#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P0AFY8 uniprotkb:P0AFY8 intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:"MI:0071"(molecular sieving) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6671578|imex:IM-20594-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT - crc64:37D9078CA3D7229B crc64:37D9078CA3D7229B figure legend:Fig. 1b|comment:"Tetramer present when SeqA in low concentration or in 5% (v/v) isopropanol. Otherwise forms larger homo-multimers."|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/05/10 2014/10/16 rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 intact-crc:7352D87809C03738|rigid:syFRgJK2kjXv3CXF2C1q/LYz+O4 false sufficient binding region:51-181 sufficient binding region:51-181 - 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P0AFY8 uniprotkb:P0AFY8 intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:"MI:0030"(cross-linking study) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-6671604|imex:IM-20594-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT - crc64:37D9078CA3D7229B crc64:37D9078CA3D7229B figure legend:Fig. 1c|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/05/10 2014/10/16 rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 intact-crc:45CFC23DB6E8BE82|rigid:syFRgJK2kjXv3CXF2C1q/LYz+O4 false sufficient binding region:51-181 sufficient binding region:51-181 2 0 psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) psi-mi:"MI:0818"(molecular weight estimation by coomasie staining) intact:EBI-6671633 intact:EBI-6675502 - - psi-mi:hemimeth_dna_forw(display_short)|psi-mi:EBI-6671633(display_long) psi-mi:hemimeth_dna_rev(display_short)|psi-mi:EBI-6675502(display_long) psi-mi:"MI:0028"(cosedimentation in solution) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6671630|imex:IM-20594-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) pubmed:12379844(primary-reference) pubmed:12379844(primary-reference) - - - figure legend:Fig. 1d|comment:Reverse DNA oligo is methylated on Adenine6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) kd:7.0x10^-6(molar) 2013/05/10 2014/10/16 - - intact-crc:A6366D0AED79E3C6 false binding-associated region:1-12 binding-associated region:1-14 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) intact:EBI-6671633 uniprotkb:P0AFY8 - intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 psi-mi:hemimeth_dna_forw(display_short)|psi-mi:EBI-6671633(display_long) psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:"MI:0028"(cosedimentation in solution) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6671630|imex:IM-20594-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) psi-mi:"MI:0326"(protein) pubmed:12379844(primary-reference) refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT - - crc64:37D9078CA3D7229B figure legend:Fig. 1d|comment:Reverse DNA oligo is methylated on Adenine6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) kd:7.0x10^-6(molar) 2013/05/10 2014/10/16 - rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 intact-crc:A6366D0AED79E3C6 false binding-associated region:1-12 - - 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) intact:EBI-6671633 intact:EBI-6675502 - - psi-mi:hemimeth_dna_forw(display_short)|psi-mi:EBI-6671633(display_long) psi-mi:hemimeth_dna_rev(display_short)|psi-mi:EBI-6675502(display_long) psi-mi:"MI:0114"(x-ray crystallography) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6671646|imex:IM-20594-4|wwpdb:1lrr - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) pubmed:12379844(primary-reference) pubmed:12379844(primary-reference) - - - figure legend:Fig. 2|3d-r-factors:Rwork = 0.25; Rfree = 0.28|3d-resolution:2.65 A|comment:Reverse DNA oligo is methylated on Adenine6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/05/10 2014/10/16 - - intact-crc:07E35A688675EECB false binding-associated region:1-12 binding-associated region:1-14 1 - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) intact:EBI-6671633 uniprotkb:P0AFY8 - intact:EBI-552553|uniprotkb:P36658|ensemblbacteria:AAC73781|ensemblbacteria:BAA35336 psi-mi:hemimeth_dna_forw(display_short)|psi-mi:EBI-6671633(display_long) psi-mi:seqa_ecoli(display_long)|uniprotkb:seqA(gene name)|psi-mi:seqA(display_short)|uniprotkb:b0687(locus name)|uniprotkb:JW0674(locus name) psi-mi:"MI:0114"(x-ray crystallography) Guarné et al. (2002) pubmed:12379844|imex:IM-20594 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-6671646|imex:IM-20594-4|wwpdb:1lrr - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0680"(single stranded deoxyribonucleic acid) psi-mi:"MI:0326"(protein) pubmed:12379844(primary-reference) refseq:NP_415213.1|refseq:WP_000848387.1|dip:DIP-48017N|ensemblbacteria:AAC73781(transcript)|ensemblbacteria:b0687(gene)|ensemblbacteria:BAA35336(gene)|ensemblbacteria:BAA35336(transcript)|go:"GO:0003688"(DNA replication origin binding)|go:"GO:0005829"(cytosol)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0009314"(response to radiation)|go:"GO:0010385"(double-stranded methylated DNA binding)|go:"GO:0032297"(negative regulation of DNA-dependent DNA replication initiation)|go:"GO:0032991"(protein-containing complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0044729"(hemi-methylated DNA-binding)|go:"GO:0090143"(nucleoid organization)|go:"GO:1990097"(SeqA-DNA complex)|interpro:IPR005621(Regulation modulator SeqA)|interpro:IPR010985(Ribbon-helix-helix)|interpro:IPR013321(Arc-type ribbon-helix-helix)|interpro:IPR026577|interpro:IPR033761|interpro:IPR036835|rcsb pdb:1IU3|rcsb pdb:1J3E|rcsb pdb:1LRR|rcsb pdb:1XRX|rcsb pdb:2CH3|rcsb pdb:3FMT - - crc64:37D9078CA3D7229B figure legend:Fig. 2|3d-r-factors:Rwork = 0.25; Rfree = 0.28|3d-resolution:2.65 A|comment:Reverse DNA oligo is methylated on Adenine6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2013/05/10 2014/10/16 - rogid:ma8bSMqGLrkT6Tms0Ye4k+zQW/I83333 intact-crc:07E35A688675EECB false binding-associated region:1-12 sufficient binding region:51-181|L-selenomethionine:?-? 1 2 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)