interpro:IPR002942(RNA-binding S4)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR024088|interpro:IPR024107|interpro:IPR036986 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Nm8s+TWvLS7fI50ADYOCEUZktYk170187 rogid:WNM9U67JY/53kDeCA4jxCjBn3LA170187 intact-crc:0AE9261F07A739F1|rigid:nasMw0ZXykNr9Xbb+toZOR9QPAY false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF8 uniprotkb:A0A0H2US62 intact:EBI-6473400|ensemblbacteria:AAK75822 intact:EBI-6473406|ensemblbacteria:AAK76186 psi-mi:a0a0h2urf8_strpn(display_long)|uniprotkb:SP_1746(locus name) psi-mi:a0a0h2us62_strpn(display_long)|uniprotkb:SP_2128(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473403|imex:IM-18537-105 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75822(transcript)|ensemblbacteria:SP_1746(gene)|refseq:WP_000121667.1|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR005249(Conserved hypothetical protein CHP00488)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|uniprotkb:Q97P95(uniprot-removed-ac) ensemblbacteria:AAK76186(transcript)|ensemblbacteria:SP_2128(gene)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR029061|uniprotkb:Q97NC3(uniprot-removed-ac)|refseq:WP_000603787.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:RiHnV4CEOcEnMlA9V7Oiu3gcSlM170187 rogid:c4nqm9YUoYAjYwiZ58V+1l+CNz0170187 intact-crc:0359D38FBFD0D533|rigid:/yrlewvuMWp1EGlyyKbDZjOfMys false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NE3 uniprotkb:A0A0H2URF0 intact:EBI-6472146|ensemblbacteria:AAK76159 intact:EBI-6472153|ensemblbacteria:AAK75923 psi-mi:syy_strpn(display_long)|uniprotkb:Tyrosyl-tRNA synthetase(gene name synonym)|uniprotkb:SP_2100(locus name)|uniprotkb:tyrS(gene name)|psi-mi:tyrS(display_short) psi-mi:a0a0h2urf0_strpn(display_long)|uniprotkb:SP_1851(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473439|imex:IM-18537-108 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76159(transcript)|ensemblbacteria:SP_2100(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0004831"(tyrosine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006437"(tyrosyl-tRNA aminoacylation)|refseq:WP_000546887.1|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002305(Aminoacyl-tRNA synthetase, class Ib)|interpro:IPR002307(Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)|interpro:IPR002942(RNA-binding S4)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR024088|interpro:IPR024107|interpro:IPR036986 ensemblbacteria:AAK75923(transcript)|ensemblbacteria:SP_1851(gene)|go:"GO:0047617"(acyl-CoA hydrolase activity)|rcsb pdb:4I82|interpro:IPR003736(Phenylacetic acid degradation-related protein)|interpro:IPR006683(Thioesterase superfamily)|interpro:IPR029069|uniprotkb:Q97NZ8(uniprot-removed-ac)|refseq:WP_000651213.1|interpro:IPR039298 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:WNM9U67JY/53kDeCA4jxCjBn3LA170187 rogid:Nm8s+TWvLS7fI50ADYOCEUZktYk170187 intact-crc:B71BC2A44318A285|rigid:nasMw0ZXykNr9Xbb+toZOR9QPAY false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQN3 uniprotkb:A0A0H2US45 intact:EBI-6473456|ensemblbacteria:AAK75559 intact:EBI-6473450|ensemblbacteria:AAK76153 psi-mi:a0a0h2uqn3_strpn(display_long)|uniprotkb:SP_1465(locus name) psi-mi:a0a0h2us45_strpn(display_long)|uniprotkb:SP_2094(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473453|imex:IM-18537-109 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75559(transcript)|ensemblbacteria:SP_1465(gene)|refseq:WP_000858730.1|interpro:IPR014975(Protein of unknown function DUF1836)|uniprotkb:Q97PX5(uniprot-removed-ac) ensemblbacteria:AAK76153(transcript)|ensemblbacteria:SP_2094(gene)|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000658497.1|interpro:IPR022764|uniprotkb:Q97NE9(uniprot-removed-ac)|interpro:IPR035952 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:U2gnyMn706LaFzj+xof1LxVuvHg170187 rogid:uvx5lqDMYXIF/sFFSHUOVnY7qbM170187 intact-crc:5A1BCA7C68C657C6|rigid:RcjPmIv8GDbCDkUpv/A+f/LWGYc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US22 uniprotkb:A0A0H2UNK7 intact:EBI-6473503|ensemblbacteria:AAK76112 intact:EBI-6473509|ensemblbacteria:AAK74596 psi-mi:a0a0h2us22_strpn(display_long)|uniprotkb:SP_2048(locus name) psi-mi:a0a0h2unk7_strpn(display_long)|uniprotkb:SP_0434(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473506|imex:IM-18537-112 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76112(transcript)|ensemblbacteria:SP_2048(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000250534.1|interpro:IPR016977(Competence protein ComGF)|uniprotkb:Q97NI0(uniprot-removed-ac) ensemblbacteria:AAK74596(transcript)|ensemblbacteria:SP_0434(gene)|refseq:WP_000510591.1|interpro:IPR005531(Protein of unknown function DUF322)|uniprotkb:Q97SE9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jrMnAggqBZKvSezCGr/UY2oeoXc170187 rogid:MlVqPN+ISxXzAsd/kLnJpGpTBZI170187 intact-crc:DEF6D344F08A40FF|rigid:8neyXHaED9N+hARh+TMeUHtvHUQ false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN59 uniprotkb:A0A0H2USB8 intact:EBI-6473485|ensemblbacteria:AAK74380 intact:EBI-6473489|ensemblbacteria:AAK76125 psi-mi:a0a0h2un59_strpn(display_long)|uniprotkb:SP_0200(locus name)|uniprotkb:ccs4(gene name)|psi-mi:ccs4(display_short) psi-mi:a0a0h2usb8_strpn(display_long)|uniprotkb:SP_2061(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473492|imex:IM-18537-111 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74380(transcript)|ensemblbacteria:SP_0200(gene)|go:"GO:0016021"(integral component of membrane)|uniprotkb:Q97SW4(uniprot-removed-ac) ensemblbacteria:AAK76125(transcript)|ensemblbacteria:SP_2061(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000022518.1|interpro:IPR009732(Protein of unknown function DUF1304)|uniprotkb:Q97NG8(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:R16nrXY3aNIq4ebxKQv7Z4S9jME170187 rogid:ufeNuLyS9WxC5jdWp9tKA6c5rx4170187 intact-crc:61A1C5CCDC81DA08|rigid:BEmfPPoWIgGIyS/SWlFzBwgCfcM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NF1 uniprotkb:Q97QD1 intact:EBI-6473470|ensemblbacteria:AAK76150 intact:EBI-6473467|ensemblbacteria:AAK75392 psi-mi:gpda_strpn(display_long)|uniprotkb:"NAD(P)H-dependent glycerol-3-phosphate dehydrogenase"(gene name synonym)|uniprotkb:SP_2091(locus name)|uniprotkb:gpsA(gene name)|psi-mi:gpsA(display_short) psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473474|imex:IM-18537-110 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76150(transcript)|ensemblbacteria:SP_2091(gene)|go:"GO:0004367"(glycerol-3-phosphate dehydrogenase [NAD+] activity)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006650"(glycerophospholipid metabolic process)|go:"GO:0008654"(phospholipid biosynthetic process)|go:"GO:0009331"(glycerol-3-phosphate dehydrogenase complex)|go:"GO:0046167"(glycerol-3-phosphate biosynthetic process)|go:"GO:0046168"(glycerol-3-phosphate catabolic process)|go:"GO:0051287"(NAD binding)|go:"GO:0106257"(glycerol-3-phosphate dehydrogenase [NADP+] activity)|refseq:WP_000415103.1|interpro:IPR006109(NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal)|interpro:IPR006168(NAD-dependent glycerol-3-phosphate dehydrogenase)|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR011128(NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal)|interpro:IPR013328(Dehydrogenase, multihelical)|interpro:IPR036291 ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:xOWe8FcRiKw/NLhkbP4r0LcRjfI170187 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 intact-crc:CE91B01031954BD4|rigid:zIk+bez5Vsebi1I2qyWvGIRfhn0 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URR7 uniprotkb:A0A0H2UNJ6 intact:EBI-6473534|ensemblbacteria:AAK76075 intact:EBI-6473531|ensemblbacteria:AAK74572 psi-mi:a0a0h2urr7_strpn(display_long)|uniprotkb:SP_2008(locus name) psi-mi:a0a0h2unj6_strpn(display_long)|uniprotkb:SP_0409(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473537|imex:IM-18537-114 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76075(transcript)|ensemblbacteria:SP_2008(gene)|go:"GO:0006605"(protein targeting)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001210991.1|interpro:IPR001901(Protein secE/sec61-gamma protein)|interpro:IPR005807(SecE subunit of protein translocation complex)|interpro:IPR038379|uniprotkb:Q97NL5(uniprot-removed-ac) ensemblbacteria:AAK74572(transcript)|ensemblbacteria:SP_0409(gene)|go:"GO:0051920"(peroxiredoxin activity)|refseq:WP_000206761.1|interpro:IPR003779(Carboxymuconolactone decarboxylase)|interpro:IPR004675(Alkylhydroperoxidase AhpD core)|interpro:IPR029032|uniprotkb:Q97SG2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:y6HMZbFjVcyoUrrG3Mqky2TVpdQ170187 rogid:kvFpxL+7bVFbFOM76jAW4aXbxk0170187 intact-crc:C60EE675A5128417|rigid:hgSJGqcpAX9RKj/ct6aUd8s/+BE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNK7 uniprotkb:A0A0H2US22 intact:EBI-6473509|ensemblbacteria:AAK74596 intact:EBI-6473503|ensemblbacteria:AAK76112 psi-mi:a0a0h2unk7_strpn(display_long)|uniprotkb:SP_0434(locus name) psi-mi:a0a0h2us22_strpn(display_long)|uniprotkb:SP_2048(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473520|imex:IM-18537-113 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74596(transcript)|ensemblbacteria:SP_0434(gene)|refseq:WP_000510591.1|interpro:IPR005531(Protein of unknown function DUF322)|uniprotkb:Q97SE9(uniprot-removed-ac) ensemblbacteria:AAK76112(transcript)|ensemblbacteria:SP_2048(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000250534.1|interpro:IPR016977(Competence protein ComGF)|uniprotkb:Q97NI0(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:MlVqPN+ISxXzAsd/kLnJpGpTBZI170187 rogid:jrMnAggqBZKvSezCGr/UY2oeoXc170187 intact-crc:630437FFB435DB8B|rigid:8neyXHaED9N+hARh+TMeUHtvHUQ false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP89 uniprotkb:A0A0H2URQ2 intact:EBI-6473554|ensemblbacteria:AAK74797 intact:EBI-6473548|ensemblbacteria:AAK76054 psi-mi:a0a0h2up89_strpn(display_long)|uniprotkb:SP_0652(locus name) psi-mi:a0a0h2urq2_strpn(display_long)|uniprotkb:SP_1987(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473551|imex:IM-18537-115 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74797(transcript)|ensemblbacteria:SP_0652(gene)|refseq:WP_000828430.1|interpro:IPR010719(Putative rRNA methylase)|interpro:IPR029063|uniprotkb:Q97RY1(uniprot-removed-ac) ensemblbacteria:AAK76054(transcript)|ensemblbacteria:SP_1987(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000565531.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR019895|interpro:IPR027417|uniprotkb:Q97NN3(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Z+eMVyw4uX/sN0xzz3xKJwpaJZI170187 rogid:ZK+YxRxxMqwXGlRm+aBG5Ogx5YU170187 intact-crc:47FDC57F0E4A942E|rigid:RcsEotpJlmb2Q4LooMElfVvabYc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URQ2 uniprotkb:A0A0H2UP89 intact:EBI-6473548|ensemblbacteria:AAK76054 intact:EBI-6473554|ensemblbacteria:AAK74797 psi-mi:a0a0h2urq2_strpn(display_long)|uniprotkb:SP_1987(locus name) psi-mi:a0a0h2up89_strpn(display_long)|uniprotkb:SP_0652(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473565|imex:IM-18537-116 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76054(transcript)|ensemblbacteria:SP_1987(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000565531.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR019895|interpro:IPR027417|uniprotkb:Q97NN3(uniprot-removed-ac) ensemblbacteria:AAK74797(transcript)|ensemblbacteria:SP_0652(gene)|refseq:WP_000828430.1|interpro:IPR010719(Putative rRNA methylase)|interpro:IPR029063|uniprotkb:Q97RY1(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ZK+YxRxxMqwXGlRm+aBG5Ogx5YU170187 rogid:Z+eMVyw4uX/sN0xzz3xKJwpaJZI170187 intact-crc:FA0F21C44AF50F5A|rigid:RcsEotpJlmb2Q4LooMElfVvabYc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URQ4 uniprotkb:A0A0H2UQL3 intact:EBI-6473582|ensemblbacteria:AAK76034 intact:EBI-6473576|ensemblbacteria:AAK75526 psi-mi:a0a0h2urq4_strpn(display_long)|uniprotkb:SP_1967(locus name) psi-mi:a0a0h2uql3_strpn(display_long)|uniprotkb:SP_1429(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473579|imex:IM-18537-117 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76034(transcript)|ensemblbacteria:SP_1967(gene)|go:"GO:0004176"(ATP-dependent peptidase activity)|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0008237"(metallopeptidase activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030163"(protein catabolic process)|refseq:WP_000727277.1|interpro:IPR001478(PDZ/DHR/GLGF)|interpro:IPR008269(Peptidase S16, lon C-terminal)|interpro:IPR014721(Ribosomal protein S5 domain 2-type fold)|interpro:IPR020568|interpro:IPR027065|uniprotkb:Q97NQ3(uniprot-removed-ac) ensemblbacteria:AAK75526(transcript)|ensemblbacteria:SP_1429(gene)|refseq:WP_000169112.1|interpro:IPR001539(Peptidase U32)|interpro:IPR032525|uniprotkb:Q97Q04(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:O9o9WTd9glIKuokGp1TbTChvFqM170187 rogid:CguQRj+74Qa+ipwRFL9DG54oC+A170187 intact-crc:869F31CA0C7059DD|rigid:LqGU7CMKeLeGzT26QeDf/JXDdvg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P66444 uniprotkb:A0A0H2URN5 intact:EBI-6472875|ensemblbacteria:AAK74913|uniprotkb:Q97RM8 intact:EBI-6472880|ensemblbacteria:AAK76012 psi-mi:rs16_strpn(display_long)|uniprotkb:SP_0775(locus name)|uniprotkb:rpsP(gene name)|psi-mi:rpsP(display_short) psi-mi:a0a0h2urn5_strpn(display_long)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein TsaE(gene name synonym)|uniprotkb:SP_1944(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473621|imex:IM-18537-120 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74913(transcript)|ensemblbacteria:SP_0775(gene)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|refseq:WP_000268761.1|interpro:IPR000307(Ribosomal protein S16)|interpro:IPR023803 ensemblbacteria:AAK76012(transcript)|ensemblbacteria:SP_1944(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005737"(cytoplasm)|interpro:IPR003442(Protein of unknown function UPF0079, ATPase bacteria)|interpro:IPR027417|uniprotkb:Q97NS3(uniprot-removed-ac)|refseq:WP_000288232.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:WYe3wO5LkcVwpvlh/EUzuROakAM170187 rogid:khiDo+1gWdvZO3BS9UeuWzDR9AU170187 intact-crc:A39A6344006CCBD6|rigid:wW8q/91AhI2xWNjwJfa/PocSpCE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P66444 uniprotkb:A0A0H2URN5 intact:EBI-6472875|ensemblbacteria:AAK74913|uniprotkb:Q97RM8 intact:EBI-6472880|ensemblbacteria:AAK76012 psi-mi:rs16_strpn(display_long)|uniprotkb:SP_0775(locus name)|uniprotkb:rpsP(gene name)|psi-mi:rpsP(display_short) psi-mi:a0a0h2urn5_strpn(display_long)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein TsaE(gene name synonym)|uniprotkb:SP_1944(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473610|imex:IM-18537-119 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74913(transcript)|ensemblbacteria:SP_0775(gene)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005840"(ribosome)|go:"GO:0006412"(translation)|refseq:WP_000268761.1|interpro:IPR000307(Ribosomal protein S16)|interpro:IPR023803 ensemblbacteria:AAK76012(transcript)|ensemblbacteria:SP_1944(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005737"(cytoplasm)|interpro:IPR003442(Protein of unknown function UPF0079, ATPase bacteria)|interpro:IPR027417|uniprotkb:Q97NS3(uniprot-removed-ac)|refseq:WP_000288232.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:WYe3wO5LkcVwpvlh/EUzuROakAM170187 rogid:khiDo+1gWdvZO3BS9UeuWzDR9AU170187 intact-crc:1E6887FF44D350A2|rigid:wW8q/91AhI2xWNjwJfa/PocSpCE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URQ1 uniprotkb:A0A0H2UPK7 intact:EBI-6473593|ensemblbacteria:AAK76023 intact:EBI-6473599|ensemblbacteria:AAK74972 psi-mi:a0a0h2urq1_strpn(display_long)|uniprotkb:SP_1956(locus name) psi-mi:a0a0h2upk7_strpn(display_long)|uniprotkb:SP_0841(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473596|imex:IM-18537-118 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76023(transcript)|ensemblbacteria:SP_1956(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000078816.1|interpro:IPR006541(Bacteriocin-associated integral membrane protein)|uniprotkb:Q97NR2(uniprot-removed-ac) ensemblbacteria:AAK74972(transcript)|ensemblbacteria:SP_0841(gene)|go:"GO:0008168"(methyltransferase activity)|refseq:WP_001809884.1|interpro:IPR007848(Methyltransferase small)|interpro:IPR029063|uniprotkb:Q97RH4(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:b6zCV0uvZ/JyVNvzcInq3dQ2Jy8170187 rogid:fbVYQoZKoUUdPeKJbilVUYYnytE170187 intact-crc:1C1F5487F2B4EE4C|rigid:auCCh59hXHJ5LPdiw2M92RDrO9c false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQC2 uniprotkb:Q97NV6 intact:EBI-6473653|ensemblbacteria:AAK75391 intact:EBI-6473650|ensemblbacteria:AAK75974 psi-mi:a0a0h2uqc2_strpn(display_long)|uniprotkb:ffh(gene name)|psi-mi:ffh(display_short)|uniprotkb:Fifty-four homolog(gene name synonym)|uniprotkb:SP_1287(locus name) psi-mi:y1903_strpn(display_long)|uniprotkb:SP_1903(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473657|imex:IM-18537-122 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75391(transcript)|ensemblbacteria:SP_1287(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|go:"GO:0048500"(signal recognition particle)|refseq:WP_000863628.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR004780(Signal recognition particle, SRP)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|uniprotkb:Q97QD2(uniprot-removed-ac)|interpro:IPR036891|interpro:IPR042101 ensemblbacteria:AAK75974(transcript)|ensemblbacteria:SP_1903(gene)|refseq:WP_000775321.1|interpro:IPR007295(Protein of unknown function DUF402)|interpro:IPR016882(Uncharacterised conserved protein UPF0374)|interpro:IPR035930 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:3mp8fNW3Fz4RqNfd7KxUto17vvs170187 rogid:ACk/tgpcJ++npX546oPs6gaUTw8170187 intact-crc:ED241865F179D0E2|rigid:AOTk/r5Dg8zj0/LTeuWjjR80QYE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQF6 uniprotkb:A0A0H2URR3 intact:EBI-6473635|ensemblbacteria:AAK75349 intact:EBI-6473639|ensemblbacteria:AAK75979 psi-mi:a0a0h2uqf6_strpn(display_long)|uniprotkb:SP_1244(locus name)|uniprotkb:ftsY(gene name)|psi-mi:ftsY(display_short) psi-mi:a0a0h2urr3_strpn(display_long)|uniprotkb:SP_1910(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473632|imex:IM-18537-121 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75349(transcript)|ensemblbacteria:SP_1244(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0031226"(intrinsic component of plasma membrane)|refseq:WP_000522333.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004390(Cell division transporter substrate-binding protein FtsY)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR027417|uniprotkb:Q97QH0(uniprot-removed-ac)|interpro:IPR036225|interpro:IPR042101 interpro:IPR033714|ensemblbacteria:AAK75979(transcript)|ensemblbacteria:SP_1910(gene)|go:"GO:0000049"(tRNA binding)|refseq:WP_000578285.1|interpro:IPR002547(tRNA-binding region)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR027855|uniprotkb:Q97NV1(uniprot-removed-ac)|interpro:IPR037154 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:peDiM+i71zADBHlVpUwakuv4CLE170187 rogid:zrkl2hAxpzZECa/yGaOKsVikhZY170187 intact-crc:8234F6F07A2E9E24|rigid:BnGEBWQdJ3iH/eAsNhknEgXVTsU false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQC2 uniprotkb:Q97NV6 intact:EBI-6473653|ensemblbacteria:AAK75391 intact:EBI-6473650|ensemblbacteria:AAK75974 psi-mi:a0a0h2uqc2_strpn(display_long)|uniprotkb:ffh(gene name)|psi-mi:ffh(display_short)|uniprotkb:Fifty-four homolog(gene name synonym)|uniprotkb:SP_1287(locus name) psi-mi:y1903_strpn(display_long)|uniprotkb:SP_1903(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473668|imex:IM-18537-123 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75391(transcript)|ensemblbacteria:SP_1287(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|go:"GO:0048500"(signal recognition particle)|refseq:WP_000863628.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR004780(Signal recognition particle, SRP)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|uniprotkb:Q97QD2(uniprot-removed-ac)|interpro:IPR036891|interpro:IPR042101 ensemblbacteria:AAK75974(transcript)|ensemblbacteria:SP_1903(gene)|refseq:WP_000775321.1|interpro:IPR007295(Protein of unknown function DUF402)|interpro:IPR016882(Uncharacterised conserved protein UPF0374)|interpro:IPR035930 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:3mp8fNW3Fz4RqNfd7KxUto17vvs170187 rogid:ACk/tgpcJ++npX546oPs6gaUTw8170187 intact-crc:50D6FCDEB5C64B96|rigid:AOTk/r5Dg8zj0/LTeuWjjR80QYE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URP5 uniprotkb:Q97QD4 intact:EBI-6473683|ensemblbacteria:AAK75951 intact:EBI-6473679|ensemblbacteria:AAK75389 psi-mi:a0a0h2urp5_strpn(display_long)|uniprotkb:SP_1879(locus name) psi-mi:rsmg_strpn(display_long)|uniprotkb:16S rRNA 7-methylguanosine methyltransferase(gene name synonym)|uniprotkb:SP_1285(locus name)|uniprotkb:rsmG(gene name)|psi-mi:rsmG(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473697|imex:IM-18537-125 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0016787"(hydrolase activity)|go:"GO:0046872"(metal ion binding)|ensemblbacteria:AAK75951(transcript)|ensemblbacteria:SP_1879(gene)|refseq:WP_001118962.1|rcsb pdb:3CK2|interpro:IPR000979(Protein of unknown function UPF0025)|interpro:IPR024654|interpro:IPR029052|uniprotkb:Q97NX4(uniprot-removed-ac)|interpro:IPR041802 ensemblbacteria:AAK75389(transcript)|ensemblbacteria:SP_1285(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0070043"("rRNA (guanine-N7-)-methyltransferase activity")|refseq:WP_000802934.1|interpro:IPR003682(Glucose inhibited division protein)|interpro:IPR029063 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:8d0op6UpTdT6DUGHjOVPlcaWywU170187 rogid:mMKDh3fmhRtWLy0Z21hy0dbwPwo170187 intact-crc:C1EB86F5660E3456|rigid:xHCkEuEWSIlXp7B8y1qEpwxvwek false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QD4 uniprotkb:A0A0H2URP5 intact:EBI-6473679|ensemblbacteria:AAK75389 intact:EBI-6473683|ensemblbacteria:AAK75951 psi-mi:rsmg_strpn(display_long)|uniprotkb:16S rRNA 7-methylguanosine methyltransferase(gene name synonym)|uniprotkb:SP_1285(locus name)|uniprotkb:rsmG(gene name)|psi-mi:rsmG(display_short) psi-mi:a0a0h2urp5_strpn(display_long)|uniprotkb:SP_1879(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473686|imex:IM-18537-124 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75389(transcript)|ensemblbacteria:SP_1285(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0070043"("rRNA (guanine-N7-)-methyltransferase activity")|refseq:WP_000802934.1|interpro:IPR003682(Glucose inhibited division protein)|interpro:IPR029063 go:"GO:0016787"(hydrolase activity)|go:"GO:0046872"(metal ion binding)|ensemblbacteria:AAK75951(transcript)|ensemblbacteria:SP_1879(gene)|refseq:WP_001118962.1|rcsb pdb:3CK2|interpro:IPR000979(Protein of unknown function UPF0025)|interpro:IPR024654|interpro:IPR029052|uniprotkb:Q97NX4(uniprot-removed-ac)|interpro:IPR041802 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:mMKDh3fmhRtWLy0Z21hy0dbwPwo170187 rogid:8d0op6UpTdT6DUGHjOVPlcaWywU170187 intact-crc:7C19624E22B1AF22|rigid:xHCkEuEWSIlXp7B8y1qEpwxvwek false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97P97 uniprotkb:Q97NX8 intact:EBI-6473708|ensemblbacteria:AAK75820 intact:EBI-6473712|ensemblbacteria:AAK75945 psi-mi:iojap_strpn(display_long)|uniprotkb:SP_1744(locus name)|uniprotkb:rsfS(gene name)|psi-mi:rsfS(display_short) psi-mi:yidd_strpn(display_long)|uniprotkb:SP_1873(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473715|imex:IM-18537-126 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75820(transcript)|ensemblbacteria:SP_1744(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0090071"(negative regulation of ribosome biogenesis)|refseq:WP_001003023.1|interpro:IPR004394(Iojap-related protein)|interpro:IPR043519 ensemblbacteria:AAK75945(transcript)|ensemblbacteria:SP_1873(gene)|go:"GO:0005886"(plasma membrane)|refseq:WP_000821641.1|interpro:IPR002696(Protein of unknown function DUF37) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:nvn5PiNAM5aLz88d3X/7X7QIeKE170187 rogid:1TnKyhCJ7rXiBfb02M1GtgkKEb0170187 intact-crc:98D8B004B84E7B1A|rigid:UugJv05UOrw/ghIy6Xd3BfZZRNs false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97P97 uniprotkb:Q97NX8 intact:EBI-6473708|ensemblbacteria:AAK75820 intact:EBI-6473712|ensemblbacteria:AAK75945 psi-mi:iojap_strpn(display_long)|uniprotkb:SP_1744(locus name)|uniprotkb:rsfS(gene name)|psi-mi:rsfS(display_short) psi-mi:yidd_strpn(display_long)|uniprotkb:SP_1873(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473726|imex:IM-18537-127 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75820(transcript)|ensemblbacteria:SP_1744(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0090071"(negative regulation of ribosome biogenesis)|refseq:WP_001003023.1|interpro:IPR004394(Iojap-related protein)|interpro:IPR043519 ensemblbacteria:AAK75945(transcript)|ensemblbacteria:SP_1873(gene)|go:"GO:0005886"(plasma membrane)|refseq:WP_000821641.1|interpro:IPR002696(Protein of unknown function DUF37) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:nvn5PiNAM5aLz88d3X/7X7QIeKE170187 rogid:1TnKyhCJ7rXiBfb02M1GtgkKEb0170187 intact-crc:252A54BFFCF1E06E|rigid:UugJv05UOrw/ghIy6Xd3BfZZRNs false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URL1 uniprotkb:Q97RU8 intact:EBI-6473748|ensemblbacteria:AAK75858 intact:EBI-6473754|ensemblbacteria:AAK74833 psi-mi:a0a0h2url1_strpn(display_long)|uniprotkb:SP_1785(locus name) psi-mi:murd_strpn(display_long)|uniprotkb:D-glutamic acid-adding enzyme(gene name synonym)|uniprotkb:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase(gene name synonym)|uniprotkb:SP_0688(locus name)|uniprotkb:murD(gene name)|psi-mi:murD(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473751|imex:IM-18537-129 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75858(transcript)|ensemblbacteria:SP_1785(gene)|refseq:WP_000257087.1|interpro:IPR021380|uniprotkb:Q97P59(uniprot-removed-ac) ensemblbacteria:AAK74833(transcript)|ensemblbacteria:SP_0688(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0008764"(UDP-N-acetylmuramoylalanine-D-glutamate ligase activity)|go:"GO:0009252"(peptidoglycan biosynthetic process)|go:"GO:0051301"(cell division)|go:"GO:0071555"(cell wall organization)|refseq:WP_000863037.1|interpro:IPR004101(Mur ligase, C-terminal)|interpro:IPR005762(UDP-N-acetylmuramoylalanine-D-glutamate ligase)|interpro:IPR013221(Mur ligase, central)|interpro:IPR036565|interpro:IPR036615 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:JCOdlMnl32+IzxxDVK27LX0Z71k170187 rogid:vi3Sf3CA4OpJIVNb0FhExXVNZSk170187 intact-crc:24C4456D7289500A|rigid:c6b4UQVpNvzwgzlW1ufKDgssO8w false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97RU8 uniprotkb:A0A0H2URL1 intact:EBI-6473754|ensemblbacteria:AAK74833 intact:EBI-6473748|ensemblbacteria:AAK75858 psi-mi:murd_strpn(display_long)|uniprotkb:D-glutamic acid-adding enzyme(gene name synonym)|uniprotkb:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase(gene name synonym)|uniprotkb:SP_0688(locus name)|uniprotkb:murD(gene name)|psi-mi:murD(display_short) psi-mi:a0a0h2url1_strpn(display_long)|uniprotkb:SP_1785(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473766|imex:IM-18537-130 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74833(transcript)|ensemblbacteria:SP_0688(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0008764"(UDP-N-acetylmuramoylalanine-D-glutamate ligase activity)|go:"GO:0009252"(peptidoglycan biosynthetic process)|go:"GO:0051301"(cell division)|go:"GO:0071555"(cell wall organization)|refseq:WP_000863037.1|interpro:IPR004101(Mur ligase, C-terminal)|interpro:IPR005762(UDP-N-acetylmuramoylalanine-D-glutamate ligase)|interpro:IPR013221(Mur ligase, central)|interpro:IPR036565|interpro:IPR036615 ensemblbacteria:AAK75858(transcript)|ensemblbacteria:SP_1785(gene)|refseq:WP_000257087.1|interpro:IPR021380|uniprotkb:Q97P59(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:vi3Sf3CA4OpJIVNb0FhExXVNZSk170187 rogid:JCOdlMnl32+IzxxDVK27LX0Z71k170187 intact-crc:9936A1D63636CB7E|rigid:c6b4UQVpNvzwgzlW1ufKDgssO8w false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF0 uniprotkb:Q97NE3 intact:EBI-6472153|ensemblbacteria:AAK75923 intact:EBI-6472146|ensemblbacteria:AAK76159 psi-mi:a0a0h2urf0_strpn(display_long)|uniprotkb:SP_1851(locus name) psi-mi:syy_strpn(display_long)|uniprotkb:Tyrosyl-tRNA synthetase(gene name synonym)|uniprotkb:SP_2100(locus name)|uniprotkb:tyrS(gene name)|psi-mi:tyrS(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473737|imex:IM-18537-128 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75923(transcript)|ensemblbacteria:SP_1851(gene)|go:"GO:0047617"(acyl-CoA hydrolase activity)|rcsb pdb:4I82|interpro:IPR003736(Phenylacetic acid degradation-related protein)|interpro:IPR006683(Thioesterase superfamily)|interpro:IPR029069|uniprotkb:Q97NZ8(uniprot-removed-ac)|refseq:WP_000651213.1|interpro:IPR039298 ensemblbacteria:AAK76159(transcript)|ensemblbacteria:SP_2100(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0004831"(tyrosine-tRNA ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006437"(tyrosyl-tRNA aminoacylation)|refseq:WP_000546887.1|interpro:IPR001412(Aminoacyl-tRNA synthetase, class I, conserved site)|interpro:IPR002305(Aminoacyl-tRNA synthetase, class Ib)|interpro:IPR002307(Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial)|interpro:IPR002942(RNA-binding S4)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold)|interpro:IPR024088|interpro:IPR024107|interpro:IPR036986 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Nm8s+TWvLS7fI50ADYOCEUZktYk170187 rogid:WNM9U67JY/53kDeCA4jxCjBn3LA170187 intact-crc:5F81466C01768227|rigid:nasMw0ZXykNr9Xbb+toZOR9QPAY false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QJ3 uniprotkb:A0A0H2URH9 intact:EBI-6473797|ensemblbacteria:AAK75319 intact:EBI-6473801|ensemblbacteria:AAK75824 psi-mi:trub_strpn(display_long)|uniprotkb:"tRNA pseudouridine(55) synthase"(gene name synonym)|uniprotkb:tRNA pseudouridylate synthase(gene name synonym)|uniprotkb:tRNA-uridine isomerase(gene name synonym)|uniprotkb:SP_1212(locus name)|uniprotkb:truB(gene name)|psi-mi:truB(display_short) psi-mi:a0a0h2urh9_strpn(display_long)|uniprotkb:SP_1748(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473794|imex:IM-18537-132 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75319(transcript)|ensemblbacteria:SP_1212(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0031119"(tRNA pseudouridine synthesis)|go:"GO:0106029"(tRNA pseudouridine synthase activity)|interpro:IPR032819|refseq:WP_001013240.1|interpro:IPR002501(tRNA pseudouridine synthase B, N-terminal)|interpro:IPR014780(tRNA pseudouridine synthase B, N-terminal, bacterial-type)|interpro:IPR020103 ensemblbacteria:AAK75824(transcript)|ensemblbacteria:SP_1748(gene)|go:"GO:0003723"(RNA binding)|refseq:WP_000060169.1|interpro:IPR001890(CRS1/YhbY)|interpro:IPR017924|uniprotkb:Q97P93(uniprot-removed-ac)|interpro:IPR035920 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:7pbnreR3keh87Hs0bLrn5c8zxTk170187 rogid:soOpoMdxlj9387HXgL6IBFsn0bM170187 intact-crc:01C7AF5EAE16B617|rigid:VSaeX5fVjBX2affaWAENsbhuZ1s false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URA2 uniprotkb:A0A0H2UQ73 intact:EBI-6473783|ensemblbacteria:AAK75854 intact:EBI-6473780|ensemblbacteria:AAK75339 psi-mi:a0a0h2ura2_strpn(display_long)|uniprotkb:SP_1781(locus name) psi-mi:a0a0h2uq73_strpn(display_long)|uniprotkb:SP_1233(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473777|imex:IM-18537-131 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75854(transcript)|ensemblbacteria:SP_1781(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_001188203.1|interpro:IPR006700(Protein of unknown function DUF558, methyltransferase predicted)|interpro:IPR015947(PUA-like)|interpro:IPR029026|interpro:IPR029028|uniprotkb:Q97P63(uniprot-removed-ac) ensemblbacteria:AAK75339(transcript)|ensemblbacteria:SP_1233(gene)|go:"GO:0016021"(integral component of membrane)|uniprotkb:Q97QH8(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dsbMXPQZmVzDWnvYKVsO6KkRytI170187 rogid:w9YU+/5H0y2hdjpYkOMHduE+YGs170187 intact-crc:948A9DD920E2D645|rigid:eefv1K0Xa7u5hFdrwS5yhZ0IOmE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URH9 uniprotkb:Q97QJ3 intact:EBI-6473801|ensemblbacteria:AAK75824 intact:EBI-6473797|ensemblbacteria:AAK75319 psi-mi:a0a0h2urh9_strpn(display_long)|uniprotkb:SP_1748(locus name) psi-mi:trub_strpn(display_long)|uniprotkb:"tRNA pseudouridine(55) synthase"(gene name synonym)|uniprotkb:tRNA pseudouridylate synthase(gene name synonym)|uniprotkb:tRNA-uridine isomerase(gene name synonym)|uniprotkb:SP_1212(locus name)|uniprotkb:truB(gene name)|psi-mi:truB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473812|imex:IM-18537-133 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75824(transcript)|ensemblbacteria:SP_1748(gene)|go:"GO:0003723"(RNA binding)|refseq:WP_000060169.1|interpro:IPR001890(CRS1/YhbY)|interpro:IPR017924|uniprotkb:Q97P93(uniprot-removed-ac)|interpro:IPR035920 ensemblbacteria:AAK75319(transcript)|ensemblbacteria:SP_1212(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0031119"(tRNA pseudouridine synthesis)|go:"GO:0106029"(tRNA pseudouridine synthase activity)|interpro:IPR032819|refseq:WP_001013240.1|interpro:IPR002501(tRNA pseudouridine synthase B, N-terminal)|interpro:IPR014780(tRNA pseudouridine synthase B, N-terminal, bacterial-type)|interpro:IPR020103 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:soOpoMdxlj9387HXgL6IBFsn0bM170187 rogid:7pbnreR3keh87Hs0bLrn5c8zxTk170187 intact-crc:BC354BE5EAA92D63|rigid:VSaeX5fVjBX2affaWAENsbhuZ1s false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF8 uniprotkb:A0A0H2US62 intact:EBI-6473400|ensemblbacteria:AAK75822 intact:EBI-6473406|ensemblbacteria:AAK76186 psi-mi:a0a0h2urf8_strpn(display_long)|uniprotkb:SP_1746(locus name) psi-mi:a0a0h2us62_strpn(display_long)|uniprotkb:SP_2128(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473834|imex:IM-18537-135 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75822(transcript)|ensemblbacteria:SP_1746(gene)|refseq:WP_000121667.1|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR005249(Conserved hypothetical protein CHP00488)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|uniprotkb:Q97P95(uniprot-removed-ac) ensemblbacteria:AAK76186(transcript)|ensemblbacteria:SP_2128(gene)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR029061|uniprotkb:Q97NC3(uniprot-removed-ac)|refseq:WP_000603787.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:RiHnV4CEOcEnMlA9V7Oiu3gcSlM170187 rogid:c4nqm9YUoYAjYwiZ58V+1l+CNz0170187 intact-crc:EBC35747FDBEF591|rigid:/yrlewvuMWp1EGlyyKbDZjOfMys false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URF8 uniprotkb:A0A0H2US62 intact:EBI-6473400|ensemblbacteria:AAK75822 intact:EBI-6473406|ensemblbacteria:AAK76186 psi-mi:a0a0h2urf8_strpn(display_long)|uniprotkb:SP_1746(locus name) psi-mi:a0a0h2us62_strpn(display_long)|uniprotkb:SP_2128(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473823|imex:IM-18537-134 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75822(transcript)|ensemblbacteria:SP_1746(gene)|refseq:WP_000121667.1|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR005249(Conserved hypothetical protein CHP00488)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|uniprotkb:Q97P95(uniprot-removed-ac) ensemblbacteria:AAK76186(transcript)|ensemblbacteria:SP_2128(gene)|interpro:IPR005474(Transketolase, N-terminal)|interpro:IPR029061|uniprotkb:Q97NC3(uniprot-removed-ac)|refseq:WP_000603787.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:RiHnV4CEOcEnMlA9V7Oiu3gcSlM170187 rogid:c4nqm9YUoYAjYwiZ58V+1l+CNz0170187 intact-crc:5631B3FCB9016EE5|rigid:/yrlewvuMWp1EGlyyKbDZjOfMys false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97P97 uniprotkb:Q97NX8 intact:EBI-6473708|ensemblbacteria:AAK75820 intact:EBI-6473712|ensemblbacteria:AAK75945 psi-mi:iojap_strpn(display_long)|uniprotkb:SP_1744(locus name)|uniprotkb:rsfS(gene name)|psi-mi:rsfS(display_short) psi-mi:yidd_strpn(display_long)|uniprotkb:SP_1873(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473845|imex:IM-18537-136 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75820(transcript)|ensemblbacteria:SP_1744(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0090071"(negative regulation of ribosome biogenesis)|refseq:WP_001003023.1|interpro:IPR004394(Iojap-related protein)|interpro:IPR043519 ensemblbacteria:AAK75945(transcript)|ensemblbacteria:SP_1873(gene)|go:"GO:0005886"(plasma membrane)|refseq:WP_000821641.1|interpro:IPR002696(Protein of unknown function DUF37) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:nvn5PiNAM5aLz88d3X/7X7QIeKE170187 rogid:1TnKyhCJ7rXiBfb02M1GtgkKEb0170187 intact-crc:CDB0D077BE9FC0CC|rigid:UugJv05UOrw/ghIy6Xd3BfZZRNs false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NX8 uniprotkb:Q97P97 intact:EBI-6473712|ensemblbacteria:AAK75945 intact:EBI-6473708|ensemblbacteria:AAK75820 psi-mi:yidd_strpn(display_long)|uniprotkb:SP_1873(locus name) psi-mi:iojap_strpn(display_long)|uniprotkb:SP_1744(locus name)|uniprotkb:rsfS(gene name)|psi-mi:rsfS(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473856|imex:IM-18537-137 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75945(transcript)|ensemblbacteria:SP_1873(gene)|go:"GO:0005886"(plasma membrane)|refseq:WP_000821641.1|interpro:IPR002696(Protein of unknown function DUF37) ensemblbacteria:AAK75820(transcript)|ensemblbacteria:SP_1744(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0017148"(negative regulation of translation)|go:"GO:0042256"(mature ribosome assembly)|go:"GO:0090071"(negative regulation of ribosome biogenesis)|refseq:WP_001003023.1|interpro:IPR004394(Iojap-related protein)|interpro:IPR043519 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:1TnKyhCJ7rXiBfb02M1GtgkKEb0170187 rogid:nvn5PiNAM5aLz88d3X/7X7QIeKE170187 intact-crc:704234CCFA205BB8|rigid:UugJv05UOrw/ghIy6Xd3BfZZRNs false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNS0 uniprotkb:A0A0H2UR75 intact:EBI-6473870|ensemblbacteria:AAK74679 intact:EBI-6473867|ensemblbacteria:AAK75819 psi-mi:a0a0h2uns0_strpn(display_long)|uniprotkb:SP_0521(locus name) psi-mi:a0a0h2ur75_strpn(display_long)|uniprotkb:SP_1743(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473873|imex:IM-18537-138 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74679(transcript)|ensemblbacteria:SP_0521(gene)|go:"GO:0003824"(catalytic activity)|refseq:WP_001278301.1|interpro:IPR001310("Histidine triad (HIT) protein")|interpro:IPR011146(Histidine triad-like motif)|interpro:IPR019808|uniprotkb:Q97S70(uniprot-removed-ac)|interpro:IPR036265|interpro:IPR039384 ensemblbacteria:AAK75819(transcript)|ensemblbacteria:SP_1743(gene)|interpro:IPR029063|refseq:WP_000605157.1|uniprotkb:Q97P98(uniprot-removed-ac)|interpro:IPR041698 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:YDIIjTnLS8nLl663GOah99DlVxY170187 rogid:Y8/Y1K6jJyj+92EsPe7it7EBrks170187 intact-crc:E21A111805908D7B|rigid:pwhmffW39Y4SAFtjdp3nDmcKCQU false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QD1 uniprotkb:A0A0H2URH3 intact:EBI-6473467|ensemblbacteria:AAK75392 intact:EBI-6473902|ensemblbacteria:AAK75816 psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:a0a0h2urh3_strpn(display_long)|uniprotkb:SP_1740(locus name)|uniprotkb:Toxin YoeB(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473916|imex:IM-18537-141 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 ensemblbacteria:AAK75816(transcript)|ensemblbacteria:SP_1740(gene)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006401"(RNA catabolic process)|refseq:WP_000924721.1|interpro:IPR009614(Addiction module toxin, Txe/YoeB)|uniprotkb:Q97PA1(uniprot-removed-ac)|interpro:IPR035093 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 rogid:tREOKjWTP2c3ZTQxzxJKuNp17co170187 intact-crc:60A951C3874E27D4|rigid:XWXLQwvWtnAmjdJsD7OzNGec60o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URH3 uniprotkb:Q97QD1 intact:EBI-6473902|ensemblbacteria:AAK75816 intact:EBI-6473467|ensemblbacteria:AAK75392 psi-mi:a0a0h2urh3_strpn(display_long)|uniprotkb:SP_1740(locus name)|uniprotkb:Toxin YoeB(gene name synonym) psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473905|imex:IM-18537-140 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75816(transcript)|ensemblbacteria:SP_1740(gene)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006401"(RNA catabolic process)|refseq:WP_000924721.1|interpro:IPR009614(Addiction module toxin, Txe/YoeB)|uniprotkb:Q97PA1(uniprot-removed-ac)|interpro:IPR035093 ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tREOKjWTP2c3ZTQxzxJKuNp17co170187 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 intact-crc:DD5BB578C3F1BCA0|rigid:XWXLQwvWtnAmjdJsD7OzNGec60o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97P99 uniprotkb:Q97R91 intact:EBI-6473888|ensemblbacteria:AAK75818 intact:EBI-6473884|ensemblbacteria:AAK75059 psi-mi:tmcal_strpn(display_long)|uniprotkb:tmcAL(gene name)|psi-mi:tmcAL(display_short)|uniprotkb:SP_1742(locus name) psi-mi:kthy_strpn(display_long)|uniprotkb:dTMP kinase(gene name synonym)|uniprotkb:SP_0935(locus name)|uniprotkb:tmk(gene name)|psi-mi:tmk(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473891|imex:IM-18537-139 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75818(transcript)|ensemblbacteria:SP_1742(gene)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0006400"(tRNA modification)|go:"GO:0016879"(ligase activity, forming carbon-nitrogen bonds)|go:"GO:0005737"(cytoplasm)|refseq:WP_000156358.1|interpro:IPR008513(Protein of unknown function DUF795)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold) ensemblbacteria:AAK75059(transcript)|ensemblbacteria:SP_0935(gene)|go:"GO:0004798"(thymidylate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006233"(dTDP biosynthetic process)|go:"GO:0006235"(dTTP biosynthetic process)|refseq:WP_000033362.1|interpro:IPR018094|interpro:IPR018095|interpro:IPR027417|interpro:IPR039430 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:JY4051MmP3MV/mHVxnZNXbfK8ks170187 rogid:5u8roH9pLRRt4rac1+LJhSUvKAQ170187 intact-crc:C415DD069CDFC9E5|rigid:qYRzV0istsN6lGl6xudg8tUt/i0 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR62 uniprotkb:A0A0H2UPE1 intact:EBI-6473927|ensemblbacteria:AAK75798 intact:EBI-6473934|ensemblbacteria:AAK74954 psi-mi:a0a0h2ur62_strpn(display_long)|uniprotkb:SP_1721(locus name)|uniprotkb:scrK(gene name)|psi-mi:scrK(display_short) psi-mi:a0a0h2upe1_strpn(display_long)|uniprotkb:SP_0822(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473945|imex:IM-18537-143 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75798(transcript)|ensemblbacteria:SP_1721(gene)|go:"GO:0008865"(fructokinase activity)|refseq:WP_000164302.1|interpro:IPR000600(ROK)|uniprotkb:Q97PB9(uniprot-removed-ac)|interpro:IPR043129 ensemblbacteria:AAK74954(transcript)|ensemblbacteria:SP_0822(gene)|refseq:WP_000443573.1|interpro:IPR014904(Protein of unknown function DUF1797)|uniprotkb:Q97RJ2(uniprot-removed-ac)|interpro:IPR038073 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dUhdHqgUECEFwMSowh8Gk082pEk170187 rogid:YH/4VcfuzjKIY961RYTbMEKvcyQ170187 intact-crc:A44558AC581D2D4D|rigid:Xba0uEfpqDcpNMVxACvORXudyu4 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR62 uniprotkb:A0A0H2UPE1 intact:EBI-6473927|ensemblbacteria:AAK75798 intact:EBI-6473934|ensemblbacteria:AAK74954 psi-mi:a0a0h2ur62_strpn(display_long)|uniprotkb:SP_1721(locus name)|uniprotkb:scrK(gene name)|psi-mi:scrK(display_short) psi-mi:a0a0h2upe1_strpn(display_long)|uniprotkb:SP_0822(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473931|imex:IM-18537-142 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75798(transcript)|ensemblbacteria:SP_1721(gene)|go:"GO:0008865"(fructokinase activity)|refseq:WP_000164302.1|interpro:IPR000600(ROK)|uniprotkb:Q97PB9(uniprot-removed-ac)|interpro:IPR043129 ensemblbacteria:AAK74954(transcript)|ensemblbacteria:SP_0822(gene)|refseq:WP_000443573.1|interpro:IPR014904(Protein of unknown function DUF1797)|uniprotkb:Q97RJ2(uniprot-removed-ac)|interpro:IPR038073 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dUhdHqgUECEFwMSowh8Gk082pEk170187 rogid:YH/4VcfuzjKIY961RYTbMEKvcyQ170187 intact-crc:19B7BC171CA2B639|rigid:Xba0uEfpqDcpNMVxACvORXudyu4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR23 uniprotkb:A0A0H2UPY2 intact:EBI-6473959|ensemblbacteria:AAK75747 intact:EBI-6473962|ensemblbacteria:AAK75222 psi-mi:a0a0h2ur23_strpn(display_long)|uniprotkb:SP_1668(locus name) psi-mi:a0a0h2upy2_strpn(display_long)|uniprotkb:SP_1111(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473956|imex:IM-18537-144 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75747(transcript)|ensemblbacteria:SP_1668(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001055246.1|interpro:IPR011737(Conserved hypothetical protein CHP02206, TP0381)|uniprotkb:Q97PF8(uniprot-removed-ac) ensemblbacteria:AAK75222(transcript)|ensemblbacteria:SP_1111(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000592059.1|interpro:IPR003740(Protein of unknown function DUF161)|interpro:IPR019264|uniprotkb:Q97QT8(uniprot-removed-ac)|interpro:IPR015867(Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zTEyN1J45xLB/ApJs6RKzykYNic170187 rogid:jF1x0x1Cq1Jk3vzjPPadx2MgntQ170187 intact-crc:739E2E5899A0AD17|rigid:gsKcroTWr0QIt00uuSk4iImZLfI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQX6 uniprotkb:A0A0H2UP05 intact:EBI-6473976|ensemblbacteria:AAK75692 intact:EBI-6473979|ensemblbacteria:AAK74778 psi-mi:a0a0h2uqx6_strpn(display_long)|uniprotkb:SP_1608(locus name) psi-mi:a0a0h2up05_strpn(display_long)|uniprotkb:SP_0627(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473973|imex:IM-18537-145 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75692(transcript)|ensemblbacteria:SP_1608(gene)|go:"GO:0016491"(oxidoreductase activity)|refseq:WP_000754663.1|interpro:IPR006076(FAD dependent oxidoreductase)|uniprotkb:Q97PK1(uniprot-removed-ac)|interpro:IPR036188 ensemblbacteria:AAK74778(transcript)|ensemblbacteria:SP_0627(gene)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_001077206.1|interpro:IPR008007(Peptidase M42)|uniprotkb:Q97RZ9(uniprot-removed-ac)|interpro:IPR023367 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:eyd9MsThund0o/qqXJNa8jEs9Ss170187 rogid:YLqT3T/9ApUVJ0Xu0zwAqgiEigI170187 intact-crc:D61A68B1DEBD009B|rigid:s+r2NTwzutN43peUT15sTM//0DM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQX6 uniprotkb:A0A0H2UP05 intact:EBI-6473976|ensemblbacteria:AAK75692 intact:EBI-6473979|ensemblbacteria:AAK74778 psi-mi:a0a0h2uqx6_strpn(display_long)|uniprotkb:SP_1608(locus name) psi-mi:a0a0h2up05_strpn(display_long)|uniprotkb:SP_0627(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6473990|imex:IM-18537-146 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75692(transcript)|ensemblbacteria:SP_1608(gene)|go:"GO:0016491"(oxidoreductase activity)|refseq:WP_000754663.1|interpro:IPR006076(FAD dependent oxidoreductase)|uniprotkb:Q97PK1(uniprot-removed-ac)|interpro:IPR036188 ensemblbacteria:AAK74778(transcript)|ensemblbacteria:SP_0627(gene)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_001077206.1|interpro:IPR008007(Peptidase M42)|uniprotkb:Q97RZ9(uniprot-removed-ac)|interpro:IPR023367 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:eyd9MsThund0o/qqXJNa8jEs9Ss170187 rogid:YLqT3T/9ApUVJ0Xu0zwAqgiEigI170187 intact-crc:6BE88C0A9A029BEF|rigid:s+r2NTwzutN43peUT15sTM//0DM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNS2 uniprotkb:Q97PM1 intact:EBI-6474029|ensemblbacteria:AAK74604 intact:EBI-6474032|ensemblbacteria:AAK75670 psi-mi:a0a0h2uns2_strpn(display_long)|uniprotkb:SP_0443(locus name) psi-mi:cody_strpn(display_long)|uniprotkb:SP_1584(locus name)|uniprotkb:codY(gene name)|psi-mi:codY(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474036|imex:IM-18537-149 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74604(transcript)|ensemblbacteria:SP_0443(gene)|go:"GO:0004371"(glycerone kinase activity)|go:"GO:0006071"(glycerol metabolic process)|refseq:WP_000036661.1|interpro:IPR004007(Dak phosphatase)|interpro:IPR019986|interpro:IPR033470|uniprotkb:Q97SE1(uniprot-removed-ac)|interpro:IPR036117 ensemblbacteria:AAK75670(transcript)|ensemblbacteria:SP_1584(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR029016|refseq:WP_000940729.1|interpro:IPR010312(GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal)|interpro:IPR011991(Winged helix repressor DNA-binding)|interpro:IPR013198(GTP-sensing helix-turn-helix, CodY, C-terminal)|interpro:IPR014154(GTP-sensing transcriptional pleiotropic repressor CodY)|interpro:IPR036388|interpro:IPR036390 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:l5HgfEYEsiYVBfQz+GfLHdN5GCQ170187 rogid:Dpg3bSduHDJ+6SMMaJbKV0J4yow170187 intact-crc:6A44D8D6EEF97690|rigid:CAVaSJRMnUzK8nneJKmUS4UjsxE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQQ5 uniprotkb:A0A0H2UQV8 intact:EBI-6474018|ensemblbacteria:AAK75572 intact:EBI-6474012|ensemblbacteria:AAK75675 psi-mi:a0a0h2uqq5_strpn(display_long)|uniprotkb:SP_1478(locus name) psi-mi:a0a0h2uqv8_strpn(display_long)|uniprotkb:murT(gene name)|psi-mi:murT(display_short)|uniprotkb:SP_1589(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474015|imex:IM-18537-148 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75572(transcript)|ensemblbacteria:SP_1478(gene)|go:"GO:0047834"(D-threo-aldose 1-dehydrogenase activity)|refseq:WP_001099678.1|interpro:IPR018170|interpro:IPR020471|interpro:IPR023210|uniprotkb:Q97PW2(uniprot-removed-ac)|interpro:IPR036812 ensemblbacteria:AAK75675(transcript)|ensemblbacteria:SP_1589(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009252"(peptidoglycan biosynthetic process)|go:"GO:0071555"(cell wall organization)|go:"GO:0140282"(carbon-nitrogen ligase activity on lipid II)|interpro:IPR043703|refseq:WP_001050241.1|interpro:IPR013221(Mur ligase, central)|interpro:IPR013564(Region of unknown function DUF1727)|uniprotkb:Q97PL7(uniprot-removed-ac)|interpro:IPR036565 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:f6qgDDTDZeXszNXV4GrqOBRUeq0170187 rogid:ABQkzA9xvLJv2BKqH6pd1ObZc0Q170187 intact-crc:D1183483CC569DCA|rigid:+kWiFMf/cU6+Ozojbw7cK3ZGH3o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P63895 uniprotkb:A0A0H2UR43 intact:EBI-6472817|ensemblbacteria:AAK75642|uniprotkb:Q97PP8 intact:EBI-6472822|ensemblbacteria:AAK75681 psi-mi:dapb_strpn(display_long)|uniprotkb:SP_1555(locus name)|uniprotkb:dapB(gene name)|psi-mi:dapB(display_short) psi-mi:a0a0h2ur43_strpn(display_long)|uniprotkb:SP_1597(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474001|imex:IM-18537-147 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75642(transcript)|ensemblbacteria:SP_1555(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0008839"(4-hydroxy-tetrahydrodipicolinate reductase)|go:"GO:0009089"(lysine biosynthetic process via diaminopimelate)|go:"GO:0016726"(oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor)|go:"GO:0019877"(diaminopimelate biosynthetic process)|go:"GO:0050661"(NADP binding)|go:"GO:0051287"(NAD binding)|refseq:WP_000027902.1|interpro:IPR000846(Dihydrodipicolinate reductase)|interpro:IPR022663|interpro:IPR022664|interpro:IPR023940|interpro:IPR036291 ensemblbacteria:AAK75681(transcript)|ensemblbacteria:SP_1597(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009825(Protein of unknown function DUF1393)|uniprotkb:Q97PL2(uniprot-removed-ac)|refseq:WP_000814978.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:wm2DwSncIn/5KgLYNFymGHiOIVE170187 rogid:KdjbhnhJnJOWNnnpkqeEFvk2Fos170187 intact-crc:32FB4B3FECEB6031|rigid:Yvx80d7z+fV5FtD248Z2RgFzpME false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PM9 uniprotkb:A0A0H2UN55 intact:EBI-6474064|ensemblbacteria:AAK75662 intact:EBI-6474058|ensemblbacteria:AAK74287 psi-mi:metaa_strpn(display_long)|uniprotkb:metAA(gene name)|psi-mi:metAA(display_short)|uniprotkb:Homoserine transacetylase(gene name synonym)|uniprotkb:metA(gene name synonym)|uniprotkb:SP_1576(locus name) psi-mi:a0a0h2un55_strpn(display_long)|uniprotkb:SP_0100(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474061|imex:IM-18537-151 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR033752|ensemblbacteria:AAK75662(transcript)|ensemblbacteria:SP_1576(gene)|go:"GO:0004414"(homoserine O-acetyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008899"(homoserine O-succinyltransferase activity)|go:"GO:0019281"(L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine)|refseq:WP_001122709.1|interpro:IPR005697(Homoserine O-succinyltransferase)|interpro:IPR029062 ensemblbacteria:AAK74287(transcript)|ensemblbacteria:SP_0100(gene)|refseq:WP_000273863.1|interpro:IPR005149(Transcriptional regulator PadR-like)|uniprotkb:Q97T55(uniprot-removed-ac)|interpro:IPR036388|interpro:IPR036390 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jIgw270py70Q6sttBrj9R2w4WeY170187 rogid:f3Drf+KFtMrt5cQTplCbMbJNVtQ170187 intact-crc:B584F9C08FB805E1|rigid:2SyxyfPVgbKh51Ik9yfLLuLOfqw false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PM1 uniprotkb:A0A0H2UNS2 intact:EBI-6474032|ensemblbacteria:AAK75670 intact:EBI-6474029|ensemblbacteria:AAK74604 psi-mi:cody_strpn(display_long)|uniprotkb:SP_1584(locus name)|uniprotkb:codY(gene name)|psi-mi:codY(display_short) psi-mi:a0a0h2uns2_strpn(display_long)|uniprotkb:SP_0443(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474047|imex:IM-18537-150 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75670(transcript)|ensemblbacteria:SP_1584(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR029016|refseq:WP_000940729.1|interpro:IPR010312(GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal)|interpro:IPR011991(Winged helix repressor DNA-binding)|interpro:IPR013198(GTP-sensing helix-turn-helix, CodY, C-terminal)|interpro:IPR014154(GTP-sensing transcriptional pleiotropic repressor CodY)|interpro:IPR036388|interpro:IPR036390 ensemblbacteria:AAK74604(transcript)|ensemblbacteria:SP_0443(gene)|go:"GO:0004371"(glycerone kinase activity)|go:"GO:0006071"(glycerol metabolic process)|refseq:WP_000036661.1|interpro:IPR004007(Dak phosphatase)|interpro:IPR019986|interpro:IPR033470|uniprotkb:Q97SE1(uniprot-removed-ac)|interpro:IPR036117 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Dpg3bSduHDJ+6SMMaJbKV0J4yow170187 rogid:l5HgfEYEsiYVBfQz+GfLHdN5GCQ170187 intact-crc:D7B63C6DAA46EDE4|rigid:CAVaSJRMnUzK8nneJKmUS4UjsxE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQU4 uniprotkb:A0A0H2UQY5 intact:EBI-6474090|ensemblbacteria:AAK75648 intact:EBI-6474093|ensemblbacteria:AAK75690 psi-mi:a0a0h2uqu4_strpn(display_long)|uniprotkb:dacA(gene name)|psi-mi:dacA(display_short)|uniprotkb:Cyclic-di-AMP synthase(gene name synonym)|uniprotkb:SP_1561(locus name) psi-mi:a0a0h2uqy5_strpn(display_long)|uniprotkb:SP_1606(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474087|imex:IM-18537-153 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75648(transcript)|ensemblbacteria:SP_1561(gene)|go:"GO:0004016"(adenylate cyclase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006171"(cAMP biosynthetic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0019932"(second-messenger-mediated signaling)|interpro:IPR003390(Protein of unknown function DUF147)|interpro:IPR014046(Conserved hypothetical protein CHP00159)|interpro:IPR034701|uniprotkb:Q97PP2(uniprot-removed-ac)|interpro:IPR036888 ensemblbacteria:AAK75690(transcript)|ensemblbacteria:SP_1606(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97PK3(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:rucpemAg566LmIHIIoAi+X9IYPg170187 rogid:ZyJUQxVlYcGGa9swFFv12z8YzrU170187 intact-crc:CBCB69708DDF2151|rigid:T0Pt2dFJAmfe6JU4Ry9/bOMnUi4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PM9 uniprotkb:A0A0H2UN55 intact:EBI-6474064|ensemblbacteria:AAK75662 intact:EBI-6474058|ensemblbacteria:AAK74287 psi-mi:metaa_strpn(display_long)|uniprotkb:metAA(gene name)|psi-mi:metAA(display_short)|uniprotkb:Homoserine transacetylase(gene name synonym)|uniprotkb:metA(gene name synonym)|uniprotkb:SP_1576(locus name) psi-mi:a0a0h2un55_strpn(display_long)|uniprotkb:SP_0100(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474076|imex:IM-18537-152 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR033752|ensemblbacteria:AAK75662(transcript)|ensemblbacteria:SP_1576(gene)|go:"GO:0004414"(homoserine O-acetyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008899"(homoserine O-succinyltransferase activity)|go:"GO:0019281"(L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine)|refseq:WP_001122709.1|interpro:IPR005697(Homoserine O-succinyltransferase)|interpro:IPR029062 ensemblbacteria:AAK74287(transcript)|ensemblbacteria:SP_0100(gene)|refseq:WP_000273863.1|interpro:IPR005149(Transcriptional regulator PadR-like)|uniprotkb:Q97T55(uniprot-removed-ac)|interpro:IPR036388|interpro:IPR036390 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jIgw270py70Q6sttBrj9R2w4WeY170187 rogid:f3Drf+KFtMrt5cQTplCbMbJNVtQ170187 intact-crc:08761D7BCB079E95|rigid:2SyxyfPVgbKh51Ik9yfLLuLOfqw false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQY5 uniprotkb:A0A0H2UQU4 intact:EBI-6474093|ensemblbacteria:AAK75690 intact:EBI-6474090|ensemblbacteria:AAK75648 psi-mi:a0a0h2uqy5_strpn(display_long)|uniprotkb:SP_1606(locus name) psi-mi:a0a0h2uqu4_strpn(display_long)|uniprotkb:dacA(gene name)|psi-mi:dacA(display_short)|uniprotkb:Cyclic-di-AMP synthase(gene name synonym)|uniprotkb:SP_1561(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474104|imex:IM-18537-154 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75690(transcript)|ensemblbacteria:SP_1606(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97PK3(uniprot-removed-ac) ensemblbacteria:AAK75648(transcript)|ensemblbacteria:SP_1561(gene)|go:"GO:0004016"(adenylate cyclase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0006171"(cAMP biosynthetic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016779"(nucleotidyltransferase activity)|go:"GO:0019932"(second-messenger-mediated signaling)|interpro:IPR003390(Protein of unknown function DUF147)|interpro:IPR014046(Conserved hypothetical protein CHP00159)|interpro:IPR034701|uniprotkb:Q97PP2(uniprot-removed-ac)|interpro:IPR036888 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ZyJUQxVlYcGGa9swFFv12z8YzrU170187 rogid:rucpemAg566LmIHIIoAi+X9IYPg170187 intact-crc:76398DCBC960BA25|rigid:T0Pt2dFJAmfe6JU4Ry9/bOMnUi4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQS7 uniprotkb:A0A0H2UMZ1 intact:EBI-6474115|ensemblbacteria:AAK75624 intact:EBI-6474121|ensemblbacteria:AAK74212 psi-mi:a0a0h2uqs7_strpn(display_long)|uniprotkb:SP_1536(locus name) psi-mi:a0a0h2umz1_strpn(display_long)|uniprotkb:tadA(gene name)|psi-mi:tadA(display_short)|uniprotkb:SP_0020(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474118|imex:IM-18537-155 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75624(transcript)|ensemblbacteria:SP_1536(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000390785.1|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR007848(Methyltransferase small)|interpro:IPR029063|uniprotkb:Q97PR6(uniprot-removed-ac) ensemblbacteria:AAK74212(transcript)|ensemblbacteria:SP_0020(gene)|go:"GO:0002100"(tRNA wobble adenosine to inosine editing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0052717"(tRNA-specific adenosine-34 deaminase activity)|refseq:WP_000291875.1|interpro:IPR002125(CMP/dCMP deaminase, zinc-binding)|interpro:IPR016192(APOBEC/CMP deaminase, zinc-binding)|interpro:IPR016193(Cytidine deaminase-like)|interpro:IPR028883|uniprotkb:Q97TC0(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:b3ePqWM5bURsjFyfFQ7C3fZydCM170187 rogid:EmvdxduBlo+tTYGi9Vu/RUpPBDQ170187 intact-crc:E6A7381210505941|rigid:IUFXnApd0bNm7v1MPW209i12/kk false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PR7 uniprotkb:Q97PW7 intact:EBI-6474132|ensemblbacteria:AAK75623 intact:EBI-6472858|ensemblbacteria:AAK75567 psi-mi:y1535_strpn(display_long)|uniprotkb:SP_1535(locus name) psi-mi:y1473_strpn(display_long)|uniprotkb:SP_1473(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474135|imex:IM-18537-156 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75623(transcript)|ensemblbacteria:SP_1535(gene)|refseq:WP_000349601.1|interpro:IPR000305(Excinuclease ABC, C subunit, N-terminal)|interpro:IPR035901 ensemblbacteria:SP_1473(gene)|go:"GO:0005737"(cytoplasm)|ensemblbacteria:AAK75567(transcript)|refseq:WP_000371287.1|interpro:IPR009242(Protein of unknown function DUF896, bacterial) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zuAS/yGD1TGsd0/tBZkn8oeZ84o170187 rogid:0oMC5zLFHDh7Ibw6aksxKXKCfgs170187 intact-crc:28BAB4BDF67A2964|rigid:tmgd2RdgOO3TaNuI06ZjOSMqTvU false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQZ2 uniprotkb:A0A0H2UN91 intact:EBI-6474149|ensemblbacteria:AAK75596 intact:EBI-6472199|ensemblbacteria:AAK74365 psi-mi:a0a0h2uqz2_strpn(display_long)|uniprotkb:SP_1505(locus name) psi-mi:a0a0h2un91_strpn(display_long)|uniprotkb:SP_0184(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474146|imex:IM-18537-157 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75596(transcript)|ensemblbacteria:SP_1505(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000435455.1|interpro:IPR002549(Protein of unknown function UPF0118)|uniprotkb:Q97PT9(uniprot-removed-ac) ensemblbacteria:AAK74365(transcript)|ensemblbacteria:SP_0184(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009214(Uncharacterised conserved protein UCP033111, membrane associated)|uniprotkb:Q97SX9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:NUFp4oyd+yaz7d3gWRSeTrTlavY170187 rogid:/46BFODW8bgC1dhws3CDEofEPPQ170187 intact-crc:48606F2F25420261|rigid:83Md3rReUE1/ZMu/EdRbZlZ8tJI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQQ5 uniprotkb:A0A0H2UQV8 intact:EBI-6474018|ensemblbacteria:AAK75572 intact:EBI-6474012|ensemblbacteria:AAK75675 psi-mi:a0a0h2uqq5_strpn(display_long)|uniprotkb:SP_1478(locus name) psi-mi:a0a0h2uqv8_strpn(display_long)|uniprotkb:murT(gene name)|psi-mi:murT(display_short)|uniprotkb:SP_1589(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474160|imex:IM-18537-158 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75572(transcript)|ensemblbacteria:SP_1478(gene)|go:"GO:0047834"(D-threo-aldose 1-dehydrogenase activity)|refseq:WP_001099678.1|interpro:IPR018170|interpro:IPR020471|interpro:IPR023210|uniprotkb:Q97PW2(uniprot-removed-ac)|interpro:IPR036812 ensemblbacteria:AAK75675(transcript)|ensemblbacteria:SP_1589(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0009252"(peptidoglycan biosynthetic process)|go:"GO:0071555"(cell wall organization)|go:"GO:0140282"(carbon-nitrogen ligase activity on lipid II)|interpro:IPR043703|refseq:WP_001050241.1|interpro:IPR013221(Mur ligase, central)|interpro:IPR013564(Region of unknown function DUF1727)|uniprotkb:Q97PL7(uniprot-removed-ac)|interpro:IPR036565 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:f6qgDDTDZeXszNXV4GrqOBRUeq0170187 rogid:ABQkzA9xvLJv2BKqH6pd1ObZc0Q170187 intact-crc:847054F0CA87261C|rigid:+kWiFMf/cU6+Ozojbw7cK3ZGH3o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PW7 uniprotkb:P65779 intact:EBI-6472858|ensemblbacteria:AAK75567 intact:EBI-6472853|ensemblbacteria:AAK75210|uniprotkb:Q97QV0 psi-mi:y1473_strpn(display_long)|uniprotkb:SP_1473(locus name) psi-mi:nadk_strpn(display_long)|uniprotkb:nadK(gene name)|psi-mi:nadK(display_short)|uniprotkb:ATP-dependent NAD kinase(gene name synonym)|uniprotkb:SP_1098(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474171|imex:IM-18537-159 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:SP_1473(gene)|go:"GO:0005737"(cytoplasm)|ensemblbacteria:AAK75567(transcript)|refseq:WP_000371287.1|interpro:IPR009242(Protein of unknown function DUF896, bacterial) ensemblbacteria:AAK75210(transcript)|ensemblbacteria:SP_1098(gene)|go:"GO:0003951"(NAD+ kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006741"(NADP biosynthetic process)|go:"GO:0019674"(NAD metabolic process)|go:"GO:0046872"(metal ion binding)|refseq:WP_000799053.1|interpro:IPR002504(ATP-NAD/AcoX kinase)|interpro:IPR016064(ATP-NAD kinase, PpnK-type)|interpro:IPR017437(ATP-NAD kinase, PpnK-type, all-beta)|interpro:IPR017438(ATP-NAD kinase, PpnK-type, alpha/beta) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:0oMC5zLFHDh7Ibw6aksxKXKCfgs170187 rogid:b9eGU1RHSKd61onm2z70tQmF7u0170187 intact-crc:99ECFF9B910F60A6|rigid:Zg0gsqlgWjf8Hahw29NA4lLfu4o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PW7 uniprotkb:P65779 intact:EBI-6472858|ensemblbacteria:AAK75567 intact:EBI-6472853|ensemblbacteria:AAK75210|uniprotkb:Q97QV0 psi-mi:y1473_strpn(display_long)|uniprotkb:SP_1473(locus name) psi-mi:nadk_strpn(display_long)|uniprotkb:nadK(gene name)|psi-mi:nadK(display_short)|uniprotkb:ATP-dependent NAD kinase(gene name synonym)|uniprotkb:SP_1098(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474182|imex:IM-18537-160 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:SP_1473(gene)|go:"GO:0005737"(cytoplasm)|ensemblbacteria:AAK75567(transcript)|refseq:WP_000371287.1|interpro:IPR009242(Protein of unknown function DUF896, bacterial) ensemblbacteria:AAK75210(transcript)|ensemblbacteria:SP_1098(gene)|go:"GO:0003951"(NAD+ kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006741"(NADP biosynthetic process)|go:"GO:0019674"(NAD metabolic process)|go:"GO:0046872"(metal ion binding)|refseq:WP_000799053.1|interpro:IPR002504(ATP-NAD/AcoX kinase)|interpro:IPR016064(ATP-NAD kinase, PpnK-type)|interpro:IPR017437(ATP-NAD kinase, PpnK-type, all-beta)|interpro:IPR017438(ATP-NAD kinase, PpnK-type, alpha/beta) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:0oMC5zLFHDh7Ibw6aksxKXKCfgs170187 rogid:b9eGU1RHSKd61onm2z70tQmF7u0170187 intact-crc:241E1B20D5B0FBD2|rigid:Zg0gsqlgWjf8Hahw29NA4lLfu4o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PW7 uniprotkb:Q97PR7 intact:EBI-6472858|ensemblbacteria:AAK75567 intact:EBI-6474132|ensemblbacteria:AAK75623 psi-mi:y1473_strpn(display_long)|uniprotkb:SP_1473(locus name) psi-mi:y1535_strpn(display_long)|uniprotkb:SP_1535(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474193|imex:IM-18537-161 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:SP_1473(gene)|go:"GO:0005737"(cytoplasm)|ensemblbacteria:AAK75567(transcript)|refseq:WP_000371287.1|interpro:IPR009242(Protein of unknown function DUF896, bacterial) ensemblbacteria:AAK75623(transcript)|ensemblbacteria:SP_1535(gene)|refseq:WP_000349601.1|interpro:IPR000305(Excinuclease ABC, C subunit, N-terminal)|interpro:IPR035901 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:0oMC5zLFHDh7Ibw6aksxKXKCfgs170187 rogid:zuAS/yGD1TGsd0/tBZkn8oeZ84o170187 intact-crc:7DD2D4CEF0AB92B2|rigid:tmgd2RdgOO3TaNuI06ZjOSMqTvU false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPF2 uniprotkb:A0A0H2UQP0 intact:EBI-6474234|ensemblbacteria:AAK74908 intact:EBI-6474240|ensemblbacteria:AAK75553 psi-mi:a0a0h2upf2_strpn(display_long)|uniprotkb:SP_0770(locus name) psi-mi:a0a0h2uqp0_strpn(display_long)|uniprotkb:SP_1459(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474237|imex:IM-18537-164 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74908(transcript)|ensemblbacteria:SP_0770(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000025400.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|uniprotkb:Q97RN3(uniprot-removed-ac) ensemblbacteria:AAK75553(transcript)|ensemblbacteria:SP_1459(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR025134|uniprotkb:Q97PY1(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:CqUqP/aNNKkM9PI3aDscG9XP2kI170187 rogid:pZmp21M3I/2+HwyLBxcw5mRf2ns170187 intact-crc:071D6CEE3FBA0902|rigid:zTn5muqapGNFqPoZfL1sUdhLhYM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US45 uniprotkb:A0A0H2UQN3 intact:EBI-6473450|ensemblbacteria:AAK76153 intact:EBI-6473456|ensemblbacteria:AAK75559 psi-mi:a0a0h2us45_strpn(display_long)|uniprotkb:SP_2094(locus name) psi-mi:a0a0h2uqn3_strpn(display_long)|uniprotkb:SP_1465(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474204|imex:IM-18537-162 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76153(transcript)|ensemblbacteria:SP_2094(gene)|go:"GO:0004252"(serine-type endopeptidase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000658497.1|interpro:IPR022764|uniprotkb:Q97NE9(uniprot-removed-ac)|interpro:IPR035952 ensemblbacteria:AAK75559(transcript)|ensemblbacteria:SP_1465(gene)|refseq:WP_000858730.1|interpro:IPR014975(Protein of unknown function DUF1836)|uniprotkb:Q97PX5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:uvx5lqDMYXIF/sFFSHUOVnY7qbM170187 rogid:U2gnyMn706LaFzj+xof1LxVuvHg170187 intact-crc:0F73AA0F6E17EC10|rigid:RcjPmIv8GDbCDkUpv/A+f/LWGYc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQY9 uniprotkb:P65536 intact:EBI-6474223|ensemblbacteria:AAK75556 intact:EBI-6474215|ensemblbacteria:AAK76026|uniprotkb:Q97NQ9 psi-mi:a0a0h2uqy9_strpn(display_long)|uniprotkb:SP_1462(locus name) psi-mi:ndk_strpn(display_long)|uniprotkb:Nucleoside-2-P kinase(gene name synonym)|uniprotkb:SP_1959(locus name)|uniprotkb:ndk(gene name)|psi-mi:ndk(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474220|imex:IM-18537-163 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75556(transcript)|ensemblbacteria:SP_1462(gene)|refseq:WP_000889093.1|interpro:IPR006504(Conserved hypothetical protein, ArsC related)|interpro:IPR006660(Arsenate reductase and related)|uniprotkb:Q97PX8(uniprot-removed-ac)|interpro:IPR036249 interpro:IPR034907|ensemblbacteria:AAK76026(transcript)|ensemblbacteria:SP_1959(gene)|go:"GO:0004550"(nucleoside diphosphate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006183"(GTP biosynthetic process)|go:"GO:0006228"(UTP biosynthetic process)|go:"GO:0006241"(CTP biosynthetic process)|go:"GO:0046872"(metal ion binding)|interpro:IPR001564(Nucleoside diphosphate kinase, core)|interpro:IPR023005|refseq:WP_000438289.1|interpro:IPR036850 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:sxn3ZlKElpu9ZDpPlFqJj+HY81k170187 rogid:RDOSPPYvHcRWLyqI+oAKagkeiRY170187 intact-crc:179A10799D37F3A3|rigid:svrTWCDTVWgFq+4JB8UVaHm8bJM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP25 uniprotkb:A0A0H2UQL5 intact:EBI-6474265|ensemblbacteria:AAK74800 intact:EBI-6474268|ensemblbacteria:AAK75525 psi-mi:a0a0h2up25_strpn(display_long)|uniprotkb:SP_0655(locus name) psi-mi:a0a0h2uql5_strpn(display_long)|uniprotkb:SP_1428(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474262|imex:IM-18537-166 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74800(transcript)|ensemblbacteria:SP_0655(gene)|go:"GO:0006814"(sodium ion transport)|go:"GO:0015299"("solute:proton antiporter activity")|go:"GO:0016021"(integral component of membrane)|refseq:WP_000421646.1|interpro:IPR006153(Sodium/hydrogen exchanger)|interpro:IPR018422|uniprotkb:Q97RX8(uniprot-removed-ac) ensemblbacteria:AAK75525(transcript)|ensemblbacteria:SP_1428(gene)|go:"GO:0008270"(zinc ion binding)|interpro:IPR008913(Zinc finger, CHY-type)|interpro:IPR016694(Uncharacterised conserved protein UCP017292, zinc finger, CHY-type)|uniprotkb:Q97Q05(uniprot-removed-ac)|interpro:IPR037274 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:NYSLyMlRn5m+oJLgen4u51jON2M170187 rogid:8s4HempZ0vJXnusye/bf6V9apLk170187 intact-crc:0C2491EDD675A385|rigid:2QOQy1o0IpQBmhGsFSCIFWIC7Yc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPF2 uniprotkb:A0A0H2UQP0 intact:EBI-6474234|ensemblbacteria:AAK74908 intact:EBI-6474240|ensemblbacteria:AAK75553 psi-mi:a0a0h2upf2_strpn(display_long)|uniprotkb:SP_0770(locus name) psi-mi:a0a0h2uqp0_strpn(display_long)|uniprotkb:SP_1459(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474251|imex:IM-18537-165 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74908(transcript)|ensemblbacteria:SP_0770(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000025400.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|uniprotkb:Q97RN3(uniprot-removed-ac) ensemblbacteria:AAK75553(transcript)|ensemblbacteria:SP_1459(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR025134|uniprotkb:Q97PY1(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:CqUqP/aNNKkM9PI3aDscG9XP2kI170187 rogid:pZmp21M3I/2+HwyLBxcw5mRf2ns170187 intact-crc:BAEF88557B059276|rigid:zTn5muqapGNFqPoZfL1sUdhLhYM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URH3 uniprotkb:Q97QD1 intact:EBI-6473902|ensemblbacteria:AAK75816 intact:EBI-6473467|ensemblbacteria:AAK75392 psi-mi:a0a0h2urh3_strpn(display_long)|uniprotkb:SP_1740(locus name)|uniprotkb:Toxin YoeB(gene name synonym) psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474279|imex:IM-18537-167 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75816(transcript)|ensemblbacteria:SP_1740(gene)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006401"(RNA catabolic process)|refseq:WP_000924721.1|interpro:IPR009614(Addiction module toxin, Txe/YoeB)|uniprotkb:Q97PA1(uniprot-removed-ac)|interpro:IPR035093 ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tREOKjWTP2c3ZTQxzxJKuNp17co170187 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 intact-crc:8833D50BC5200776|rigid:XWXLQwvWtnAmjdJsD7OzNGec60o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NF1 uniprotkb:Q97QD1 intact:EBI-6473470|ensemblbacteria:AAK76150 intact:EBI-6473467|ensemblbacteria:AAK75392 psi-mi:gpda_strpn(display_long)|uniprotkb:"NAD(P)H-dependent glycerol-3-phosphate dehydrogenase"(gene name synonym)|uniprotkb:SP_2091(locus name)|uniprotkb:gpsA(gene name)|psi-mi:gpsA(display_short) psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474290|imex:IM-18537-168 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76150(transcript)|ensemblbacteria:SP_2091(gene)|go:"GO:0004367"(glycerol-3-phosphate dehydrogenase [NAD+] activity)|go:"GO:0005975"(carbohydrate metabolic process)|go:"GO:0006650"(glycerophospholipid metabolic process)|go:"GO:0008654"(phospholipid biosynthetic process)|go:"GO:0009331"(glycerol-3-phosphate dehydrogenase complex)|go:"GO:0046167"(glycerol-3-phosphate biosynthetic process)|go:"GO:0046168"(glycerol-3-phosphate catabolic process)|go:"GO:0051287"(NAD binding)|go:"GO:0106257"(glycerol-3-phosphate dehydrogenase [NADP+] activity)|refseq:WP_000415103.1|interpro:IPR006109(NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal)|interpro:IPR006168(NAD-dependent glycerol-3-phosphate dehydrogenase)|interpro:IPR008927(6-phosphogluconate dehydrogenase, C-terminal-like)|interpro:IPR011128(NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal)|interpro:IPR013328(Dehydrogenase, multihelical)|interpro:IPR036291 ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:xOWe8FcRiKw/NLhkbP4r0LcRjfI170187 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 intact-crc:9BF9D0633744F002|rigid:zIk+bez5Vsebi1I2qyWvGIRfhn0 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QD1 uniprotkb:A0A0H2URH3 intact:EBI-6473467|ensemblbacteria:AAK75392 intact:EBI-6473902|ensemblbacteria:AAK75816 psi-mi:y1288_strpn(display_long)|uniprotkb:SP_1288(locus name) psi-mi:a0a0h2urh3_strpn(display_long)|uniprotkb:SP_1740(locus name)|uniprotkb:Toxin YoeB(gene name synonym) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474301|imex:IM-18537-169 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75392(transcript)|ensemblbacteria:SP_1288(gene)|refseq:WP_000402066.1|interpro:IPR007394(Putative helix-turn-helix protein, YlxM/p13-like)|interpro:IPR013324(RNA polymerase sigma factor, regions 3 and 4)|interpro:IPR036388 ensemblbacteria:AAK75816(transcript)|ensemblbacteria:SP_1740(gene)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006401"(RNA catabolic process)|refseq:WP_000924721.1|interpro:IPR009614(Addiction module toxin, Txe/YoeB)|uniprotkb:Q97PA1(uniprot-removed-ac)|interpro:IPR035093 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:HDSGQCKkqlt7oi/TlbqYFJuxKww170187 rogid:tREOKjWTP2c3ZTQxzxJKuNp17co170187 intact-crc:35C131B0819F9C02|rigid:XWXLQwvWtnAmjdJsD7OzNGec60o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NV6 uniprotkb:A0A0H2UQC2 intact:EBI-6473650|ensemblbacteria:AAK75974 intact:EBI-6473653|ensemblbacteria:AAK75391 psi-mi:y1903_strpn(display_long)|uniprotkb:SP_1903(locus name) psi-mi:a0a0h2uqc2_strpn(display_long)|uniprotkb:ffh(gene name)|psi-mi:ffh(display_short)|uniprotkb:Fifty-four homolog(gene name synonym)|uniprotkb:SP_1287(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474312|imex:IM-18537-170 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75974(transcript)|ensemblbacteria:SP_1903(gene)|refseq:WP_000775321.1|interpro:IPR007295(Protein of unknown function DUF402)|interpro:IPR016882(Uncharacterised conserved protein UPF0374)|interpro:IPR035930 ensemblbacteria:AAK75391(transcript)|ensemblbacteria:SP_1287(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|go:"GO:0048500"(signal recognition particle)|refseq:WP_000863628.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR004780(Signal recognition particle, SRP)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|uniprotkb:Q97QD2(uniprot-removed-ac)|interpro:IPR036891|interpro:IPR042101 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ACk/tgpcJ++npX546oPs6gaUTw8170187 rogid:3mp8fNW3Fz4RqNfd7KxUto17vvs170187 intact-crc:B84C7816F7A86B34|rigid:AOTk/r5Dg8zj0/LTeuWjjR80QYE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97NV6 uniprotkb:A0A0H2UQC2 intact:EBI-6473650|ensemblbacteria:AAK75974 intact:EBI-6473653|ensemblbacteria:AAK75391 psi-mi:y1903_strpn(display_long)|uniprotkb:SP_1903(locus name) psi-mi:a0a0h2uqc2_strpn(display_long)|uniprotkb:ffh(gene name)|psi-mi:ffh(display_short)|uniprotkb:Fifty-four homolog(gene name synonym)|uniprotkb:SP_1287(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474323|imex:IM-18537-171 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75974(transcript)|ensemblbacteria:SP_1903(gene)|refseq:WP_000775321.1|interpro:IPR007295(Protein of unknown function DUF402)|interpro:IPR016882(Uncharacterised conserved protein UPF0374)|interpro:IPR035930 ensemblbacteria:AAK75391(transcript)|ensemblbacteria:SP_1287(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0008312"(7S RNA binding)|go:"GO:0048500"(signal recognition particle)|refseq:WP_000863628.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004125(Signal recognition particle, SRP54 subunit, M-domain)|interpro:IPR004780(Signal recognition particle, SRP)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR022941|interpro:IPR027417|uniprotkb:Q97QD2(uniprot-removed-ac)|interpro:IPR036891|interpro:IPR042101 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ACk/tgpcJ++npX546oPs6gaUTw8170187 rogid:3mp8fNW3Fz4RqNfd7KxUto17vvs170187 intact-crc:05BE9CADB317F040|rigid:AOTk/r5Dg8zj0/LTeuWjjR80QYE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP74 uniprotkb:A0A0H2UQI3 intact:EBI-6474356|ensemblbacteria:AAK74780 intact:EBI-6474362|ensemblbacteria:AAK75388 psi-mi:a0a0h2up74_strpn(display_long)|uniprotkb:SP_0629(locus name) psi-mi:a0a0h2uqi3_strpn(display_long)|uniprotkb:SP_1284(locus name)|uniprotkb:lemA(gene name)|psi-mi:lemA(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474359|imex:IM-18537-174 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74780(transcript)|ensemblbacteria:SP_0629(gene)|go:"GO:0008233"(peptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_000747771.1|interpro:IPR003709(Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins)|interpro:IPR009045(Hedgehog/DD-peptidase, zinc-binding motif)|rcsb pdb:4NT9|uniprotkb:Q97RZ7(uniprot-removed-ac) ensemblbacteria:AAK75388(transcript)|ensemblbacteria:SP_1284(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000219823.1|interpro:IPR007156(LemA)|interpro:IPR023353|uniprotkb:Q97QD5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ty7clGG0YRNHPutrDznjWwE2H+Y170187 rogid:+9C/UJSZReLZP5yV621MEfEUpew170187 intact-crc:170506AAA5DC95FF|rigid:QUYVRRc6ZoSiWScOTaJuWqkT/Tk false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URP5 uniprotkb:Q97QD4 intact:EBI-6473683|ensemblbacteria:AAK75951 intact:EBI-6473679|ensemblbacteria:AAK75389 psi-mi:a0a0h2urp5_strpn(display_long)|uniprotkb:SP_1879(locus name) psi-mi:rsmg_strpn(display_long)|uniprotkb:16S rRNA 7-methylguanosine methyltransferase(gene name synonym)|uniprotkb:SP_1285(locus name)|uniprotkb:rsmG(gene name)|psi-mi:rsmG(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474345|imex:IM-18537-173 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0016787"(hydrolase activity)|go:"GO:0046872"(metal ion binding)|ensemblbacteria:AAK75951(transcript)|ensemblbacteria:SP_1879(gene)|refseq:WP_001118962.1|rcsb pdb:3CK2|interpro:IPR000979(Protein of unknown function UPF0025)|interpro:IPR024654|interpro:IPR029052|uniprotkb:Q97NX4(uniprot-removed-ac)|interpro:IPR041802 ensemblbacteria:AAK75389(transcript)|ensemblbacteria:SP_1285(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0070043"("rRNA (guanine-N7-)-methyltransferase activity")|refseq:WP_000802934.1|interpro:IPR003682(Glucose inhibited division protein)|interpro:IPR029063 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:8d0op6UpTdT6DUGHjOVPlcaWywU170187 rogid:mMKDh3fmhRtWLy0Z21hy0dbwPwo170187 intact-crc:9483E68660DF8F80|rigid:xHCkEuEWSIlXp7B8y1qEpwxvwek false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URP5 uniprotkb:Q97QD4 intact:EBI-6473683|ensemblbacteria:AAK75951 intact:EBI-6473679|ensemblbacteria:AAK75389 psi-mi:a0a0h2urp5_strpn(display_long)|uniprotkb:SP_1879(locus name) psi-mi:rsmg_strpn(display_long)|uniprotkb:16S rRNA 7-methylguanosine methyltransferase(gene name synonym)|uniprotkb:SP_1285(locus name)|uniprotkb:rsmG(gene name)|psi-mi:rsmG(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474334|imex:IM-18537-172 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) go:"GO:0016787"(hydrolase activity)|go:"GO:0046872"(metal ion binding)|ensemblbacteria:AAK75951(transcript)|ensemblbacteria:SP_1879(gene)|refseq:WP_001118962.1|rcsb pdb:3CK2|interpro:IPR000979(Protein of unknown function UPF0025)|interpro:IPR024654|interpro:IPR029052|uniprotkb:Q97NX4(uniprot-removed-ac)|interpro:IPR041802 ensemblbacteria:AAK75389(transcript)|ensemblbacteria:SP_1285(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0070043"("rRNA (guanine-N7-)-methyltransferase activity")|refseq:WP_000802934.1|interpro:IPR003682(Glucose inhibited division protein)|interpro:IPR029063 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:8d0op6UpTdT6DUGHjOVPlcaWywU170187 rogid:mMKDh3fmhRtWLy0Z21hy0dbwPwo170187 intact-crc:2971023D246014F4|rigid:xHCkEuEWSIlXp7B8y1qEpwxvwek false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNW3 uniprotkb:A0A0H2UQB7 intact:EBI-6474374|ensemblbacteria:AAK74718 intact:EBI-6473317|ensemblbacteria:AAK75384 psi-mi:a0a0h2unw3_strpn(display_long)|uniprotkb:SP_0562(locus name) psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474377|imex:IM-18537-175 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74718(transcript)|ensemblbacteria:SP_0562(gene)|refseq:WP_000129090.1|interpro:IPR000014(PAS)|interpro:IPR007380(Protein of unknown function DUF438)|interpro:IPR012312(Hemerythrin/HHE cation-binding motif)|uniprotkb:Q97S51(uniprot-removed-ac)|interpro:IPR035965 ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:JVPB3J3xZtBx5BAKZs4UWODjfME170187 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 intact-crc:77D8CE440D593FC4|rigid:ayq4sX814sd/+L6pdGxEpZEi98Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB7 uniprotkb:A0A0H2USB7 intact:EBI-6473317|ensemblbacteria:AAK75384 intact:EBI-6473320|ensemblbacteria:AAK76260 psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:a0a0h2usb7_strpn(display_long)|uniprotkb:SP_2209(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474388|imex:IM-18537-176 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 ensemblbacteria:AAK76260(transcript)|ensemblbacteria:SP_2209(gene)|interpro:IPR001498(Protein of unknown function UPF0029, N-terminal)|interpro:IPR015269(Region of unknown function DUF1949)|interpro:IPR015796(Protein of unknown function UPF0029)|interpro:IPR020568|interpro:IPR020569|interpro:IPR023582|uniprotkb:Q97N58(uniprot-removed-ac)|refseq:WP_000395742.1|interpro:IPR035647|interpro:IPR036956 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 rogid:kYli68O6LYFOo36PukfRG03z740170187 intact-crc:94206A229FEE3BC1|rigid:gOk/T4xDZh2WCRGle+dBeFaDX+Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB7 uniprotkb:A0A0H2UNW3 intact:EBI-6473317|ensemblbacteria:AAK75384 intact:EBI-6474374|ensemblbacteria:AAK74718 psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:a0a0h2unw3_strpn(display_long)|uniprotkb:SP_0562(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474399|imex:IM-18537-177 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 ensemblbacteria:AAK74718(transcript)|ensemblbacteria:SP_0562(gene)|refseq:WP_000129090.1|interpro:IPR000014(PAS)|interpro:IPR007380(Protein of unknown function DUF438)|interpro:IPR012312(Hemerythrin/HHE cation-binding motif)|uniprotkb:Q97S51(uniprot-removed-ac)|interpro:IPR035965 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 rogid:JVPB3J3xZtBx5BAKZs4UWODjfME170187 intact-crc:CA2A2AFF49E6A4B0|rigid:ayq4sX814sd/+L6pdGxEpZEi98Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URZ6 uniprotkb:A0A0H2UQJ4 intact:EBI-6473382|ensemblbacteria:AAK76201 intact:EBI-6473388|ensemblbacteria:AAK75383 psi-mi:a0a0h2urz6_strpn(display_long)|uniprotkb:SP_2144(locus name) psi-mi:a0a0h2uqj4_strpn(display_long)|uniprotkb:nth(gene name)|psi-mi:nth(display_short)|uniprotkb:"DNA-(apurinic or apyrimidinic site) lyase"(gene name synonym)|uniprotkb:SP_1279(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474410|imex:IM-18537-178 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76201(transcript)|ensemblbacteria:SP_2144(gene)|go:"GO:0005975"(carbohydrate metabolic process)|rcsb pdb:3QPF|rcsb pdb:3QRY|rcsb pdb:3QSP|interpro:IPR008313(Uncharacterised conserved protein UCP028846)|interpro:IPR008928(Six-hairpin glycosidase-like)|uniprotkb:Q97NA8(uniprot-removed-ac)|refseq:WP_000263078.1|interpro:IPR012341(Six-hairpin glycosidase) ensemblbacteria:AAK75383(transcript)|ensemblbacteria:SP_1279(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0004519"(endonuclease activity)|go:"GO:0006284"(base-excision repair)|go:"GO:0019104"(DNA N-glycosylase activity)|go:"GO:0140078"("class I DNA-(apurinic or apyrimidinic site) endonuclease activity")|interpro:IPR000445(Helix-hairpin-helix motif)|interpro:IPR003265(HhH-GPD)|interpro:IPR004036(Endonuclease III, conserved site-2)|interpro:IPR005759(Endonuclease III/Nth)|interpro:IPR011257(DNA glycosylase)|interpro:IPR023170|uniprotkb:Q97QE0(uniprot-removed-ac)|refseq:WP_000244451.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:lDa+VJDct11ctEacrkPIrsqrI3I170187 rogid:VdV0oYrPwXMvo+lDV0i/hrf+3m0170187 intact-crc:DC7593A42A66355F|rigid:mSFknW5aLl0z2H5zlMBqsCAkWYk false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQ73 uniprotkb:A0A0H2URA2 intact:EBI-6473780|ensemblbacteria:AAK75339 intact:EBI-6473783|ensemblbacteria:AAK75854 psi-mi:a0a0h2uq73_strpn(display_long)|uniprotkb:SP_1233(locus name) psi-mi:a0a0h2ura2_strpn(display_long)|uniprotkb:SP_1781(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474448|imex:IM-18537-181 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75339(transcript)|ensemblbacteria:SP_1233(gene)|go:"GO:0016021"(integral component of membrane)|uniprotkb:Q97QH8(uniprot-removed-ac) ensemblbacteria:AAK75854(transcript)|ensemblbacteria:SP_1781(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_001188203.1|interpro:IPR006700(Protein of unknown function DUF558, methyltransferase predicted)|interpro:IPR015947(PUA-like)|interpro:IPR029026|interpro:IPR029028|uniprotkb:Q97P63(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:w9YU+/5H0y2hdjpYkOMHduE+YGs170187 rogid:dsbMXPQZmVzDWnvYKVsO6KkRytI170187 intact-crc:C1E2FDAA26336D93|rigid:eefv1K0Xa7u5hFdrwS5yhZ0IOmE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URR3 uniprotkb:A0A0H2UQF6 intact:EBI-6473639|ensemblbacteria:AAK75979 intact:EBI-6473635|ensemblbacteria:AAK75349 psi-mi:a0a0h2urr3_strpn(display_long)|uniprotkb:SP_1910(locus name) psi-mi:a0a0h2uqf6_strpn(display_long)|uniprotkb:SP_1244(locus name)|uniprotkb:ftsY(gene name)|psi-mi:ftsY(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474437|imex:IM-18537-180 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR033714|ensemblbacteria:AAK75979(transcript)|ensemblbacteria:SP_1910(gene)|go:"GO:0000049"(tRNA binding)|refseq:WP_000578285.1|interpro:IPR002547(tRNA-binding region)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR027855|uniprotkb:Q97NV1(uniprot-removed-ac)|interpro:IPR037154 ensemblbacteria:AAK75349(transcript)|ensemblbacteria:SP_1244(gene)|go:"GO:0003924"(GTPase activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006614"(SRP-dependent cotranslational protein targeting to membrane)|go:"GO:0031226"(intrinsic component of plasma membrane)|refseq:WP_000522333.1|interpro:IPR000897(Signal recognition particle, SRP54 subunit, GTPase)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004390(Cell division transporter substrate-binding protein FtsY)|interpro:IPR013822(Signal recognition particle, SRP54 subunit, helical bundle)|interpro:IPR027417|uniprotkb:Q97QH0(uniprot-removed-ac)|interpro:IPR036225|interpro:IPR042101 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zrkl2hAxpzZECa/yGaOKsVikhZY170187 rogid:peDiM+i71zADBHlVpUwakuv4CLE170187 intact-crc:D75C96837CFF25F2|rigid:BnGEBWQdJ3iH/eAsNhknEgXVTsU false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQ93 uniprotkb:Q97SR4 intact:EBI-6474424|ensemblbacteria:AAK75352 intact:EBI-2206983|ensemblbacteria:AAK74439 psi-mi:a0a0h2uq93_strpn(display_long)|uniprotkb:smc(gene name)|psi-mi:smc(display_short)|uniprotkb:SP_1247(locus name) psi-mi:ispt_strpn(display_long)|uniprotkb:uppS(gene name)|psi-mi:uppS(display_short)|uniprotkb:SP_0261(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474421|imex:IM-18537-179 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75352(transcript)|ensemblbacteria:SP_1247(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0006260"(DNA replication)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0030261"(chromosome condensation)|refseq:WP_000280892.1|interpro:IPR003395(RecF/RecN/SMC protein, N-terminal)|interpro:IPR010935(SMCs flexible hinge)|interpro:IPR011890(Chromosome segregation protein SMC)|interpro:IPR024704|interpro:IPR027417|uniprotkb:Q97QG7(uniprot-removed-ac)|interpro:IPR036277 interpro:IPR001441(Di-trans-poly-cis-decaprenylcistransferase)|interpro:IPR018520|rcsb pdb:5KH2|rcsb pdb:5KH4|rcsb pdb:5KH5|refseq:WP_000466719.1|interpro:IPR036424|ensemblbacteria:AAK74439(transcript)|ensemblbacteria:SP_0261(gene)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004659"(prenyltransferase activity) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UxqsAQCgoxeOZT9NkteB5VLIWC0170187 rogid:K1YVMTtfIRTOFLXlTBuvIZJGLGM170187 intact-crc:0B0DCDE68F0E1D12|rigid:bLGdf916YOIKxGHBco7D1e/Fmmc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URH9 uniprotkb:Q97QJ3 intact:EBI-6473801|ensemblbacteria:AAK75824 intact:EBI-6473797|ensemblbacteria:AAK75319 psi-mi:a0a0h2urh9_strpn(display_long)|uniprotkb:SP_1748(locus name) psi-mi:trub_strpn(display_long)|uniprotkb:"tRNA pseudouridine(55) synthase"(gene name synonym)|uniprotkb:tRNA pseudouridylate synthase(gene name synonym)|uniprotkb:tRNA-uridine isomerase(gene name synonym)|uniprotkb:SP_1212(locus name)|uniprotkb:truB(gene name)|psi-mi:truB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474477|imex:IM-18537-183 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75824(transcript)|ensemblbacteria:SP_1748(gene)|go:"GO:0003723"(RNA binding)|refseq:WP_000060169.1|interpro:IPR001890(CRS1/YhbY)|interpro:IPR017924|uniprotkb:Q97P93(uniprot-removed-ac)|interpro:IPR035920 ensemblbacteria:AAK75319(transcript)|ensemblbacteria:SP_1212(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0031119"(tRNA pseudouridine synthesis)|go:"GO:0106029"(tRNA pseudouridine synthase activity)|interpro:IPR032819|refseq:WP_001013240.1|interpro:IPR002501(tRNA pseudouridine synthase B, N-terminal)|interpro:IPR014780(tRNA pseudouridine synthase B, N-terminal, bacterial-type)|interpro:IPR020103 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:soOpoMdxlj9387HXgL6IBFsn0bM170187 rogid:7pbnreR3keh87Hs0bLrn5c8zxTk170187 intact-crc:54AFCF2DA8C70DC1|rigid:VSaeX5fVjBX2affaWAENsbhuZ1s false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB9 uniprotkb:A0A0H2UMV2 intact:EBI-6474463|ensemblbacteria:AAK75320 intact:EBI-6474459|ensemblbacteria:AAK74255 psi-mi:a0a0h2uqb9_strpn(display_long)|uniprotkb:SP_1213(locus name) psi-mi:a0a0h2umv2_strpn(display_long)|uniprotkb:galM(gene name)|psi-mi:galM(display_short)|uniprotkb:SP_0066(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474466|imex:IM-18537-182 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75320(transcript)|ensemblbacteria:SP_1213(gene)|refseq:WP_001002614.1|interpro:IPR019219|uniprotkb:Q97QJ2(uniprot-removed-ac) ensemblbacteria:AAK74255(transcript)|ensemblbacteria:SP_0066(gene)|go:"GO:0004034"(aldose 1-epimerase activity)|go:"GO:0019318"(hexose metabolic process)|go:"GO:0030246"(carbohydrate binding)|refseq:WP_000649425.1|interpro:IPR008183(Aldose 1-epimerase)|interpro:IPR011013(Glycoside hydrolase-type carbohydrate-binding)|interpro:IPR014718(Glycoside hydrolase-type carbohydrate-binding, subgroup)|interpro:IPR015443(Aldose-1-epimerase)|interpro:IPR018052|uniprotkb:Q97T84(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:aEDmLoczE/xaDWG7gDZwUWPxWMw170187 rogid:e3bxZbB1jKO3pc7XZM2aX75SQ4I170187 intact-crc:26D9A96581826A5B|rigid:VXCaEZtCG1XUMuMuJy5BbyBuvew false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URH9 uniprotkb:Q97QJ3 intact:EBI-6473801|ensemblbacteria:AAK75824 intact:EBI-6473797|ensemblbacteria:AAK75319 psi-mi:a0a0h2urh9_strpn(display_long)|uniprotkb:SP_1748(locus name) psi-mi:trub_strpn(display_long)|uniprotkb:"tRNA pseudouridine(55) synthase"(gene name synonym)|uniprotkb:tRNA pseudouridylate synthase(gene name synonym)|uniprotkb:tRNA-uridine isomerase(gene name synonym)|uniprotkb:SP_1212(locus name)|uniprotkb:truB(gene name)|psi-mi:truB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474488|imex:IM-18537-184 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75824(transcript)|ensemblbacteria:SP_1748(gene)|go:"GO:0003723"(RNA binding)|refseq:WP_000060169.1|interpro:IPR001890(CRS1/YhbY)|interpro:IPR017924|uniprotkb:Q97P93(uniprot-removed-ac)|interpro:IPR035920 ensemblbacteria:AAK75319(transcript)|ensemblbacteria:SP_1212(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0031119"(tRNA pseudouridine synthesis)|go:"GO:0106029"(tRNA pseudouridine synthase activity)|interpro:IPR032819|refseq:WP_001013240.1|interpro:IPR002501(tRNA pseudouridine synthase B, N-terminal)|interpro:IPR014780(tRNA pseudouridine synthase B, N-terminal, bacterial-type)|interpro:IPR020103 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:soOpoMdxlj9387HXgL6IBFsn0bM170187 rogid:7pbnreR3keh87Hs0bLrn5c8zxTk170187 intact-crc:E95D2B96EC7896B5|rigid:VSaeX5fVjBX2affaWAENsbhuZ1s false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQ34 uniprotkb:A0A0H2UPA3 intact:EBI-6474499|ensemblbacteria:AAK75286 intact:EBI-6474506|ensemblbacteria:AAK74818 psi-mi:a0a0h2uq34_strpn(display_long)|uniprotkb:SP_1177(locus name)|uniprotkb:ptsH(gene name)|psi-mi:ptsH(display_short) psi-mi:a0a0h2upa3_strpn(display_long)|uniprotkb:SP_0673(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474503|imex:IM-18537-185 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75286(transcript)|ensemblbacteria:SP_1177(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|refseq:WP_000146947.1|interpro:IPR000032(Phosphotransferase system, phosphocarrier HPr protein)|interpro:IPR001020(Phosphotransferase system, HPr histidine phosphorylation site)|interpro:IPR002114(Phosphotransferase system, HPr serine phosphorylation site)|uniprotkb:Q97QM6(uniprot-removed-ac)|interpro:IPR035895 ensemblbacteria:AAK74818(transcript)|ensemblbacteria:SP_0673(gene)|refseq:WP_000129690.1|uniprotkb:Q97RW3(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:TdFQwdSSuKk+GO74wtU8lVmBIJI170187 rogid:Rgygn44nRerB7nsTe3XWEFB5LaY170187 intact-crc:D3C4012D2713A6F4|rigid:DmFRYSiClrW8r+ZZ//7/PhUj9jM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR23 uniprotkb:A0A0H2UPY2 intact:EBI-6473959|ensemblbacteria:AAK75747 intact:EBI-6473962|ensemblbacteria:AAK75222 psi-mi:a0a0h2ur23_strpn(display_long)|uniprotkb:SP_1668(locus name) psi-mi:a0a0h2upy2_strpn(display_long)|uniprotkb:SP_1111(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474534|imex:IM-18537-187 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75747(transcript)|ensemblbacteria:SP_1668(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001055246.1|interpro:IPR011737(Conserved hypothetical protein CHP02206, TP0381)|uniprotkb:Q97PF8(uniprot-removed-ac) ensemblbacteria:AAK75222(transcript)|ensemblbacteria:SP_1111(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000592059.1|interpro:IPR003740(Protein of unknown function DUF161)|interpro:IPR019264|uniprotkb:Q97QT8(uniprot-removed-ac)|interpro:IPR015867(Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:zTEyN1J45xLB/ApJs6RKzykYNic170187 rogid:jF1x0x1Cq1Jk3vzjPPadx2MgntQ170187 intact-crc:9B04AA90DBCE8DB5|rigid:gsKcroTWr0QIt00uuSk4iImZLfI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QT7 uniprotkb:A0A0H2UPN3 intact:EBI-6474517|ensemblbacteria:AAK75223 intact:EBI-6474523|ensemblbacteria:AAK74987 psi-mi:y1112_strpn(display_long)|uniprotkb:SP_1112(locus name) psi-mi:a0a0h2upn3_strpn(display_long)|uniprotkb:SP_0859(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474520|imex:IM-18537-186 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75223(transcript)|ensemblbacteria:SP_1112(gene)|go:"GO:0008289"(lipid binding)|interpro:IPR003797(DegV)|refseq:WP_000161399.1|interpro:IPR043168 ensemblbacteria:AAK74987(transcript)|ensemblbacteria:SP_0859(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000137265.1|interpro:IPR009323(Protein of unknown function DUF979)|uniprotkb:Q97RG2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:wEEsGusbjBL0lcxdvhiZm2WY86A170187 rogid:nttsJ67lOZq7P7cgQvnrVXozdZo170187 intact-crc:DCA40F2CFCE17B19|rigid:dQLl/BLiZidicfAjdaVWTmpRLMM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPY2 uniprotkb:A0A0H2UR23 intact:EBI-6473962|ensemblbacteria:AAK75222 intact:EBI-6473959|ensemblbacteria:AAK75747 psi-mi:a0a0h2upy2_strpn(display_long)|uniprotkb:SP_1111(locus name) psi-mi:a0a0h2ur23_strpn(display_long)|uniprotkb:SP_1668(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474545|imex:IM-18537-188 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75222(transcript)|ensemblbacteria:SP_1111(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000592059.1|interpro:IPR003740(Protein of unknown function DUF161)|interpro:IPR019264|uniprotkb:Q97QT8(uniprot-removed-ac)|interpro:IPR015867(Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal) ensemblbacteria:AAK75747(transcript)|ensemblbacteria:SP_1668(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001055246.1|interpro:IPR011737(Conserved hypothetical protein CHP02206, TP0381)|uniprotkb:Q97PF8(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jF1x0x1Cq1Jk3vzjPPadx2MgntQ170187 rogid:zTEyN1J45xLB/ApJs6RKzykYNic170187 intact-crc:26F64E2B9F7116C1|rigid:gsKcroTWr0QIt00uuSk4iImZLfI false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV6 uniprotkb:P05382 intact:EBI-6472250|ensemblbacteria:AAK75182 intact:EBI-2206997|ensemblbacteria:AAK74467 psi-mi:a0a0h2upv6_strpn(display_long)|uniprotkb:SP_1069(locus name) psi-mi:dhps_strpn(display_long)|uniprotkb:sulA(gene name)|psi-mi:sulA(display_short)|uniprotkb:Dihydropteroate pyrophosphorylase(gene name synonym)|uniprotkb:SP_0289(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474567|imex:IM-18537-190 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75182(transcript)|ensemblbacteria:SP_1069(gene)|rcsb pdb:3LFT|interpro:IPR007487(ABC transporter substrate binding protein)|interpro:IPR028082|uniprotkb:Q97QX5(uniprot-removed-ac) interpro:IPR006390(Dihydropteroate synthase)|interpro:IPR011005(Dihydropteroate synthase-like)|interpro:IPR000489(Dihydropteroate synthase, DHPS)|ensemblbacteria:AAK74467(transcript)|ensemblbacteria:SP_0289(gene)|go:"GO:0004156"(dihydropteroate synthase activity)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0046872"(metal ion binding) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tdS0lx8TPCRR0wSC8lyC158Ns2I170187 rogid:VGUM1bg8Uwmg+bQxMG5i4KGVM0k170187 intact-crc:022E082980B57CCF|rigid:/yCMgnKIwx5iHGceLdo89UH9f9o false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV6 uniprotkb:P05382 intact:EBI-6472250|ensemblbacteria:AAK75182 intact:EBI-2206997|ensemblbacteria:AAK74467 psi-mi:a0a0h2upv6_strpn(display_long)|uniprotkb:SP_1069(locus name) psi-mi:dhps_strpn(display_long)|uniprotkb:sulA(gene name)|psi-mi:sulA(display_short)|uniprotkb:Dihydropteroate pyrophosphorylase(gene name synonym)|uniprotkb:SP_0289(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474556|imex:IM-18537-189 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75182(transcript)|ensemblbacteria:SP_1069(gene)|rcsb pdb:3LFT|interpro:IPR007487(ABC transporter substrate binding protein)|interpro:IPR028082|uniprotkb:Q97QX5(uniprot-removed-ac) interpro:IPR006390(Dihydropteroate synthase)|interpro:IPR011005(Dihydropteroate synthase-like)|interpro:IPR000489(Dihydropteroate synthase, DHPS)|ensemblbacteria:AAK74467(transcript)|ensemblbacteria:SP_0289(gene)|go:"GO:0004156"(dihydropteroate synthase activity)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046656"(folic acid biosynthetic process)|go:"GO:0046872"(metal ion binding) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tdS0lx8TPCRR0wSC8lyC158Ns2I170187 rogid:VGUM1bg8Uwmg+bQxMG5i4KGVM0k170187 intact-crc:BFDCEC92C40AE7BB|rigid:/yCMgnKIwx5iHGceLdo89UH9f9o false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV5 uniprotkb:A0A0H2UNG1 intact:EBI-6474581|ensemblbacteria:AAK75095 intact:EBI-6474578|ensemblbacteria:AAK74540 psi-mi:a0a0h2upv5_strpn(display_long)|uniprotkb:SP_0974(locus name) psi-mi:a0a0h2ung1_strpn(display_long)|uniprotkb:SP_0373(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474584|imex:IM-18537-191 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75095(transcript)|ensemblbacteria:SP_0974(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000282517.1|interpro:IPR004692(Preprotein translocase SecG subunit)|uniprotkb:Q97R58(uniprot-removed-ac) ensemblbacteria:AAK74540(transcript)|ensemblbacteria:SP_0373(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000711388.1|interpro:IPR000241(Putative RNA methylase)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR004114(THUMP)|interpro:IPR029063|uniprotkb:Q97SI8(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KOr2TXnA3XiqlTrg0ogoB398bOY170187 rogid:gDCkKljvebgny4vsp4/P8aX0QvU170187 intact-crc:6AF22843FF8C9910|rigid:Q1G+HLaEuXfzbM338tr/PADKEtM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPV5 uniprotkb:A0A0H2UNG1 intact:EBI-6474581|ensemblbacteria:AAK75095 intact:EBI-6474578|ensemblbacteria:AAK74540 psi-mi:a0a0h2upv5_strpn(display_long)|uniprotkb:SP_0974(locus name) psi-mi:a0a0h2ung1_strpn(display_long)|uniprotkb:SP_0373(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474595|imex:IM-18537-192 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75095(transcript)|ensemblbacteria:SP_0974(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000282517.1|interpro:IPR004692(Preprotein translocase SecG subunit)|uniprotkb:Q97R58(uniprot-removed-ac) ensemblbacteria:AAK74540(transcript)|ensemblbacteria:SP_0373(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000711388.1|interpro:IPR000241(Putative RNA methylase)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR004114(THUMP)|interpro:IPR029063|uniprotkb:Q97SI8(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:KOr2TXnA3XiqlTrg0ogoB398bOY170187 rogid:gDCkKljvebgny4vsp4/P8aX0QvU170187 intact-crc:D700CCF8BB330264|rigid:Q1G+HLaEuXfzbM338tr/PADKEtM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMS9 uniprotkb:Q97R80 intact:EBI-6474612|ensemblbacteria:AAK74219 intact:EBI-6474606|ensemblbacteria:AAK75070 psi-mi:a0a0h2ums9_strpn(display_long)|uniprotkb:SP_0029(locus name) psi-mi:y947_strpn(display_long)|uniprotkb:SP_0947(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474609|imex:IM-18537-193 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74219(transcript)|ensemblbacteria:SP_0029(gene)|uniprotkb:Q97TB3(uniprot-removed-ac)|refseq:WP_000492733.1 ensemblbacteria:AAK75070(transcript)|ensemblbacteria:SP_0947(gene)|interpro:IPR010673(Protein of unknown function DUF1250)|interpro:IPR023089|refseq:WP_001232085.1|interpro:IPR036806 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:XOIVUCinRBc7hg2M8np9DVMLWbI170187 rogid:ITF03ygbsuc/x8446FlYIE/tpDo170187 intact-crc:21C48DD1BC360F33|rigid:1zoNkByaOyeJjMk1pEqXYg/l/YA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97R80 uniprotkb:A0A0H2UMS9 intact:EBI-6474606|ensemblbacteria:AAK75070 intact:EBI-6474612|ensemblbacteria:AAK74219 psi-mi:y947_strpn(display_long)|uniprotkb:SP_0947(locus name) psi-mi:a0a0h2ums9_strpn(display_long)|uniprotkb:SP_0029(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474623|imex:IM-18537-194 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75070(transcript)|ensemblbacteria:SP_0947(gene)|interpro:IPR010673(Protein of unknown function DUF1250)|interpro:IPR023089|refseq:WP_001232085.1|interpro:IPR036806 ensemblbacteria:AAK74219(transcript)|ensemblbacteria:SP_0029(gene)|uniprotkb:Q97TB3(uniprot-removed-ac)|refseq:WP_000492733.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ITF03ygbsuc/x8446FlYIE/tpDo170187 rogid:XOIVUCinRBc7hg2M8np9DVMLWbI170187 intact-crc:9C36696AF8899447|rigid:1zoNkByaOyeJjMk1pEqXYg/l/YA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97R91 uniprotkb:Q97P99 intact:EBI-6473884|ensemblbacteria:AAK75059 intact:EBI-6473888|ensemblbacteria:AAK75818 psi-mi:kthy_strpn(display_long)|uniprotkb:dTMP kinase(gene name synonym)|uniprotkb:SP_0935(locus name)|uniprotkb:tmk(gene name)|psi-mi:tmk(display_short) psi-mi:tmcal_strpn(display_long)|uniprotkb:tmcAL(gene name)|psi-mi:tmcAL(display_short)|uniprotkb:SP_1742(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474645|imex:IM-18537-196 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75059(transcript)|ensemblbacteria:SP_0935(gene)|go:"GO:0004798"(thymidylate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006233"(dTDP biosynthetic process)|go:"GO:0006235"(dTTP biosynthetic process)|refseq:WP_000033362.1|interpro:IPR018094|interpro:IPR018095|interpro:IPR027417|interpro:IPR039430 ensemblbacteria:AAK75818(transcript)|ensemblbacteria:SP_1742(gene)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0006400"(tRNA modification)|go:"GO:0016879"(ligase activity, forming carbon-nitrogen bonds)|go:"GO:0005737"(cytoplasm)|refseq:WP_000156358.1|interpro:IPR008513(Protein of unknown function DUF795)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:5u8roH9pLRRt4rac1+LJhSUvKAQ170187 rogid:JY4051MmP3MV/mHVxnZNXbfK8ks170187 intact-crc:917DBD759A0E7233|rigid:qYRzV0istsN6lGl6xudg8tUt/i0 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97P99 uniprotkb:Q97R91 intact:EBI-6473888|ensemblbacteria:AAK75818 intact:EBI-6473884|ensemblbacteria:AAK75059 psi-mi:tmcal_strpn(display_long)|uniprotkb:tmcAL(gene name)|psi-mi:tmcAL(display_short)|uniprotkb:SP_1742(locus name) psi-mi:kthy_strpn(display_long)|uniprotkb:dTMP kinase(gene name synonym)|uniprotkb:SP_0935(locus name)|uniprotkb:tmk(gene name)|psi-mi:tmk(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474634|imex:IM-18537-195 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75818(transcript)|ensemblbacteria:SP_1742(gene)|go:"GO:0000049"(tRNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0006400"(tRNA modification)|go:"GO:0016879"(ligase activity, forming carbon-nitrogen bonds)|go:"GO:0005737"(cytoplasm)|refseq:WP_000156358.1|interpro:IPR008513(Protein of unknown function DUF795)|interpro:IPR014729(Rossmann-like alpha/beta/alpha sandwich fold) ensemblbacteria:AAK75059(transcript)|ensemblbacteria:SP_0935(gene)|go:"GO:0004798"(thymidylate kinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006233"(dTDP biosynthetic process)|go:"GO:0006235"(dTTP biosynthetic process)|refseq:WP_000033362.1|interpro:IPR018094|interpro:IPR018095|interpro:IPR027417|interpro:IPR039430 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:JY4051MmP3MV/mHVxnZNXbfK8ks170187 rogid:5u8roH9pLRRt4rac1+LJhSUvKAQ170187 intact-crc:2C8F59CEDEB1E947|rigid:qYRzV0istsN6lGl6xudg8tUt/i0 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPM2 uniprotkb:A0A0H2UPC2 intact:EBI-6474659|ensemblbacteria:AAK74992 intact:EBI-6474656|ensemblbacteria:AAK74929 psi-mi:a0a0h2upm2_strpn(display_long)|uniprotkb:SP_0865(locus name)|uniprotkb:dnaX(gene name)|psi-mi:dnaX(display_short) psi-mi:a0a0h2upc2_strpn(display_long)|uniprotkb:SP_0792(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474674|imex:IM-18537-198 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74992(transcript)|ensemblbacteria:SP_0865(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006260"(DNA replication)|go:"GO:0009360"(DNA polymerase III complex)|refseq:WP_000283783.1|interpro:IPR001270(Chaperonin clpA/B)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008921(DNA polymerase III clamp loader subunit, C-terminal)|interpro:IPR012763(DNA polymerase III, subunits gamma and tau)|interpro:IPR022754|interpro:IPR027417|uniprotkb:Q97RF7(uniprot-removed-ac) ensemblbacteria:AAK74929(transcript)|ensemblbacteria:SP_0792(gene)|interpro:IPR021361|uniprotkb:Q97RL2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:PKRiGBVokSIW7Vwe/WCJCa7bNdU170187 rogid:1hs474zHkPjO6010yikBooONouc170187 intact-crc:B7CCBC2CA8A032DC|rigid:OEH99f6GUHlH7uUTd/zs1dAGaDA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPC2 uniprotkb:A0A0H2UPM2 intact:EBI-6474656|ensemblbacteria:AAK74929 intact:EBI-6474659|ensemblbacteria:AAK74992 psi-mi:a0a0h2upc2_strpn(display_long)|uniprotkb:SP_0792(locus name) psi-mi:a0a0h2upm2_strpn(display_long)|uniprotkb:SP_0865(locus name)|uniprotkb:dnaX(gene name)|psi-mi:dnaX(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474663|imex:IM-18537-197 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74929(transcript)|ensemblbacteria:SP_0792(gene)|interpro:IPR021361|uniprotkb:Q97RL2(uniprot-removed-ac) ensemblbacteria:AAK74992(transcript)|ensemblbacteria:SP_0865(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006260"(DNA replication)|go:"GO:0009360"(DNA polymerase III complex)|refseq:WP_000283783.1|interpro:IPR001270(Chaperonin clpA/B)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008921(DNA polymerase III clamp loader subunit, C-terminal)|interpro:IPR012763(DNA polymerase III, subunits gamma and tau)|interpro:IPR022754|interpro:IPR027417|uniprotkb:Q97RF7(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:1hs474zHkPjO6010yikBooONouc170187 rogid:PKRiGBVokSIW7Vwe/WCJCa7bNdU170187 intact-crc:0A3E5897EC1FA9A8|rigid:OEH99f6GUHlH7uUTd/zs1dAGaDA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97QT7 uniprotkb:A0A0H2UPN3 intact:EBI-6474517|ensemblbacteria:AAK75223 intact:EBI-6474523|ensemblbacteria:AAK74987 psi-mi:y1112_strpn(display_long)|uniprotkb:SP_1112(locus name) psi-mi:a0a0h2upn3_strpn(display_long)|uniprotkb:SP_0859(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474685|imex:IM-18537-199 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75223(transcript)|ensemblbacteria:SP_1112(gene)|go:"GO:0008289"(lipid binding)|interpro:IPR003797(DegV)|refseq:WP_000161399.1|interpro:IPR043168 ensemblbacteria:AAK74987(transcript)|ensemblbacteria:SP_0859(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000137265.1|interpro:IPR009323(Protein of unknown function DUF979)|uniprotkb:Q97RG2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:wEEsGusbjBL0lcxdvhiZm2WY86A170187 rogid:nttsJ67lOZq7P7cgQvnrVXozdZo170187 intact-crc:89CC6F5FFA30C0CF|rigid:dQLl/BLiZidicfAjdaVWTmpRLMM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URQ1 uniprotkb:A0A0H2UPK7 intact:EBI-6473593|ensemblbacteria:AAK76023 intact:EBI-6473599|ensemblbacteria:AAK74972 psi-mi:a0a0h2urq1_strpn(display_long)|uniprotkb:SP_1956(locus name) psi-mi:a0a0h2upk7_strpn(display_long)|uniprotkb:SP_0841(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474696|imex:IM-18537-200 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76023(transcript)|ensemblbacteria:SP_1956(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000078816.1|interpro:IPR006541(Bacteriocin-associated integral membrane protein)|uniprotkb:Q97NR2(uniprot-removed-ac) ensemblbacteria:AAK74972(transcript)|ensemblbacteria:SP_0841(gene)|go:"GO:0008168"(methyltransferase activity)|refseq:WP_001809884.1|interpro:IPR007848(Methyltransferase small)|interpro:IPR029063|uniprotkb:Q97RH4(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:b6zCV0uvZ/JyVNvzcInq3dQ2Jy8170187 rogid:fbVYQoZKoUUdPeKJbilVUYYnytE170187 intact-crc:497734F4F465559A|rigid:auCCh59hXHJ5LPdiw2M92RDrO9c false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPE1 uniprotkb:A0A0H2UR62 intact:EBI-6473934|ensemblbacteria:AAK74954 intact:EBI-6473927|ensemblbacteria:AAK75798 psi-mi:a0a0h2upe1_strpn(display_long)|uniprotkb:SP_0822(locus name) psi-mi:a0a0h2ur62_strpn(display_long)|uniprotkb:SP_1721(locus name)|uniprotkb:scrK(gene name)|psi-mi:scrK(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474707|imex:IM-18537-201 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74954(transcript)|ensemblbacteria:SP_0822(gene)|refseq:WP_000443573.1|interpro:IPR014904(Protein of unknown function DUF1797)|uniprotkb:Q97RJ2(uniprot-removed-ac)|interpro:IPR038073 ensemblbacteria:AAK75798(transcript)|ensemblbacteria:SP_1721(gene)|go:"GO:0008865"(fructokinase activity)|refseq:WP_000164302.1|interpro:IPR000600(ROK)|uniprotkb:Q97PB9(uniprot-removed-ac)|interpro:IPR043129 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:YH/4VcfuzjKIY961RYTbMEKvcyQ170187 rogid:dUhdHqgUECEFwMSowh8Gk082pEk170187 intact-crc:4CDFDC641A730DEF|rigid:Xba0uEfpqDcpNMVxACvORXudyu4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UR62 uniprotkb:A0A0H2UPE1 intact:EBI-6473927|ensemblbacteria:AAK75798 intact:EBI-6473934|ensemblbacteria:AAK74954 psi-mi:a0a0h2ur62_strpn(display_long)|uniprotkb:SP_1721(locus name)|uniprotkb:scrK(gene name)|psi-mi:scrK(display_short) psi-mi:a0a0h2upe1_strpn(display_long)|uniprotkb:SP_0822(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474718|imex:IM-18537-202 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75798(transcript)|ensemblbacteria:SP_1721(gene)|go:"GO:0008865"(fructokinase activity)|refseq:WP_000164302.1|interpro:IPR000600(ROK)|uniprotkb:Q97PB9(uniprot-removed-ac)|interpro:IPR043129 ensemblbacteria:AAK74954(transcript)|ensemblbacteria:SP_0822(gene)|refseq:WP_000443573.1|interpro:IPR014904(Protein of unknown function DUF1797)|uniprotkb:Q97RJ2(uniprot-removed-ac)|interpro:IPR038073 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dUhdHqgUECEFwMSowh8Gk082pEk170187 rogid:YH/4VcfuzjKIY961RYTbMEKvcyQ170187 intact-crc:F12D38DF5ECC969B|rigid:Xba0uEfpqDcpNMVxACvORXudyu4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPC2 uniprotkb:A0A0H2UPM2 intact:EBI-6474656|ensemblbacteria:AAK74929 intact:EBI-6474659|ensemblbacteria:AAK74992 psi-mi:a0a0h2upc2_strpn(display_long)|uniprotkb:SP_0792(locus name) psi-mi:a0a0h2upm2_strpn(display_long)|uniprotkb:SP_0865(locus name)|uniprotkb:dnaX(gene name)|psi-mi:dnaX(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474729|imex:IM-18537-203 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74929(transcript)|ensemblbacteria:SP_0792(gene)|interpro:IPR021361|uniprotkb:Q97RL2(uniprot-removed-ac) ensemblbacteria:AAK74992(transcript)|ensemblbacteria:SP_0865(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003887"(DNA-directed DNA polymerase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0006260"(DNA replication)|go:"GO:0009360"(DNA polymerase III complex)|refseq:WP_000283783.1|interpro:IPR001270(Chaperonin clpA/B)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR008921(DNA polymerase III clamp loader subunit, C-terminal)|interpro:IPR012763(DNA polymerase III, subunits gamma and tau)|interpro:IPR022754|interpro:IPR027417|uniprotkb:Q97RF7(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:1hs474zHkPjO6010yikBooONouc170187 rogid:PKRiGBVokSIW7Vwe/WCJCa7bNdU170187 intact-crc:E2A4DC5FAE71890A|rigid:OEH99f6GUHlH7uUTd/zs1dAGaDA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPA7 uniprotkb:A0A0H2UNJ7 intact:EBI-6472167|ensemblbacteria:AAK74919 intact:EBI-6472170|ensemblbacteria:AAK74586 psi-mi:a0a0h2upa7_strpn(display_long)|uniprotkb:SP_0782(locus name) psi-mi:a0a0h2unj7_strpn(display_long)|uniprotkb:SP_0423(locus name)|uniprotkb:accB(gene name)|psi-mi:accB(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474740|imex:IM-18537-204 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74919(transcript)|ensemblbacteria:SP_0782(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|refseq:WP_001843933.1|rcsb pdb:2L3A|rcsb pdb:3OBH|rcsb pdb:4G06|interpro:IPR003173(Transcriptional coactivator p15)|interpro:IPR017154(Uncharacterised conserved protein UCP037246)|uniprotkb:Q97RM2(uniprot-removed-ac)|rcsb pdb:5ZKM ensemblbacteria:AAK74586(transcript)|ensemblbacteria:SP_0423(gene)|go:"GO:0003989"(acetyl-CoA carboxylase activity)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0009317"(acetyl-CoA carboxylase complex)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR001249(Acetyl-CoA biotin carboxyl carrier)|interpro:IPR001882(Biotin-binding site)|interpro:IPR011053(Single hybrid motif)|uniprotkb:I6L8P7(uniprot-removed-ac)|refseq:WP_001052244.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:dxXe/q1G2KD1sqMUSDBh+2hMEdI170187 rogid:unmV8krjj0KdHwXQtBfwAxchEUQ170187 intact-crc:9FE7D72FC0DBF63E|rigid:rSqC2pvDrBWcur/mjFPEAG/ZOcg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNJ7 uniprotkb:A0A0H2UPA7 intact:EBI-6472170|ensemblbacteria:AAK74586 intact:EBI-6472167|ensemblbacteria:AAK74919 psi-mi:a0a0h2unj7_strpn(display_long)|uniprotkb:SP_0423(locus name)|uniprotkb:accB(gene name)|psi-mi:accB(display_short) psi-mi:a0a0h2upa7_strpn(display_long)|uniprotkb:SP_0782(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474751|imex:IM-18537-205 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74586(transcript)|ensemblbacteria:SP_0423(gene)|go:"GO:0003989"(acetyl-CoA carboxylase activity)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0009317"(acetyl-CoA carboxylase complex)|interpro:IPR000089(Biotin/lipoyl attachment)|interpro:IPR001249(Acetyl-CoA biotin carboxyl carrier)|interpro:IPR001882(Biotin-binding site)|interpro:IPR011053(Single hybrid motif)|uniprotkb:I6L8P7(uniprot-removed-ac)|refseq:WP_001052244.1 ensemblbacteria:AAK74919(transcript)|ensemblbacteria:SP_0782(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|refseq:WP_001843933.1|rcsb pdb:2L3A|rcsb pdb:3OBH|rcsb pdb:4G06|interpro:IPR003173(Transcriptional coactivator p15)|interpro:IPR017154(Uncharacterised conserved protein UCP037246)|uniprotkb:Q97RM2(uniprot-removed-ac)|rcsb pdb:5ZKM - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:unmV8krjj0KdHwXQtBfwAxchEUQ170187 rogid:dxXe/q1G2KD1sqMUSDBh+2hMEdI170187 intact-crc:2215339484646D4A|rigid:rSqC2pvDrBWcur/mjFPEAG/ZOcg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPF2 uniprotkb:A0A0H2UQP0 intact:EBI-6474234|ensemblbacteria:AAK74908 intact:EBI-6474240|ensemblbacteria:AAK75553 psi-mi:a0a0h2upf2_strpn(display_long)|uniprotkb:SP_0770(locus name) psi-mi:a0a0h2uqp0_strpn(display_long)|uniprotkb:SP_1459(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474762|imex:IM-18537-206 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74908(transcript)|ensemblbacteria:SP_0770(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000025400.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|uniprotkb:Q97RN3(uniprot-removed-ac) ensemblbacteria:AAK75553(transcript)|ensemblbacteria:SP_1459(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR025134|uniprotkb:Q97PY1(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:CqUqP/aNNKkM9PI3aDscG9XP2kI170187 rogid:pZmp21M3I/2+HwyLBxcw5mRf2ns170187 intact-crc:52750C9D396BB2D4|rigid:zTn5muqapGNFqPoZfL1sUdhLhYM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPF2 uniprotkb:A0A0H2UQP0 intact:EBI-6474234|ensemblbacteria:AAK74908 intact:EBI-6474240|ensemblbacteria:AAK75553 psi-mi:a0a0h2upf2_strpn(display_long)|uniprotkb:SP_0770(locus name) psi-mi:a0a0h2uqp0_strpn(display_long)|uniprotkb:SP_1459(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474773|imex:IM-18537-207 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74908(transcript)|ensemblbacteria:SP_0770(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000025400.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR027417|interpro:IPR032781|uniprotkb:Q97RN3(uniprot-removed-ac) ensemblbacteria:AAK75553(transcript)|ensemblbacteria:SP_1459(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR025134|uniprotkb:Q97PY1(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:CqUqP/aNNKkM9PI3aDscG9XP2kI170187 rogid:pZmp21M3I/2+HwyLBxcw5mRf2ns170187 intact-crc:EF87E8267DD429A0|rigid:zTn5muqapGNFqPoZfL1sUdhLhYM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB2 uniprotkb:Q97RN5 intact:EBI-6474788|ensemblbacteria:AAK75311 intact:EBI-6474784|ensemblbacteria:AAK74906 psi-mi:a0a0h2uqb2_strpn(display_long)|uniprotkb:SP_1204(locus name) psi-mi:rlmn_strpn(display_long)|uniprotkb:"23S rRNA (adenine(2503)-C(2))-methyltransferase"(gene name synonym)|uniprotkb:23S rRNA m2A2503 methyltransferase(gene name synonym)|uniprotkb:Ribosomal RNA large subunit methyltransferase N(gene name synonym)|uniprotkb:"tRNA (adenine(37)-C(2))-methyltransferase"(gene name synonym)|uniprotkb:tRNA m2A37 methyltransferase(gene name synonym)|uniprotkb:SP_0768(locus name)|uniprotkb:rlmN(gene name)|psi-mi:rlmN(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474791|imex:IM-18537-208 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75311(transcript)|ensemblbacteria:SP_1204(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|interpro:IPR002877(Ribosomal RNA methyltransferase RrmJ/FtsJ)|interpro:IPR029063|interpro:IPR004538(Haemolysin A)|uniprotkb:Q97QK1(uniprot-removed-ac) interpro:IPR040072|ensemblbacteria:AAK74906(transcript)|ensemblbacteria:SP_0768(gene)|go:"GO:0000049"(tRNA binding)|go:"GO:0002935"("tRNA (adenine-C2-)-methyltransferase activity")|go:"GO:0005737"(cytoplasm)|go:"GO:0019843"(rRNA binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0070040"("rRNA (adenine-C2-)-methyltransferase activity")|go:"GO:0070475"(rRNA base methylation)|interpro:IPR013785(Aldolase-type TIM barrel)|interpro:IPR004383(Conserved hypothetical protein CHP00048)|interpro:IPR007197(Radical SAM)|interpro:IPR027492|refseq:WP_000804659.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:iDEWz39st2/v59Ggw7o/qcbiTiE170187 rogid:rqCzsjlb3DTXj+SR0lDwpWqiRwY170187 intact-crc:F28EEDAA5C780649|rigid:fVrBGjWhyD+CP5S4cjPJTkcYOF0 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPA1 uniprotkb:P65582 intact:EBI-6474805|ensemblbacteria:AAK74905 intact:EBI-6474808|ensemblbacteria:AAK74595|uniprotkb:Q97SF0 psi-mi:a0a0h2upa1_strpn(display_long)|uniprotkb:SP_0767(locus name) psi-mi:nusb_strpn(display_long)|uniprotkb:nusB(gene name)|psi-mi:nusB(display_short)|uniprotkb:Antitermination factor NusB(gene name synonym)|uniprotkb:SP_0433(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474802|imex:IM-18537-209 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74905(transcript)|ensemblbacteria:SP_0767(gene)|refseq:WP_001224350.1|interpro:IPR009370(Protein of unknown function DUF1027)|uniprotkb:Q97RN6(uniprot-removed-ac)|interpro:IPR038141 ensemblbacteria:AAK74595(transcript)|ensemblbacteria:SP_0433(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0031564"(transcription antitermination)|interpro:IPR006027(NusB/RsmB/TIM44)|interpro:IPR011605(NusB antitermination factor)|refseq:WP_000203654.1|interpro:IPR035926 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:a1jcLC+RWAXtYfpa/1cuF8YLzys170187 rogid:on/VdweAANHIv4n14UEpEaxfYYU170187 intact-crc:B8B401AF265FF8D2|rigid:UwLZI4eDCk7FC5UYJGl+6ngrZuE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:P65582 uniprotkb:A0A0H2UPA1 intact:EBI-6474808|ensemblbacteria:AAK74595|uniprotkb:Q97SF0 intact:EBI-6474805|ensemblbacteria:AAK74905 psi-mi:nusb_strpn(display_long)|uniprotkb:nusB(gene name)|psi-mi:nusB(display_short)|uniprotkb:Antitermination factor NusB(gene name synonym)|uniprotkb:SP_0433(locus name) psi-mi:a0a0h2upa1_strpn(display_long)|uniprotkb:SP_0767(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474821|imex:IM-18537-210 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74595(transcript)|ensemblbacteria:SP_0433(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0006353"(DNA-templated transcription, termination)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0031564"(transcription antitermination)|interpro:IPR006027(NusB/RsmB/TIM44)|interpro:IPR011605(NusB antitermination factor)|refseq:WP_000203654.1|interpro:IPR035926 ensemblbacteria:AAK74905(transcript)|ensemblbacteria:SP_0767(gene)|refseq:WP_001224350.1|interpro:IPR009370(Protein of unknown function DUF1027)|uniprotkb:Q97RN6(uniprot-removed-ac)|interpro:IPR038141 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:on/VdweAANHIv4n14UEpEaxfYYU170187 rogid:a1jcLC+RWAXtYfpa/1cuF8YLzys170187 intact-crc:0546E51462E063A6|rigid:UwLZI4eDCk7FC5UYJGl+6ngrZuE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97RU8 uniprotkb:A0A0H2URL1 intact:EBI-6473754|ensemblbacteria:AAK74833 intact:EBI-6473748|ensemblbacteria:AAK75858 psi-mi:murd_strpn(display_long)|uniprotkb:D-glutamic acid-adding enzyme(gene name synonym)|uniprotkb:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase(gene name synonym)|uniprotkb:SP_0688(locus name)|uniprotkb:murD(gene name)|psi-mi:murD(display_short) psi-mi:a0a0h2url1_strpn(display_long)|uniprotkb:SP_1785(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474832|imex:IM-18537-211 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74833(transcript)|ensemblbacteria:SP_0688(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0007049"(cell cycle)|go:"GO:0008360"(regulation of cell shape)|go:"GO:0008764"(UDP-N-acetylmuramoylalanine-D-glutamate ligase activity)|go:"GO:0009252"(peptidoglycan biosynthetic process)|go:"GO:0051301"(cell division)|go:"GO:0071555"(cell wall organization)|refseq:WP_000863037.1|interpro:IPR004101(Mur ligase, C-terminal)|interpro:IPR005762(UDP-N-acetylmuramoylalanine-D-glutamate ligase)|interpro:IPR013221(Mur ligase, central)|interpro:IPR036565|interpro:IPR036615 ensemblbacteria:AAK75858(transcript)|ensemblbacteria:SP_1785(gene)|refseq:WP_000257087.1|interpro:IPR021380|uniprotkb:Q97P59(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:vi3Sf3CA4OpJIVNb0FhExXVNZSk170187 rogid:JCOdlMnl32+IzxxDVK27LX0Z71k170187 intact-crc:71AC251E7458EBDC|rigid:c6b4UQVpNvzwgzlW1ufKDgssO8w false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SA4 uniprotkb:Q97RW5 intact:EBI-6474861|ensemblbacteria:AAK74641 intact:EBI-6474857|ensemblbacteria:AAK74816 psi-mi:y482_strpn(display_long)|uniprotkb:SP_0482(locus name) psi-mi:miaa_strpn(display_long)|uniprotkb:"Dimethylallyl diphosphate:tRNA dimethylallyltransferase"(gene name synonym)|uniprotkb:"Isopentenyl-diphosphate:tRNA isopentenyltransferase"(gene name synonym)|uniprotkb:SP_0671(locus name)|uniprotkb:miaA(gene name)|psi-mi:miaA(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474854|imex:IM-18537-213 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74641(transcript)|ensemblbacteria:SP_0482(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009825(Protein of unknown function DUF1393)|interpro:IPR022914|refseq:WP_000403169.1 interpro:IPR039657|ensemblbacteria:AAK74816(transcript)|ensemblbacteria:SP_0671(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0008033"(tRNA processing)|go:"GO:0052381"(tRNA dimethylallyltransferase activity)|interpro:IPR018022|interpro:IPR027417|refseq:WP_000850193.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:m44+Qqp+1n1aq4JELO/kwmJFI/E170187 rogid:tLcJuLup0RxEUbWs5FIZdn4u4cw170187 intact-crc:30692600AF6D61F4|rigid:Az4hi9ulMp14hvSdj4kEq49JN8I false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UPA3 uniprotkb:A0A0H2UQ34 intact:EBI-6474506|ensemblbacteria:AAK74818 intact:EBI-6474499|ensemblbacteria:AAK75286 psi-mi:a0a0h2upa3_strpn(display_long)|uniprotkb:SP_0673(locus name) psi-mi:a0a0h2uq34_strpn(display_long)|uniprotkb:SP_1177(locus name)|uniprotkb:ptsH(gene name)|psi-mi:ptsH(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474843|imex:IM-18537-212 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74818(transcript)|ensemblbacteria:SP_0673(gene)|refseq:WP_000129690.1|uniprotkb:Q97RW3(uniprot-removed-ac) ensemblbacteria:AAK75286(transcript)|ensemblbacteria:SP_1177(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|refseq:WP_000146947.1|interpro:IPR000032(Phosphotransferase system, phosphocarrier HPr protein)|interpro:IPR001020(Phosphotransferase system, HPr histidine phosphorylation site)|interpro:IPR002114(Phosphotransferase system, HPr serine phosphorylation site)|uniprotkb:Q97QM6(uniprot-removed-ac)|interpro:IPR035895 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Rgygn44nRerB7nsTe3XWEFB5LaY170187 rogid:TdFQwdSSuKk+GO74wtU8lVmBIJI170187 intact-crc:86AC615E21C21D22|rigid:DmFRYSiClrW8r+ZZ//7/PhUj9jM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97RX2 uniprotkb:P65755 intact:EBI-6474872|ensemblbacteria:AAK74808 intact:EBI-6474875|ensemblbacteria:AAK75622|uniprotkb:Q97PR8 psi-mi:y663_strpn(display_long)|uniprotkb:SP_0663(locus name) psi-mi:ppac_strpn(display_long)|uniprotkb:Pyrophosphate phospho-hydrolase(gene name synonym)|uniprotkb:SP_1534(locus name)|uniprotkb:ppaC(gene name)|psi-mi:ppaC(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474880|imex:IM-18537-214 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74808(transcript)|ensemblbacteria:SP_0663(gene)|interpro:IPR006340(Conserved hypothetical protein CHP01440)|refseq:WP_001006361.1|interpro:IPR028345 interpro:IPR038763|ensemblbacteria:AAK75622(transcript)|ensemblbacteria:SP_1534(gene)|go:"GO:0004427"(inorganic diphosphatase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0030145"(manganese ion binding)|interpro:IPR001667(Phosphoesterase, RecJ-like)|interpro:IPR004097(DHHA2)|interpro:IPR022934|refseq:WP_000036043.1|interpro:IPR038222 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:79s4E8XOGpkEiCXUFbqO7J894sY170187 rogid:H6z8aEmxWNog+++fxN7cj6tdAig170187 intact-crc:596B1E7D81E5607E|rigid:ZQSIXYE20LKKjtneJFPbMfuUHbo false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP25 uniprotkb:A0A0H2UQL5 intact:EBI-6474265|ensemblbacteria:AAK74800 intact:EBI-6474268|ensemblbacteria:AAK75525 psi-mi:a0a0h2up25_strpn(display_long)|uniprotkb:SP_0655(locus name) psi-mi:a0a0h2uql5_strpn(display_long)|uniprotkb:SP_1428(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474891|imex:IM-18537-215 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74800(transcript)|ensemblbacteria:SP_0655(gene)|go:"GO:0006814"(sodium ion transport)|go:"GO:0015299"("solute:proton antiporter activity")|go:"GO:0016021"(integral component of membrane)|refseq:WP_000421646.1|interpro:IPR006153(Sodium/hydrogen exchanger)|interpro:IPR018422|uniprotkb:Q97RX8(uniprot-removed-ac) ensemblbacteria:AAK75525(transcript)|ensemblbacteria:SP_1428(gene)|go:"GO:0008270"(zinc ion binding)|interpro:IPR008913(Zinc finger, CHY-type)|interpro:IPR016694(Uncharacterised conserved protein UCP017292, zinc finger, CHY-type)|uniprotkb:Q97Q05(uniprot-removed-ac)|interpro:IPR037274 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:NYSLyMlRn5m+oJLgen4u51jON2M170187 rogid:8s4HempZ0vJXnusye/bf6V9apLk170187 intact-crc:E4BE1525941B8327|rigid:2QOQy1o0IpQBmhGsFSCIFWIC7Yc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP89 uniprotkb:A0A0H2URQ2 intact:EBI-6473554|ensemblbacteria:AAK74797 intact:EBI-6473548|ensemblbacteria:AAK76054 psi-mi:a0a0h2up89_strpn(display_long)|uniprotkb:SP_0652(locus name) psi-mi:a0a0h2urq2_strpn(display_long)|uniprotkb:SP_1987(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474902|imex:IM-18537-216 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74797(transcript)|ensemblbacteria:SP_0652(gene)|refseq:WP_000828430.1|interpro:IPR010719(Putative rRNA methylase)|interpro:IPR029063|uniprotkb:Q97RY1(uniprot-removed-ac) ensemblbacteria:AAK76054(transcript)|ensemblbacteria:SP_1987(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0042626"(ATPase-coupled transmembrane transporter activity)|refseq:WP_000565531.1|interpro:IPR003439(ABC transporter-like)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR017871|interpro:IPR019895|interpro:IPR027417|uniprotkb:Q97NN3(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:Z+eMVyw4uX/sN0xzz3xKJwpaJZI170187 rogid:ZK+YxRxxMqwXGlRm+aBG5Ogx5YU170187 intact-crc:1295A50C089B2FF8|rigid:RcsEotpJlmb2Q4LooMElfVvabYc false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQI3 uniprotkb:A0A0H2UP74 intact:EBI-6474362|ensemblbacteria:AAK75388 intact:EBI-6474356|ensemblbacteria:AAK74780 psi-mi:a0a0h2uqi3_strpn(display_long)|uniprotkb:SP_1284(locus name)|uniprotkb:lemA(gene name)|psi-mi:lemA(display_short) psi-mi:a0a0h2up74_strpn(display_long)|uniprotkb:SP_0629(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474913|imex:IM-18537-217 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75388(transcript)|ensemblbacteria:SP_1284(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000219823.1|interpro:IPR007156(LemA)|interpro:IPR023353|uniprotkb:Q97QD5(uniprot-removed-ac) ensemblbacteria:AAK74780(transcript)|ensemblbacteria:SP_0629(gene)|go:"GO:0008233"(peptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_000747771.1|interpro:IPR003709(Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins)|interpro:IPR009045(Hedgehog/DD-peptidase, zinc-binding motif)|rcsb pdb:4NT9|uniprotkb:Q97RZ7(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:+9C/UJSZReLZP5yV621MEfEUpew170187 rogid:ty7clGG0YRNHPutrDznjWwE2H+Y170187 intact-crc:426D66D9A30D2E29|rigid:QUYVRRc6ZoSiWScOTaJuWqkT/Tk false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQX6 uniprotkb:A0A0H2UP05 intact:EBI-6473976|ensemblbacteria:AAK75692 intact:EBI-6473979|ensemblbacteria:AAK74778 psi-mi:a0a0h2uqx6_strpn(display_long)|uniprotkb:SP_1608(locus name) psi-mi:a0a0h2up05_strpn(display_long)|uniprotkb:SP_0627(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474935|imex:IM-18537-219 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75692(transcript)|ensemblbacteria:SP_1608(gene)|go:"GO:0016491"(oxidoreductase activity)|refseq:WP_000754663.1|interpro:IPR006076(FAD dependent oxidoreductase)|uniprotkb:Q97PK1(uniprot-removed-ac)|interpro:IPR036188 ensemblbacteria:AAK74778(transcript)|ensemblbacteria:SP_0627(gene)|go:"GO:0004177"(aminopeptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_001077206.1|interpro:IPR008007(Peptidase M42)|uniprotkb:Q97RZ9(uniprot-removed-ac)|interpro:IPR023367 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:eyd9MsThund0o/qqXJNa8jEs9Ss170187 rogid:YLqT3T/9ApUVJ0Xu0zwAqgiEigI170187 intact-crc:3E80EC799CD32039|rigid:s+r2NTwzutN43peUT15sTM//0DM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UP74 uniprotkb:A0A0H2UQI3 intact:EBI-6474356|ensemblbacteria:AAK74780 intact:EBI-6474362|ensemblbacteria:AAK75388 psi-mi:a0a0h2up74_strpn(display_long)|uniprotkb:SP_0629(locus name) psi-mi:a0a0h2uqi3_strpn(display_long)|uniprotkb:SP_1284(locus name)|uniprotkb:lemA(gene name)|psi-mi:lemA(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474924|imex:IM-18537-218 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74780(transcript)|ensemblbacteria:SP_0629(gene)|go:"GO:0008233"(peptidase activity)|go:"GO:0046872"(metal ion binding)|refseq:WP_000747771.1|interpro:IPR003709(Peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins)|interpro:IPR009045(Hedgehog/DD-peptidase, zinc-binding motif)|rcsb pdb:4NT9|uniprotkb:Q97RZ7(uniprot-removed-ac) ensemblbacteria:AAK75388(transcript)|ensemblbacteria:SP_1284(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000219823.1|interpro:IPR007156(LemA)|interpro:IPR023353|uniprotkb:Q97QD5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ty7clGG0YRNHPutrDznjWwE2H+Y170187 rogid:+9C/UJSZReLZP5yV621MEfEUpew170187 intact-crc:FF9F8262E7B2B55D|rigid:QUYVRRc6ZoSiWScOTaJuWqkT/Tk false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNY0 uniprotkb:A0A0H2UMT9 intact:EBI-6474949|ensemblbacteria:AAK74745 intact:EBI-6474953|ensemblbacteria:AAK74237 psi-mi:a0a0h2uny0_strpn(display_long)|uniprotkb:mrnC(gene name)|psi-mi:mrnC(display_short)|uniprotkb:Mini-RNase III(gene name synonym)|uniprotkb:SP_0592(locus name) psi-mi:a0a0h2umt9_strpn(display_long)|uniprotkb:purN(gene name)|psi-mi:purN(display_short)|uniprotkb:5'-phosphoribosylglycinamide transformylase(gene name synonym)|uniprotkb:GAR transformylase(gene name synonym)|uniprotkb:SP_0048(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474946|imex:IM-18537-220 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74745(transcript)|ensemblbacteria:SP_0592(gene)|go:"GO:0004525"(ribonuclease III activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|refseq:WP_000567914.1|interpro:IPR000999(Ribonuclease III)|interpro:IPR008226(Uncharacterised conserved protein UCP005520)|uniprotkb:Q97S24(uniprot-removed-ac)|interpro:IPR036389 ensemblbacteria:AAK74237(transcript)|ensemblbacteria:SP_0048(gene)|go:"GO:0004644"(phosphoribosylglycinamide formyltransferase activity)|go:"GO:0006189"('de novo' IMP biosynthetic process)|refseq:WP_000717501.1|interpro:IPR002376(Formyl transferase, N-terminal)|interpro:IPR004607(Phosphoribosylglycinamide formyltransferase)|uniprotkb:Q97TA1(uniprot-removed-ac)|interpro:IPR036477 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:5LCAnqWFp7dN6jM9IR2Um3L7hVU170187 rogid:6JWLHR1U6fhhTJa9VQhnfCqgA6o170187 intact-crc:6631F2AC18991D50|rigid:65r7qSsGCRm2TgYCUWGwe4+aqec false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMT9 uniprotkb:A0A0H2UNY0 intact:EBI-6474953|ensemblbacteria:AAK74237 intact:EBI-6474949|ensemblbacteria:AAK74745 psi-mi:a0a0h2umt9_strpn(display_long)|uniprotkb:purN(gene name)|psi-mi:purN(display_short)|uniprotkb:5'-phosphoribosylglycinamide transformylase(gene name synonym)|uniprotkb:GAR transformylase(gene name synonym)|uniprotkb:SP_0048(locus name) psi-mi:a0a0h2uny0_strpn(display_long)|uniprotkb:mrnC(gene name)|psi-mi:mrnC(display_short)|uniprotkb:Mini-RNase III(gene name synonym)|uniprotkb:SP_0592(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474965|imex:IM-18537-221 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74237(transcript)|ensemblbacteria:SP_0048(gene)|go:"GO:0004644"(phosphoribosylglycinamide formyltransferase activity)|go:"GO:0006189"('de novo' IMP biosynthetic process)|refseq:WP_000717501.1|interpro:IPR002376(Formyl transferase, N-terminal)|interpro:IPR004607(Phosphoribosylglycinamide formyltransferase)|uniprotkb:Q97TA1(uniprot-removed-ac)|interpro:IPR036477 ensemblbacteria:AAK74745(transcript)|ensemblbacteria:SP_0592(gene)|go:"GO:0004525"(ribonuclease III activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|refseq:WP_000567914.1|interpro:IPR000999(Ribonuclease III)|interpro:IPR008226(Uncharacterised conserved protein UCP005520)|uniprotkb:Q97S24(uniprot-removed-ac)|interpro:IPR036389 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:6JWLHR1U6fhhTJa9VQhnfCqgA6o170187 rogid:5LCAnqWFp7dN6jM9IR2Um3L7hVU170187 intact-crc:DBC316175C268624|rigid:65r7qSsGCRm2TgYCUWGwe4+aqec false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNW4 uniprotkb:A0A0H2UNG3 intact:EBI-6474982|ensemblbacteria:AAK74719 intact:EBI-6474976|ensemblbacteria:AAK74541 psi-mi:a0a0h2unw4_strpn(display_long)|uniprotkb:SP_0563(locus name) psi-mi:a0a0h2ung3_strpn(display_long)|uniprotkb:mapZ(gene name)|psi-mi:mapZ(display_short)|uniprotkb:SP_0374(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474979|imex:IM-18537-222 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74719(transcript)|ensemblbacteria:SP_0563(gene)|refseq:WP_000119708.1|interpro:IPR015026(Protein of unknown function DUF1912)|uniprotkb:Q97S50(uniprot-removed-ac)|interpro:IPR038024 ensemblbacteria:AAK74541(transcript)|ensemblbacteria:SP_0374(gene)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|refseq:WP_000039291.1|interpro:IPR030858|interpro:IPR040532|uniprotkb:Q97SI7(uniprot-removed-ac)|interpro:IPR041295 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:SJVp4j/A0B96zvyIyNMqdFyCvJ0170187 rogid:ieYtEiZSMV/FNVCCtuHKSTsFoPw170187 intact-crc:7FEC7670B1FBCEE9|rigid:30B5mIJNiGwWjaD3fVdOHb3W8tA false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNW4 uniprotkb:A0A0H2UNG3 intact:EBI-6474982|ensemblbacteria:AAK74719 intact:EBI-6474976|ensemblbacteria:AAK74541 psi-mi:a0a0h2unw4_strpn(display_long)|uniprotkb:SP_0563(locus name) psi-mi:a0a0h2ung3_strpn(display_long)|uniprotkb:mapZ(gene name)|psi-mi:mapZ(display_short)|uniprotkb:SP_0374(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6474993|imex:IM-18537-223 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74719(transcript)|ensemblbacteria:SP_0563(gene)|refseq:WP_000119708.1|interpro:IPR015026(Protein of unknown function DUF1912)|uniprotkb:Q97S50(uniprot-removed-ac)|interpro:IPR038024 ensemblbacteria:AAK74541(transcript)|ensemblbacteria:SP_0374(gene)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|refseq:WP_000039291.1|interpro:IPR030858|interpro:IPR040532|uniprotkb:Q97SI7(uniprot-removed-ac)|interpro:IPR041295 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:SJVp4j/A0B96zvyIyNMqdFyCvJ0170187 rogid:ieYtEiZSMV/FNVCCtuHKSTsFoPw170187 intact-crc:C21E92CBF544559D|rigid:30B5mIJNiGwWjaD3fVdOHb3W8tA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQB7 uniprotkb:A0A0H2UNW3 intact:EBI-6473317|ensemblbacteria:AAK75384 intact:EBI-6474374|ensemblbacteria:AAK74718 psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:a0a0h2unw3_strpn(display_long)|uniprotkb:SP_0562(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475004|imex:IM-18537-224 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 ensemblbacteria:AAK74718(transcript)|ensemblbacteria:SP_0562(gene)|refseq:WP_000129090.1|interpro:IPR000014(PAS)|interpro:IPR007380(Protein of unknown function DUF438)|interpro:IPR012312(Hemerythrin/HHE cation-binding motif)|uniprotkb:Q97S51(uniprot-removed-ac)|interpro:IPR035965 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 rogid:JVPB3J3xZtBx5BAKZs4UWODjfME170187 intact-crc:22B0AE370B888412|rigid:ayq4sX814sd/+L6pdGxEpZEi98Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNW3 uniprotkb:A0A0H2UQB7 intact:EBI-6474374|ensemblbacteria:AAK74718 intact:EBI-6473317|ensemblbacteria:AAK75384 psi-mi:a0a0h2unw3_strpn(display_long)|uniprotkb:SP_0562(locus name) psi-mi:a0a0h2uqb7_strpn(display_long)|uniprotkb:SP_1280(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475015|imex:IM-18537-225 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74718(transcript)|ensemblbacteria:SP_0562(gene)|refseq:WP_000129090.1|interpro:IPR000014(PAS)|interpro:IPR007380(Protein of unknown function DUF438)|interpro:IPR012312(Hemerythrin/HHE cation-binding motif)|uniprotkb:Q97S51(uniprot-removed-ac)|interpro:IPR035965 ensemblbacteria:AAK75384(transcript)|ensemblbacteria:SP_1280(gene)|interpro:IPR003772(Protein of unknown function DUF177)|uniprotkb:Q97QD9(uniprot-removed-ac)|refseq:WP_000773233.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:JVPB3J3xZtBx5BAKZs4UWODjfME170187 rogid:AuRvAgRejWTcBFtWmx3cmcusxdk170187 intact-crc:9F424A8C4F371F66|rigid:ayq4sX814sd/+L6pdGxEpZEi98Q false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQD6 uniprotkb:A0A0H2UNW5 intact:EBI-6475032|ensemblbacteria:AAK75338 intact:EBI-6475029|ensemblbacteria:AAK74717 psi-mi:a0a0h2uqd6_strpn(display_long)|uniprotkb:SP_1232(locus name) psi-mi:a0a0h2unw5_strpn(display_long)|uniprotkb:SP_0561(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475026|imex:IM-18537-226 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75338(transcript)|ensemblbacteria:SP_1232(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022857"(transmembrane transporter activity)|refseq:WP_000747408.1|interpro:IPR024529|uniprotkb:Q97QH9(uniprot-removed-ac) ensemblbacteria:AAK74717(transcript)|ensemblbacteria:SP_0561(gene)|interpro:IPR015077(Region of unknown function DUF1858)|uniprotkb:Q97S52(uniprot-removed-ac)|interpro:IPR038062 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:11LB7efFBzHsC/RpMXWxPuyerp0170187 rogid:nSvnBpiFg97EWEzQFECmEn6b+Jk170187 intact-crc:5CF5BEF98FDA32FA|rigid:RhTjcb1UF2IIuz1ULD6Wdqtyim8 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNC2 uniprotkb:A0A0H2UNU9 intact:EBI-6475057|ensemblbacteria:AAK74482 intact:EBI-6475054|ensemblbacteria:AAK74658 psi-mi:a0a0h2unc2_strpn(display_long)|uniprotkb:SP_0305(locus name) psi-mi:a0a0h2unu9_strpn(display_long)|uniprotkb:SP_0500(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475060|imex:IM-18537-228 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74482(transcript)|ensemblbacteria:SP_0305(gene)|go:"GO:0008982"("protein-N(PI)-phosphohistidine-sugar phosphotransferase activity")|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|go:"GO:0016301"(kinase activity)|refseq:WP_001029637.1|interpro:IPR003501(Phosphotransferase system, lactose/cellobiose-specific IIB subunit)|interpro:IPR013012(Phosphotransferase system, EIIB component, type 3)|uniprotkb:Q97SM5(uniprot-removed-ac)|interpro:IPR036095 ensemblbacteria:AAK74658(transcript)|ensemblbacteria:SP_0500(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000119900.1|interpro:IPR010343(Protein of unknown function DUF939, bacterial)|uniprotkb:Q97S88(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:aO8MphyrsRCMo+ZTZby+ivze2BQ170187 rogid:PhFzJx1jYgRB6zf0NS1Fd88oMWw170187 intact-crc:43727A9C7B071B76|rigid:vBGcJvdchB8tMQHj7SAspIcn9vw false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQD6 uniprotkb:A0A0H2UNW5 intact:EBI-6475032|ensemblbacteria:AAK75338 intact:EBI-6475029|ensemblbacteria:AAK74717 psi-mi:a0a0h2uqd6_strpn(display_long)|uniprotkb:SP_1232(locus name) psi-mi:a0a0h2unw5_strpn(display_long)|uniprotkb:SP_0561(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475043|imex:IM-18537-227 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75338(transcript)|ensemblbacteria:SP_1232(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022857"(transmembrane transporter activity)|refseq:WP_000747408.1|interpro:IPR024529|uniprotkb:Q97QH9(uniprot-removed-ac) ensemblbacteria:AAK74717(transcript)|ensemblbacteria:SP_0561(gene)|interpro:IPR015077(Region of unknown function DUF1858)|uniprotkb:Q97S52(uniprot-removed-ac)|interpro:IPR038062 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:11LB7efFBzHsC/RpMXWxPuyerp0170187 rogid:nSvnBpiFg97EWEzQFECmEn6b+Jk170187 intact-crc:E1075A42CB65A98E|rigid:RhTjcb1UF2IIuz1ULD6Wdqtyim8 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNC2 uniprotkb:A0A0H2UNU9 intact:EBI-6475057|ensemblbacteria:AAK74482 intact:EBI-6475054|ensemblbacteria:AAK74658 psi-mi:a0a0h2unc2_strpn(display_long)|uniprotkb:SP_0305(locus name) psi-mi:a0a0h2unu9_strpn(display_long)|uniprotkb:SP_0500(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475071|imex:IM-18537-229 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74482(transcript)|ensemblbacteria:SP_0305(gene)|go:"GO:0008982"("protein-N(PI)-phosphohistidine-sugar phosphotransferase activity")|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|go:"GO:0016301"(kinase activity)|refseq:WP_001029637.1|interpro:IPR003501(Phosphotransferase system, lactose/cellobiose-specific IIB subunit)|interpro:IPR013012(Phosphotransferase system, EIIB component, type 3)|uniprotkb:Q97SM5(uniprot-removed-ac)|interpro:IPR036095 ensemblbacteria:AAK74658(transcript)|ensemblbacteria:SP_0500(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000119900.1|interpro:IPR010343(Protein of unknown function DUF939, bacterial)|uniprotkb:Q97S88(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:aO8MphyrsRCMo+ZTZby+ivze2BQ170187 rogid:PhFzJx1jYgRB6zf0NS1Fd88oMWw170187 intact-crc:FE809E273FB88002|rigid:vBGcJvdchB8tMQHj7SAspIcn9vw false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SA4 uniprotkb:Q97RW5 intact:EBI-6474861|ensemblbacteria:AAK74641 intact:EBI-6474857|ensemblbacteria:AAK74816 psi-mi:y482_strpn(display_long)|uniprotkb:SP_0482(locus name) psi-mi:miaa_strpn(display_long)|uniprotkb:"Dimethylallyl diphosphate:tRNA dimethylallyltransferase"(gene name synonym)|uniprotkb:"Isopentenyl-diphosphate:tRNA isopentenyltransferase"(gene name synonym)|uniprotkb:SP_0671(locus name)|uniprotkb:miaA(gene name)|psi-mi:miaA(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475082|imex:IM-18537-230 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74641(transcript)|ensemblbacteria:SP_0482(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009825(Protein of unknown function DUF1393)|interpro:IPR022914|refseq:WP_000403169.1 interpro:IPR039657|ensemblbacteria:AAK74816(transcript)|ensemblbacteria:SP_0671(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0008033"(tRNA processing)|go:"GO:0052381"(tRNA dimethylallyltransferase activity)|interpro:IPR018022|interpro:IPR027417|refseq:WP_000850193.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:m44+Qqp+1n1aq4JELO/kwmJFI/E170187 rogid:tLcJuLup0RxEUbWs5FIZdn4u4cw170187 intact-crc:65014673A9BCDA22|rigid:Az4hi9ulMp14hvSdj4kEq49JN8I false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97RW5 uniprotkb:Q97SA4 intact:EBI-6474857|ensemblbacteria:AAK74816 intact:EBI-6474861|ensemblbacteria:AAK74641 psi-mi:miaa_strpn(display_long)|uniprotkb:"Dimethylallyl diphosphate:tRNA dimethylallyltransferase"(gene name synonym)|uniprotkb:"Isopentenyl-diphosphate:tRNA isopentenyltransferase"(gene name synonym)|uniprotkb:SP_0671(locus name)|uniprotkb:miaA(gene name)|psi-mi:miaA(display_short) psi-mi:y482_strpn(display_long)|uniprotkb:SP_0482(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475093|imex:IM-18537-231 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR039657|ensemblbacteria:AAK74816(transcript)|ensemblbacteria:SP_0671(gene)|go:"GO:0005524"(ATP binding)|go:"GO:0008033"(tRNA processing)|go:"GO:0052381"(tRNA dimethylallyltransferase activity)|interpro:IPR018022|interpro:IPR027417|refseq:WP_000850193.1 ensemblbacteria:AAK74641(transcript)|ensemblbacteria:SP_0482(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009825(Protein of unknown function DUF1393)|interpro:IPR022914|refseq:WP_000403169.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tLcJuLup0RxEUbWs5FIZdn4u4cw170187 rogid:m44+Qqp+1n1aq4JELO/kwmJFI/E170187 intact-crc:D8F3A2C8ED034156|rigid:Az4hi9ulMp14hvSdj4kEq49JN8I false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMW1 uniprotkb:A0A0H2UNM1 intact:EBI-6475104|ensemblbacteria:AAK74223 intact:EBI-6475110|ensemblbacteria:AAK74620 psi-mi:a0a0h2umw1_strpn(display_long)|uniprotkb:SP_0033(locus name) psi-mi:a0a0h2unm1_strpn(display_long)|uniprotkb:SP_0460(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475107|imex:IM-18537-232 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74223(transcript)|ensemblbacteria:SP_0033(gene)|refseq:WP_000076479.1|interpro:IPR003781(CoA-binding)|uniprotkb:Q97TB0(uniprot-removed-ac)|interpro:IPR036291 ensemblbacteria:AAK74620(transcript)|ensemblbacteria:SP_0460(gene)|refseq:WP_000400087.1|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97SC5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:siUp9tjMrxi+yk/+G3iwGe+Ybe4170187 rogid:wAbSuG+ciWEYTHwAkck3rMZke9I170187 intact-crc:607D866E3865B92E|rigid:And9JIEe+U2IkrY+6Q/897lCDe8 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNS2 uniprotkb:Q97PM1 intact:EBI-6474029|ensemblbacteria:AAK74604 intact:EBI-6474032|ensemblbacteria:AAK75670 psi-mi:a0a0h2uns2_strpn(display_long)|uniprotkb:SP_0443(locus name) psi-mi:cody_strpn(display_long)|uniprotkb:SP_1584(locus name)|uniprotkb:codY(gene name)|psi-mi:codY(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475132|imex:IM-18537-234 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74604(transcript)|ensemblbacteria:SP_0443(gene)|go:"GO:0004371"(glycerone kinase activity)|go:"GO:0006071"(glycerol metabolic process)|refseq:WP_000036661.1|interpro:IPR004007(Dak phosphatase)|interpro:IPR019986|interpro:IPR033470|uniprotkb:Q97SE1(uniprot-removed-ac)|interpro:IPR036117 ensemblbacteria:AAK75670(transcript)|ensemblbacteria:SP_1584(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005525"(GTP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|interpro:IPR029016|refseq:WP_000940729.1|interpro:IPR010312(GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal)|interpro:IPR011991(Winged helix repressor DNA-binding)|interpro:IPR013198(GTP-sensing helix-turn-helix, CodY, C-terminal)|interpro:IPR014154(GTP-sensing transcriptional pleiotropic repressor CodY)|interpro:IPR036388|interpro:IPR036390 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:l5HgfEYEsiYVBfQz+GfLHdN5GCQ170187 rogid:Dpg3bSduHDJ+6SMMaJbKV0J4yow170187 intact-crc:3F2CB8A5E828CD46|rigid:CAVaSJRMnUzK8nneJKmUS4UjsxE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMW1 uniprotkb:A0A0H2UNM1 intact:EBI-6475104|ensemblbacteria:AAK74223 intact:EBI-6475110|ensemblbacteria:AAK74620 psi-mi:a0a0h2umw1_strpn(display_long)|uniprotkb:SP_0033(locus name) psi-mi:a0a0h2unm1_strpn(display_long)|uniprotkb:SP_0460(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475121|imex:IM-18537-233 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74223(transcript)|ensemblbacteria:SP_0033(gene)|refseq:WP_000076479.1|interpro:IPR003781(CoA-binding)|uniprotkb:Q97TB0(uniprot-removed-ac)|interpro:IPR036291 ensemblbacteria:AAK74620(transcript)|ensemblbacteria:SP_0460(gene)|refseq:WP_000400087.1|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97SC5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:siUp9tjMrxi+yk/+G3iwGe+Ybe4170187 rogid:wAbSuG+ciWEYTHwAkck3rMZke9I170187 intact-crc:DD8F62D57CDA225A|rigid:And9JIEe+U2IkrY+6Q/897lCDe8 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US22 uniprotkb:A0A0H2UNK7 intact:EBI-6473503|ensemblbacteria:AAK76112 intact:EBI-6473509|ensemblbacteria:AAK74596 psi-mi:a0a0h2us22_strpn(display_long)|uniprotkb:SP_2048(locus name) psi-mi:a0a0h2unk7_strpn(display_long)|uniprotkb:SP_0434(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475154|imex:IM-18537-236 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76112(transcript)|ensemblbacteria:SP_2048(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000250534.1|interpro:IPR016977(Competence protein ComGF)|uniprotkb:Q97NI0(uniprot-removed-ac) ensemblbacteria:AAK74596(transcript)|ensemblbacteria:SP_0434(gene)|refseq:WP_000510591.1|interpro:IPR005531(Protein of unknown function DUF322)|uniprotkb:Q97SE9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jrMnAggqBZKvSezCGr/UY2oeoXc170187 rogid:MlVqPN+ISxXzAsd/kLnJpGpTBZI170187 intact-crc:366C578CB2E4605D|rigid:8neyXHaED9N+hARh+TMeUHtvHUQ false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2US22 uniprotkb:A0A0H2UNK7 intact:EBI-6473503|ensemblbacteria:AAK76112 intact:EBI-6473509|ensemblbacteria:AAK74596 psi-mi:a0a0h2us22_strpn(display_long)|uniprotkb:SP_2048(locus name) psi-mi:a0a0h2unk7_strpn(display_long)|uniprotkb:SP_0434(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475143|imex:IM-18537-235 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76112(transcript)|ensemblbacteria:SP_2048(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000250534.1|interpro:IPR016977(Competence protein ComGF)|uniprotkb:Q97NI0(uniprot-removed-ac) ensemblbacteria:AAK74596(transcript)|ensemblbacteria:SP_0434(gene)|refseq:WP_000510591.1|interpro:IPR005531(Protein of unknown function DUF322)|uniprotkb:Q97SE9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jrMnAggqBZKvSezCGr/UY2oeoXc170187 rogid:MlVqPN+ISxXzAsd/kLnJpGpTBZI170187 intact-crc:8B9EB337F65BFB29|rigid:8neyXHaED9N+hARh+TMeUHtvHUQ false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97TA2 uniprotkb:A0A0H2UNI9 intact:EBI-6475165|ensemblbacteria:AAK74236 intact:EBI-6475169|ensemblbacteria:AAK74575 psi-mi:pur5_strpn(display_long)|uniprotkb:AIR synthase(gene name synonym)|uniprotkb:AIRS(gene name synonym)|uniprotkb:Phosphoribosyl-aminoimidazole synthetase(gene name synonym)|uniprotkb:SP_0047(locus name)|uniprotkb:purM(gene name)|psi-mi:purM(display_short) psi-mi:a0a0h2uni9_strpn(display_long)|uniprotkb:SP_0412(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475172|imex:IM-18537-237 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74236(transcript)|ensemblbacteria:SP_0047(gene)|go:"GO:0004641"(phosphoribosylformylglycinamidine cyclo-ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006189"('de novo' IMP biosynthetic process)|interpro:IPR004733(Phosphoribosylformylglycinamidine cyclo-ligase)|interpro:IPR010918(AIR synthase related protein, C-terminal)|interpro:IPR016188(PurM, N-terminal-like)|refseq:WP_001284589.1|interpro:IPR036676|interpro:IPR036921 ensemblbacteria:AAK74575(transcript)|ensemblbacteria:SP_0412(gene)|refseq:WP_000079358.1|interpro:IPR010360(Protein of unknown function DUF956)|uniprotkb:Q97SF9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UJsHNtkBF9CBmKVIsTfBpGUXlrg170187 rogid:E8fQ3XSE3GEm9K2FaSV/qiTMpIE170187 intact-crc:E8713A629CC828D5|rigid:UEs8zQdT/IabfoURl5Kj2upGMEs false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNI9 uniprotkb:Q97TA2 intact:EBI-6475169|ensemblbacteria:AAK74575 intact:EBI-6475165|ensemblbacteria:AAK74236 psi-mi:a0a0h2uni9_strpn(display_long)|uniprotkb:SP_0412(locus name) psi-mi:pur5_strpn(display_long)|uniprotkb:AIR synthase(gene name synonym)|uniprotkb:AIRS(gene name synonym)|uniprotkb:Phosphoribosyl-aminoimidazole synthetase(gene name synonym)|uniprotkb:SP_0047(locus name)|uniprotkb:purM(gene name)|psi-mi:purM(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475183|imex:IM-18537-238 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74575(transcript)|ensemblbacteria:SP_0412(gene)|refseq:WP_000079358.1|interpro:IPR010360(Protein of unknown function DUF956)|uniprotkb:Q97SF9(uniprot-removed-ac) ensemblbacteria:AAK74236(transcript)|ensemblbacteria:SP_0047(gene)|go:"GO:0004641"(phosphoribosylformylglycinamidine cyclo-ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006189"('de novo' IMP biosynthetic process)|interpro:IPR004733(Phosphoribosylformylglycinamidine cyclo-ligase)|interpro:IPR010918(AIR synthase related protein, C-terminal)|interpro:IPR016188(PurM, N-terminal-like)|refseq:WP_001284589.1|interpro:IPR036676|interpro:IPR036921 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:E8fQ3XSE3GEm9K2FaSV/qiTMpIE170187 rogid:UJsHNtkBF9CBmKVIsTfBpGUXlrg170187 intact-crc:5583DED9D877B3A1|rigid:UEs8zQdT/IabfoURl5Kj2upGMEs false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URR7 uniprotkb:A0A0H2UNJ6 intact:EBI-6473534|ensemblbacteria:AAK76075 intact:EBI-6473531|ensemblbacteria:AAK74572 psi-mi:a0a0h2urr7_strpn(display_long)|uniprotkb:SP_2008(locus name) psi-mi:a0a0h2unj6_strpn(display_long)|uniprotkb:SP_0409(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475194|imex:IM-18537-239 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76075(transcript)|ensemblbacteria:SP_2008(gene)|go:"GO:0006605"(protein targeting)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001210991.1|interpro:IPR001901(Protein secE/sec61-gamma protein)|interpro:IPR005807(SecE subunit of protein translocation complex)|interpro:IPR038379|uniprotkb:Q97NL5(uniprot-removed-ac) ensemblbacteria:AAK74572(transcript)|ensemblbacteria:SP_0409(gene)|go:"GO:0051920"(peroxiredoxin activity)|refseq:WP_000206761.1|interpro:IPR003779(Carboxymuconolactone decarboxylase)|interpro:IPR004675(Alkylhydroperoxidase AhpD core)|interpro:IPR029032|uniprotkb:Q97SG2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:y6HMZbFjVcyoUrrG3Mqky2TVpdQ170187 rogid:kvFpxL+7bVFbFOM76jAW4aXbxk0170187 intact-crc:2E9462BDE77CA4B5|rigid:hgSJGqcpAX9RKj/ct6aUd8s/+BE false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URR7 uniprotkb:A0A0H2UNJ6 intact:EBI-6473534|ensemblbacteria:AAK76075 intact:EBI-6473531|ensemblbacteria:AAK74572 psi-mi:a0a0h2urr7_strpn(display_long)|uniprotkb:SP_2008(locus name) psi-mi:a0a0h2unj6_strpn(display_long)|uniprotkb:SP_0409(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475205|imex:IM-18537-240 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76075(transcript)|ensemblbacteria:SP_2008(gene)|go:"GO:0006605"(protein targeting)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001210991.1|interpro:IPR001901(Protein secE/sec61-gamma protein)|interpro:IPR005807(SecE subunit of protein translocation complex)|interpro:IPR038379|uniprotkb:Q97NL5(uniprot-removed-ac) ensemblbacteria:AAK74572(transcript)|ensemblbacteria:SP_0409(gene)|go:"GO:0051920"(peroxiredoxin activity)|refseq:WP_000206761.1|interpro:IPR003779(Carboxymuconolactone decarboxylase)|interpro:IPR004675(Alkylhydroperoxidase AhpD core)|interpro:IPR029032|uniprotkb:Q97SG2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:y6HMZbFjVcyoUrrG3Mqky2TVpdQ170187 rogid:kvFpxL+7bVFbFOM76jAW4aXbxk0170187 intact-crc:93668606A3C33FC1|rigid:hgSJGqcpAX9RKj/ct6aUd8s/+BE false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNG3 uniprotkb:A0A0H2UNW4 intact:EBI-6474976|ensemblbacteria:AAK74541 intact:EBI-6474982|ensemblbacteria:AAK74719 psi-mi:a0a0h2ung3_strpn(display_long)|uniprotkb:mapZ(gene name)|psi-mi:mapZ(display_short)|uniprotkb:SP_0374(locus name) psi-mi:a0a0h2unw4_strpn(display_long)|uniprotkb:SP_0563(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475227|imex:IM-18537-242 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74541(transcript)|ensemblbacteria:SP_0374(gene)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|refseq:WP_000039291.1|interpro:IPR030858|interpro:IPR040532|uniprotkb:Q97SI7(uniprot-removed-ac)|interpro:IPR041295 ensemblbacteria:AAK74719(transcript)|ensemblbacteria:SP_0563(gene)|refseq:WP_000119708.1|interpro:IPR015026(Protein of unknown function DUF1912)|uniprotkb:Q97S50(uniprot-removed-ac)|interpro:IPR038024 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:ieYtEiZSMV/FNVCCtuHKSTsFoPw170187 rogid:SJVp4j/A0B96zvyIyNMqdFyCvJ0170187 intact-crc:9776F2B8F395EE4B|rigid:30B5mIJNiGwWjaD3fVdOHb3W8tA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNW4 uniprotkb:A0A0H2UNG3 intact:EBI-6474982|ensemblbacteria:AAK74719 intact:EBI-6474976|ensemblbacteria:AAK74541 psi-mi:a0a0h2unw4_strpn(display_long)|uniprotkb:SP_0563(locus name) psi-mi:a0a0h2ung3_strpn(display_long)|uniprotkb:mapZ(gene name)|psi-mi:mapZ(display_short)|uniprotkb:SP_0374(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475216|imex:IM-18537-241 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74719(transcript)|ensemblbacteria:SP_0563(gene)|refseq:WP_000119708.1|interpro:IPR015026(Protein of unknown function DUF1912)|uniprotkb:Q97S50(uniprot-removed-ac)|interpro:IPR038024 ensemblbacteria:AAK74541(transcript)|ensemblbacteria:SP_0374(gene)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0007049"(cell cycle)|go:"GO:0051301"(cell division)|refseq:WP_000039291.1|interpro:IPR030858|interpro:IPR040532|uniprotkb:Q97SI7(uniprot-removed-ac)|interpro:IPR041295 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:SJVp4j/A0B96zvyIyNMqdFyCvJ0170187 rogid:ieYtEiZSMV/FNVCCtuHKSTsFoPw170187 intact-crc:2A841603B72A753F|rigid:30B5mIJNiGwWjaD3fVdOHb3W8tA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNG1 uniprotkb:A0A0H2UPV5 intact:EBI-6474578|ensemblbacteria:AAK74540 intact:EBI-6474581|ensemblbacteria:AAK75095 psi-mi:a0a0h2ung1_strpn(display_long)|uniprotkb:SP_0373(locus name) psi-mi:a0a0h2upv5_strpn(display_long)|uniprotkb:SP_0974(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475249|imex:IM-18537-244 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74540(transcript)|ensemblbacteria:SP_0373(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000711388.1|interpro:IPR000241(Putative RNA methylase)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR004114(THUMP)|interpro:IPR029063|uniprotkb:Q97SI8(uniprot-removed-ac) ensemblbacteria:AAK75095(transcript)|ensemblbacteria:SP_0974(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000282517.1|interpro:IPR004692(Preprotein translocase SecG subunit)|uniprotkb:Q97R58(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:gDCkKljvebgny4vsp4/P8aX0QvU170187 rogid:KOr2TXnA3XiqlTrg0ogoB398bOY170187 intact-crc:8268AC8BBDE2B9B2|rigid:Q1G+HLaEuXfzbM338tr/PADKEtM false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNG1 uniprotkb:A0A0H2UPV5 intact:EBI-6474578|ensemblbacteria:AAK74540 intact:EBI-6474581|ensemblbacteria:AAK75095 psi-mi:a0a0h2ung1_strpn(display_long)|uniprotkb:SP_0373(locus name) psi-mi:a0a0h2upv5_strpn(display_long)|uniprotkb:SP_0974(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475238|imex:IM-18537-243 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74540(transcript)|ensemblbacteria:SP_0373(gene)|go:"GO:0003723"(RNA binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000711388.1|interpro:IPR000241(Putative RNA methylase)|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR004114(THUMP)|interpro:IPR029063|uniprotkb:Q97SI8(uniprot-removed-ac) ensemblbacteria:AAK75095(transcript)|ensemblbacteria:SP_0974(gene)|go:"GO:0005886"(plasma membrane)|go:"GO:0009306"(protein secretion)|go:"GO:0015450"(protein-transporting ATPase activity)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000282517.1|interpro:IPR004692(Preprotein translocase SecG subunit)|uniprotkb:Q97R58(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:gDCkKljvebgny4vsp4/P8aX0QvU170187 rogid:KOr2TXnA3XiqlTrg0ogoB398bOY170187 intact-crc:3F9A4830F95D22C6|rigid:Q1G+HLaEuXfzbM338tr/PADKEtM false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SJ0 uniprotkb:Q54801 intact:EBI-6473258|ensemblbacteria:AAK74538 intact:EBI-6473264|ensemblbacteria:AAK75658|uniprotkb:O08440|uniprotkb:O08443|uniprotkb:Q54973|uniprotkb:O08442|uniprotkb:O08441 psi-mi:y371_strpn(display_long)|uniprotkb:SP_0371(locus name) psi-mi:dyr_strpn(display_long)|uniprotkb:dfr(gene name synonym)|uniprotkb:SP_1571(locus name)|uniprotkb:dhfR(gene name)|psi-mi:dhfR(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475260|imex:IM-18537-245 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74538(transcript)|ensemblbacteria:SP_0371(gene)|refseq:WP_000179547.1|interpro:IPR010697(Protein of unknown function DUF1273) go:"GO:0004146"(dihydrofolate reductase activity)|go:"GO:0006545"(glycine biosynthetic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050661"(NADP binding)|ensemblbacteria:AAK75658(transcript)|ensemblbacteria:SP_1571(gene)|refseq:WP_000162484.1|interpro:IPR001796(Dihydrofolate reductase region)|interpro:IPR012259(Dihydrofolate reductase)|interpro:IPR017925|interpro:IPR024072|rcsb pdb:3IX9 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:hw4QDd/4VczEPOg7fxVCWbaW+4g170187 rogid:QTOgzsCX1HBVUuCL+SnC6fhEw7E170187 intact-crc:383AB9B145521D99|rigid:qcK555B6Nk1sT8AEfbMi9uAgCEg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SJ0 uniprotkb:Q54801 intact:EBI-6473258|ensemblbacteria:AAK74538 intact:EBI-6473264|ensemblbacteria:AAK75658|uniprotkb:O08440|uniprotkb:O08443|uniprotkb:Q54973|uniprotkb:O08442|uniprotkb:O08441 psi-mi:y371_strpn(display_long)|uniprotkb:SP_0371(locus name) psi-mi:dyr_strpn(display_long)|uniprotkb:dfr(gene name synonym)|uniprotkb:SP_1571(locus name)|uniprotkb:dhfR(gene name)|psi-mi:dhfR(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475271|imex:IM-18537-246 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74538(transcript)|ensemblbacteria:SP_0371(gene)|refseq:WP_000179547.1|interpro:IPR010697(Protein of unknown function DUF1273) go:"GO:0004146"(dihydrofolate reductase activity)|go:"GO:0006545"(glycine biosynthetic process)|go:"GO:0006730"(one-carbon metabolic process)|go:"GO:0046654"(tetrahydrofolate biosynthetic process)|go:"GO:0046677"(response to antibiotic)|go:"GO:0050661"(NADP binding)|ensemblbacteria:AAK75658(transcript)|ensemblbacteria:SP_1571(gene)|refseq:WP_000162484.1|interpro:IPR001796(Dihydrofolate reductase region)|interpro:IPR012259(Dihydrofolate reductase)|interpro:IPR017925|interpro:IPR024072|rcsb pdb:3IX9 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:hw4QDd/4VczEPOg7fxVCWbaW+4g170187 rogid:QTOgzsCX1HBVUuCL+SnC6fhEw7E170187 intact-crc:85C85D0A01ED86ED|rigid:qcK555B6Nk1sT8AEfbMi9uAgCEg false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97T27 uniprotkb:A0A0H2UNB3 intact:EBI-6475293|ensemblbacteria:AAK74315 intact:EBI-6475300|ensemblbacteria:AAK74481 psi-mi:tsad_strpn(display_long)|uniprotkb:tsaD(gene name)|psi-mi:tsaD(display_short)|uniprotkb:gcp(gene name synonym)|uniprotkb:"t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD"(gene name synonym)|uniprotkb:tRNA threonylcarbamoyladenosine biosynthesis protein TsaD(gene name synonym)|uniprotkb:SP_0129(locus name)|uniprotkb:N6-L-threonylcarbamoyladenine synthase(gene name synonym) psi-mi:a0a0h2unb3_strpn(display_long)|uniprotkb:SP_0304(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475297|imex:IM-18537-248 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74315(transcript)|ensemblbacteria:SP_0129(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|go:"GO:0005506"(iron ion binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0061711"("N(6)-L-threonylcarbamoyladenine synthase activity")|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR017860|interpro:IPR017861|interpro:IPR022450|refseq:WP_000655045.1|interpro:IPR043129 ensemblbacteria:AAK74481(transcript)|ensemblbacteria:SP_0304(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000580382.1|interpro:IPR006603(Cystinosin/ERS1p repeat)|uniprotkb:Q97SM6(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:L/YHQP02LN5V17WSMTQHDUJwBLY170187 rogid:OMYeyKURcRcyxsVVBYfmv67crvA170187 intact-crc:503D8D38E677EA5D|rigid:2YIYm1N6XJvzTMILji7sty2yFrw false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNC2 uniprotkb:A0A0H2UNU9 intact:EBI-6475057|ensemblbacteria:AAK74482 intact:EBI-6475054|ensemblbacteria:AAK74658 psi-mi:a0a0h2unc2_strpn(display_long)|uniprotkb:SP_0305(locus name) psi-mi:a0a0h2unu9_strpn(display_long)|uniprotkb:SP_0500(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475282|imex:IM-18537-247 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74482(transcript)|ensemblbacteria:SP_0305(gene)|go:"GO:0008982"("protein-N(PI)-phosphohistidine-sugar phosphotransferase activity")|go:"GO:0009401"(phosphoenolpyruvate-dependent sugar phosphotransferase system)|go:"GO:0016301"(kinase activity)|refseq:WP_001029637.1|interpro:IPR003501(Phosphotransferase system, lactose/cellobiose-specific IIB subunit)|interpro:IPR013012(Phosphotransferase system, EIIB component, type 3)|uniprotkb:Q97SM5(uniprot-removed-ac)|interpro:IPR036095 ensemblbacteria:AAK74658(transcript)|ensemblbacteria:SP_0500(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000119900.1|interpro:IPR010343(Protein of unknown function DUF939, bacterial)|uniprotkb:Q97S88(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:aO8MphyrsRCMo+ZTZby+ivze2BQ170187 rogid:PhFzJx1jYgRB6zf0NS1Fd88oMWw170187 intact-crc:161A1AEF7DD6A0A0|rigid:vBGcJvdchB8tMQHj7SAspIcn9vw false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQ93 uniprotkb:Q97SR4 intact:EBI-6474424|ensemblbacteria:AAK75352 intact:EBI-2206983|ensemblbacteria:AAK74439 psi-mi:a0a0h2uq93_strpn(display_long)|uniprotkb:smc(gene name)|psi-mi:smc(display_short)|uniprotkb:SP_1247(locus name) psi-mi:ispt_strpn(display_long)|uniprotkb:uppS(gene name)|psi-mi:uppS(display_short)|uniprotkb:SP_0261(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475311|imex:IM-18537-249 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75352(transcript)|ensemblbacteria:SP_1247(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005694"(chromosome)|go:"GO:0005737"(cytoplasm)|go:"GO:0006260"(DNA replication)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0030261"(chromosome condensation)|refseq:WP_000280892.1|interpro:IPR003395(RecF/RecN/SMC protein, N-terminal)|interpro:IPR010935(SMCs flexible hinge)|interpro:IPR011890(Chromosome segregation protein SMC)|interpro:IPR024704|interpro:IPR027417|uniprotkb:Q97QG7(uniprot-removed-ac)|interpro:IPR036277 interpro:IPR001441(Di-trans-poly-cis-decaprenylcistransferase)|interpro:IPR018520|rcsb pdb:5KH2|rcsb pdb:5KH4|rcsb pdb:5KH5|refseq:WP_000466719.1|interpro:IPR036424|ensemblbacteria:AAK74439(transcript)|ensemblbacteria:SP_0261(gene)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0004659"(prenyltransferase activity) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UxqsAQCgoxeOZT9NkteB5VLIWC0170187 rogid:K1YVMTtfIRTOFLXlTBuvIZJGLGM170187 intact-crc:5E65AD9589DFA6C4|rigid:bLGdf916YOIKxGHBco7D1e/Fmmc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SX1 uniprotkb:A0A0H2UN86 intact:EBI-6475322|ensemblbacteria:AAK74373 intact:EBI-6475325|ensemblbacteria:AAK74438 psi-mi:y192_strpn(display_long)|uniprotkb:SP_0192(locus name) psi-mi:a0a0h2un86_strpn(display_long)|uniprotkb:SP_0260(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475328|imex:IM-18537-250 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74373(transcript)|ensemblbacteria:SP_0192(gene)|interpro:IPR009309(Protein of unknown function DUF965, bacterial)|refseq:WP_000507059.1 ensemblbacteria:AAK74438(transcript)|ensemblbacteria:SP_0260(gene)|refseq:WP_001098903.1|interpro:IPR009267(Protein of unknown function DUF925, bacterial)|rcsb pdb:2LA3|uniprotkb:Q97SR5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:pbL/CPaWZLUC3x7nAPz7ADo+yK0170187 rogid:tIUI7hlLMZXaudEZ/KJZbCaSi90170187 intact-crc:E36C469DA4E089EE|rigid:N1rswBSZ/xq5YOv+zfB3K0oECY4 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97SX1 uniprotkb:A0A0H2UN86 intact:EBI-6475322|ensemblbacteria:AAK74373 intact:EBI-6475325|ensemblbacteria:AAK74438 psi-mi:y192_strpn(display_long)|uniprotkb:SP_0192(locus name) psi-mi:a0a0h2un86_strpn(display_long)|uniprotkb:SP_0260(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475339|imex:IM-18537-251 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74373(transcript)|ensemblbacteria:SP_0192(gene)|interpro:IPR009309(Protein of unknown function DUF965, bacterial)|refseq:WP_000507059.1 ensemblbacteria:AAK74438(transcript)|ensemblbacteria:SP_0260(gene)|refseq:WP_001098903.1|interpro:IPR009267(Protein of unknown function DUF925, bacterial)|rcsb pdb:2LA3|uniprotkb:Q97SR5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:pbL/CPaWZLUC3x7nAPz7ADo+yK0170187 rogid:tIUI7hlLMZXaudEZ/KJZbCaSi90170187 intact-crc:5E9EA226E05F129A|rigid:N1rswBSZ/xq5YOv+zfB3K0oECY4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97RM5 uniprotkb:Q97ST4 intact:EBI-6475356|ensemblbacteria:AAK74916 intact:EBI-6475353|ensemblbacteria:AAK74419 psi-mi:rimm_strpn(display_long)|uniprotkb:SP_0778(locus name)|uniprotkb:rimM(gene name)|psi-mi:rimM(display_short) psi-mi:y239_strpn(display_long)|uniprotkb:SP_0239(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475350|imex:IM-18537-252 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74916(transcript)|ensemblbacteria:SP_0778(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0042274"(ribosomal small subunit biogenesis)|go:"GO:0043022"(ribosome binding)|interpro:IPR002676(RimM protein)|interpro:IPR009000(Translation elongation and initiation factors/Ribosomal, beta-barrel)|interpro:IPR011033(PRC-barrel-like)|interpro:IPR011961(16S rRNA processing protein RimM)|interpro:IPR027275|refseq:WP_001105907.1|interpro:IPR036976 ensemblbacteria:AAK74419(transcript)|ensemblbacteria:SP_0239(gene)|interpro:IPR007841(Protein of unknown function DUF711)|rcsb pdb:2HA9|refseq:WP_000354896.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:isVP/2ex39tExcQirjqoaykQVg0170187 rogid:DxNhXmIttWKzPiXG2JTmAzL+CpY170187 intact-crc:397B2009CFBA177F|rigid:RHcf8EYxKQxCy8FRjdw3GvnMOQc false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN86 uniprotkb:Q97SX1 intact:EBI-6475325|ensemblbacteria:AAK74438 intact:EBI-6475322|ensemblbacteria:AAK74373 psi-mi:a0a0h2un86_strpn(display_long)|uniprotkb:SP_0260(locus name) psi-mi:y192_strpn(display_long)|uniprotkb:SP_0192(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475368|imex:IM-18537-253 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74438(transcript)|ensemblbacteria:SP_0260(gene)|refseq:WP_001098903.1|interpro:IPR009267(Protein of unknown function DUF925, bacterial)|rcsb pdb:2LA3|uniprotkb:Q97SR5(uniprot-removed-ac) ensemblbacteria:AAK74373(transcript)|ensemblbacteria:SP_0192(gene)|interpro:IPR009309(Protein of unknown function DUF965, bacterial)|refseq:WP_000507059.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:tIUI7hlLMZXaudEZ/KJZbCaSi90170187 rogid:pbL/CPaWZLUC3x7nAPz7ADo+yK0170187 intact-crc:B60426EEA2313238|rigid:N1rswBSZ/xq5YOv+zfB3K0oECY4 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN91 uniprotkb:A0A0H2URZ0 intact:EBI-6472199|ensemblbacteria:AAK74365 intact:EBI-6472196|ensemblbacteria:AAK76067 psi-mi:a0a0h2un91_strpn(display_long)|uniprotkb:SP_0184(locus name) psi-mi:a0a0h2urz0_strpn(display_long)|uniprotkb:SP_2000(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475379|imex:IM-18537-254 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74365(transcript)|ensemblbacteria:SP_0184(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009214(Uncharacterised conserved protein UCP033111, membrane associated)|uniprotkb:Q97SX9(uniprot-removed-ac) ensemblbacteria:AAK76067(transcript)|ensemblbacteria:SP_2000(gene)|go:"GO:0000160"(phosphorelay signal transduction system)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR000792(Bacterial regulatory protein, LuxR)|interpro:IPR001789(Signal transduction response regulator, receiver region)|interpro:IPR011006(CheY-like)|interpro:IPR016032(Signal transduction response regulator, C-terminal effector)|uniprotkb:I6L8S5(uniprot-removed-ac)|refseq:WP_000866703.1|interpro:IPR036388|interpro:IPR039420 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:/46BFODW8bgC1dhws3CDEofEPPQ170187 rogid:xnNRVo9cbuKxhNupvN32Lc1J+cE170187 intact-crc:6AE410FA08B9CD42|rigid:3zewNb9XCO3bzgbkFxoZwmztmGg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2URZ0 uniprotkb:A0A0H2UN91 intact:EBI-6472196|ensemblbacteria:AAK76067 intact:EBI-6472199|ensemblbacteria:AAK74365 psi-mi:a0a0h2urz0_strpn(display_long)|uniprotkb:SP_2000(locus name) psi-mi:a0a0h2un91_strpn(display_long)|uniprotkb:SP_0184(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475390|imex:IM-18537-255 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK76067(transcript)|ensemblbacteria:SP_2000(gene)|go:"GO:0000160"(phosphorelay signal transduction system)|go:"GO:0003677"(DNA binding)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR000792(Bacterial regulatory protein, LuxR)|interpro:IPR001789(Signal transduction response regulator, receiver region)|interpro:IPR011006(CheY-like)|interpro:IPR016032(Signal transduction response regulator, C-terminal effector)|uniprotkb:I6L8S5(uniprot-removed-ac)|refseq:WP_000866703.1|interpro:IPR036388|interpro:IPR039420 ensemblbacteria:AAK74365(transcript)|ensemblbacteria:SP_0184(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009214(Uncharacterised conserved protein UCP033111, membrane associated)|uniprotkb:Q97SX9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:xnNRVo9cbuKxhNupvN32Lc1J+cE170187 rogid:/46BFODW8bgC1dhws3CDEofEPPQ170187 intact-crc:D716F4414C065636|rigid:3zewNb9XCO3bzgbkFxoZwmztmGg false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97T03 uniprotkb:A0A0H2UNE9 intact:EBI-6472210|ensemblbacteria:AAK74340 intact:EBI-6472213|ensemblbacteria:AAK74525 psi-mi:nrdil_strpn(display_long)|uniprotkb:SP_0158(locus name) psi-mi:a0a0h2une9_strpn(display_long)|uniprotkb:SP_0352(locus name)|uniprotkb:cps4G(gene name)|psi-mi:cps4G(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475412|imex:IM-18537-257 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74340(transcript)|ensemblbacteria:SP_0158(gene)|go:"GO:0006464"(cellular protein modification process)|go:"GO:0010181"(FMN binding)|refseq:WP_000849621.1|interpro:IPR004465(Ribonucleotide reductase Class Ib, NrdI)|interpro:IPR029039 ensemblbacteria:SP_0352(gene)|ensemblbacteria:AAK74525(transcript)|uniprotkb:I6L8X5(uniprot-removed-ac)|refseq:WP_001264338.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:e6bQv3wnVekK8oEGpS3BlcJBLWE170187 rogid:GdX98H5hLI/P5eX9Y8ieq02ZACY170187 intact-crc:0D5302B694DC8980|rigid:2Vz1e/4bLVwJ7ehuHt82jlrVmm8 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQZ2 uniprotkb:A0A0H2UN91 intact:EBI-6474149|ensemblbacteria:AAK75596 intact:EBI-6472199|ensemblbacteria:AAK74365 psi-mi:a0a0h2uqz2_strpn(display_long)|uniprotkb:SP_1505(locus name) psi-mi:a0a0h2un91_strpn(display_long)|uniprotkb:SP_0184(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475401|imex:IM-18537-256 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75596(transcript)|ensemblbacteria:SP_1505(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000435455.1|interpro:IPR002549(Protein of unknown function UPF0118)|uniprotkb:Q97PT9(uniprot-removed-ac) ensemblbacteria:AAK74365(transcript)|ensemblbacteria:SP_0184(gene)|go:"GO:0016021"(integral component of membrane)|interpro:IPR009214(Uncharacterised conserved protein UCP033111, membrane associated)|uniprotkb:Q97SX9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:NUFp4oyd+yaz7d3gWRSeTrTlavY170187 rogid:/46BFODW8bgC1dhws3CDEofEPPQ170187 intact-crc:1D080F5C2393B9B7|rigid:83Md3rReUE1/ZMu/EdRbZlZ8tJI false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMY4 uniprotkb:A0A0H2UN08 intact:EBI-6475423|ensemblbacteria:AAK74289 intact:EBI-6475426|ensemblbacteria:AAK74313 psi-mi:a0a0h2umy4_strpn(display_long)|uniprotkb:SP_0102(locus name) psi-mi:a0a0h2un08_strpn(display_long)|uniprotkb:SP_0127(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475429|imex:IM-18537-258 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74289(transcript)|ensemblbacteria:SP_0102(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97T53(uniprot-removed-ac) ensemblbacteria:AAK74313(transcript)|ensemblbacteria:SP_0127(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|refseq:WP_000865689.1|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR022496|uniprotkb:Q97T29(uniprot-removed-ac)|interpro:IPR043129 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jbdy1Oy89+KT5M/7tgoaB8OBZjo170187 rogid:TouiGw86kyamXO96e1XKSGayoV8170187 intact-crc:1C5BBE99871D7D85|rigid:EWMlQo/88QQs9AUDAcFj5iA2R90 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN08 uniprotkb:A0A0H2UMY4 intact:EBI-6475426|ensemblbacteria:AAK74313 intact:EBI-6475423|ensemblbacteria:AAK74289 psi-mi:a0a0h2un08_strpn(display_long)|uniprotkb:SP_0127(locus name) psi-mi:a0a0h2umy4_strpn(display_long)|uniprotkb:SP_0102(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475440|imex:IM-18537-259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74313(transcript)|ensemblbacteria:SP_0127(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|refseq:WP_000865689.1|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR022496|uniprotkb:Q97T29(uniprot-removed-ac)|interpro:IPR043129 ensemblbacteria:AAK74289(transcript)|ensemblbacteria:SP_0102(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97T53(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:TouiGw86kyamXO96e1XKSGayoV8170187 rogid:jbdy1Oy89+KT5M/7tgoaB8OBZjo170187 intact-crc:A1A95A22C3A2E6F1|rigid:EWMlQo/88QQs9AUDAcFj5iA2R90 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97T34 uniprotkb:A0A0H2UN16 intact:EBI-6475457|ensemblbacteria:AAK74308 intact:EBI-6475454|ensemblbacteria:AAK74286 psi-mi:rpoy_strpn(display_long)|uniprotkb:rpoY(gene name)|psi-mi:rpoY(display_short)|uniprotkb:RNA polymerase epsilon subunit(gene name synonym)|uniprotkb:Transcriptase subunit epsilon(gene name synonym)|uniprotkb:SP_0122(locus name) psi-mi:a0a0h2un16_strpn(display_long)|uniprotkb:SP_0099(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475451|imex:IM-18537-260 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74308(transcript)|ensemblbacteria:SP_0122(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR009907(Protein of unknown function DUF1447)|refseq:WP_000639589.1 ensemblbacteria:AAK74286(transcript)|ensemblbacteria:SP_0099(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000198689.1|interpro:IPR012963(Protein of unknown function DUF1700)|uniprotkb:Q97T56(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:2ue9JLmRULco8byqcGtmBDXxisg170187 rogid:09knJiDtPQ/M8iNOMf42VzvQK1w170187 intact-crc:DCD8477CD084849E|rigid:Z3aK03nuDpokCSepOUHpoRHvgow false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97T34 uniprotkb:A0A0H2UN16 intact:EBI-6475457|ensemblbacteria:AAK74308 intact:EBI-6475454|ensemblbacteria:AAK74286 psi-mi:rpoy_strpn(display_long)|uniprotkb:rpoY(gene name)|psi-mi:rpoY(display_short)|uniprotkb:RNA polymerase epsilon subunit(gene name synonym)|uniprotkb:Transcriptase subunit epsilon(gene name synonym)|uniprotkb:SP_0122(locus name) psi-mi:a0a0h2un16_strpn(display_long)|uniprotkb:SP_0099(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475468|imex:IM-18537-261 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74308(transcript)|ensemblbacteria:SP_0122(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR009907(Protein of unknown function DUF1447)|refseq:WP_000639589.1 ensemblbacteria:AAK74286(transcript)|ensemblbacteria:SP_0099(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000198689.1|interpro:IPR012963(Protein of unknown function DUF1700)|uniprotkb:Q97T56(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:2ue9JLmRULco8byqcGtmBDXxisg170187 rogid:09knJiDtPQ/M8iNOMf42VzvQK1w170187 intact-crc:612AA3C7943B1FEA|rigid:Z3aK03nuDpokCSepOUHpoRHvgow false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN08 uniprotkb:A0A0H2UMY4 intact:EBI-6475426|ensemblbacteria:AAK74313 intact:EBI-6475423|ensemblbacteria:AAK74289 psi-mi:a0a0h2un08_strpn(display_long)|uniprotkb:SP_0127(locus name) psi-mi:a0a0h2umy4_strpn(display_long)|uniprotkb:SP_0102(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475479|imex:IM-18537-262 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74313(transcript)|ensemblbacteria:SP_0127(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|refseq:WP_000865689.1|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR022496|uniprotkb:Q97T29(uniprot-removed-ac)|interpro:IPR043129 ensemblbacteria:AAK74289(transcript)|ensemblbacteria:SP_0102(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97T53(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:TouiGw86kyamXO96e1XKSGayoV8170187 rogid:jbdy1Oy89+KT5M/7tgoaB8OBZjo170187 intact-crc:4933DEEA81CCC653|rigid:EWMlQo/88QQs9AUDAcFj5iA2R90 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97PM9 uniprotkb:A0A0H2UN55 intact:EBI-6474064|ensemblbacteria:AAK75662 intact:EBI-6474058|ensemblbacteria:AAK74287 psi-mi:metaa_strpn(display_long)|uniprotkb:metAA(gene name)|psi-mi:metAA(display_short)|uniprotkb:Homoserine transacetylase(gene name synonym)|uniprotkb:metA(gene name synonym)|uniprotkb:SP_1576(locus name) psi-mi:a0a0h2un55_strpn(display_long)|uniprotkb:SP_0100(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475501|imex:IM-18537-264 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR033752|ensemblbacteria:AAK75662(transcript)|ensemblbacteria:SP_1576(gene)|go:"GO:0004414"(homoserine O-acetyltransferase activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0008899"(homoserine O-succinyltransferase activity)|go:"GO:0019281"(L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine)|refseq:WP_001122709.1|interpro:IPR005697(Homoserine O-succinyltransferase)|interpro:IPR029062 ensemblbacteria:AAK74287(transcript)|ensemblbacteria:SP_0100(gene)|refseq:WP_000273863.1|interpro:IPR005149(Transcriptional regulator PadR-like)|uniprotkb:Q97T55(uniprot-removed-ac)|interpro:IPR036388|interpro:IPR036390 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jIgw270py70Q6sttBrj9R2w4WeY170187 rogid:f3Drf+KFtMrt5cQTplCbMbJNVtQ170187 intact-crc:E0EC99B38969BE37|rigid:2SyxyfPVgbKh51Ik9yfLLuLOfqw false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMY4 uniprotkb:A0A0H2UN08 intact:EBI-6475423|ensemblbacteria:AAK74289 intact:EBI-6475426|ensemblbacteria:AAK74313 psi-mi:a0a0h2umy4_strpn(display_long)|uniprotkb:SP_0102(locus name) psi-mi:a0a0h2un08_strpn(display_long)|uniprotkb:SP_0127(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475490|imex:IM-18537-263 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74289(transcript)|ensemblbacteria:SP_0102(gene)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016740"(transferase activity)|interpro:IPR001173(Glycosyl transferase, family 2)|interpro:IPR029044|uniprotkb:Q97T53(uniprot-removed-ac) ensemblbacteria:AAK74313(transcript)|ensemblbacteria:SP_0127(gene)|go:"GO:0002949"(tRNA threonylcarbamoyladenosine modification)|refseq:WP_000865689.1|interpro:IPR000905(Peptidase M22, glycoprotease)|interpro:IPR022496|uniprotkb:Q97T29(uniprot-removed-ac)|interpro:IPR043129 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:jbdy1Oy89+KT5M/7tgoaB8OBZjo170187 rogid:TouiGw86kyamXO96e1XKSGayoV8170187 intact-crc:F4C13A51C5735D27|rigid:EWMlQo/88QQs9AUDAcFj5iA2R90 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN16 uniprotkb:Q97T34 intact:EBI-6475454|ensemblbacteria:AAK74286 intact:EBI-6475457|ensemblbacteria:AAK74308 psi-mi:a0a0h2un16_strpn(display_long)|uniprotkb:SP_0099(locus name) psi-mi:rpoy_strpn(display_long)|uniprotkb:rpoY(gene name)|psi-mi:rpoY(display_short)|uniprotkb:RNA polymerase epsilon subunit(gene name synonym)|uniprotkb:Transcriptase subunit epsilon(gene name synonym)|uniprotkb:SP_0122(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475512|imex:IM-18537-265 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74286(transcript)|ensemblbacteria:SP_0099(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000198689.1|interpro:IPR012963(Protein of unknown function DUF1700)|uniprotkb:Q97T56(uniprot-removed-ac) ensemblbacteria:AAK74308(transcript)|ensemblbacteria:SP_0122(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR009907(Protein of unknown function DUF1447)|refseq:WP_000639589.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:09knJiDtPQ/M8iNOMf42VzvQK1w170187 rogid:2ue9JLmRULco8byqcGtmBDXxisg170187 intact-crc:89B0270FD6553F48|rigid:Z3aK03nuDpokCSepOUHpoRHvgow false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UN16 uniprotkb:Q97T34 intact:EBI-6475454|ensemblbacteria:AAK74286 intact:EBI-6475457|ensemblbacteria:AAK74308 psi-mi:a0a0h2un16_strpn(display_long)|uniprotkb:SP_0099(locus name) psi-mi:rpoy_strpn(display_long)|uniprotkb:rpoY(gene name)|psi-mi:rpoY(display_short)|uniprotkb:RNA polymerase epsilon subunit(gene name synonym)|uniprotkb:Transcriptase subunit epsilon(gene name synonym)|uniprotkb:SP_0122(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475523|imex:IM-18537-266 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74286(transcript)|ensemblbacteria:SP_0099(gene)|go:"GO:0016021"(integral component of membrane)|refseq:WP_000198689.1|interpro:IPR012963(Protein of unknown function DUF1700)|uniprotkb:Q97T56(uniprot-removed-ac) ensemblbacteria:AAK74308(transcript)|ensemblbacteria:SP_0122(gene)|go:"GO:0003677"(DNA binding)|go:"GO:0003899"(DNA-directed 5'-3' RNA polymerase activity)|go:"GO:0006351"(transcription, DNA-templated)|interpro:IPR009907(Protein of unknown function DUF1447)|refseq:WP_000639589.1 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:09knJiDtPQ/M8iNOMf42VzvQK1w170187 rogid:2ue9JLmRULco8byqcGtmBDXxisg170187 intact-crc:3442C3B492EAA43C|rigid:Z3aK03nuDpokCSepOUHpoRHvgow false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMV2 uniprotkb:A0A0H2UQB9 intact:EBI-6474459|ensemblbacteria:AAK74255 intact:EBI-6474463|ensemblbacteria:AAK75320 psi-mi:a0a0h2umv2_strpn(display_long)|uniprotkb:galM(gene name)|psi-mi:galM(display_short)|uniprotkb:SP_0066(locus name) psi-mi:a0a0h2uqb9_strpn(display_long)|uniprotkb:SP_1213(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475534|imex:IM-18537-267 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74255(transcript)|ensemblbacteria:SP_0066(gene)|go:"GO:0004034"(aldose 1-epimerase activity)|go:"GO:0019318"(hexose metabolic process)|go:"GO:0030246"(carbohydrate binding)|refseq:WP_000649425.1|interpro:IPR008183(Aldose 1-epimerase)|interpro:IPR011013(Glycoside hydrolase-type carbohydrate-binding)|interpro:IPR014718(Glycoside hydrolase-type carbohydrate-binding, subgroup)|interpro:IPR015443(Aldose-1-epimerase)|interpro:IPR018052|uniprotkb:Q97T84(uniprot-removed-ac) ensemblbacteria:AAK75320(transcript)|ensemblbacteria:SP_1213(gene)|refseq:WP_001002614.1|interpro:IPR019219|uniprotkb:Q97QJ2(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:e3bxZbB1jKO3pc7XZM2aX75SQ4I170187 rogid:aEDmLoczE/xaDWG7gDZwUWPxWMw170187 intact-crc:73B1C9168753D18D|rigid:VXCaEZtCG1XUMuMuJy5BbyBuvew false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNY0 uniprotkb:A0A0H2UMT9 intact:EBI-6474949|ensemblbacteria:AAK74745 intact:EBI-6474953|ensemblbacteria:AAK74237 psi-mi:a0a0h2uny0_strpn(display_long)|uniprotkb:mrnC(gene name)|psi-mi:mrnC(display_short)|uniprotkb:Mini-RNase III(gene name synonym)|uniprotkb:SP_0592(locus name) psi-mi:a0a0h2umt9_strpn(display_long)|uniprotkb:purN(gene name)|psi-mi:purN(display_short)|uniprotkb:5'-phosphoribosylglycinamide transformylase(gene name synonym)|uniprotkb:GAR transformylase(gene name synonym)|uniprotkb:SP_0048(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475545|imex:IM-18537-268 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74745(transcript)|ensemblbacteria:SP_0592(gene)|go:"GO:0004525"(ribonuclease III activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|refseq:WP_000567914.1|interpro:IPR000999(Ribonuclease III)|interpro:IPR008226(Uncharacterised conserved protein UCP005520)|uniprotkb:Q97S24(uniprot-removed-ac)|interpro:IPR036389 ensemblbacteria:AAK74237(transcript)|ensemblbacteria:SP_0048(gene)|go:"GO:0004644"(phosphoribosylglycinamide formyltransferase activity)|go:"GO:0006189"('de novo' IMP biosynthetic process)|refseq:WP_000717501.1|interpro:IPR002376(Formyl transferase, N-terminal)|interpro:IPR004607(Phosphoribosylglycinamide formyltransferase)|uniprotkb:Q97TA1(uniprot-removed-ac)|interpro:IPR036477 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:5LCAnqWFp7dN6jM9IR2Um3L7hVU170187 rogid:6JWLHR1U6fhhTJa9VQhnfCqgA6o170187 intact-crc:335992DF1E48A686|rigid:65r7qSsGCRm2TgYCUWGwe4+aqec false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNY0 uniprotkb:A0A0H2UMT9 intact:EBI-6474949|ensemblbacteria:AAK74745 intact:EBI-6474953|ensemblbacteria:AAK74237 psi-mi:a0a0h2uny0_strpn(display_long)|uniprotkb:mrnC(gene name)|psi-mi:mrnC(display_short)|uniprotkb:Mini-RNase III(gene name synonym)|uniprotkb:SP_0592(locus name) psi-mi:a0a0h2umt9_strpn(display_long)|uniprotkb:purN(gene name)|psi-mi:purN(display_short)|uniprotkb:5'-phosphoribosylglycinamide transformylase(gene name synonym)|uniprotkb:GAR transformylase(gene name synonym)|uniprotkb:SP_0048(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475556|imex:IM-18537-269 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74745(transcript)|ensemblbacteria:SP_0592(gene)|go:"GO:0004525"(ribonuclease III activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0019843"(rRNA binding)|refseq:WP_000567914.1|interpro:IPR000999(Ribonuclease III)|interpro:IPR008226(Uncharacterised conserved protein UCP005520)|uniprotkb:Q97S24(uniprot-removed-ac)|interpro:IPR036389 ensemblbacteria:AAK74237(transcript)|ensemblbacteria:SP_0048(gene)|go:"GO:0004644"(phosphoribosylglycinamide formyltransferase activity)|go:"GO:0006189"('de novo' IMP biosynthetic process)|refseq:WP_000717501.1|interpro:IPR002376(Formyl transferase, N-terminal)|interpro:IPR004607(Phosphoribosylglycinamide formyltransferase)|uniprotkb:Q97TA1(uniprot-removed-ac)|interpro:IPR036477 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:5LCAnqWFp7dN6jM9IR2Um3L7hVU170187 rogid:6JWLHR1U6fhhTJa9VQhnfCqgA6o170187 intact-crc:8EAB76645AF73DF2|rigid:65r7qSsGCRm2TgYCUWGwe4+aqec false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UNI9 uniprotkb:Q97TA2 intact:EBI-6475169|ensemblbacteria:AAK74575 intact:EBI-6475165|ensemblbacteria:AAK74236 psi-mi:a0a0h2uni9_strpn(display_long)|uniprotkb:SP_0412(locus name) psi-mi:pur5_strpn(display_long)|uniprotkb:AIR synthase(gene name synonym)|uniprotkb:AIRS(gene name synonym)|uniprotkb:Phosphoribosyl-aminoimidazole synthetase(gene name synonym)|uniprotkb:SP_0047(locus name)|uniprotkb:purM(gene name)|psi-mi:purM(display_short) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475567|imex:IM-18537-270 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74575(transcript)|ensemblbacteria:SP_0412(gene)|refseq:WP_000079358.1|interpro:IPR010360(Protein of unknown function DUF956)|uniprotkb:Q97SF9(uniprot-removed-ac) ensemblbacteria:AAK74236(transcript)|ensemblbacteria:SP_0047(gene)|go:"GO:0004641"(phosphoribosylformylglycinamidine cyclo-ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006189"('de novo' IMP biosynthetic process)|interpro:IPR004733(Phosphoribosylformylglycinamidine cyclo-ligase)|interpro:IPR010918(AIR synthase related protein, C-terminal)|interpro:IPR016188(PurM, N-terminal-like)|refseq:WP_001284589.1|interpro:IPR036676|interpro:IPR036921 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:E8fQ3XSE3GEm9K2FaSV/qiTMpIE170187 rogid:UJsHNtkBF9CBmKVIsTfBpGUXlrg170187 intact-crc:BD195A119A199303|rigid:UEs8zQdT/IabfoURl5Kj2upGMEs false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97TA2 uniprotkb:A0A0H2UNI9 intact:EBI-6475165|ensemblbacteria:AAK74236 intact:EBI-6475169|ensemblbacteria:AAK74575 psi-mi:pur5_strpn(display_long)|uniprotkb:AIR synthase(gene name synonym)|uniprotkb:AIRS(gene name synonym)|uniprotkb:Phosphoribosyl-aminoimidazole synthetase(gene name synonym)|uniprotkb:SP_0047(locus name)|uniprotkb:purM(gene name)|psi-mi:purM(display_short) psi-mi:a0a0h2uni9_strpn(display_long)|uniprotkb:SP_0412(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475578|imex:IM-18537-271 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74236(transcript)|ensemblbacteria:SP_0047(gene)|go:"GO:0004641"(phosphoribosylformylglycinamidine cyclo-ligase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0006189"('de novo' IMP biosynthetic process)|interpro:IPR004733(Phosphoribosylformylglycinamidine cyclo-ligase)|interpro:IPR010918(AIR synthase related protein, C-terminal)|interpro:IPR016188(PurM, N-terminal-like)|refseq:WP_001284589.1|interpro:IPR036676|interpro:IPR036921 ensemblbacteria:AAK74575(transcript)|ensemblbacteria:SP_0412(gene)|refseq:WP_000079358.1|interpro:IPR010360(Protein of unknown function DUF956)|uniprotkb:Q97SF9(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:UJsHNtkBF9CBmKVIsTfBpGUXlrg170187 rogid:E8fQ3XSE3GEm9K2FaSV/qiTMpIE170187 intact-crc:00EBBEAADEA60877|rigid:UEs8zQdT/IabfoURl5Kj2upGMEs false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMW1 uniprotkb:A0A0H2UNM1 intact:EBI-6475104|ensemblbacteria:AAK74223 intact:EBI-6475110|ensemblbacteria:AAK74620 psi-mi:a0a0h2umw1_strpn(display_long)|uniprotkb:SP_0033(locus name) psi-mi:a0a0h2unm1_strpn(display_long)|uniprotkb:SP_0460(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475607|imex:IM-18537-273 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74223(transcript)|ensemblbacteria:SP_0033(gene)|refseq:WP_000076479.1|interpro:IPR003781(CoA-binding)|uniprotkb:Q97TB0(uniprot-removed-ac)|interpro:IPR036291 ensemblbacteria:AAK74620(transcript)|ensemblbacteria:SP_0460(gene)|refseq:WP_000400087.1|interpro:IPR002560(Transposase, IS204/IS1001/IS1096/IS1165)|interpro:IPR029261|uniprotkb:Q97SC5(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:siUp9tjMrxi+yk/+G3iwGe+Ybe4170187 rogid:wAbSuG+ciWEYTHwAkck3rMZke9I170187 intact-crc:88E702A67A0B998C|rigid:And9JIEe+U2IkrY+6Q/897lCDe8 false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:Q97TA6 uniprotkb:Q97RB5 intact:EBI-6475589|ensemblbacteria:AAK74227 intact:EBI-6475593|ensemblbacteria:AAK75034 psi-mi:plsx_strpn(display_long)|uniprotkb:Acyl-ACP phosphotransacylase(gene name synonym)|uniprotkb:Acyl-[acyl-carrier-protein]--phosphate acyltransferase(gene name synonym)|uniprotkb:Phosphate-acyl-ACP acyltransferase(gene name synonym)|uniprotkb:SP_0037(locus name)|uniprotkb:plsX(gene name)|psi-mi:plsX(display_short) psi-mi:sprtl_strpn(display_long)|uniprotkb:SP_0909(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475596|imex:IM-18537-272 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74227(transcript)|ensemblbacteria:SP_0037(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0006633"(fatty acid biosynthetic process)|go:"GO:0008654"(phospholipid biosynthetic process)|go:"GO:0043811"("phosphate:acyl-[acyl carrier protein] acyltransferase activity")|interpro:IPR003664(Fatty acid synthesis plsX protein)|interpro:IPR012281(Phospholipid biosynthesis protein, PlsX type)|refseq:WP_000717458.1 ensemblbacteria:AAK75034(transcript)|ensemblbacteria:SP_0909(gene)|go:"GO:0005737"(cytoplasm)|go:"GO:0008270"(zinc ion binding)|interpro:IPR006640(Protein of unknown function SprT)|interpro:IPR023524|refseq:WP_000778585.1|interpro:IPR035240 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:8xyfit0586MmJ9V91u3g7JVTCGY170187 rogid:M4hxl6V6109posf5lQgPr7GCHJ8170187 intact-crc:AD0C3EC04E4E57FA|rigid:KBqsI2KCCunPvyB1xH6LsihVDV4 false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMS9 uniprotkb:Q97R80 intact:EBI-6474612|ensemblbacteria:AAK74219 intact:EBI-6474606|ensemblbacteria:AAK75070 psi-mi:a0a0h2ums9_strpn(display_long)|uniprotkb:SP_0029(locus name) psi-mi:y947_strpn(display_long)|uniprotkb:SP_0947(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475618|imex:IM-18537-274 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74219(transcript)|ensemblbacteria:SP_0029(gene)|uniprotkb:Q97TB3(uniprot-removed-ac)|refseq:WP_000492733.1 ensemblbacteria:AAK75070(transcript)|ensemblbacteria:SP_0947(gene)|interpro:IPR010673(Protein of unknown function DUF1250)|interpro:IPR023089|refseq:WP_001232085.1|interpro:IPR036806 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:XOIVUCinRBc7hg2M8np9DVMLWbI170187 rogid:ITF03ygbsuc/x8446FlYIE/tpDo170187 intact-crc:74ACEDA2BAE7B4E5|rigid:1zoNkByaOyeJjMk1pEqXYg/l/YA false his tag:c-c("MI:0521") t7 tag:n-n("MI:0523") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UMS9 uniprotkb:Q97R80 intact:EBI-6474612|ensemblbacteria:AAK74219 intact:EBI-6474606|ensemblbacteria:AAK75070 psi-mi:a0a0h2ums9_strpn(display_long)|uniprotkb:SP_0029(locus name) psi-mi:y947_strpn(display_long)|uniprotkb:SP_0947(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475629|imex:IM-18537-275 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK74219(transcript)|ensemblbacteria:SP_0029(gene)|uniprotkb:Q97TB3(uniprot-removed-ac)|refseq:WP_000492733.1 ensemblbacteria:AAK75070(transcript)|ensemblbacteria:SP_0947(gene)|interpro:IPR010673(Protein of unknown function DUF1250)|interpro:IPR023089|refseq:WP_001232085.1|interpro:IPR036806 - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:XOIVUCinRBc7hg2M8np9DVMLWbI170187 rogid:ITF03ygbsuc/x8446FlYIE/tpDo170187 intact-crc:C95E0919FE582F91|rigid:1zoNkByaOyeJjMk1pEqXYg/l/YA false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining) uniprotkb:A0A0H2UQS7 uniprotkb:A0A0H2UMZ1 intact:EBI-6474115|ensemblbacteria:AAK75624 intact:EBI-6474121|ensemblbacteria:AAK74212 psi-mi:a0a0h2uqs7_strpn(display_long)|uniprotkb:SP_1536(locus name) psi-mi:a0a0h2umz1_strpn(display_long)|uniprotkb:tadA(gene name)|psi-mi:tadA(display_short)|uniprotkb:SP_0020(locus name) psi-mi:"MI:0946"(miniaturized immunoprecipitation) Meier et al. (2012) pubmed:23267104|imex:IM-18537|psi-mi:"MI:0946" taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") taxid:170187(strpn)|taxid:170187("Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6475640|imex:IM-18537-276 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAK75624(transcript)|ensemblbacteria:SP_1536(gene)|go:"GO:0003676"(nucleic acid binding)|go:"GO:0008168"(methyltransferase activity)|go:"GO:0032259"(methylation)|refseq:WP_000390785.1|interpro:IPR002052(N-6 adenine-specific DNA methylase, conserved site)|interpro:IPR007848(Methyltransferase small)|interpro:IPR029063|uniprotkb:Q97PR6(uniprot-removed-ac) ensemblbacteria:AAK74212(transcript)|ensemblbacteria:SP_0020(gene)|go:"GO:0002100"(tRNA wobble adenosine to inosine editing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0052717"(tRNA-specific adenosine-34 deaminase activity)|refseq:WP_000291875.1|interpro:IPR002125(CMP/dCMP deaminase, zinc-binding)|interpro:IPR016192(APOBEC/CMP deaminase, zinc-binding)|interpro:IPR016193(Cytidine deaminase-like)|interpro:IPR028883|uniprotkb:Q97TC0(uniprot-removed-ac) - - - figure legend:table S4|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/01/09 2014/10/16 rogid:b3ePqWM5bURsjFyfFQ7C3fZydCM170187 rogid:EmvdxduBlo+tTYGi9Vu/RUpPBDQ170187 intact-crc:B3CF58611681E297|rigid:IUFXnApd0bNm7v1MPW209i12/kk false t7 tag:n-n("MI:0523") his tag:c-c("MI:0521") - - psi-mi:"MI:0707"(anti tag immunostaining) psi-mi:"MI:0707"(anti tag immunostaining)