#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B chebi:"CHEBI:28765" uniprotkb:Q5W7F2 intact:EBI-1750245 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 psi-mi:pip(display_short)|psi-mi:"CHEBI:28765"(display_long) psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:"MI:0047"(far western blotting) Koizumi et al. (2005) pubmed:15743878|imex:IM-18932 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-1750266|imex:IM-18932-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 - comment:phosphatidylinositol - figure legend:Figure 5C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/04/03 2014/10/16 - rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 intact-crc:4DCB5866CF4031B5 false - glutathione s tranferase tag:?-? - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) chebi:"CHEBI:28910" uniprotkb:Q5W7F2 intact:EBI-1750248 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 psi-mi:1-phosphatidyl-myo-inositol 4,5-bisphosphate(display_short)|psi-mi:"CHEBI:28910"(display_long) psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:"MI:0047"(far western blotting) Koizumi et al. (2005) pubmed:15743878|imex:IM-18932 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-1750281|imex:IM-18932-4 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 - - - figure legend:Figure 5C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/04/03 2014/10/16 - rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 intact-crc:C3A000A39FF880E9 false - glutathione s tranferase tag:?-? - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) chebi:"CHEBI:37530" uniprotkb:Q5W7F2 intact:EBI-1750257 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 psi-mi:phosphatidylinositol 4-phosphates(display_short)|psi-mi:"CHEBI:37530"(display_long) psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:"MI:0047"(far western blotting) Koizumi et al. (2005) pubmed:15743878|imex:IM-18932 taxid:-2(chemical synthesis)|taxid:-2("Chemical synthesis (Chemical synthesis)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0407"(direct interaction) psi-mi:"MI:0469"(IntAct) intact:EBI-1750293|imex:IM-18932-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0328"(small molecule) psi-mi:"MI:0326"(protein) - interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 - - - figure legend:Figure 5C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:-1(in vitro)|taxid:-1(In vitro) - 2008/04/03 2014/10/16 - rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 intact-crc:913367D359B2DB02 false - glutathione s tranferase tag:?-? - - psi-mi:"MI:0422"(immunostaining) psi-mi:"MI:0422"(immunostaining) uniprotkb:Q5W7F2 uniprotkb:Q5W7F2 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:"MI:0018"(two hybrid) Koizumi et al. (2005) pubmed:15743878|imex:IM-18932 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1750307|imex:IM-18932-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 - - - figure legend:Figure 5D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2008/04/03 2014/10/16 rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 intact-crc:A6D8C79A8AFD422E|rigid:9xxmnCeUa59cWor1ax67JP6iLBc false necessary binding region:17-221 necessary binding region:17-221 - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant) uniprotkb:O65359 uniprotkb:Q5W7F2 intact:EBI-1750331|uniprotkb:O04639|ensemblplants:AT5G26980.1|ensemblplants:AT5G26980.2|ensemblplants:AT5G26980.3 intact:EBI-994222|uniprotkb:Q0WNK6|uniprotkb:Q9LYU6|ensemblplants:AT5G13300.1 psi-mi:syp41_arath(display_long)|uniprotkb:SYP41(gene name)|psi-mi:SYP41(display_short)|uniprotkb:F2P16.16(orf name)|uniprotkb:At5g26980(locus name) psi-mi:agd3_arath(display_long)|uniprotkb:SFC(gene name synonym)|uniprotkb:Protein SCARFACE(gene name synonym)|uniprotkb:AGD3(gene name)|psi-mi:AGD3(display_short)|uniprotkb:T31B5.120(orf name)|uniprotkb:At5g13300(locus name)|uniprotkb:VAN3(gene name synonym)|uniprotkb:Protein ARF-GAP DOMAIN 3(gene name synonym)|uniprotkb:Protein VASCULAR NETWORK 3(gene name synonym)|uniprotkb:FKD2(gene name synonym)|uniprotkb:Protein FORKED 2(gene name synonym) psi-mi:"MI:0663"(confocal microscopy) Koizumi et al. (2005) pubmed:15743878|imex:IM-18932 taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)") psi-mi:"MI:0403"(colocalization) psi-mi:"MI:0469"(IntAct) intact:EBI-1750324|imex:IM-18932-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_001031950.1|refseq:NP_198050.1|interpro:IPR006012(Syntaxin/epimorphin, conserved site)|interpro:IPR006011(Syntaxin, N-terminal)|interpro:IPR010989(t-SNARE)|interpro:IPR000727(Target SNARE coiled-coil region)|refseq:NP_001331924.1|go:"GO:0016021"(integral component of membrane)|go:"GO:0031201"(SNARE complex)|go:"GO:0048278"(vesicle docking)|ensemblplants:AT5G26980(gene)|ensemblplants:AT5G26980.1(transcript)|ensemblplants:AT5G26980.2(transcript)|ensemblplants:AT5G26980.3(transcript)|go:"GO:0000149"(SNARE binding)|go:"GO:0005484"(SNAP receptor activity)|go:"GO:0005802"(trans-Golgi network)|go:"GO:0006886"(intracellular protein transport)|go:"GO:0006906"(vesicle fusion)|go:"GO:0012505"(endomembrane system) interpro:IPR027267|refseq:NP_196834.3|interpro:IPR002110(Ankyrin)|interpro:IPR001164(Arf GTPase activating protein)|interpro:IPR001849(Pleckstrin-like)|ensemblplants:AT5G13300(gene)|ensemblplants:AT5G13300.1(transcript)|go:"GO:0005096"(GTPase activator activity)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009733"(response to auxin)|go:"GO:0009965"(leaf morphogenesis)|go:"GO:0010051"(xylem and phloem pattern formation)|go:"GO:0010087"(phloem or xylem histogenesis)|go:"GO:0030140"(trans-Golgi network transport vesicle)|go:"GO:0035091"(phosphatidylinositol binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0006897"(endocytosis)|interpro:IPR004148(BAR)|interpro:IPR038508|interpro:IPR035670|interpro:IPR036770|interpro:IPR037278 - - - figure legend:Figure 6|comment:"The authors conclude that \"These results indicate that the VAN3 protein is located in the TGN. Interestingly, not all the TGN\" ( trans-Golgi network )\" was positive for VAN3-Venus. This unique localization pattern suggests that the TGN is not uniform, but is functionally differentiated in plant cells\"."|caution:The authors do not specifically state the Syntaxin-41 construct is GFP tagged in the materials and methods , it is assumed this is a typographical error from the legend of Figure 6.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:3702(arath-cell-culture)|taxid:3702(Arabidopsis thaliana cell culture) - 2008/04/03 2014/10/16 rogid:sYCHICRt9ye3D5MRE7rhQJe4pdU3702 rogid:j35fwiiQdpDlA5WorGY+rHmfKn43702 intact-crc:A6C68A16ED344820|rigid:ld7GcApJOyM5BFpv6LgUXCCh4eo false green fluorescent protein tag:?-? tag:n-n - - psi-mi:"MI:0867"(tag visualisation by fluorescence) psi-mi:"MI:0867"(tag visualisation by fluorescence)