#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:O31774 uniprotkb:O31774 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0028"(cosedimentation in solution) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0903"(mpidb) intact:EBI-6415590|mpidb:MPIDB-INT-1671|imex:IM-18415-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figures 3B and 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:457D82B075AAE24E|rigid:SE2DrWNZiCezL0xJ5dArggWc8IA false strep tag:?-? strep tag:?-? 2 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O31774 uniprotkb:O31774 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0028"(cosedimentation in solution) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0903"(mpidb) intact:EBI-6446345|mpidb:MPIDB-INT-1671|imex:IM-18415-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figures 3B and 3C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:54389591192E2B6C|rigid:SE2DrWNZiCezL0xJ5dArggWc8IA false strep tag:?-? strep tag:?-? 4 0 psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P50849 uniprotkb:O31774 intact:EBI-5254714|ensemblbacteria:CAB13542 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:pnp_bacsu(display_long)|uniprotkb:pnp(gene name)|psi-mi:pnp(display_short)|uniprotkb:comR(gene name synonym)|uniprotkb:pnpA(gene name synonym)|uniprotkb:Polynucleotide phosphorylase(gene name synonym)|uniprotkb:Vegetative protein 15(gene name synonym)|uniprotkb:BSU16690(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415638|mpidb:MPIDB-INT-1686|imex:IM-18415-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003231897.1|refseq:NP_389551.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR012162(Polyribonucleotide nucleotidyltransferase)|interpro:IPR015848(Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type)|interpro:IPR003029(S1, RNA binding)|interpro:IPR020568|interpro:IPR022967|interpro:IPR027408|interpro:IPR036345|interpro:IPR036612|ensemblbacteria:BSU_16690(gene)|ensemblbacteria:CAB13542(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003723"(RNA binding)|go:"GO:0004654"(polyribonucleotide nucleotidyltransferase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006396"(RNA processing)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0030420"(establishment of competence for transformation) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:bhR5HtJ6SxWEfPqKT8uxcRUn8S4224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:72433FE7EC1E7080|rigid:ecW8qstOQWJQe8XR5fHanNY11vg false - necessary binding region:5-24|necessary binding region:430-520 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O31774 uniprotkb:P37869 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415666|ensemblbacteria:CAB15395|uniprotkb:O32249 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:eno_bacsu(display_long)|uniprotkb:eno(gene name)|psi-mi:eno(display_short)|uniprotkb:2-phospho-D-glycerate hydro-lyase(gene name synonym)|uniprotkb:2-phosphoglycerate dehydratase(gene name synonym)|uniprotkb:BSU33900(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415662|mpidb:MPIDB-INT-1685|imex:IM-18415-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T ensemblbacteria:BSU_33900(gene)|ensemblbacteria:CAB15395(transcript)|go:"GO:0000015"(phosphopyruvate hydratase complex)|go:"GO:0004634"(phosphopyruvate hydratase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0006096"(glycolytic process)|go:"GO:0009986"(cell surface)|go:"GO:0030435"(sporulation resulting in formation of a cellular spore)|go:"GO:0032889"(regulation of vacuole fusion, non-autophagic)|go:"GO:0000287"(magnesium ion binding)|interpro:IPR000941(Enolase)|interpro:IPR020809|interpro:IPR020810|interpro:IPR020811|rcsb pdb:4A3R|refseq:NP_391270.1|interpro:IPR036849|refseq:WP_003228333.1|interpro:IPR029017 - - - figure legend:figure 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:9PHXZQTr9M4YKgKZcVrQU6vVfoU224308 intact-crc:708A016DEDC4EFE0|rigid:z0sUxDagQMJzw/hJiuB5Z4R9zKc false necessary binding region:430-520|necessary binding region:5-24 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P96614 uniprotkb:O31774 intact:EBI-6415210|ensemblbacteria:CAB12265|uniprotkb:Q797L0 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:csha_bacsu(display_long)|uniprotkb:cshA(gene name)|psi-mi:cshA(display_short)|uniprotkb:ydbR(gene name synonym)|uniprotkb:BSU04580(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415718|mpidb:MPIDB-INT-1683|imex:IM-18415-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_04580(gene)|ensemblbacteria:CAB12265(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0009409"(response to cold)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0043590"(bacterial nucleoid)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR030880|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|refseq:NP_388339.1|interpro:IPR027417|refseq:WP_003246685.1 ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:7wOqzTkjBa3cI6qUIXej5Y1KxNk224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:B79A5C4E49CEA7D9|rigid:wdeqlImFLMa5AeR1K0XhNDfgDEY false - necessary binding region:5-24|necessary binding region:430-520 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O34529 uniprotkb:O31774 intact:EBI-5250040|ensemblbacteria:CAB14879 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:pfka_bacsu(display_long)|uniprotkb:pfkA(gene name)|psi-mi:pfkA(display_short)|uniprotkb:pfk(gene name synonym)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:BSU29190(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415694|mpidb:MPIDB-INT-1684|imex:IM-18415-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003229420.1|refseq:NP_390797.1|interpro:IPR012003(ATP-dependent phosphofructokinase, prokaryotic)|interpro:IPR012828(6-phosphofructokinase)|interpro:IPR022953|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR000023(Phosphofructokinase)|rcsb pdb:4A3S|interpro:IPR035966|ensemblbacteria:BSU_29190(gene)|ensemblbacteria:CAB14879(transcript)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070095"(fructose-6-phosphate binding) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:zZ6zS60M3wAtiodo9AUq8fTer4s224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:19756DB28641F3AB|rigid:3WidvXNWJhHMsdiNAz99RvaaPl4 false - necessary binding region:5-24|necessary binding region:430-520 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q45493 uniprotkb:O31774 intact:EBI-6415229|ensemblbacteria:CAB13326 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rnj1_bacsu(display_long)|uniprotkb:rnjA(gene name)|psi-mi:rnjA(display_short)|uniprotkb:ykqC(gene name synonym)|uniprotkb:BSU14530(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415742|mpidb:MPIDB-INT-1682|imex:IM-18415-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_14530(gene)|ensemblbacteria:CAB13326(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0004534"(5'-3' exoribonuclease activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR001279(Beta-lactamase-like)|interpro:IPR001587(Protein of unknown function UPF0036, conserved site)|interpro:IPR004613(Conserved hypothetical protein MG423)|interpro:IPR011108(RNA-metabolising metallo-beta-lactamase)|interpro:IPR030854|interpro:IPR036866|interpro:IPR041636|interpro:IPR042173|rcsb pdb:3ZQ4|refseq:WP_003245660.1|refseq:NP_389336.1|dip:DIP-46392N ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - crc64:48091B448B8431C9 - figure legend:figure 8|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:dB5Sv6kYkcHiBnhY7DWb0oWx88k224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:EC800C93C301CB1D|rigid:77L11ASGAVylBCNzVYLrnv+3R1E false - necessary binding region:5-24|necessary binding region:430-520 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O31774 uniprotkb:O31774 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0014"(adenylate cyclase complementation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415766|mpidb:MPIDB-INT-1673|imex:IM-18415-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 6|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:562(ecolx)|taxid:562(Escherichia coli) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:F4B53B885CB0873F|rigid:K2PVOIgEmk6hdXZLdAtycJh57TE false strep tag:c-c|sufficient binding region:30-150|sufficient binding region:5-24 3 prime overhang:30-150|strep tag:c-c|sufficient binding region:5-24 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O31774 uniprotkb:O31774 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0071"(molecular sieving) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0903"(mpidb) intact:EBI-6415584|mpidb:MPIDB-INT-1672|imex:IM-18415-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:Figure 3A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:56DC00BB163FB37A|rigid:K2PVOIgEmk6hdXZLdAtycJh57TE false strep tag:c-c strep tag:c-c - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:P37869 uniprotkb:O31774 intact:EBI-6415666|ensemblbacteria:CAB15395|uniprotkb:O32249 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:eno_bacsu(display_long)|uniprotkb:eno(gene name)|psi-mi:eno(display_short)|uniprotkb:2-phospho-D-glycerate hydro-lyase(gene name synonym)|uniprotkb:2-phosphoglycerate dehydratase(gene name synonym)|uniprotkb:BSU33900(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415818|mpidb:MPIDB-INT-1680|imex:IM-18415-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_33900(gene)|ensemblbacteria:CAB15395(transcript)|go:"GO:0000015"(phosphopyruvate hydratase complex)|go:"GO:0004634"(phosphopyruvate hydratase activity)|go:"GO:0005576"(extracellular region)|go:"GO:0006096"(glycolytic process)|go:"GO:0009986"(cell surface)|go:"GO:0030435"(sporulation resulting in formation of a cellular spore)|go:"GO:0032889"(regulation of vacuole fusion, non-autophagic)|go:"GO:0000287"(magnesium ion binding)|interpro:IPR000941(Enolase)|interpro:IPR020809|interpro:IPR020810|interpro:IPR020811|rcsb pdb:4A3R|refseq:NP_391270.1|interpro:IPR036849|refseq:WP_003228333.1|interpro:IPR029017 ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:9PHXZQTr9M4YKgKZcVrQU6vVfoU224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:0639C7229211E2EC|rigid:z0sUxDagQMJzw/hJiuB5Z4R9zKc false flag tag:?-? strep tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P50849 uniprotkb:O31774 intact:EBI-5254714|ensemblbacteria:CAB13542 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:pnp_bacsu(display_long)|uniprotkb:pnp(gene name)|psi-mi:pnp(display_short)|uniprotkb:comR(gene name synonym)|uniprotkb:pnpA(gene name synonym)|uniprotkb:Polynucleotide phosphorylase(gene name synonym)|uniprotkb:Vegetative protein 15(gene name synonym)|uniprotkb:BSU16690(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415808|mpidb:MPIDB-INT-1681|imex:IM-18415-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003231897.1|refseq:NP_389551.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR012162(Polyribonucleotide nucleotidyltransferase)|interpro:IPR015848(Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type)|interpro:IPR003029(S1, RNA binding)|interpro:IPR020568|interpro:IPR022967|interpro:IPR027408|interpro:IPR036345|interpro:IPR036612|ensemblbacteria:BSU_16690(gene)|ensemblbacteria:CAB13542(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000287"(magnesium ion binding)|go:"GO:0003723"(RNA binding)|go:"GO:0004654"(polyribonucleotide nucleotidyltransferase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006396"(RNA processing)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0030420"(establishment of competence for transformation) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:bhR5HtJ6SxWEfPqKT8uxcRUn8S4224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:8EF1A2061D92DA9B|rigid:ecW8qstOQWJQe8XR5fHanNY11vg false flag tag:?-? strep tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q45493 uniprotkb:O31774 intact:EBI-6415229|ensemblbacteria:CAB13326 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:rnj1_bacsu(display_long)|uniprotkb:rnjA(gene name)|psi-mi:rnjA(display_short)|uniprotkb:ykqC(gene name synonym)|uniprotkb:BSU14530(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415858|mpidb:MPIDB-INT-1674|imex:IM-18415-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_14530(gene)|ensemblbacteria:CAB13326(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0004534"(5'-3' exoribonuclease activity)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|go:"GO:0042802"(identical protein binding)|interpro:IPR001279(Beta-lactamase-like)|interpro:IPR001587(Protein of unknown function UPF0036, conserved site)|interpro:IPR004613(Conserved hypothetical protein MG423)|interpro:IPR011108(RNA-metabolising metallo-beta-lactamase)|interpro:IPR030854|interpro:IPR036866|interpro:IPR041636|interpro:IPR042173|rcsb pdb:3ZQ4|refseq:WP_003245660.1|refseq:NP_389336.1|dip:DIP-46392N ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - crc64:48091B448B8431C9 - figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:dB5Sv6kYkcHiBnhY7DWb0oWx88k224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:1CAA642D3A0E0B49|rigid:77L11ASGAVylBCNzVYLrnv+3R1E false flag tag:?-? strep tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:O34529 uniprotkb:O31774 intact:EBI-5250040|ensemblbacteria:CAB14879 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:pfka_bacsu(display_long)|uniprotkb:pfkA(gene name)|psi-mi:pfkA(display_short)|uniprotkb:pfk(gene name synonym)|uniprotkb:Phosphohexokinase(gene name synonym)|uniprotkb:BSU29190(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415828|mpidb:MPIDB-INT-1679|imex:IM-18415-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_003229420.1|refseq:NP_390797.1|interpro:IPR012003(ATP-dependent phosphofructokinase, prokaryotic)|interpro:IPR012828(6-phosphofructokinase)|interpro:IPR022953|interpro:IPR015912(Phosphofructokinase, conserved site)|interpro:IPR000023(Phosphofructokinase)|rcsb pdb:4A3S|interpro:IPR035966|ensemblbacteria:BSU_29190(gene)|ensemblbacteria:CAB14879(transcript)|go:"GO:0003872"(6-phosphofructokinase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005945"(6-phosphofructokinase complex)|go:"GO:0006002"(fructose 6-phosphate metabolic process)|go:"GO:0016208"(AMP binding)|go:"GO:0030388"(fructose 1,6-bisphosphate metabolic process)|go:"GO:0042802"(identical protein binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0048029"(monosaccharide binding)|go:"GO:0061621"(canonical glycolysis)|go:"GO:0070095"(fructose-6-phosphate binding) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:zZ6zS60M3wAtiodo9AUq8fTer4s224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:B513FD1997B22FCC|rigid:3WidvXNWJhHMsdiNAz99RvaaPl4 false flag tag:?-? strep ii tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:O31774 uniprotkb:O31760 intact:EBI-6415578|ensemblbacteria:CAB13569 intact:EBI-6415198|ensemblbacteria:CAB13551 psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:rnj2_bacsu(display_long)|uniprotkb:rnjB(gene name)|psi-mi:rnjB(display_short)|uniprotkb:ymfA(gene name synonym)|uniprotkb:BSU16780(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415848|mpidb:MPIDB-INT-1677|imex:IM-18415-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0006397"(mRNA processing)|go:"GO:0008270"(zinc ion binding)|interpro:IPR001279(Beta-lactamase-like)|interpro:IPR004613(Conserved hypothetical protein MG423)|interpro:IPR011108(RNA-metabolising metallo-beta-lactamase)|interpro:IPR030854|interpro:IPR036866|interpro:IPR041636|interpro:IPR042173|go:"GO:0004534"(5'-3' exoribonuclease activity)|ensemblbacteria:BSU_16780(gene)|ensemblbacteria:CAB13551(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|refseq:WP_003231875.1|refseq:NP_389560.2|dip:DIP-59141N - - crc64:8EA92EE42D51F282 figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 rogid:WTVMqtdHHnVkXBmqWHs1dwj+gCk224308 intact-crc:7A173D1DD09F0079|rigid:QHuicbawhW3eyoy7J10nxy7y0WU false strep tag:c-c flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P96614 uniprotkb:O31774 intact:EBI-6415210|ensemblbacteria:CAB12265|uniprotkb:Q797L0 intact:EBI-6415578|ensemblbacteria:CAB13569 psi-mi:csha_bacsu(display_long)|uniprotkb:cshA(gene name)|psi-mi:cshA(display_short)|uniprotkb:ydbR(gene name synonym)|uniprotkb:BSU04580(locus name) psi-mi:rny_bacsu(display_long)|uniprotkb:rny(gene name)|psi-mi:rny(display_short)|uniprotkb:ymdA(gene name synonym)|uniprotkb:BSU16960(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lehnik-Habrink et al. (2011) pubmed:21803996|imex:IM-18415 taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0903"(mpidb) intact:EBI-6415838|mpidb:MPIDB-INT-1678|imex:IM-18415-13 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:BSU_04580(gene)|ensemblbacteria:CAB12265(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0003723"(RNA binding)|go:"GO:0003724"(RNA helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006401"(RNA catabolic process)|go:"GO:0009409"(response to cold)|go:"GO:0010501"(RNA secondary structure unwinding)|go:"GO:0033592"(RNA strand annealing activity)|go:"GO:0043590"(bacterial nucleoid)|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR030880|interpro:IPR000629(RNA helicase, ATP-dependent, DEAD-box, conserved site)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR011545(DNA/RNA helicase, DEAD/DEAH box type, N-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014014(RNA helicase, DEAD-box type, Q motif)|refseq:NP_388339.1|interpro:IPR027417|refseq:WP_003246685.1 ensemblbacteria:BSU_16960(gene)|ensemblbacteria:CAB13569(transcript)|go:"GO:0003723"(RNA binding)|go:"GO:0004521"(endoribonuclease activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006397"(mRNA processing)|go:"GO:0006402"(mRNA catabolic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR003607(Metal-dependent phosphohydrolase, HD region)|interpro:IPR004087(K Homology)|interpro:IPR004088(K Homology, type 1)|interpro:IPR006674(Metal-dependent phosphohydrolase, HD region, subdomain)|interpro:IPR006675(HDIG)|interpro:IPR017705(Conserved hypothetical protein CHP03319, YmdA/YtgF)|interpro:IPR022711|refseq:NP_389578.1|interpro:IPR036612|refseq:WP_003221010.1|rcsb pdb:6F7T - - - figure legend:figure 7|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:224308(bacsu)|taxid:224308(Bacillus subtilis) - 2012/11/30 2014/10/16 rogid:7wOqzTkjBa3cI6qUIXej5Y1KxNk224308 rogid:ddQ1Jn9z3JreJG515z0BQhanENM224308 intact-crc:43F408414AD16446|rigid:wdeqlImFLMa5AeR1K0XhNDfgDEY false flag tag:?-? strep tag:c-c - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)