#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P00363 uniprotkb:P0AC47 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-906724|uniprotkb:P00364|uniprotkb:Q2M6E9|ensemblbacteria:AAC77113|ensemblbacteria:BAE78157 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:frdb_ecoli(display_long)|uniprotkb:frdB(gene name)|psi-mi:frdB(display_short)|uniprotkb:Quinol-fumarate reductase iron-sulfur subunit(gene name synonym)|uniprotkb:JW4114(locus name)|uniprotkb:b4153(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 refseq:NP_418577.1|refseq:WP_000829498.1|dip:DIP-9682N|ensemblbacteria:AAC77113(transcript)|ensemblbacteria:b4153(gene)|ensemblbacteria:BAE78157(gene)|ensemblbacteria:BAE78157(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006113"(fermentation)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|go:"GO:0051538"(3 iron, 4 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR001041(Ferredoxin)|interpro:IPR004489(Succinate dehydrogenase/fumarate reductase iron-sulphur protein)|interpro:IPR006058(2Fe-2S ferredoxin, iron-sulphur binding site)|interpro:IPR009051(Alpha-helical ferredoxin)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR017896|interpro:IPR017900|interpro:IPR025192|interpro:IPR036010|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:6BEDH9lhrN3Ahc7QDc8KQG9AFZY83333 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00363 uniprotkb:P0AFG9 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-542695|uniprotkb:P06958|uniprotkb:P78049|uniprotkb:Q53382|ensemblbacteria:AAG54418|ensemblbacteria:BAB33541 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:odp1_eco57(display_long)|uniprotkb:aceE(gene name)|psi-mi:aceE(display_short)|uniprotkb:Z0124(locus name)|uniprotkb:ECs0118(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83334(eco57)|taxid:83334("Escherichia coli O157:H7") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 ensemblbacteria:AAG54418(transcript)|ensemblbacteria:BAB33541(transcript)|ensemblbacteria:ECs_0118(gene)|ensemblbacteria:Z0124(gene)|go:"GO:0004739"("pyruvate dehydrogenase (acetyl-transferring) activity")|go:"GO:0006096"(glycolytic process)|go:"GO:0046872"(metal ion binding)|refseq:NP_308145.1|interpro:IPR004660(2-oxo-acid dehydrogenase E1 component homodimeric type)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR005474(Transketolase, N-terminal)|rcsb pdb:3LPL|rcsb pdb:3LQ2|rcsb pdb:3LQ4|refseq:WP_000003820.1|interpro:IPR035807|interpro:IPR029061|interpro:IPR041621 - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:Mw8XYrFHqJcJIcvxe5fLBt8k65883334 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00363 uniprotkb:P0A915 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00363 uniprotkb:P37194 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-907245|uniprotkb:Q2M7G8|uniprotkb:P76709|ensemblbacteria:AAC76531|ensemblbacteria:BAE77788 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:slp_ecoli(display_long)|uniprotkb:slp(gene name)|psi-mi:slp(display_short)|uniprotkb:b3506(locus name)|uniprotkb:JW3474(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 interpro:IPR004658(Outer membrane lipoprotein Slp)|refseq:NP_417963.4|refseq:WP_001350553.1|ensemblbacteria:AAC76531(transcript)|ensemblbacteria:b3506(gene)|ensemblbacteria:BAE77788(gene)|ensemblbacteria:BAE77788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0042802"(identical protein binding) - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:crQUuQAx+2S35HrjXjpyKwB4y9Q83333 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00363 uniprotkb:P75818 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-1212124|ensemblbacteria:AAC73952|ensemblbacteria:BAA35579 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:ybjp_ecoli(display_long)|uniprotkb:ybjP(gene name)|psi-mi:ybjP(display_short)|uniprotkb:b0865(locus name)|uniprotkb:JW0849(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 refseq:NP_415386.1|interpro:IPR024289|refseq:WP_001270734.1|ensemblbacteria:AAC73952(transcript)|ensemblbacteria:b0865(gene)|ensemblbacteria:BAA35579(gene)|ensemblbacteria:BAA35579(transcript)|go:"GO:0005886"(plasma membrane) - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:SCM8lVE1rjsbuZJ2NWzita8DzZY83333 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00363 uniprotkb:P77804 intact:EBI-550480|uniprotkb:Q2M6E8|ensemblbacteria:AAC77114|ensemblbacteria:BAE78158 intact:EBI-552466|uniprotkb:Q47707|ensemblbacteria:AAC74686|ensemblbacteria:BAA15362 psi-mi:frda_ecoli(display_long)|uniprotkb:frdA(gene name)|psi-mi:frdA(display_short)|uniprotkb:Quinol-fumarate reductase flavoprotein subunit(gene name synonym)|uniprotkb:JW4115(locus name)|uniprotkb:b4154(locus name) psi-mi:ydga_ecoli(display_long)|uniprotkb:ydgA(gene name)|psi-mi:ydgA(display_short)|uniprotkb:b1614(locus name)|uniprotkb:JW1606(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212123|imex:IM-19194-1 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418578.1|refseq:WP_001192973.1|dip:DIP-9681N|ensemblbacteria:AAC77114(transcript)|ensemblbacteria:b4154(gene)|ensemblbacteria:BAE78158(gene)|ensemblbacteria:BAE78158(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006113"(fermentation)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|go:"GO:0071949"(FAD binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR005884(Fumarate reductase, flavoprotein subunit)|interpro:IPR011280(Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S|rcsb pdb:4KX6|rcsb pdb:5VPN|rcsb pdb:6AWF|rcsb pdb:6B58 refseq:NP_416131.1|refseq:WP_001043339.1|dip:DIP-11709N|ensemblbacteria:AAC74686(transcript)|ensemblbacteria:b1614(gene)|ensemblbacteria:BAA15362(gene)|ensemblbacteria:BAA15362(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR010352(Protein of unknown function DUF945, bacterial) - - - figure legend:Figure 3 Figure 4A Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:7SLK6ZQyU/99f/hv5R8G6fEojt883333 rogid:TvjP6Du0SKF0AnFT2P/Ox8+JE6I83333 intact-crc:9516DC210C24A7E5|rigid:E003/vqxjoqQkHnvitQGlwSvVxY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P13035 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-548509|uniprotkb:P78115|uniprotkb:Q2M790|uniprotkb:Q47234|ensemblbacteria:AAC76451|ensemblbacteria:BAE77866 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:glpd_ecoli(display_long)|uniprotkb:glpD(gene name)|psi-mi:glpD(display_short)|uniprotkb:glyD(gene name synonym)|uniprotkb:b3426(locus name)|uniprotkb:JW3389(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212144|imex:IM-19194-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY refseq:NP_417884.1|refseq:WP_000448136.1|dip:DIP-9793N|ensemblbacteria:AAC76451(transcript)|ensemblbacteria:b3426(gene)|ensemblbacteria:BAE77866(gene)|ensemblbacteria:BAE77866(transcript)|go:"GO:0004368"("glycerol-3-phosphate dehydrogenase (quinone) activity")|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009331"(glycerol-3-phosphate dehydrogenase complex)|go:"GO:0019563"(glycerol catabolic process)|go:"GO:0046168"(glycerol-3-phosphate catabolic process)|go:"GO:0052590"("sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity")|go:"GO:0052591"("sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity")|go:"GO:0071949"(FAD binding)|interpro:IPR000447(FAD-dependent glycerol-3-phosphate dehydrogenase)|interpro:IPR006076(FAD dependent oxidoreductase)|interpro:IPR031656|interpro:IPR036188|interpro:IPR038299|rcsb pdb:2QCU|rcsb pdb:2R45|rcsb pdb:2R46|rcsb pdb:2R4E|rcsb pdb:2R4J - crc64:86F963E710553E22 crc64:1C4D341E9E4536AB figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:zQNScX2bR5Zqt2FNf2T+Yv8fuO083333 intact-crc:CC4B7A7852329205|rigid:SBbroQQNeHTT1eWWQzvZvY1jzCE false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P28635 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-1114713|ensemblbacteria:AAC73308|ensemblbacteria:BAA77874 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:metq_ecoli(display_long)|uniprotkb:metQ(gene name)|psi-mi:metQ(display_short)|uniprotkb:b0197(locus name)|uniprotkb:JW0193(locus name)|uniprotkb:yaeC(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212144|imex:IM-19194-2 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY refseq:WP_000874226.1|ensemblbacteria:AAC73308(transcript)|ensemblbacteria:b0197(gene)|ensemblbacteria:BAA77874(gene)|ensemblbacteria:BAA77874(transcript)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0048473"(D-methionine transport)|go:"GO:0055052"("ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing")|interpro:IPR004872(NLPA lipoprotein)|rcsb pdb:4YAH|rcsb pdb:6CVL|refseq:NP_414739.1|dip:DIP-11196N - crc64:86F963E710553E22 - figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:0I9WCTWquk4mQmBCTxHcI0v5D7w83333 intact-crc:CC4B7A7852329205|rigid:SBbroQQNeHTT1eWWQzvZvY1jzCE false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0ABB4 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-368783|uniprotkb:P00824|uniprotkb:Q2M850|ensemblbacteria:AAC76755|ensemblbacteria:BAE77556 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpb_ecoli(display_long)|uniprotkb:atpD(gene name)|psi-mi:atpD(display_short)|uniprotkb:papB(gene name synonym)|uniprotkb:uncD(gene name synonym)|uniprotkb:b3732(locus name)|uniprotkb:JW3710(locus name)|uniprotkb:ATP synthase F1 sector subunit beta(gene name synonym)|uniprotkb:F-ATPase subunit beta(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212150|imex:IM-19194-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:WP_000190506.1|refseq:NP_418188.1|go:"GO:0005886"(plasma membrane)|go:"GO:0016020"(membrane)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005722(ATPase, F1 complex, beta subunit)|interpro:IPR020003|interpro:IPR024034|interpro:IPR027417|interpro:IPR036121|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|ensemblbacteria:AAC76755(transcript)|ensemblbacteria:b3732(gene)|ensemblbacteria:BAE77556(gene)|ensemblbacteria:BAE77556(transcript)|go:"GO:0005524"(ATP binding)|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|rcsb pdb:6OQT|mint:P0ABB4|dip:DIP-31846N - - - figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:7p8uAF1b7b/u6Sksgw1OXZy0NC483333 intact-crc:12D005EAA2C1AD0B|rigid:E0wRZGr2KXbyOSanNNLXsocCpQ4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A6J5 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-1113690|uniprotkb:P29011|ensemblbacteria:AAC74273|ensemblbacteria:BAA36044 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:dada_ecoli(display_long)|uniprotkb:dadA(gene name)|psi-mi:dadA(display_short)|uniprotkb:dadR(gene name synonym)|uniprotkb:b1189(locus name)|uniprotkb:JW1178(locus name)|uniprotkb:D-alanine dehydrogenase(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212150|imex:IM-19194-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_415707.1|refseq:WP_001266908.1|ensemblbacteria:AAC74273(transcript)|ensemblbacteria:b1189(gene)|ensemblbacteria:BAA36044(gene)|ensemblbacteria:BAA36044(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0008718"(D-amino-acid dehydrogenase activity)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0019480"(L-alanine oxidation to pyruvate via D-alanine)|go:"GO:0055130"(D-alanine catabolic process)|interpro:IPR006076(FAD dependent oxidoreductase)|interpro:IPR023080|interpro:IPR036188|dip:DIP-6852N - - - figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:yCoYN/jMP7RN17G3KeckQQkh1dg83333 intact-crc:12D005EAA2C1AD0B|rigid:E0wRZGr2KXbyOSanNNLXsocCpQ4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A7E1 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-554487|uniprotkb:P05021|ensemblbacteria:AAC74031|ensemblbacteria:BAA35700 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:pyrd_ecoli(display_long)|uniprotkb:Dihydroorotate oxidase(gene name synonym)|uniprotkb:DHOdehase(gene name synonym)|uniprotkb:pyrD(gene name)|psi-mi:pyrD(display_short)|uniprotkb:b0945(locus name)|uniprotkb:JW0928(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212150|imex:IM-19194-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_415465.1|refseq:WP_001295352.1|dip:DIP-35945N|ensemblbacteria:AAC74031(transcript)|ensemblbacteria:b0945(gene)|ensemblbacteria:BAA35700(gene)|ensemblbacteria:BAA35700(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0009220"(pyrimidine ribonucleotide biosynthetic process)|go:"GO:0010181"(FMN binding)|go:"GO:0016020"(membrane)|go:"GO:0044205"('de novo' UMP biosynthetic process)|interpro:IPR001295(Dihydroorotate dehydrogenase, core)|interpro:IPR005719(Dihydroorotate dehydrogenase, class 2)|interpro:IPR005720(Dihydroorotate dehydrogenase, class 1, core)|interpro:IPR012135(Dihydroorotate dehydrogenase, classes 1 and 2)|interpro:IPR013785(Aldolase-type TIM barrel)|rcsb pdb:1F76|go:"GO:0004152"(dihydroorotate dehydrogenase activity) - - crc64:973227EAE6B83622 figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:WTtRhBgYzeNyVNK9YO6jSEhalxQ83333 intact-crc:12D005EAA2C1AD0B|rigid:E0wRZGr2KXbyOSanNNLXsocCpQ4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A7L0 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-543771|uniprotkb:P02384|uniprotkb:Q2M8S0|ensemblbacteria:AAC76958|ensemblbacteria:BAE77336 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:rl1_ecoli(display_long)|uniprotkb:rplA(gene name)|psi-mi:rplA(display_short)|uniprotkb:Large ribosomal subunit protein uL1(gene name synonym)|uniprotkb:JW3947(locus name)|uniprotkb:b3984(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212150|imex:IM-19194-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_418411.1|refseq:WP_001096684.1|ensemblbacteria:AAC76958(transcript)|ensemblbacteria:b3984(gene)|ensemblbacteria:BAE77336(gene)|ensemblbacteria:BAE77336(transcript)|go:"GO:0000027"(ribosomal large subunit assembly)|go:"GO:0000049"(tRNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0003723"(RNA binding)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|go:"GO:0006412"(translation)|go:"GO:0019843"(rRNA binding)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0045947"(negative regulation of translational initiation)|interpro:IPR002143(Ribosomal protein L1)|interpro:IPR005878(Ribosomal protein L1, bacterial-type)|interpro:IPR016095(Ribosomal protein L1, 3-layer alpha/beta-sandwich)|interpro:IPR023673|interpro:IPR023674|rcsb pdb:4V5H|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6K|interpro:IPR028364|rcsb pdb:4V6L|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:1ML5|rcsb pdb:2RDO|rcsb pdb:3J46|rcsb pdb:3J5S|rcsb pdb:3J8G|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:1EG0|rcsb pdb:4V4V|rcsb pdb:4V4W|dip:DIP-35746N|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7C|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4WOI|rcsb pdb:5ADY|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:6BU8|rcsb pdb:6ENJ|rcsb pdb:6ENU|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:7JSZ - - - figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:SDyoEYtquixLGCdVegAmQdyeFG883333 intact-crc:12D005EAA2C1AD0B|rigid:E0wRZGr2KXbyOSanNNLXsocCpQ4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A7R1 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-546437|uniprotkb:P02418|uniprotkb:Q2M6A2|ensemblbacteria:BAE78204|ensemblbacteria:AAC77160 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:rl9_ecoli(display_long)|uniprotkb:rplI(gene name)|psi-mi:rplI(display_short)|uniprotkb:Large ribosomal subunit protein bL9(gene name synonym)|uniprotkb:JW4161(locus name)|uniprotkb:b4203(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212150|imex:IM-19194-3 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_418624.1|ensemblbacteria:BAE78204(gene)|ensemblbacteria:BAE78204(transcript)|go:"GO:0003735"(structural constituent of ribosome)|go:"GO:0005829"(cytosol)|ensemblbacteria:b4203(gene)|go:"GO:0006412"(translation)|go:"GO:0022625"(cytosolic large ribosomal subunit)|go:"GO:0070180"(large ribosomal subunit rRNA binding)|interpro:IPR000244(Ribosomal protein L9)|interpro:IPR009027(Ribosomal protein L9 N-terminal-like)|interpro:IPR020069|interpro:IPR020070|interpro:IPR020594|interpro:IPR036791|interpro:IPR036935|rcsb pdb:2J28|rcsb pdb:2RDO|rcsb pdb:3BBX|rcsb pdb:3J8G|rcsb pdb:3J9Y|rcsb pdb:3J9Z|rcsb pdb:3JA1|rcsb pdb:3JBU|rcsb pdb:3JBV|rcsb pdb:3JCD|rcsb pdb:3JCE|rcsb pdb:3JCJ|rcsb pdb:3JCN|rcsb pdb:487D|rcsb pdb:4CSU|rcsb pdb:4U1U|rcsb pdb:4U1V|rcsb pdb:4U20|rcsb pdb:4U24|rcsb pdb:4U25|rcsb pdb:4U26|rcsb pdb:4U27|rcsb pdb:4UY8|rcsb pdb:4V47|rcsb pdb:4V48|rcsb pdb:4V4H|rcsb pdb:4V4Q|rcsb pdb:4V4V|rcsb pdb:4V4W|rcsb pdb:3J7Z|ensemblbacteria:AAC77160(transcript)|rcsb pdb:4V50|rcsb pdb:4V7C|rcsb pdb:3J5L|rcsb pdb:4V7D|rcsb pdb:4V7I|rcsb pdb:4V7S|rcsb pdb:4V7T|rcsb pdb:4V7U|rcsb pdb:4V7V|rcsb pdb:4V9C|rcsb pdb:4V9D|rcsb pdb:4V9O|rcsb pdb:4V9P|rcsb pdb:4WF1|rcsb pdb:4WOI|rcsb pdb:4WWW|rcsb pdb:4YBB|rcsb pdb:5ADY|rcsb pdb:5AFI|rcsb pdb:5AKA|rcsb pdb:5GAD|rcsb pdb:5GAE|rcsb pdb:5GAF|rcsb pdb:5GAG|rcsb pdb:5GAH|rcsb pdb:5H5U|rcsb pdb:5IQR|rcsb pdb:5IT8|rcsb pdb:5J5B|rcsb pdb:5J7L|rcsb pdb:5J88|rcsb pdb:5J8A|rcsb pdb:5J91|rcsb pdb:5JC9|rcsb pdb:5JTE|rcsb pdb:5JU8|rcsb pdb:5KCR|rcsb pdb:5KCS|rcsb pdb:5KPS|rcsb pdb:5KPV|rcsb pdb:5KPW|rcsb pdb:5KPX|rcsb pdb:5L3P|rcsb pdb:5LZA|rcsb pdb:5LZB|rcsb pdb:5LZC|rcsb pdb:5LZD|rcsb pdb:5LZE|rcsb pdb:5LZF|rcsb pdb:5MDV|rcsb pdb:5MDW|rcsb pdb:5MDY|rcsb pdb:5MDZ|rcsb pdb:5MGP|rcsb pdb:5NCO|rcsb pdb:5NP6|rcsb pdb:5NWY|rcsb pdb:5O2R|rcsb pdb:5U4I|rcsb pdb:5U9F|rcsb pdb:5U9G|rcsb pdb:5UYK|rcsb pdb:5UYL|rcsb pdb:5UYM|rcsb pdb:5UYN|rcsb pdb:5UYP|rcsb pdb:5UYQ|rcsb pdb:5WDT|rcsb pdb:5WE4|rcsb pdb:5WE6|rcsb pdb:5WFK|rcsb pdb:6BU8|rcsb pdb:6BY1|rcsb pdb:6C4I|rcsb pdb:6ENU|rcsb pdb:6GBZ|rcsb pdb:6GC0|rcsb pdb:6GC4|rcsb pdb:6GC8|rcsb pdb:6GWT|rcsb pdb:6GXM|rcsb pdb:6GXN|rcsb pdb:6GXO|rcsb pdb:6GXP|rcsb pdb:6H4N|rcsb pdb:6H58|rcsb pdb:6HRM|rcsb pdb:6I0Y|rcsb pdb:6I7V|rcsb pdb:6O9J|rcsb pdb:6OFX|rcsb pdb:6OG7|rcsb pdb:6ORE|rcsb pdb:6ORL|rcsb pdb:6OST|rcsb pdb:6OT3|rcsb pdb:6OUO|rcsb pdb:6Q97|rcsb pdb:6Q98|rcsb pdb:6Q9A|rcsb pdb:6QDW|rcsb pdb:6QUL|rcsb pdb:6S0K|rcsb pdb:6SZS|rcsb pdb:4V6M|rcsb pdb:4V6N|rcsb pdb:4V6O|rcsb pdb:4V6P|rcsb pdb:4V6Q|rcsb pdb:4V6R|rcsb pdb:4V6S|rcsb pdb:4V6T|rcsb pdb:4V6V|rcsb pdb:4V6Y|rcsb pdb:4V6Z|rcsb pdb:4V70|rcsb pdb:4V71|rcsb pdb:4V72|rcsb pdb:4V73|rcsb pdb:4V74|rcsb pdb:4V75|rcsb pdb:4V76|rcsb pdb:4V77|rcsb pdb:4V78|rcsb pdb:4V52|rcsb pdb:4V53|rcsb pdb:4V54|rcsb pdb:4V55|rcsb pdb:4V56|rcsb pdb:4V57|rcsb pdb:4V5B|rcsb pdb:4V5H|rcsb pdb:4V5Y|rcsb pdb:4V64|rcsb pdb:4V65|rcsb pdb:4V66|rcsb pdb:4V69|rcsb pdb:4V6C|rcsb pdb:4V6D|rcsb pdb:4V6E|rcsb pdb:4V6K|rcsb pdb:4V6L|rcsb pdb:4V79|rcsb pdb:4V7A|rcsb pdb:4V7B|rcsb pdb:6TC3|rcsb pdb:6VWL|rcsb pdb:6VWM|rcsb pdb:6VWN|rcsb pdb:6WD6|rcsb pdb:6WDB|rcsb pdb:6WDC|rcsb pdb:6WDD|rcsb pdb:6TBV|rcsb pdb:6WDE|rcsb pdb:6WDF|rcsb pdb:6WDG|rcsb pdb:6WDH|rcsb pdb:6WDI|rcsb pdb:6WDJ|rcsb pdb:6WDK|rcsb pdb:6WDL|rcsb pdb:6WDM|rcsb pdb:6WNT|rcsb pdb:6WNV|rcsb pdb:6WNW|rcsb pdb:6Y69|rcsb pdb:6YS3|rcsb pdb:6YSR|rcsb pdb:6YSS|rcsb pdb:6YST|rcsb pdb:6YSU|rcsb pdb:6ZTJ|rcsb pdb:6ZTL|rcsb pdb:6ZTM|rcsb pdb:6ZTN|rcsb pdb:6ZTO|rcsb pdb:6ZTP|rcsb pdb:6ZU1|rcsb pdb:7B5K|rcsb pdb:7BL2|rcsb pdb:7BL3|rcsb pdb:7BL4|rcsb pdb:7BL5|rcsb pdb:7BL6|rcsb pdb:7BV8|rcsb pdb:7D6Z|rcsb pdb:7D80|rcsb pdb:7JSS|rcsb pdb:7JSW|rcsb pdb:7JSZ|rcsb pdb:7JT1|rcsb pdb:7JT2|rcsb pdb:7JT3|refseq:WP_001196062.1|dip:DIP-35748N - - - figure legend:Figure 3 Table 3|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:+aDI9Lul/waD02DearR9oHO21hM83333 intact-crc:12D005EAA2C1AD0B|rigid:E0wRZGr2KXbyOSanNNLXsocCpQ4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0A915 uniprotkb:P0AC47 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 intact:EBI-906724|uniprotkb:P00364|uniprotkb:Q2M6E9|ensemblbacteria:AAC77113|ensemblbacteria:BAE78157 psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:frdb_ecoli(display_long)|uniprotkb:frdB(gene name)|psi-mi:frdB(display_short)|uniprotkb:Quinol-fumarate reductase iron-sulfur subunit(gene name synonym)|uniprotkb:JW4114(locus name)|uniprotkb:b4153(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212182|imex:IM-19194-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) refseq:NP_418577.1|refseq:WP_000829498.1|dip:DIP-9682N|ensemblbacteria:AAC77113(transcript)|ensemblbacteria:b4153(gene)|ensemblbacteria:BAE78157(gene)|ensemblbacteria:BAE78157(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006113"(fermentation)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|go:"GO:0051538"(3 iron, 4 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR001041(Ferredoxin)|interpro:IPR004489(Succinate dehydrogenase/fumarate reductase iron-sulphur protein)|interpro:IPR006058(2Fe-2S ferredoxin, iron-sulphur binding site)|interpro:IPR009051(Alpha-helical ferredoxin)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR017896|interpro:IPR017900|interpro:IPR025192|interpro:IPR036010|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S - - - figure legend:Figure 4 D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 rogid:6BEDH9lhrN3Ahc7QDc8KQG9AFZY83333 intact-crc:366AE8ABBC028AE8|rigid:9UdhlO/do2uutwPA9P4RdtOr9rA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0A915 uniprotkb:P0AFG9 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 intact:EBI-542695|uniprotkb:P06958|uniprotkb:P78049|uniprotkb:Q53382|ensemblbacteria:AAG54418|ensemblbacteria:BAB33541 psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:odp1_eco57(display_long)|uniprotkb:aceE(gene name)|psi-mi:aceE(display_short)|uniprotkb:Z0124(locus name)|uniprotkb:ECs0118(locus name) psi-mi:"MI:0006"(anti bait coimmunoprecipitation) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83334(eco57)|taxid:83334("Escherichia coli O157:H7") psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212182|imex:IM-19194-4 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) ensemblbacteria:AAG54418(transcript)|ensemblbacteria:BAB33541(transcript)|ensemblbacteria:ECs_0118(gene)|ensemblbacteria:Z0124(gene)|go:"GO:0004739"("pyruvate dehydrogenase (acetyl-transferring) activity")|go:"GO:0006096"(glycolytic process)|go:"GO:0046872"(metal ion binding)|refseq:NP_308145.1|interpro:IPR004660(2-oxo-acid dehydrogenase E1 component homodimeric type)|interpro:IPR009014(Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II)|interpro:IPR005474(Transketolase, N-terminal)|rcsb pdb:3LPL|rcsb pdb:3LQ2|rcsb pdb:3LQ4|refseq:WP_000003820.1|interpro:IPR035807|interpro:IPR029061|interpro:IPR041621 - - - figure legend:Figure 4 D|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 rogid:Mw8XYrFHqJcJIcvxe5fLBt8k65883334 intact-crc:366AE8ABBC028AE8|rigid:9UdhlO/do2uutwPA9P4RdtOr9rA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0AC47 uniprotkb:P0A915 intact:EBI-906724|uniprotkb:P00364|uniprotkb:Q2M6E9|ensemblbacteria:AAC77113|ensemblbacteria:BAE78157 intact:EBI-1132929|uniprotkb:P21364|uniprotkb:P97217|uniprotkb:P97220|ensemblbacteria:BAA14788|ensemblbacteria:AAC74338 psi-mi:frdb_ecoli(display_long)|uniprotkb:frdB(gene name)|psi-mi:frdB(display_short)|uniprotkb:Quinol-fumarate reductase iron-sulfur subunit(gene name synonym)|uniprotkb:JW4114(locus name)|uniprotkb:b4153(locus name) psi-mi:ompw_ecoli(display_long)|uniprotkb:yciD(gene name synonym)|uniprotkb:ompW(gene name)|psi-mi:ompW(display_short)|uniprotkb:b1256(locus name)|uniprotkb:JW1248(locus name) psi-mi:"MI:0047"(far western blotting) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212202|imex:IM-19194-5 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0496"(bait) psi-mi:"MI:0498"(prey) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418577.1|refseq:WP_000829498.1|dip:DIP-9682N|ensemblbacteria:AAC77113(transcript)|ensemblbacteria:b4153(gene)|ensemblbacteria:BAE78157(gene)|ensemblbacteria:BAE78157(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0006113"(fermentation)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0016020"(membrane)|go:"GO:0044780"(bacterial-type flagellum assembly)|go:"GO:0045284"(plasma membrane fumarate reductase complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|go:"GO:0051538"(3 iron, 4 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|go:"GO:0071973"(bacterial-type flagellum-dependent cell motility)|go:"GO:0102040"("fumarate reductase (menaquinone)")|interpro:IPR001041(Ferredoxin)|interpro:IPR004489(Succinate dehydrogenase/fumarate reductase iron-sulphur protein)|interpro:IPR006058(2Fe-2S ferredoxin, iron-sulphur binding site)|interpro:IPR009051(Alpha-helical ferredoxin)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR017896|interpro:IPR017900|interpro:IPR025192|interpro:IPR036010|rcsb pdb:1KF6|rcsb pdb:1KFY|rcsb pdb:1L0V|rcsb pdb:2B76|rcsb pdb:3CIR|rcsb pdb:3P4P|rcsb pdb:3P4Q|rcsb pdb:3P4R|rcsb pdb:3P4S refseq:WP_000737226.1|refseq:NP_415772.1|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR005618(Outer membrane protein, OmpW)|rcsb pdb:2F1T|rcsb pdb:2F1V|ensemblbacteria:AAC74338(transcript)|ensemblbacteria:b1256(gene)|ensemblbacteria:BAA14788(gene)|ensemblbacteria:BAA14788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0055085"(transmembrane transport) - - - figure legend:Figure 4 C|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:6BEDH9lhrN3Ahc7QDc8KQG9AFZY83333 rogid:kCUhMzf5/6qtUcyqGJHulTQk56E83333 intact-crc:5EE1EF37103751A4|rigid:WV9SSgUtyqx6seXQ/t0K7cfRKOo false - - - - psi-mi:"MI:0421"(identification by antibody) psi-mi:"MI:0421"(identification by antibody) uniprotkb:P77804 uniprotkb:P77804 intact:EBI-552466|uniprotkb:Q47707|ensemblbacteria:AAC74686|ensemblbacteria:BAA15362 intact:EBI-552466|uniprotkb:Q47707|ensemblbacteria:AAC74686|ensemblbacteria:BAA15362 psi-mi:ydga_ecoli(display_long)|uniprotkb:ydgA(gene name)|psi-mi:ydgA(display_short)|uniprotkb:b1614(locus name)|uniprotkb:JW1606(locus name) psi-mi:ydga_ecoli(display_long)|uniprotkb:ydgA(gene name)|psi-mi:ydgA(display_short)|uniprotkb:b1614(locus name)|uniprotkb:JW1606(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212216|imex:IM-19194-6 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416131.1|refseq:WP_001043339.1|dip:DIP-11709N|ensemblbacteria:AAC74686(transcript)|ensemblbacteria:b1614(gene)|ensemblbacteria:BAA15362(gene)|ensemblbacteria:BAA15362(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR010352(Protein of unknown function DUF945, bacterial) refseq:NP_416131.1|refseq:WP_001043339.1|dip:DIP-11709N|ensemblbacteria:AAC74686(transcript)|ensemblbacteria:b1614(gene)|ensemblbacteria:BAA15362(gene)|ensemblbacteria:BAA15362(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR010352(Protein of unknown function DUF945, bacterial) - - - figure legend:Figure 3 B|complex-properties:YdgA was reported to be oligomeric.|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:TvjP6Du0SKF0AnFT2P/Ox8+JE6I83333 rogid:TvjP6Du0SKF0AnFT2P/Ox8+JE6I83333 intact-crc:70656D1E1074D96E|rigid:weF8wVCm2slYCQ7W4YlWkeWczyY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P13035 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-548509|uniprotkb:P78115|uniprotkb:Q2M790|uniprotkb:Q47234|ensemblbacteria:AAC76451|ensemblbacteria:BAE77866 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:glpd_ecoli(display_long)|uniprotkb:glpD(gene name)|psi-mi:glpD(display_short)|uniprotkb:glyD(gene name synonym)|uniprotkb:b3426(locus name)|uniprotkb:JW3389(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212221|imex:IM-19194-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY refseq:NP_417884.1|refseq:WP_000448136.1|dip:DIP-9793N|ensemblbacteria:AAC76451(transcript)|ensemblbacteria:b3426(gene)|ensemblbacteria:BAE77866(gene)|ensemblbacteria:BAE77866(transcript)|go:"GO:0004368"("glycerol-3-phosphate dehydrogenase (quinone) activity")|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009055"(electron transfer activity)|go:"GO:0009331"(glycerol-3-phosphate dehydrogenase complex)|go:"GO:0019563"(glycerol catabolic process)|go:"GO:0046168"(glycerol-3-phosphate catabolic process)|go:"GO:0052590"("sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity")|go:"GO:0052591"("sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity")|go:"GO:0071949"(FAD binding)|interpro:IPR000447(FAD-dependent glycerol-3-phosphate dehydrogenase)|interpro:IPR006076(FAD dependent oxidoreductase)|interpro:IPR031656|interpro:IPR036188|interpro:IPR038299|rcsb pdb:2QCU|rcsb pdb:2R45|rcsb pdb:2R46|rcsb pdb:2R4E|rcsb pdb:2R4J - crc64:86F963E710553E22 crc64:1C4D341E9E4536AB figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:zQNScX2bR5Zqt2FNf2T+Yv8fuO083333 intact-crc:994A3355346F0682|rigid:9FIeiYmNv+vMGeNCEnpYYjOv9Vs false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P28635 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-1114713|ensemblbacteria:AAC73308|ensemblbacteria:BAA77874 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:metq_ecoli(display_long)|uniprotkb:metQ(gene name)|psi-mi:metQ(display_short)|uniprotkb:b0197(locus name)|uniprotkb:JW0193(locus name)|uniprotkb:yaeC(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212221|imex:IM-19194-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY refseq:WP_000874226.1|ensemblbacteria:AAC73308(transcript)|ensemblbacteria:b0197(gene)|ensemblbacteria:BAA77874(gene)|ensemblbacteria:BAA77874(transcript)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0046658"(anchored component of plasma membrane)|go:"GO:0048473"(D-methionine transport)|go:"GO:0055052"("ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing")|interpro:IPR004872(NLPA lipoprotein)|rcsb pdb:4YAH|rcsb pdb:6CVL|refseq:NP_414739.1|dip:DIP-11196N - crc64:86F963E710553E22 - figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:0I9WCTWquk4mQmBCTxHcI0v5D7w83333 intact-crc:994A3355346F0682|rigid:9FIeiYmNv+vMGeNCEnpYYjOv9Vs false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P37194 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-907245|uniprotkb:Q2M7G8|uniprotkb:P76709|ensemblbacteria:AAC76531|ensemblbacteria:BAE77788 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:slp_ecoli(display_long)|uniprotkb:slp(gene name)|psi-mi:slp(display_short)|uniprotkb:b3506(locus name)|uniprotkb:JW3474(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212221|imex:IM-19194-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY interpro:IPR004658(Outer membrane lipoprotein Slp)|refseq:NP_417963.4|refseq:WP_001350553.1|ensemblbacteria:AAC76531(transcript)|ensemblbacteria:b3506(gene)|ensemblbacteria:BAE77788(gene)|ensemblbacteria:BAE77788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0042802"(identical protein binding) - crc64:86F963E710553E22 - figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:crQUuQAx+2S35HrjXjpyKwB4y9Q83333 intact-crc:994A3355346F0682|rigid:9FIeiYmNv+vMGeNCEnpYYjOv9Vs false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69908 uniprotkb:P75818 intact:EBI-549505|uniprotkb:P80063|uniprotkb:Q2M7H9|ensemblbacteria:AAC76542|ensemblbacteria:BAE77777 intact:EBI-1212124|ensemblbacteria:AAC73952|ensemblbacteria:BAA35579 psi-mi:dcea_ecoli(display_long)|uniprotkb:gadA(gene name)|psi-mi:gadA(display_short)|uniprotkb:gadS(gene name synonym)|uniprotkb:b3517(locus name)|uniprotkb:JW3485(locus name) psi-mi:ybjp_ecoli(display_long)|uniprotkb:ybjP(gene name)|psi-mi:ybjP(display_short)|uniprotkb:b0865(locus name)|uniprotkb:JW0849(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212221|imex:IM-19194-7 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417974.1|refseq:WP_000372240.1|dip:DIP-36201N|mint:P69908|ensemblbacteria:AAC76542(transcript)|ensemblbacteria:b3517(gene)|ensemblbacteria:BAE77777(gene)|ensemblbacteria:BAE77777(transcript)|go:"GO:0004351"(glutamate decarboxylase activity)|go:"GO:0005829"(cytosol)|go:"GO:0006538"(glutamate catabolic process)|go:"GO:0016020"(membrane)|go:"GO:0030170"(pyridoxal phosphate binding)|go:"GO:0051454"(intracellular pH elevation)|interpro:IPR002129(Pyridoxal phosphate-dependent decarboxylase)|interpro:IPR010107(Glutamate decarboxylase)|interpro:IPR015421(Pyridoxal phosphate-dependent transferase, major region, subdomain 1)|interpro:IPR015424(Pyridoxal phosphate-dependent transferase, major region)|interpro:IPR021115|rcsb pdb:1XEY refseq:NP_415386.1|interpro:IPR024289|refseq:WP_001270734.1|ensemblbacteria:AAC73952(transcript)|ensemblbacteria:b0865(gene)|ensemblbacteria:BAA35579(gene)|ensemblbacteria:BAA35579(transcript)|go:"GO:0005886"(plasma membrane) - crc64:86F963E710553E22 - figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:ZUZwmAUW8Ht1UxqxsrSuhK08yT483333 rogid:SCM8lVE1rjsbuZJ2NWzita8DzZY83333 intact-crc:994A3355346F0682|rigid:9FIeiYmNv+vMGeNCEnpYYjOv9Vs false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0ABB4 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-368783|uniprotkb:P00824|uniprotkb:Q2M850|ensemblbacteria:AAC76755|ensemblbacteria:BAE77556 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpb_ecoli(display_long)|uniprotkb:atpD(gene name)|psi-mi:atpD(display_short)|uniprotkb:papB(gene name synonym)|uniprotkb:uncD(gene name synonym)|uniprotkb:b3732(locus name)|uniprotkb:JW3710(locus name)|uniprotkb:ATP synthase F1 sector subunit beta(gene name synonym)|uniprotkb:F-ATPase subunit beta(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212418|imex:IM-19194-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:WP_000190506.1|refseq:NP_418188.1|go:"GO:0005886"(plasma membrane)|go:"GO:0016020"(membrane)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005722(ATPase, F1 complex, beta subunit)|interpro:IPR020003|interpro:IPR024034|interpro:IPR027417|interpro:IPR036121|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|ensemblbacteria:AAC76755(transcript)|ensemblbacteria:b3732(gene)|ensemblbacteria:BAE77556(gene)|ensemblbacteria:BAE77556(transcript)|go:"GO:0005524"(ATP binding)|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|rcsb pdb:6OQT|mint:P0ABB4|dip:DIP-31846N - - - figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:7p8uAF1b7b/u6Sksgw1OXZy0NC483333 intact-crc:F5BDD2703F7AD289|rigid:giujFe3Mpth6DmZGOTf+P0/PelA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A6J5 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-1113690|uniprotkb:P29011|ensemblbacteria:AAC74273|ensemblbacteria:BAA36044 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:dada_ecoli(display_long)|uniprotkb:dadA(gene name)|psi-mi:dadA(display_short)|uniprotkb:dadR(gene name synonym)|uniprotkb:b1189(locus name)|uniprotkb:JW1178(locus name)|uniprotkb:D-alanine dehydrogenase(gene name synonym) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212418|imex:IM-19194-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_415707.1|refseq:WP_001266908.1|ensemblbacteria:AAC74273(transcript)|ensemblbacteria:b1189(gene)|ensemblbacteria:BAA36044(gene)|ensemblbacteria:BAA36044(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0008718"(D-amino-acid dehydrogenase activity)|go:"GO:0016491"(oxidoreductase activity)|go:"GO:0019480"(L-alanine oxidation to pyruvate via D-alanine)|go:"GO:0055130"(D-alanine catabolic process)|interpro:IPR006076(FAD dependent oxidoreductase)|interpro:IPR023080|interpro:IPR036188|dip:DIP-6852N - - - figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:yCoYN/jMP7RN17G3KeckQQkh1dg83333 intact-crc:F5BDD2703F7AD289|rigid:giujFe3Mpth6DmZGOTf+P0/PelA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0A7E1 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-554487|uniprotkb:P05021|ensemblbacteria:AAC74031|ensemblbacteria:BAA35700 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:pyrd_ecoli(display_long)|uniprotkb:Dihydroorotate oxidase(gene name synonym)|uniprotkb:DHOdehase(gene name synonym)|uniprotkb:pyrD(gene name)|psi-mi:pyrD(display_short)|uniprotkb:b0945(locus name)|uniprotkb:JW0928(locus name) psi-mi:"MI:0404"(comigration in non denaturing gel electrophoresis) Huang et al. (2006) pubmed:17137328|imex:IM-19194 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1212418|imex:IM-19194-8 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_415465.1|refseq:WP_001295352.1|dip:DIP-35945N|ensemblbacteria:AAC74031(transcript)|ensemblbacteria:b0945(gene)|ensemblbacteria:BAA35700(gene)|ensemblbacteria:BAA35700(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0006207"('de novo' pyrimidine nucleobase biosynthetic process)|go:"GO:0009220"(pyrimidine ribonucleotide biosynthetic process)|go:"GO:0010181"(FMN binding)|go:"GO:0016020"(membrane)|go:"GO:0044205"('de novo' UMP biosynthetic process)|interpro:IPR001295(Dihydroorotate dehydrogenase, core)|interpro:IPR005719(Dihydroorotate dehydrogenase, class 2)|interpro:IPR005720(Dihydroorotate dehydrogenase, class 1, core)|interpro:IPR012135(Dihydroorotate dehydrogenase, classes 1 and 2)|interpro:IPR013785(Aldolase-type TIM barrel)|rcsb pdb:1F76|go:"GO:0004152"(dihydroorotate dehydrogenase activity) - - crc64:973227EAE6B83622 figure legend:Figure 3 B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/07 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:WTtRhBgYzeNyVNK9YO6jSEhalxQ83333 intact-crc:F5BDD2703F7AD289|rigid:giujFe3Mpth6DmZGOTf+P0/PelA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry)