#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9FME4 uniprotkb:Q9FIR7 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-4463247|ensemblplants:AT5G24680.1 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:q9fir7_arath(display_long)|uniprotkb:MXC17.7(gene name)|psi-mi:MXC17.7(display_short)|uniprotkb:MXC17_7(gene name synonym)|uniprotkb:At5g24680(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6913681|imex:IM-21135-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW interpro:IPR012462(Peptidase C78, ubiquitin fold modifier-specific peptidase 1 and 2)|refseq:NP_197856.1|ensemblplants:AT5G24680(gene)|ensemblplants:AT5G24680.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0010468"(regulation of gene expression) - - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:xU8+/S63eqEZGD3mBWMWxuBQz2E3702 intact-crc:DF6D4E18818307C7|rigid:7Hxq1f1ThngVCVfTnzWfRsHPesg false cub:?-? nub:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9LPD7 uniprotkb:Q9FME4 intact:EBI-6913689|ensemblplants:AT1G44920.1 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 psi-mi:q9lpd7_arath(display_long)|uniprotkb:T12C22.21(orf name)|uniprotkb:T12C22_21(orf name)|uniprotkb:At1g44920(locus name) psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6913699|imex:IM-21135-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT1G44920(gene)|ensemblplants:AT1G44920.1(transcript)|go:"GO:0003729"(mRNA binding)|go:"GO:0009507"(chloroplast)|go:"GO:0016021"(integral component of membrane)|interpro:IPR021414|refseq:NP_564492.1 ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW - - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:j3Sodf29yB5rKgfM9gn/UQvQQpk3702 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 intact-crc:066FED2A6FC5584E|rigid:mocsbj9CYJwm3rfjFpw+0gjTOWI false nub:?-? cub:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9FME4 uniprotkb:Q9C518 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-3134124|ensemblplants:AT1G58100.1|uniprotkb:A8MQM9 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:tcp8_arath(display_long)|uniprotkb:TCP8(gene name)|psi-mi:TCP8(display_short)|uniprotkb:T15M6.11(orf name)|uniprotkb:T18I24.2(orf name)|uniprotkb:At1g58100(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6913706|imex:IM-21135-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW ensemblplants:AT1G58100(gene)|ensemblplants:AT1G58100.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0043565"(sequence-specific DNA binding)|refseq:NP_001077739.1|refseq:NP_176107.1|interpro:IPR017887|interpro:IPR005333(Transcription factor, TCP) - - - full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:Ot3HNEdG4rOz95LXJaVuDajgY4k3702 intact-crc:CD2325623139052E|rigid:MyIobT7wQ30eO1QxppL/qvUYPV0 false cub:?-? nub:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9SZI2 uniprotkb:Q9FME4 intact:EBI-4424361|uniprotkb:Q38809|ensemblplants:AT4G26110.1 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 psi-mi:nap1a_arath(display_long)|uniprotkb:NAP1;1(gene name)|psi-mi:NAP1;1(display_short)|uniprotkb:NFA1(gene name synonym)|uniprotkb:Nucleosome/chromatin assembly factor group A1(gene name synonym)|uniprotkb:F20B18.220(orf name)|uniprotkb:At4g26110(locus name) psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6913661|imex:IM-21135-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_194341.1|interpro:IPR002164("Nucleosome assembly protein (NAP)")|interpro:IPR037231|ensemblplants:AT4G26110(gene)|ensemblplants:AT4G26110.1(transcript)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0008283"(cell population proliferation)|go:"GO:0016444"(somatic cell DNA recombination)|go:"GO:0030154"(cell differentiation)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW - - - figure legend:no figure|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:BQb+EgjT5S0lFgF/rtCVJIVlQCU3702 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 intact-crc:F02A5AC1B6A29558|rigid:oKgvjV6MA5Wkdnm8vrMUhS31CE8 false nub:?-? cub:?-? - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q9C518 uniprotkb:Q9FME4 intact:EBI-3134124|ensemblplants:AT1G58100.1|uniprotkb:A8MQM9 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 psi-mi:tcp8_arath(display_long)|uniprotkb:TCP8(gene name)|psi-mi:TCP8(display_short)|uniprotkb:T15M6.11(orf name)|uniprotkb:T18I24.2(orf name)|uniprotkb:At1g58100(locus name) psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914428|imex:IM-21135-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT1G58100(gene)|ensemblplants:AT1G58100.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0043565"(sequence-specific DNA binding)|refseq:NP_001077739.1|refseq:NP_176107.1|interpro:IPR017887|interpro:IPR005333(Transcription factor, TCP) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW - - - figure legend:Fig. 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:Ot3HNEdG4rOz95LXJaVuDajgY4k3702 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 intact-crc:3B5CF7875A5B8726|rigid:MyIobT7wQ30eO1QxppL/qvUYPV0 false nub:?-? cub:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SZI2 uniprotkb:Q9FME4 intact:EBI-4424361|uniprotkb:Q38809|ensemblplants:AT4G26110.1 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 psi-mi:nap1a_arath(display_long)|uniprotkb:NAP1;1(gene name)|psi-mi:NAP1;1(display_short)|uniprotkb:NFA1(gene name synonym)|uniprotkb:Nucleosome/chromatin assembly factor group A1(gene name synonym)|uniprotkb:F20B18.220(orf name)|uniprotkb:At4g26110(locus name) psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914420|imex:IM-21135-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_194341.1|interpro:IPR002164("Nucleosome assembly protein (NAP)")|interpro:IPR037231|ensemblplants:AT4G26110(gene)|ensemblplants:AT4G26110.1(transcript)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0008283"(cell population proliferation)|go:"GO:0016444"(somatic cell DNA recombination)|go:"GO:0030154"(cell differentiation)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW - - - figure legend:Fig. 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:BQb+EgjT5S0lFgF/rtCVJIVlQCU3702 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 intact-crc:A9C16B169B3A67F0|rigid:oKgvjV6MA5Wkdnm8vrMUhS31CE8 false nub:?-? cub:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9FME4 uniprotkb:Q9SZI2 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-4424361|uniprotkb:Q38809|ensemblplants:AT4G26110.1 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:nap1a_arath(display_long)|uniprotkb:NAP1;1(gene name)|psi-mi:NAP1;1(display_short)|uniprotkb:NFA1(gene name synonym)|uniprotkb:Nucleosome/chromatin assembly factor group A1(gene name synonym)|uniprotkb:F20B18.220(orf name)|uniprotkb:At4g26110(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914436|imex:IM-21135-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW refseq:NP_194341.1|interpro:IPR002164("Nucleosome assembly protein (NAP)")|interpro:IPR037231|ensemblplants:AT4G26110(gene)|ensemblplants:AT4G26110.1(transcript)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0008283"(cell population proliferation)|go:"GO:0016444"(somatic cell DNA recombination)|go:"GO:0030154"(cell differentiation)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding) - - - figure legend:Fig. 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:BQb+EgjT5S0lFgF/rtCVJIVlQCU3702 intact-crc:8A4B564480D6C604|rigid:oKgvjV6MA5Wkdnm8vrMUhS31CE8 false nub:?-? cub:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9FME4 uniprotkb:Q9C518 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-3134124|ensemblplants:AT1G58100.1|uniprotkb:A8MQM9 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:tcp8_arath(display_long)|uniprotkb:TCP8(gene name)|psi-mi:TCP8(display_short)|uniprotkb:T15M6.11(orf name)|uniprotkb:T18I24.2(orf name)|uniprotkb:At1g58100(locus name) psi-mi:"MI:0112"(ubiquitin reconstruction) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914444|imex:IM-21135-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW ensemblplants:AT1G58100(gene)|ensemblplants:AT1G58100.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0043565"(sequence-specific DNA binding)|refseq:NP_001077739.1|refseq:NP_176107.1|interpro:IPR017887|interpro:IPR005333(Transcription factor, TCP) - - - figure legend:Fig. 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:Ot3HNEdG4rOz95LXJaVuDajgY4k3702 intact-crc:2A90336844582E8D|rigid:MyIobT7wQ30eO1QxppL/qvUYPV0 false nub:?-? cub:?-? - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9FME4 uniprotkb:Q9SZI2 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-4424361|uniprotkb:Q38809|ensemblplants:AT4G26110.1 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:nap1a_arath(display_long)|uniprotkb:NAP1;1(gene name)|psi-mi:NAP1;1(display_short)|uniprotkb:NFA1(gene name synonym)|uniprotkb:Nucleosome/chromatin assembly factor group A1(gene name synonym)|uniprotkb:F20B18.220(orf name)|uniprotkb:At4g26110(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914459|imex:IM-21135-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW refseq:NP_194341.1|interpro:IPR002164("Nucleosome assembly protein (NAP)")|interpro:IPR037231|ensemblplants:AT4G26110(gene)|ensemblplants:AT4G26110.1(transcript)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0000785"(chromatin)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006281"(DNA repair)|go:"GO:0006334"(nucleosome assembly)|go:"GO:0008283"(cell population proliferation)|go:"GO:0016444"(somatic cell DNA recombination)|go:"GO:0030154"(cell differentiation)|go:"GO:0042393"(histone binding)|go:"GO:0042802"(identical protein binding) go:"GO:0005634"(nucleus) - - figure legend:Fig. 4B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:546498(allium_epidermis)|taxid:546498("Allium cepa (onion)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:BQb+EgjT5S0lFgF/rtCVJIVlQCU3702 intact-crc:6CD78F77E7E911C8|rigid:oKgvjV6MA5Wkdnm8vrMUhS31CE8 false bifc tag:?-? bifc tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence) uniprotkb:Q9FME4 uniprotkb:Q9C518 intact:EBI-6913662|ensemblplants:AT5G60960.1|uniprotkb:Q8LCR2 intact:EBI-3134124|ensemblplants:AT1G58100.1|uniprotkb:A8MQM9 psi-mi:pp438_arath(display_long)|uniprotkb:PNM1(gene name)|psi-mi:PNM1(display_short)|uniprotkb:PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1(gene name synonym)|uniprotkb:MSL3.8(orf name)|uniprotkb:At5g60960(locus name) psi-mi:tcp8_arath(display_long)|uniprotkb:TCP8(gene name)|psi-mi:TCP8(display_short)|uniprotkb:T15M6.11(orf name)|uniprotkb:T18I24.2(orf name)|uniprotkb:At1g58100(locus name) psi-mi:"MI:0809"(bimolecular fluorescence complementation) Hammani et al. (2011) pubmed:21297037|imex:IM-21135 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-6914468|imex:IM-21135-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblplants:AT5G60960(gene)|ensemblplants:AT5G60960.1(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0003729"(mRNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0005759"(mitochondrial matrix)|go:"GO:0006417"(regulation of translation)|interpro:IPR011990(Tetratricopeptide-like helical)|interpro:IPR002885(Pentatricopeptide repeat)|refseq:NP_200904.1|rcsb pdb:6XYW ensemblplants:AT1G58100(gene)|ensemblplants:AT1G58100.1(transcript)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0000978"(RNA polymerase II cis-regulatory region sequence-specific DNA binding)|go:"GO:0003700"(DNA-binding transcription factor activity)|go:"GO:0005634"(nucleus)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0043565"(sequence-specific DNA binding)|refseq:NP_001077739.1|refseq:NP_176107.1|interpro:IPR017887|interpro:IPR005333(Transcription factor, TCP) go:"GO:0005634"(nucleus) - - figure legend:Fig. 4B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:546498(allium_epidermis)|taxid:546498("Allium cepa (onion)") - 2013/07/31 2014/10/16 rogid:56N8XPh6wd56V5UriwSkUV/WOqk3702 rogid:Ot3HNEdG4rOz95LXJaVuDajgY4k3702 intact-crc:4DB360A0702654AB|rigid:MyIobT7wQ30eO1QxppL/qvUYPV0 false bifc tag:?-? bifc tag:?-? - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence)