#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q9ZVT7 uniprotkb:A2RVK7 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580441|ensemblplants:AT4G27490.1|ensemblplants:AT4G27490.3|ensemblplants:AT4G27490.4|uniprotkb:Q8GWJ0|uniprotkb:Q9SZS4 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:rp41l_arath(display_long)|uniprotkb:RRP41L(gene name)|psi-mi:RRP41L(display_short)|uniprotkb:Protein SLOWER GROWTH(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 41-like(gene name synonym)|uniprotkb:SLG(gene name synonym)|uniprotkb:F27G19.90(orf name)|uniprotkb:At4g27490(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT4G27490(gene)|ensemblplants:AT4G27490.1(transcript)|ensemblplants:AT4G27490.3(transcript)|ensemblplants:AT4G27490.4(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008408"(3'-5' exonuclease activity)|go:"GO:0009845"(seed germination)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|go:"GO:0090351"(seedling development)|interpro:IPR027408|refseq:NP_001320075.1|refseq:NP_001328238.1|refseq:NP_001328241.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:TFzGRP0Er56x6ujdJQDwir7tOZQ3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q9LX74 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580430|ensemblplants:AT3G46210.1|ensemblplants:AT3G46210.2|ensemblplants:AT3G46210.3|ensemblplants:AT3G46210.4|ensemblplants:AT3G46210.5|ensemblplants:AT3G46210.6|ensemblplants:AT3G46210.7 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:exos5_arath(display_long)|uniprotkb:RRP46(gene name)|psi-mi:RRP46(display_short)|uniprotkb:Exosome component 5(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 46(gene name synonym)|uniprotkb:F12M12.180(orf name)|uniprotkb:At3g46210(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 refseq:NP_001030817.1|refseq:NP_001030818.1|refseq:NP_001030819.1|refseq:NP_001078250.1|refseq:NP_001190019.1|refseq:NP_190207.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR020568|ensemblplants:AT3G46210(gene)|ensemblplants:AT3G46210.1(transcript)|ensemblplants:AT3G46210.2(transcript)|ensemblplants:AT3G46210.3(transcript)|ensemblplants:AT3G46210.4(transcript)|ensemblplants:AT3G46210.5(transcript)|ensemblplants:AT3G46210.6(transcript)|ensemblplants:AT3G46210.7(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0004527"(exonuclease activity)|go:"GO:0004536"(deoxyribonuclease activity)|go:"GO:0004540"(ribonuclease activity)|go:"GO:0005730"(nucleolus)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042802"(identical protein binding)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR027408|refseq:NP_001325681.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:UXgDGzTeCIDG4fb6DqlDLpDuAm03702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q9M209 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580408|ensemblplants:AT3G60500.1|ensemblplants:AT3G60500.2|ensemblplants:AT3G60500.3 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:cer7_arath(display_long)|uniprotkb:RRP45B(gene name)|psi-mi:RRP45B(display_short)|uniprotkb:CER7(gene name synonym)|uniprotkb:Protein ECERIFERUM 7(gene name synonym)|uniprotkb:RNA-processing protein CER7(gene name synonym)|uniprotkb:RRP45 homolog B(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 45B(gene name synonym)|uniprotkb:T8B10.160(orf name)|uniprotkb:At3g60500(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 refseq:NP_001190143.1|refseq:NP_191609.1|refseq:NP_974466.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR033100|ensemblplants:AT3G60500(gene)|ensemblplants:AT3G60500.1(transcript)|ensemblplants:AT3G60500.2(transcript)|ensemblplants:AT3G60500.3(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071028"(nuclear mRNA surveillance)|interpro:IPR027408|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:QwK8VL5VWvKgtfBllssmWdTsIrU3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q9ZUI4 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580386|ensemblplants:AT1G60080.1 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:q9zui4_arath(display_long)|uniprotkb:T2K10.14(orf name)|uniprotkb:T2K10_14(orf name)|uniprotkb:At1g60080(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 refseq:NP_176216.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT1G60080(gene)|ensemblplants:AT1G60080.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005829"(cytosol)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR027408|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:r/2bJOhJ60DnygdfoChyWc+ZCFs3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q9FPI0 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580375|ensemblplants:AT3G07750.1|ensemblplants:AT3G07750.2 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:q9fpi0_arath(display_long)|uniprotkb:MLP3.20(gene name)|psi-mi:MLP3.20(display_short)|uniprotkb:At3g07750(locus name)|uniprotkb:At3g07750/F17A17_9(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 refseq:NP_566318.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G07750(gene)|ensemblplants:AT3G07750.1(transcript)|ensemblplants:AT3G07750.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR027408|refseq:NP_001319497.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:VLKJt4YKfTxbuIfuk+2rOFcSqFw3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q9SP08 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q8GXX9 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580357|ensemblplants:AT5G38890.1 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:q8gxx9_arath(display_long)|uniprotkb:At5g38885/At5g38890(locus name)|uniprotkb:At5g38890(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 ensemblplants:AT5G38890(gene)|ensemblplants:AT5G38890.1(transcript)|go:"GO:0005737"(cytoplasm)|interpro:IPR025721 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:AQW5aV1ag9Or1OfcmNKRPlpydyM3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9ZVT7 uniprotkb:Q94AW9 intact:EBI-1580339|ensemblplants:AT1G03360.1 intact:EBI-1580350|ensemblplants:AT2G25355.1 psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:q94aw9_arath(display_long)|uniprotkb:At2g25355(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580346|imex:IM-11983-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 interpro:IPR026699|interpro:IPR004088(K Homology, type 1)|refseq:NP_565592.1|ensemblplants:AT2G25355(gene)|ensemblplants:AT2G25355.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR036612|interpro:IPR037319 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 rogid:la5gs+SEDlmsC57EP0oJtXMyoBk3702 intact-crc:2BD028C3E5AD60A1|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q9LX74 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580430|ensemblplants:AT3G46210.1|ensemblplants:AT3G46210.2|ensemblplants:AT3G46210.3|ensemblplants:AT3G46210.4|ensemblplants:AT3G46210.5|ensemblplants:AT3G46210.6|ensemblplants:AT3G46210.7 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:exos5_arath(display_long)|uniprotkb:RRP46(gene name)|psi-mi:RRP46(display_short)|uniprotkb:Exosome component 5(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 46(gene name synonym)|uniprotkb:F12M12.180(orf name)|uniprotkb:At3g46210(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 refseq:NP_001030817.1|refseq:NP_001030818.1|refseq:NP_001030819.1|refseq:NP_001078250.1|refseq:NP_001190019.1|refseq:NP_190207.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR020568|ensemblplants:AT3G46210(gene)|ensemblplants:AT3G46210.1(transcript)|ensemblplants:AT3G46210.2(transcript)|ensemblplants:AT3G46210.3(transcript)|ensemblplants:AT3G46210.4(transcript)|ensemblplants:AT3G46210.5(transcript)|ensemblplants:AT3G46210.6(transcript)|ensemblplants:AT3G46210.7(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003690"(double-stranded DNA binding)|go:"GO:0003727"(single-stranded RNA binding)|go:"GO:0004527"(exonuclease activity)|go:"GO:0004536"(deoxyribonuclease activity)|go:"GO:0004540"(ribonuclease activity)|go:"GO:0005730"(nucleolus)|go:"GO:0005840"(ribosome)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0042802"(identical protein binding)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR027408|refseq:NP_001325681.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:UXgDGzTeCIDG4fb6DqlDLpDuAm03702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q8GXX9 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580357|ensemblplants:AT5G38890.1 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:q8gxx9_arath(display_long)|uniprotkb:At5g38885/At5g38890(locus name)|uniprotkb:At5g38890(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 ensemblplants:AT5G38890(gene)|ensemblplants:AT5G38890.1(transcript)|go:"GO:0005737"(cytoplasm)|interpro:IPR025721 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:AQW5aV1ag9Or1OfcmNKRPlpydyM3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q9FPI0 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580375|ensemblplants:AT3G07750.1|ensemblplants:AT3G07750.2 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:q9fpi0_arath(display_long)|uniprotkb:MLP3.20(gene name)|psi-mi:MLP3.20(display_short)|uniprotkb:At3g07750(locus name)|uniprotkb:At3g07750/F17A17_9(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 refseq:NP_566318.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G07750(gene)|ensemblplants:AT3G07750.1(transcript)|ensemblplants:AT3G07750.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR027408|refseq:NP_001319497.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:VLKJt4YKfTxbuIfuk+2rOFcSqFw3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:A2RVK7 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580441|ensemblplants:AT4G27490.1|ensemblplants:AT4G27490.3|ensemblplants:AT4G27490.4|uniprotkb:Q8GWJ0|uniprotkb:Q9SZS4 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:rp41l_arath(display_long)|uniprotkb:RRP41L(gene name)|psi-mi:RRP41L(display_short)|uniprotkb:Protein SLOWER GROWTH(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 41-like(gene name synonym)|uniprotkb:SLG(gene name synonym)|uniprotkb:F27G19.90(orf name)|uniprotkb:At4g27490(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT4G27490(gene)|ensemblplants:AT4G27490.1(transcript)|ensemblplants:AT4G27490.3(transcript)|ensemblplants:AT4G27490.4(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006364"(rRNA processing)|go:"GO:0008408"(3'-5' exonuclease activity)|go:"GO:0009845"(seed germination)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|go:"GO:0090351"(seedling development)|interpro:IPR027408|refseq:NP_001320075.1|refseq:NP_001328238.1|refseq:NP_001328241.1|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:TFzGRP0Er56x6ujdJQDwir7tOZQ3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q9M209 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580408|ensemblplants:AT3G60500.1|ensemblplants:AT3G60500.2|ensemblplants:AT3G60500.3 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:cer7_arath(display_long)|uniprotkb:RRP45B(gene name)|psi-mi:RRP45B(display_short)|uniprotkb:CER7(gene name synonym)|uniprotkb:Protein ECERIFERUM 7(gene name synonym)|uniprotkb:RNA-processing protein CER7(gene name synonym)|uniprotkb:RRP45 homolog B(gene name synonym)|uniprotkb:Ribosomal RNA-processing protein 45B(gene name synonym)|uniprotkb:T8B10.160(orf name)|uniprotkb:At3g60500(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 refseq:NP_001190143.1|refseq:NP_191609.1|refseq:NP_974466.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|interpro:IPR033100|ensemblplants:AT3G60500(gene)|ensemblplants:AT3G60500.1(transcript)|ensemblplants:AT3G60500.2(transcript)|ensemblplants:AT3G60500.3(transcript)|go:"GO:0000175"(3'-5'-exoribonuclease activity)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|go:"GO:0071028"(nuclear mRNA surveillance)|interpro:IPR027408|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:QwK8VL5VWvKgtfBllssmWdTsIrU3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q94AW9 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580350|ensemblplants:AT2G25355.1 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:q94aw9_arath(display_long)|uniprotkb:At2g25355(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 interpro:IPR026699|interpro:IPR004088(K Homology, type 1)|refseq:NP_565592.1|ensemblplants:AT2G25355(gene)|ensemblplants:AT2G25355.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR036612|interpro:IPR037319 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:la5gs+SEDlmsC57EP0oJtXMyoBk3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q9ZUI4 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580386|ensemblplants:AT1G60080.1 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:q9zui4_arath(display_long)|uniprotkb:T2K10.14(orf name)|uniprotkb:T2K10_14(orf name)|uniprotkb:At1g60080(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 refseq:NP_176216.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT1G60080(gene)|ensemblplants:AT1G60080.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0005829"(cytosol)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034473"(U1 snRNA 3'-end processing)|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0034476"(U5 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071042"(nuclear polyadenylation-dependent mRNA catabolic process)|interpro:IPR027408|interpro:IPR036345 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:r/2bJOhJ60DnygdfoChyWc+ZCFs3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:Q9SP08 uniprotkb:Q9ZVT7 intact:EBI-1580361|ensemblplants:AT3G61620.1|ensemblplants:AT3G61620.2 intact:EBI-1580339|ensemblplants:AT1G03360.1 psi-mi:rrp41_arath(display_long)|uniprotkb:RRP41(gene name)|psi-mi:RRP41(display_short)|uniprotkb:Ribosomal RNA-processing protein 41(gene name synonym)|uniprotkb:F15G16.10(orf name)|uniprotkb:At3g61620(locus name) psi-mi:rrp4_arath(display_long)|uniprotkb:RRP4(gene name)|psi-mi:RRP4(display_short)|uniprotkb:Ribosomal RNA-processing protein 4(gene name synonym)|uniprotkb:F15K9.4(orf name)|uniprotkb:At1g03360(locus name) psi-mi:"MI:0676"(tandem affinity purification) Chekanova et al. (2007) imex:IM-11983|pubmed:18160042 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1580456|imex:IM-11983-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027408|refseq:NP_001118878.1|refseq:NP_191721.1|interpro:IPR001247(Exoribonuclease, phosphorolytic domain 1)|interpro:IPR015847(Exoribonuclease, phosphorolytic domain 2)|interpro:IPR020568|ensemblplants:AT3G61620(gene)|ensemblplants:AT3G61620.1(transcript)|ensemblplants:AT3G61620.2(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0003723"(RNA binding)|go:"GO:0005730"(nucleolus)|go:"GO:0005829"(cytosol)|go:"GO:0006364"(rRNA processing)|go:"GO:0016075"(rRNA catabolic process)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0071028"(nuclear mRNA surveillance)|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036345 interpro:IPR026699|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR004088(K Homology, type 1)|refseq:NP_171835.1|interpro:IPR022967|ensemblplants:AT1G03360(gene)|ensemblplants:AT1G03360.1(transcript)|go:"GO:0000176"("nuclear exosome (RNase complex)")|go:"GO:0000177"("cytoplasmic exosome (RNase complex)")|go:"GO:0000178"("exosome (RNase complex)")|go:"GO:0000460"(maturation of 5.8S rRNA)|go:"GO:0000467"("exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)")|go:"GO:0003723"(RNA binding)|go:"GO:0005654"(nucleoplasm)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0034427"(nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5')|go:"GO:0034475"(U4 snRNA 3'-end processing)|go:"GO:0043928"(exonucleolytic catabolism of deadenylated mRNA)|go:"GO:0060149"(negative regulation of posttranscriptional gene silencing)|go:"GO:0071034"(CUT catabolic process)|go:"GO:0071035"(nuclear polyadenylation-dependent rRNA catabolic process)|go:"GO:0071038"(nuclear polyadenylation-dependent tRNA catabolic process)|go:"GO:0071049"|go:"GO:0071051"(polyadenylation-dependent snoRNA 3'-end processing)|interpro:IPR036612 psi-mi:"MI:0469"(intact) - - figure legend:1 A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/01/15 2014/10/16 rogid:gHMsIJdnq4wKfP45Xz6x+wpT6Us3702 rogid:+Neo6n5r7qqtgEQqRdwhm/8QA8s3702 intact-crc:78148D8F75549E8A|rigid:VXBhD08mk8Uf4B3zj9HCgU7dP9w false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry)