#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q8L4M1 uniprotkb:Q9M0V3 intact:EBI-941035|intact:EBI-1632774|uniprotkb:O64576|ensemblplants:AT2G19430.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:thoc6_arath(display_long)|uniprotkb:THO6(gene name)|psi-mi:THO6(display_short)|uniprotkb:DWA1(gene name synonym)|uniprotkb:Protein DWD HYPERSENSITIVE TO ABA 1(gene name synonym)|uniprotkb:THOC6(gene name synonym)|uniprotkb:WD repeat-containing protein DWA1(gene name synonym)|uniprotkb:F27F23.25(orf name)|uniprotkb:At2g19430(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632789|imex:IM-19031-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_849989.1|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR042626|interpro:IPR036322|ensemblplants:AT2G19430(gene)|ensemblplants:AT2G19430.1(transcript)|go:"GO:0000347"(THO complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009788"(negative regulation of abscisic acid-activated signaling pathway)|go:"GO:0010267"(primary ta-siRNA processing)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0051028"(mRNA transport)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:wF2KXtYITri6iTb4Op/w2+zsiV43702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:8A49E05E7C7F0D35|rigid:ymp93LHuF+1YWQRpseLSlD7epAI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O22469 uniprotkb:Q9M0V3 intact:EBI-1632794|uniprotkb:O49612|ensemblplants:AT4G35050.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:msi3_arath(display_long)|uniprotkb:MSI3(gene name)|psi-mi:MSI3(display_short)|uniprotkb:M4E13.110(orf name)|uniprotkb:At4g35050(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632802|imex:IM-19031-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_195231.1|interpro:IPR020472|interpro:IPR022052|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G35050(gene)|ensemblplants:AT4G35050.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:ZNAR2mNc/I4RD7Xy78ukCVPmLpA3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:10ADC27E1FFCEA1E|rigid:EBYvME/Fa+H7r9dTvotYnys/38Q false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q38942 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632807|uniprotkb:Q9SAJ0|uniprotkb:Q1LYY5|ensemblplants:AT1G80670.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:rae1_arath(display_long)|uniprotkb:RAE1(gene name)|psi-mi:RAE1(display_short)|uniprotkb:RNA export factor 1(gene name synonym)|uniprotkb:F23A5.2(orf name)|uniprotkb:At1g80670(locus name) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632814|imex:IM-19031-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 refseq:NP_178182.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|ensemblplants:AT1G80670(gene)|ensemblplants:AT1G80670.1(transcript)|go:"GO:0000972"(transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery)|go:"GO:0003723"(RNA binding)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005643"(nuclear pore)|go:"GO:0005829"(cytosol)|go:"GO:0006405"(RNA export from nucleus)|go:"GO:0015031"(protein transport)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0051028"(mRNA transport)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:+8rkHeNekD9fkJuCtsztC9ifsnw3702 intact-crc:811225E2EC4A0F65|rigid:FG28xNUe8taUxNxL9SlMIaYyoRU false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9SZQ5 uniprotkb:Q9M0V3 intact:EBI-1632819|ensemblplants:AT4G29830.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:vip3_arath(display_long)|uniprotkb:VIP3(gene name)|psi-mi:VIP3(display_short)|uniprotkb:Protein BOUQUET-1(gene name synonym)|uniprotkb:Protein SKI8 homolog(gene name synonym)|uniprotkb:Protein VERNALIZATION INDEPENDENCE 3(gene name synonym)|uniprotkb:Protein ZWERGERL(gene name synonym)|uniprotkb:SKI8(gene name synonym)|uniprotkb:F27B13.70(orf name)|uniprotkb:At4g29830(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632827|imex:IM-19031-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR024977|refseq:NP_194712.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G29830(gene)|ensemblplants:AT4G29830.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009908"(flower development)|go:"GO:0009910"(negative regulation of flower development)|go:"GO:0010452"(histone H3-K36 methylation)|go:"GO:0016441"(posttranscriptional gene silencing)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|go:"GO:1904278"(positive regulation of wax biosynthetic process) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:5DLIqB7pkkrrToVfe/ViUUVg/I43702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:7E2D726EEC6A2A05|rigid:GgkAYpsi1m6+wK0ENQLFB0bi79s false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q38884 uniprotkb:Q9M0V3 intact:EBI-1632832|uniprotkb:O82342|uniprotkb:Q94K09|uniprotkb:Q9C5Z0|ensemblplants:AT2G46280.1|ensemblplants:AT2G46280.2 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:eif3i_arath(display_long)|uniprotkb:TIF3I1(gene name)|psi-mi:TIF3I1(display_short)|uniprotkb:T3F17.7(orf name)|uniprotkb:At2g46280(locus name)|uniprotkb:Eukaryotic translation initiation factor 3 subunit 2(gene name synonym)|uniprotkb:eIF-3-beta(gene name synonym)|uniprotkb:eIF3 p36(gene name synonym)|uniprotkb:TGF-beta receptor-interacting protein 1(gene name synonym) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632846|imex:IM-19031-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027525|refseq:NP_182151.1|refseq:NP_850450.1|interpro:IPR020472|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|interpro:IPR015943(WD40/YVTN repeat-like)|ensemblplants:AT2G46280(gene)|ensemblplants:AT2G46280.2(transcript)|go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0002183"(cytoplasmic translational initiation)|go:"GO:0003723"(RNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005829"(cytosol)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0071541"(eukaryotic translation initiation factor 3 complex, eIF3m)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|ensemblplants:AT2G46280.1(transcript) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:OjH87ZPBEW37JSxbbaHBtclRXcQ3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:65D4698796A79F1D|rigid:Q8ddv8g6SvIsn2Ty4kEYNM/l1Y8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:P49177 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632851|ensemblplants:AT4G34460.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:gbb_arath(display_long)|uniprotkb:GB1(gene name)|psi-mi:GB1(display_short)|uniprotkb:T4L20.40(orf name)|uniprotkb:At4g34460(locus name)|uniprotkb:transducin(gene name synonym)|uniprotkb:AGB1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632863|imex:IM-19031-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 dip:DIP-40108N|refseq:NP_195172.1|ensemblplants:AT4G34460(gene)|ensemblplants:AT4G34460.1(transcript)|go:"GO:0003924"(GTPase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005783"(endoplasmic reticulum)|go:"GO:0005834"(heterotrimeric G-protein complex)|go:"GO:0005886"(plasma membrane)|go:"GO:0007186"(G protein-coupled receptor signaling pathway)|go:"GO:0009723"(response to ethylene)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009845"(seed germination)|go:"GO:0009867"(jasmonic acid mediated signaling pathway)|go:"GO:0009991"(response to extracellular stimulus)|go:"GO:0010118"(stomatal movement)|go:"GO:0010154"(fruit development)|go:"GO:0030968"(endoplasmic reticulum unfolded protein response)|go:"GO:0031682"(G-protein gamma-subunit binding)|go:"GO:0048364"(root development)|go:"GO:0048527"(lateral root development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0072593"(reactive oxygen species metabolic process)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|go:"GO:1905392"(plant organ morphogenesis)|go:"GO:2000280"(regulation of root development)|interpro:IPR001632(G-protein, beta subunit)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR016346(Guanine nucleotide-binding protein, beta subunit)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:WstY3eSNpOHBxk7+tDfYLgm3J3A3702 intact-crc:13BDB04AD6331F4D|rigid:2eHk06HyHSo2ITMx7Za0UdxlOHA false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q8H177 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632868 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:q8h177_arath(display_long)|uniprotkb:At1g65030(locus name) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632874|imex:IM-19031-7 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:u4PKfuQSGWaf11t7QkpAqYwWfl03702 intact-crc:9D7F9338E1107B30|rigid:lYGxv0/qsATjUqScckjIjaytGXI false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q8W4D9 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632879 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:q8w4d9_arath(display_long)|uniprotkb:F20O9.130(gene name)|psi-mi:F20O9.130(display_short)|uniprotkb:WD repeat and SOF domain-containing protein 1(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632886|imex:IM-19031-8 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 interpro:IPR020472|interpro:IPR007287(Sof1-like protein)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR013979(Eukaryotic translation initiation factor 2A, central region)|interpro:IPR036322|go:"GO:0005730"(nucleolus)|go:"GO:0016567"(protein ubiquitination) - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:uhtt5dw/UcFsnBv/Czmni45LRqk3702 intact-crc:2E8FAC38ED04E501|rigid:9m0YrNzMGwPUXUMoxhBga6j27BY false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q9M1E5 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632891|ensemblplants:AT3G45620.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:q9m1e5_arath(display_long)|uniprotkb:F9K21.200(gene name)|psi-mi:F9K21.200(display_short)|uniprotkb:At3g45620/F9K21_200(locus name)|uniprotkb:At3g45620(locus name) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632903|imex:IM-19031-9 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 refseq:NP_190148.1|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|ensemblplants:AT3G45620(gene)|ensemblplants:AT3G45620.1(transcript) - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:5M8uy0U/j5iPNYtlR8JDDG5Y1eM3702 intact-crc:6197221E5F28A9E3|rigid:QQo/H01LqfxWNIkKuqh+LSwM8aQ false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q6NLV4 uniprotkb:Q9M0V3 intact:EBI-1632908|uniprotkb:Q9FY53|ensemblplants:AT5G13480.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:fy_arath(display_long)|uniprotkb:FY(gene name)|psi-mi:FY(display_short)|uniprotkb:T6I14.10(orf name)|uniprotkb:At5g13480(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632913|imex:IM-19031-10 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40405N|refseq:NP_196852.3|ensemblplants:AT5G13480(gene)|ensemblplants:AT5G13480.1(transcript)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0009908"(flower development)|go:"GO:0030154"(cell differentiation)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322 dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:C2M6JxHZ0ajbrY2ceVFx8BzxGLo3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:C6B74FB5E4D5257C|rigid:0AFl72hR419ZuNM4SU2PkoECaHE false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q42384 uniprotkb:Q9M0V3 intact:EBI-1382964|ensemblplants:AT4G15900.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:prl1_arath(display_long)|uniprotkb:PRL1(gene name)|psi-mi:PRL1(display_short)|uniprotkb:At4g15900(locus name)|uniprotkb:dl3990w(orf name)|uniprotkb:MAC2(gene name synonym)|uniprotkb:MOS4-associated complex protein 2(gene name synonym)|uniprotkb:FCAALL.40(orf name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632919|imex:IM-19031-11 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_193325.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G15900(gene)|ensemblplants:AT4G15900.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0009749"(response to glucose)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048825"(cotyledon development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:DHIuqlSZSCA6gIlKWKGheBqJCxA3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:572708716A5A13D6|rigid:K2opesmaNT5vXn46u48wBKKrEqw false mutation decreasing interaction:332-332,290-290 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0018"(two hybrid) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632939|imex:IM-19031-12 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:42956D97C1B52B05|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false - - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:Q9M0V3 uniprotkb:Q6NLV4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632908|uniprotkb:Q9FY53|ensemblplants:AT5G13480.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:fy_arath(display_long)|uniprotkb:FY(gene name)|psi-mi:FY(display_short)|uniprotkb:T6I14.10(orf name)|uniprotkb:At5g13480(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632967|imex:IM-19031-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 dip:DIP-40405N|refseq:NP_196852.3|ensemblplants:AT5G13480(gene)|ensemblplants:AT5G13480.1(transcript)|go:"GO:0005847"(mRNA cleavage and polyadenylation specificity factor complex)|go:"GO:0006378"(mRNA polyadenylation)|go:"GO:0009908"(flower development)|go:"GO:0030154"(cell differentiation)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322 - - - figure legend:Figure 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:C2M6JxHZ0ajbrY2ceVFx8BzxGLo3702 intact-crc:DF9FCFC7A7DA8914|rigid:mD5+9+u6CR5IxBeYbhN92TsoBKU false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632967|imex:IM-19031-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:DF9FCFC7A7DA8914|rigid:mD5+9+u6CR5IxBeYbhN92TsoBKU false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M0V3 uniprotkb:Q38884 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632832|uniprotkb:O82342|uniprotkb:Q94K09|uniprotkb:Q9C5Z0|ensemblplants:AT2G46280.1|ensemblplants:AT2G46280.2 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:eif3i_arath(display_long)|uniprotkb:TIF3I1(gene name)|psi-mi:TIF3I1(display_short)|uniprotkb:T3F17.7(orf name)|uniprotkb:At2g46280(locus name)|uniprotkb:Eukaryotic translation initiation factor 3 subunit 2(gene name synonym)|uniprotkb:eIF-3-beta(gene name synonym)|uniprotkb:eIF3 p36(gene name synonym)|uniprotkb:TGF-beta receptor-interacting protein 1(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632967|imex:IM-19031-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 interpro:IPR027525|refseq:NP_182151.1|refseq:NP_850450.1|interpro:IPR020472|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|interpro:IPR015943(WD40/YVTN repeat-like)|ensemblplants:AT2G46280(gene)|ensemblplants:AT2G46280.2(transcript)|go:"GO:0001732"(formation of cytoplasmic translation initiation complex)|go:"GO:0002183"(cytoplasmic translational initiation)|go:"GO:0003723"(RNA binding)|go:"GO:0003743"(translation initiation factor activity)|go:"GO:0005829"(cytosol)|go:"GO:0016282"(eukaryotic 43S preinitiation complex)|go:"GO:0033290"(eukaryotic 48S preinitiation complex)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0071541"(eukaryotic translation initiation factor 3 complex, eIF3m)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|ensemblplants:AT2G46280.1(transcript) - - - figure legend:Figure 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:OjH87ZPBEW37JSxbbaHBtclRXcQ3702 intact-crc:DF9FCFC7A7DA8914|rigid:mD5+9+u6CR5IxBeYbhN92TsoBKU false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M0V3 uniprotkb:Q42384 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1382964|ensemblplants:AT4G15900.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:prl1_arath(display_long)|uniprotkb:PRL1(gene name)|psi-mi:PRL1(display_short)|uniprotkb:At4g15900(locus name)|uniprotkb:dl3990w(orf name)|uniprotkb:MAC2(gene name synonym)|uniprotkb:MOS4-associated complex protein 2(gene name synonym)|uniprotkb:FCAALL.40(orf name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632967|imex:IM-19031-13 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 refseq:NP_193325.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G15900(gene)|ensemblplants:AT4G15900.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0009749"(response to glucose)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048825"(cotyledon development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Figure 4A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:DHIuqlSZSCA6gIlKWKGheBqJCxA3702 intact-crc:DF9FCFC7A7DA8914|rigid:mD5+9+u6CR5IxBeYbhN92TsoBKU false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M0V3 uniprotkb:Q8LGH4 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632974|imex:IM-19031-14 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 5A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:0C58556A3269A21E|rigid:AECC7iEhOo2e4vvyaX7yISdBWa8 false flag tag:?-? - - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q42384 uniprotkb:Q8LGH4 intact:EBI-1382964|ensemblplants:AT4G15900.1 intact:EBI-541750|uniprotkb:Q84LL5|uniprotkb:Q8RWT9|uniprotkb:Q9FGP0|ensemblplants:AT5G46210.1 psi-mi:prl1_arath(display_long)|uniprotkb:PRL1(gene name)|psi-mi:PRL1(display_short)|uniprotkb:At4g15900(locus name)|uniprotkb:dl3990w(orf name)|uniprotkb:MAC2(gene name synonym)|uniprotkb:MOS4-associated complex protein 2(gene name synonym)|uniprotkb:FCAALL.40(orf name) psi-mi:cul4_arath(display_long)|uniprotkb:CUL4(gene name)|psi-mi:CUL4(display_short)|uniprotkb:MDE13.3(orf name)|uniprotkb:At5g46210(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1632982|imex:IM-19031-15 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_193325.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G15900(gene)|ensemblplants:AT4G15900.1(transcript)|go:"GO:0000398"(mRNA splicing, via spliceosome)|go:"GO:0000974"(Prp19 complex)|go:"GO:0002758"(innate immune response-activating signal transduction)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006508"(proteolysis)|go:"GO:0009749"(response to glucose)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0042742"(defense response to bacterium)|go:"GO:0045087"(innate immune response)|go:"GO:0045892"(negative regulation of transcription, DNA-templated)|go:"GO:0048364"(root development)|go:"GO:0048366"(leaf development)|go:"GO:0048825"(cotyledon development)|go:"GO:0050832"(defense response to fungus)|go:"GO:0071013"(catalytic step 2 spliceosome)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) ensemblplants:AT5G46210(gene)|ensemblplants:AT5G46210.1(transcript)|go:"GO:0000151"(ubiquitin ligase complex)|go:"GO:0000209"(protein polyubiquitination)|go:"GO:0004842"(ubiquitin-protein transferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0009640"(photomorphogenesis)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009755"(hormone-mediated signaling pathway)|go:"GO:0009908"(flower development)|go:"GO:0010100"(negative regulation of photomorphogenesis)|go:"GO:0010154"(fruit development)|go:"GO:0010182"(sugar mediated signaling pathway)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031461"(cullin-RING ubiquitin ligase complex)|go:"GO:0031625"(ubiquitin protein ligase binding)|go:"GO:0048366"(leaf development)|go:"GO:0048367"(shoot system development)|go:"GO:0048575"(short-day photoperiodism, flowering)|go:"GO:0048825"(cotyledon development)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR001373(Cullin, N-terminal region)|interpro:IPR016157(Cullin, conserved site)|interpro:IPR016158(Cullin homology)|interpro:IPR016159(Cullin repeat-like)|interpro:IPR019559|interpro:IPR036317|interpro:IPR036388|interpro:IPR036390|refseq:NP_568658.1|dip:DIP-40462N - - - figure legend:Figure 4B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:DHIuqlSZSCA6gIlKWKGheBqJCxA3702 rogid:O9B6m/bQ7Ki5eWj9TRPLl+kkdNU3702 intact-crc:B6080CD58BFD7BE9|rigid:S6YHeNKdmgKimU6l/O6Wz81CqIg false - flag tag:?-? - - psi-mi:"MI:0113"(western blot) psi-mi:"MI:0113"(western blot) uniprotkb:Q9M1E5 uniprotkb:Q9M0V3 intact:EBI-1632891|ensemblplants:AT3G45620.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:q9m1e5_arath(display_long)|uniprotkb:F9K21.200(gene name)|psi-mi:F9K21.200(display_short)|uniprotkb:At3g45620/F9K21_200(locus name)|uniprotkb:At3g45620(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1633002|imex:IM-19031-16 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_190148.1|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322|ensemblplants:AT3G45620(gene)|ensemblplants:AT3G45620.1(transcript) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:5M8uy0U/j5iPNYtlR8JDDG5Y1eM3702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:988E22339F8AF075|rigid:QQo/H01LqfxWNIkKuqh+LSwM8aQ false myc tag:?-? flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9M0V3 uniprotkb:O22469 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 intact:EBI-1632794|uniprotkb:O49612|ensemblplants:AT4G35050.1 psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:msi3_arath(display_long)|uniprotkb:MSI3(gene name)|psi-mi:MSI3(display_short)|uniprotkb:M4E13.110(orf name)|uniprotkb:At4g35050(locus name) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1633011|imex:IM-19031-17 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 refseq:NP_195231.1|interpro:IPR020472|interpro:IPR022052|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G35050(gene)|ensemblplants:AT4G35050.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) - - - figure legend:Figure 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 rogid:ZNAR2mNc/I4RD7Xy78ukCVPmLpA3702 intact-crc:45E6122ADC2A35E7|rigid:EBYvME/Fa+H7r9dTvotYnys/38Q false flag tag:?-? myc tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8H177 uniprotkb:Q9M0V3 intact:EBI-1632868 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:q8h177_arath(display_long)|uniprotkb:At1g65030(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1633020|imex:IM-19031-18 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR036322 dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:u4PKfuQSGWaf11t7QkpAqYwWfl03702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:E66A70C0D69A9364|rigid:lYGxv0/qsATjUqScckjIjaytGXI false myc tag:?-? flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q9SZQ5 uniprotkb:Q9M0V3 intact:EBI-1632819|ensemblplants:AT4G29830.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:vip3_arath(display_long)|uniprotkb:VIP3(gene name)|psi-mi:VIP3(display_short)|uniprotkb:Protein BOUQUET-1(gene name synonym)|uniprotkb:Protein SKI8 homolog(gene name synonym)|uniprotkb:Protein VERNALIZATION INDEPENDENCE 3(gene name synonym)|uniprotkb:Protein ZWERGERL(gene name synonym)|uniprotkb:SKI8(gene name synonym)|uniprotkb:F27B13.70(orf name)|uniprotkb:At4g29830(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1633029|imex:IM-19031-19 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR024977|refseq:NP_194712.1|interpro:IPR020472|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR019775|interpro:IPR036322|ensemblplants:AT4G29830(gene)|ensemblplants:AT4G29830.1(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009908"(flower development)|go:"GO:0009910"(negative regulation of flower development)|go:"GO:0010452"(histone H3-K36 methylation)|go:"GO:0016441"(posttranscriptional gene silencing)|go:"GO:0016593"(Cdc73/Paf1 complex)|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|go:"GO:1904278"(positive regulation of wax biosynthetic process) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:5DLIqB7pkkrrToVfe/ViUUVg/I43702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:481C186659525F66|rigid:GgkAYpsi1m6+wK0ENQLFB0bi79s false myc tag:?-? flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q8L4M1 uniprotkb:Q9M0V3 intact:EBI-941035|intact:EBI-1632774|uniprotkb:O64576|ensemblplants:AT2G19430.1 intact:EBI-1632780|uniprotkb:Q8VY31|uniprotkb:Q0WL42|ensemblplants:AT4G05420.1 psi-mi:thoc6_arath(display_long)|uniprotkb:THO6(gene name)|psi-mi:THO6(display_short)|uniprotkb:DWA1(gene name synonym)|uniprotkb:Protein DWD HYPERSENSITIVE TO ABA 1(gene name synonym)|uniprotkb:THOC6(gene name synonym)|uniprotkb:WD repeat-containing protein DWA1(gene name synonym)|uniprotkb:F27F23.25(orf name)|uniprotkb:At2g19430(locus name) psi-mi:ddb1a_arath(display_long)|uniprotkb:DDB1A(gene name)|psi-mi:DDB1A(display_short)|uniprotkb:C6L9.100(orf name)|uniprotkb:At4g05420(locus name)|uniprotkb:UV-damaged DNA-binding protein 1a(gene name synonym) psi-mi:"MI:0007"(anti tag coimmunoprecipitation) Lee et al. (2008) pubmed:18223036|imex:IM-19031 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1633038|imex:IM-19031-20 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_849989.1|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR001680(WD40 repeat)|interpro:IPR042626|interpro:IPR036322|ensemblplants:AT2G19430(gene)|ensemblplants:AT2G19430.1(transcript)|go:"GO:0000347"(THO complex)|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005739"(mitochondrion)|go:"GO:0006397"(mRNA processing)|go:"GO:0008380"(RNA splicing)|go:"GO:0009738"(abscisic acid-activated signaling pathway)|go:"GO:0009788"(negative regulation of abscisic acid-activated signaling pathway)|go:"GO:0010267"(primary ta-siRNA processing)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0031047"(gene silencing by RNA)|go:"GO:0051028"(mRNA transport)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex) dip:DIP-40455N|refseq:NP_192451.1|ensemblplants:AT4G05420(gene)|ensemblplants:AT4G05420.1(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0006281"(DNA repair)|go:"GO:0009585"(red, far-red light phototransduction)|go:"GO:0016567"(protein ubiquitination)|go:"GO:0080008"(Cul4-RING E3 ubiquitin ligase complex)|interpro:IPR004871(Cleavage and polyadenylation specificity factor, A subunit, C-terminal)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR018846|interpro:IPR036322 - - - figure legend:Figure 5B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") - 2008/02/04 2014/10/16 rogid:wF2KXtYITri6iTb4Op/w2+zsiV43702 rogid:IUNa3XV95j+C213M4Nj2AuUtt6M3702 intact-crc:36F09E50A05AE87F|rigid:ymp93LHuF+1YWQRpseLSlD7epAI false myc tag:?-? flag tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot)