#ID(s) interactor A	ID(s) interactor B	Alt. ID(s) interactor A	Alt. ID(s) interactor B	Alias(es) interactor A	Alias(es) interactor B	Interaction detection method(s)	Publication 1st author(s)	Publication Identifier(s)	Taxid interactor A	Taxid interactor B	Interaction type(s)	Source database(s)	Interaction identifier(s)	Confidence value(s)	Expansion method(s)	Biological role(s) interactor A	Biological role(s) interactor B	Experimental role(s) interactor A	Experimental role(s) interactor B	Type(s) interactor A	Type(s) interactor B	Xref(s) interactor A	Xref(s) interactor B	Interaction Xref(s)	Annotation(s) interactor A	Annotation(s) interactor B	Interaction annotation(s)	Host organism(s)	Interaction parameter(s)	Creation date	Update date	Checksum(s) interactor A	Checksum(s) interactor B	Interaction Checksum(s)	Negative	Feature(s) interactor A	Feature(s) interactor B	Stoichiometry(s) interactor A	Stoichiometry(s) interactor B	Identification method participant A	Identification method participant B
uniprotkb:P54609	uniprotkb:P54609	intact:EBI-1563238|ensemblplants:AT3G09840.1	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0807"(comigration in gel electrophoresis)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0915"(physical association)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563251|imex:IM-19504-1	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	-	-	-	figure legend:1|comment:The complex of CDC48A proteins was identified as a hexamer on the basis of its calculated molecular weight.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/12/04	2014/10/16	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:1F9FFA31C28CADE0|rigid:t0AMpKDaQJfsBenRLcPN3OVOE3U	false	yellow fluorescent protein tag:c-c|necessary binding region:1-188|necessary binding region:448-809	yellow fluorescent protein tag:c-c|necessary binding region:1-188|necessary binding region:448-809	6	0	psi-mi:"MI:0705"(anti tag western blot)	psi-mi:"MI:0705"(anti tag western blot)
uniprotkb:Q9SS94	uniprotkb:P54609	intact:EBI-1563379|uniprotkb:Q8L769|ensemblplants:AT3G01610.1	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:cd48c_arath(display_long)|uniprotkb:EMB1354(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1354(gene name synonym)|uniprotkb:CDC48C(gene name)|psi-mi:CDC48C(display_short)|uniprotkb:F4P13.15(orf name)|uniprotkb:At3g01610(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0416"(fluorescence microscopy)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0403"(colocalization)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563364|imex:IM-19504-2	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027417|refseq:NP_186810.2|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR041569|ensemblplants:AT3G01610(gene)|ensemblplants:AT3G01610.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005856"(cytoskeleton)|go:"GO:0007049"(cell cycle)|go:"GO:0009524"(phragmoplast)|go:"GO:0015031"(protein transport)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0051301"(cell division)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:1990275"(preribosome binding)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	go:"GO:0005634"(nucleus)	-	-	figure legend:2|comment:The proteins colocalised to the nucleus.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/12/04	2014/10/16	rogid:b0FjuUXwf87YMLFb/W2FPuxoSCo3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:D4FBD008D821FAF5|rigid:ZAcqco9o7j/6e9lDad/rcdFmIN8	false	cyan fluorescent protein tag:?-?	yellow fluorescent protein tag:c-c|necessary binding region:449-809	-	6	psi-mi:"MI:0867"(tag visualisation by fluorescence)	psi-mi:"MI:0867"(tag visualisation by fluorescence)
uniprotkb:Q94AG2	uniprotkb:P54609	intact:EBI-1555537|uniprotkb:C0LGI6|uniprotkb:Q9M9G3|ensemblplants:AT1G71830.1	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:serk1_arath(display_long)|uniprotkb:SERK1(gene name)|psi-mi:SERK1(display_short)|uniprotkb:Somatic embryogenesis receptor-like kinase 1(gene name synonym)|uniprotkb:F14O23.21(orf name)|uniprotkb:F14O23_24(orf name)|uniprotkb:At1g71830(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0055"(fluorescent resonance energy transfer)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563615|imex:IM-19504-3	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0584"(fluorescence acceptor)	psi-mi:"MI:0583"(fluorescence donor)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_177328.1|dip:DIP-38028N|ensemblplants:AT1G71830(gene)|ensemblplants:AT1G71830.1(transcript)|go:"GO:0004675"(transmembrane receptor protein serine/threonine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007030"(Golgi organization)|go:"GO:0009556"(microsporogenesis)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010152"(pollen maturation)|go:"GO:0010227"(floral organ abscission)|go:"GO:0016021"(integral component of membrane)|go:"GO:0033612"(receptor serine/threonine kinase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013210(Leucine-rich repeat, N-terminal)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR031048|interpro:IPR032675|rcsb pdb:4LSC|rcsb pdb:4LSX|rcsb pdb:4Z64|rcsb pdb:5IYX|rcsb pdb:6FG8	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	go:"GO:0005886"(plasma membrane)	-	-	figure legend:4 Table 1|comment:The proteins colocalised to the plasma membrane|comment:"The authors contest that \"in those membrane areas where interaction between SERK1 and CDC48A occurs, a substantial amount of CDC48A is in oligomeric form\"."|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/12/04	2014/10/16	rogid:Fzs3U202WAMhpJ7dMNv0PN4r7t83702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:347FA114CC1B2194|rigid:voyuaGYQDADTG6UrknQcbxfdDco	false	yellow fluorescent protein tag:?-?	cyan fluorescent protein tag:?-?	-	6	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q9SS94	uniprotkb:Q9SS94	intact:EBI-1563379|uniprotkb:Q8L769|ensemblplants:AT3G01610.1	intact:EBI-1563379|uniprotkb:Q8L769|ensemblplants:AT3G01610.1	psi-mi:cd48c_arath(display_long)|uniprotkb:EMB1354(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1354(gene name synonym)|uniprotkb:CDC48C(gene name)|psi-mi:CDC48C(display_short)|uniprotkb:F4P13.15(orf name)|uniprotkb:At3g01610(locus name)	psi-mi:cd48c_arath(display_long)|uniprotkb:EMB1354(gene name synonym)|uniprotkb:Protein EMBRYO DEFECTIVE 1354(gene name synonym)|uniprotkb:CDC48C(gene name)|psi-mi:CDC48C(display_short)|uniprotkb:F4P13.15(orf name)|uniprotkb:At3g01610(locus name)	psi-mi:"MI:0055"(fluorescent resonance energy transfer)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563725|imex:IM-19504-4	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0583"(fluorescence donor)	psi-mi:"MI:0584"(fluorescence acceptor)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027417|refseq:NP_186810.2|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR041569|ensemblplants:AT3G01610(gene)|ensemblplants:AT3G01610.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005856"(cytoskeleton)|go:"GO:0007049"(cell cycle)|go:"GO:0009524"(phragmoplast)|go:"GO:0015031"(protein transport)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0051301"(cell division)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:1990275"(preribosome binding)	interpro:IPR027417|refseq:NP_186810.2|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR041569|ensemblplants:AT3G01610(gene)|ensemblplants:AT3G01610.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0005856"(cytoskeleton)|go:"GO:0007049"(cell cycle)|go:"GO:0009524"(phragmoplast)|go:"GO:0015031"(protein transport)|go:"GO:0042254"(ribosome biogenesis)|go:"GO:0051301"(cell division)|go:"GO:0051973"(positive regulation of telomerase activity)|go:"GO:1990275"(preribosome binding)	-	-	-	figure legend:4, 5, Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/12/04	2014/10/16	rogid:b0FjuUXwf87YMLFb/W2FPuxoSCo3702	rogid:b0FjuUXwf87YMLFb/W2FPuxoSCo3702	intact-crc:095F895256CCA006|rigid:rJRMKGu1dCnNBHI2rYvTlju2bvU	false	cyan fluorescent protein tag:n-n	yellow fluorescent protein tag:n-n	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:P54609	uniprotkb:P54609	intact:EBI-1563238|ensemblplants:AT3G09840.1	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0055"(fluorescent resonance energy transfer)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0407"(direct interaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1632740|imex:IM-19504-7	-	-	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0499"(unspecified role)	psi-mi:"MI:0583"(fluorescence donor)	psi-mi:"MI:0584"(fluorescence acceptor)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	-	-	-	figure legend:4 Table 1|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	2007/12/04	2014/10/16	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:315F1F62BA628098|rigid:SydcjGbuyThBB1VwiKXMLtgsrR8	false	cyan fluorescent protein tag:?-?	red fluorescent protein tag:?-?	-	-	psi-mi:"MI:0396"(predetermined participant)	psi-mi:"MI:0396"(predetermined participant)
uniprotkb:Q94AG2	uniprotkb:P54609	intact:EBI-1555537|uniprotkb:C0LGI6|uniprotkb:Q9M9G3|ensemblplants:AT1G71830.1	intact:EBI-1563238|ensemblplants:AT3G09840.1	psi-mi:serk1_arath(display_long)|uniprotkb:SERK1(gene name)|psi-mi:SERK1(display_short)|uniprotkb:Somatic embryogenesis receptor-like kinase 1(gene name synonym)|uniprotkb:F14O23.21(orf name)|uniprotkb:F14O23_24(orf name)|uniprotkb:At1g71830(locus name)	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:"MI:0424"(protein kinase assay)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0217"(phosphorylation reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563805|imex:IM-19504-5	-	-	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0502"(enzyme target)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	refseq:NP_177328.1|dip:DIP-38028N|ensemblplants:AT1G71830(gene)|ensemblplants:AT1G71830.1(transcript)|go:"GO:0004675"(transmembrane receptor protein serine/threonine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007030"(Golgi organization)|go:"GO:0009556"(microsporogenesis)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010152"(pollen maturation)|go:"GO:0010227"(floral organ abscission)|go:"GO:0016021"(integral component of membrane)|go:"GO:0033612"(receptor serine/threonine kinase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013210(Leucine-rich repeat, N-terminal)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR031048|interpro:IPR032675|rcsb pdb:4LSC|rcsb pdb:4LSX|rcsb pdb:4Z64|rcsb pdb:5IYX|rcsb pdb:6FG8	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	go:"GO:0006468"(protein phosphorylation)|go:"GO:0004672"(protein kinase activity)	-	-	figure legend:6|resulting-ptm:phosphorylation of CDC48A|caution:The coordinates of the SERK1 kinase domain did not appear in the paper and the coordinates of this domain are taken from the UniProt record of this protein.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2007/12/04	2014/10/16	rogid:Fzs3U202WAMhpJ7dMNv0PN4r7t83702	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	intact-crc:3D3EF35D81E23288|rigid:voyuaGYQDADTG6UrknQcbxfdDco	false	glutathione s tranferase tag:?-?|binding-associated region:302..302-589..589	glutathione s tranferase tag:?-?	-	6	psi-mi:"MI:0821"(molecular weight estimation by autoradiography)	psi-mi:"MI:0821"(molecular weight estimation by autoradiography)
uniprotkb:Q94AG2	-	intact:EBI-1555537|uniprotkb:C0LGI6|uniprotkb:Q9M9G3|ensemblplants:AT1G71830.1	-	psi-mi:serk1_arath(display_long)|uniprotkb:SERK1(gene name)|psi-mi:SERK1(display_short)|uniprotkb:Somatic embryogenesis receptor-like kinase 1(gene name synonym)|uniprotkb:F14O23.21(orf name)|uniprotkb:F14O23_24(orf name)|uniprotkb:At1g71830(locus name)	-	psi-mi:"MI:0424"(protein kinase assay)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	-	psi-mi:"MI:0217"(phosphorylation reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1632751|imex:IM-19504-8	-	-	psi-mi:"MI:0898"(putative self)	-	psi-mi:"MI:0898"(putative self)	-	psi-mi:"MI:0326"(protein)	-	refseq:NP_177328.1|dip:DIP-38028N|ensemblplants:AT1G71830(gene)|ensemblplants:AT1G71830.1(transcript)|go:"GO:0004675"(transmembrane receptor protein serine/threonine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007030"(Golgi organization)|go:"GO:0009556"(microsporogenesis)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010152"(pollen maturation)|go:"GO:0010227"(floral organ abscission)|go:"GO:0016021"(integral component of membrane)|go:"GO:0033612"(receptor serine/threonine kinase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013210(Leucine-rich repeat, N-terminal)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR031048|interpro:IPR032675|rcsb pdb:4LSC|rcsb pdb:4LSX|rcsb pdb:4Z64|rcsb pdb:5IYX|rcsb pdb:6FG8	-	go:"GO:0006468"(protein phosphorylation)|go:"GO:0004672"(protein kinase activity)	-	-	figure legend:6|resulting-ptm:Autophosphorylation of Q94AG2|caution:The coordinates of the SERK1 kinase domain did not appear in the paper and the coordinates of this domain are taken from the UniProt record of this protein.|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2007/12/04	2014/10/16	rogid:Fzs3U202WAMhpJ7dMNv0PN4r7t83702	-	intact-crc:5590322B0F0C6CE0	false	glutathione s tranferase tag:?-?|binding-associated region:302..302-589..589	-	-	-	psi-mi:"MI:0821"(molecular weight estimation by autoradiography)	-
uniprotkb:P54609	uniprotkb:Q94AG2	intact:EBI-1563238|ensemblplants:AT3G09840.1	intact:EBI-1555537|uniprotkb:C0LGI6|uniprotkb:Q9M9G3|ensemblplants:AT1G71830.1	psi-mi:cd48a_arath(display_long)|uniprotkb:CDC48A(gene name)|psi-mi:CDC48A(display_short)|uniprotkb:CDC48(gene name synonym)|uniprotkb:F8A24.11(orf name)|uniprotkb:At3g09840(locus name)	psi-mi:serk1_arath(display_long)|uniprotkb:SERK1(gene name)|psi-mi:SERK1(display_short)|uniprotkb:Somatic embryogenesis receptor-like kinase 1(gene name synonym)|uniprotkb:F14O23.21(orf name)|uniprotkb:F14O23_24(orf name)|uniprotkb:At1g71830(locus name)	psi-mi:"MI:0423"(in-gel kinase assay)	Aker et al. (2007)	pubmed:17693538|imex:IM-19504	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	taxid:3702(arath)|taxid:3702("Arabidopsis thaliana (Mouse-ear cress)")	psi-mi:"MI:0217"(phosphorylation reaction)	psi-mi:"MI:0469"(IntAct)	intact:EBI-1563876|imex:IM-19504-6	-	-	psi-mi:"MI:0502"(enzyme target)	psi-mi:"MI:0501"(enzyme)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0497"(neutral component)	psi-mi:"MI:0326"(protein)	psi-mi:"MI:0326"(protein)	interpro:IPR027417|refseq:NP_187595.1|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR005938(AAA ATPase, CDC48)|interpro:IPR003959(AAA ATPase, core)|interpro:IPR003960(AAA ATPase, conserved site)|interpro:IPR003338(AAA ATPase VAT, N-terminal)|interpro:IPR004201(Cell division protein 48, CDC48, domain 2)|interpro:IPR041569|rcsb pdb:6HD3|interpro:IPR029067|ensemblplants:AT3G09840(gene)|ensemblplants:AT3G09840.1(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005618"(cell wall)|go:"GO:0005634"(nucleus)|go:"GO:0005635"(nuclear envelope)|go:"GO:0005730"(nucleolus)|go:"GO:0005737"(cytoplasm)|go:"GO:0005794"(Golgi apparatus)|go:"GO:0005811"(lipid droplet)|go:"GO:0005819"(spindle)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0009506"(plasmodesma)|go:"GO:0009524"(phragmoplast)|go:"GO:0009846"(pollen germination)|go:"GO:0009860"(pollen tube growth)|go:"GO:0016787"(hydrolase activity)|go:"GO:0022626"(cytosolic ribosome)|go:"GO:0030433"(ubiquitin-dependent ERAD pathway)|go:"GO:0030970"(retrograde protein transport, ER to cytosol)|go:"GO:0031348"(negative regulation of defense response)|go:"GO:0031593"(polyubiquitin modification-dependent protein binding)|go:"GO:0031648"(protein destabilization)|go:"GO:0034098"(VCP-NPL4-UFD1 AAA ATPase complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0046686"(response to cadmium ion)|go:"GO:0051228"(mitotic spindle disassembly)|go:"GO:0051301"(cell division)|go:"GO:0071712"(ER-associated misfolded protein catabolic process)|go:"GO:0097352"(autophagosome maturation)	refseq:NP_177328.1|dip:DIP-38028N|ensemblplants:AT1G71830(gene)|ensemblplants:AT1G71830.1(transcript)|go:"GO:0004675"(transmembrane receptor protein serine/threonine kinase activity)|go:"GO:0004714"(transmembrane receptor protein tyrosine kinase activity)|go:"GO:0005102"(signaling receptor binding)|go:"GO:0005524"(ATP binding)|go:"GO:0005739"(mitochondrion)|go:"GO:0005789"(endoplasmic reticulum membrane)|go:"GO:0005886"(plasma membrane)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0007030"(Golgi organization)|go:"GO:0009556"(microsporogenesis)|go:"GO:0009742"(brassinosteroid mediated signaling pathway)|go:"GO:0009793"(embryo development ending in seed dormancy)|go:"GO:0010152"(pollen maturation)|go:"GO:0010227"(floral organ abscission)|go:"GO:0016021"(integral component of membrane)|go:"GO:0033612"(receptor serine/threonine kinase binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046777"(protein autophosphorylation)|go:"GO:0106310"(protein serine kinase activity)|go:"GO:0106311"|interpro:IPR000719(Protein kinase, core)|interpro:IPR008271(Serine/threonine protein kinase, active site)|interpro:IPR011009(Protein kinase-like)|interpro:IPR013210(Leucine-rich repeat, N-terminal)|interpro:IPR017441(Protein kinase ATP binding, conserved site)|interpro:IPR031048|interpro:IPR032675|rcsb pdb:4LSC|rcsb pdb:4LSX|rcsb pdb:4Z64|rcsb pdb:5IYX|rcsb pdb:6FG8	go:"GO:0006468"(protein phosphorylation)|go:"GO:0004672"(protein kinase activity)	-	-	figure legend:6|resulting-ptm:phosphorylation of CDC48A at Serine 41|caution:The coordinates of the SERK1 kinase domain did not appear in the paper and the coordinates of this domain are taken from the UniProt record of this protein.|caution:"The authors point out that they did \" not have any peptide coverage in the C-terminal tail (from amino acid 775 onward; Fig. 6B), where three Sers, three Thrs, and one Tyr are present, so there may be additional targets for SERK1 phosphorylation\"."|full coverage:Only protein-protein interactions|curation depth:imex curation	taxid:-1(in vitro)|taxid:-1(In vitro)	-	2007/12/04	2014/10/16	rogid:aDCNRk5I9qDSQtC5sO0SzJoGxSI3702	rogid:Fzs3U202WAMhpJ7dMNv0PN4r7t83702	intact-crc:2EC3FA217D410240|rigid:voyuaGYQDADTG6UrknQcbxfdDco	false	glutathione s tranferase tag:?-?	glutathione s tranferase tag:?-?|binding-associated region:302..302-589..589	6	-	psi-mi:"MI:0082"(peptide massfingerprinting)	psi-mi:"MI:0082"(peptide massfingerprinting)