#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P07014 uniprotkb:P0AC41 intact:EBI-1035514|ensemblbacteria:AAC73818|ensemblbacteria:BAA35391 intact:EBI-371263|uniprotkb:P10444|uniprotkb:P78282|ensemblbacteria:AAC73817|ensemblbacteria:BAA35390 psi-mi:sdhb_ecoli(display_long)|uniprotkb:sdhB(gene name)|psi-mi:sdhB(display_short)|uniprotkb:b0724(locus name)|uniprotkb:JW0714(locus name) psi-mi:sdha_ecoli(display_long)|uniprotkb:sdhA(gene name)|psi-mi:sdhA(display_short)|uniprotkb:b0723(locus name)|uniprotkb:JW0713(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213174 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415252.1|refseq:WP_001235254.1|ensemblbacteria:AAC73818(transcript)|ensemblbacteria:b0724(gene)|ensemblbacteria:BAA35391(gene)|ensemblbacteria:BAA35391(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0008177"("succinate dehydrogenase (ubiquinone) activity")|go:"GO:0009055"(electron transfer activity)|go:"GO:0009060"(aerobic respiration)|go:"GO:0022904"(respiratory electron transport chain)|go:"GO:0046872"(metal ion binding)|go:"GO:0051536"(iron-sulfur cluster binding)|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|go:"GO:0051538"(3 iron, 4 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR001041(Ferredoxin)|interpro:IPR004489(Succinate dehydrogenase/fumarate reductase iron-sulphur protein)|interpro:IPR009051(Alpha-helical ferredoxin)|interpro:IPR012675(Beta-grasp fold, ferredoxin-type)|interpro:IPR017896|interpro:IPR017900|interpro:IPR025192|interpro:IPR036010|rcsb pdb:1NEK|rcsb pdb:1NEN|rcsb pdb:2ACZ|rcsb pdb:2AD0|rcsb pdb:2WDQ|rcsb pdb:2WDR|rcsb pdb:2WDV|rcsb pdb:2WP9|rcsb pdb:2WS3|rcsb pdb:2WU2|rcsb pdb:2WU5|rcsb pdb:7JZ2|dip:DIP-10836N refseq:WP_000775540.1|refseq:NP_415251.1|ensemblbacteria:AAC73817(transcript)|ensemblbacteria:b0723(gene)|ensemblbacteria:BAA35390(gene)|ensemblbacteria:BAA35390(transcript)|go:"GO:0000104"(succinate dehydrogenase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0006099"(tricarboxylic acid cycle)|go:"GO:0008177"("succinate dehydrogenase (ubiquinone) activity")|go:"GO:0009055"(electron transfer activity)|go:"GO:0009060"(aerobic respiration)|go:"GO:0009061"(anaerobic respiration)|go:"GO:0045282"(plasma membrane succinate dehydrogenase complex)|go:"GO:0050660"(flavin adenine dinucleotide binding)|interpro:IPR003952(Fumarate reductase/succinate dehydrogenase, FAD-binding site)|interpro:IPR003953(Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal)|interpro:IPR011281(Succinate dehydrogenase, flavoprotein subunit)|interpro:IPR014006(Succinate dehydrogenase or fumarate reductase, flavoprotein subunit)|interpro:IPR015939(Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal)|interpro:IPR027477|interpro:IPR036188|interpro:IPR037099|rcsb pdb:1NEK|rcsb pdb:1NEN|rcsb pdb:2ACZ|rcsb pdb:2AD0|rcsb pdb:2WDQ|rcsb pdb:2WDR|rcsb pdb:2WDV|rcsb pdb:2WP9|rcsb pdb:2WS3|rcsb pdb:2WU2|rcsb pdb:2WU5|rcsb pdb:7JZ2|mint:P0AC41|dip:DIP-31877N go:"GO:0045282"(plasma membrane succinate dehydrogenase complex) - - figure legend:Figure 3A|complex-properties:"The SdhA protein was judged to be 66 kDa and SdhB protein 26 kDa. Two other unidentified proteins that correspond in molecular mass to that predicted for SdhC (14 kDa) and SdhD (15 kDa) were also detected in the same channel."|comment:"The authors concluded that the succinate dehydrogenase complex was complete (consisting of SdhA, SdhB, SdhC and SdhD proteins)." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:v+Qd4uHttyDyhjtI99rbFAkaN9c83333 rogid:azW24uHg/gcOkCSv0XNuI1NhadY83333 intact-crc:8A7B14DD1FA81930|rigid:2yelJXltmlocoVIXBufhnryPQqE false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABJ9 uniprotkb:P0ABK2 intact:EBI-906928|uniprotkb:P11026|uniprotkb:P75754|uniprotkb:P76823|ensemblbacteria:AAC73827|ensemblbacteria:BAA35399 intact:EBI-1213195|uniprotkb:P11027|ensemblbacteria:AAC73828|ensemblbacteria:BAA35400 psi-mi:cyda_ecoli(display_long)|uniprotkb:cydA(gene name)|psi-mi:cydA(display_short)|uniprotkb:cyd-1(gene name synonym)|uniprotkb:b0733(locus name)|uniprotkb:Cytochrome d ubiquinol oxidase subunit I(gene name synonym)|uniprotkb:Cytochrome bd-I oxidase subunit I(gene name synonym)|uniprotkb:JW0722(locus name) psi-mi:cydb_ecoli(display_long)|uniprotkb:cydB(gene name)|psi-mi:cydB(display_short)|uniprotkb:cyd-2(gene name synonym)|uniprotkb:b0734(locus name)|uniprotkb:JW0723(locus name)|uniprotkb:Cytochrome d ubiquinol oxidase subunit II(gene name synonym)|uniprotkb:Cytochrome bd-I oxidase subunit II(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213228 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415261.2|refseq:WP_000884361.1|dip:DIP-36181N|ensemblbacteria:AAC73827(transcript)|ensemblbacteria:b0733(gene)|ensemblbacteria:BAA35399(gene)|ensemblbacteria:BAA35399(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009055"(electron transfer activity)|go:"GO:0016020"(membrane)|go:"GO:0016679"(oxidoreductase activity, acting on diphenols and related substances as donors)|go:"GO:0016682"(oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor)|go:"GO:0019646"(aerobic electron transport chain)|go:"GO:0020037"(heme binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0070069"(cytochrome complex)|interpro:IPR002585(Cytochrome bd ubiquinol oxidase, subunit I)|rcsb pdb:6RKO|rcsb pdb:6RX4 refseq:NP_415262.1|interpro:IPR003317(Cytochrome bd ubiquinol oxidase, subunit II)|refseq:WP_000568275.1|ensemblbacteria:AAC73828(transcript)|ensemblbacteria:b0734(gene)|ensemblbacteria:BAA35400(gene)|ensemblbacteria:BAA35400(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009055"(electron transfer activity)|go:"GO:0016020"(membrane)|go:"GO:0016682"(oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor)|go:"GO:0019646"(aerobic electron transport chain)|go:"GO:0020037"(heme binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0070069"(cytochrome complex)|rcsb pdb:6RKO|rcsb pdb:6RX4 go:"GO:0009319"(cytochrome o ubiquinol oxidase complex) - - figure legend:Figure 3B|complex-properties:The complex had an estimated molecular mass of approximately 118 kDa.|caution:Further studies by the author indicated this to be spurious interactions. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:pq9T4TrY7plPZChTDb34kBbhlgU83333 rogid:OnzxnVTFfxHvciz8TSjaXgxzz4Y83333 intact-crc:954B903BFB40F9BF|rigid:tnEisGaggqygeTv2dy0uDI6Qdvw false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABJ9 uniprotkb:P0ADW3 intact:EBI-906928|uniprotkb:P11026|uniprotkb:P75754|uniprotkb:P76823|ensemblbacteria:AAC73827|ensemblbacteria:BAA35399 intact:EBI-1213219|uniprotkb:P39436|uniprotkb:Q2M8Y0|ensemblbacteria:AAC76265|ensemblbacteria:BAE77276 psi-mi:cyda_ecoli(display_long)|uniprotkb:cydA(gene name)|psi-mi:cydA(display_short)|uniprotkb:cyd-1(gene name synonym)|uniprotkb:b0733(locus name)|uniprotkb:Cytochrome d ubiquinol oxidase subunit I(gene name synonym)|uniprotkb:Cytochrome bd-I oxidase subunit I(gene name synonym)|uniprotkb:JW0722(locus name) psi-mi:yhcb_ecoli(display_long)|uniprotkb:yhcB(gene name)|psi-mi:yhcB(display_short)|uniprotkb:b3233(locus name)|uniprotkb:JW5539(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213228 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415261.2|refseq:WP_000884361.1|dip:DIP-36181N|ensemblbacteria:AAC73827(transcript)|ensemblbacteria:b0733(gene)|ensemblbacteria:BAA35399(gene)|ensemblbacteria:BAA35399(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0009055"(electron transfer activity)|go:"GO:0016020"(membrane)|go:"GO:0016679"(oxidoreductase activity, acting on diphenols and related substances as donors)|go:"GO:0016682"(oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor)|go:"GO:0019646"(aerobic electron transport chain)|go:"GO:0020037"(heme binding)|go:"GO:0046872"(metal ion binding)|go:"GO:0070069"(cytochrome complex)|interpro:IPR002585(Cytochrome bd ubiquinol oxidase, subunit I)|rcsb pdb:6RKO|rcsb pdb:6RX4 refseq:NP_417700.2|refseq:WP_001295270.1|dip:DIP-39900N|ensemblbacteria:AAC76265(transcript)|ensemblbacteria:b3233(gene)|ensemblbacteria:BAE77276(gene)|ensemblbacteria:BAE77276(transcript)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|interpro:IPR009386(Protein of unknown function DUF1043) go:"GO:0009319"(cytochrome o ubiquinol oxidase complex) - - figure legend:Figure 3B|complex-properties:The complex had an estimated molecular mass of approximately 118 kDa.|caution:Further studies by the author indicated this to be spurious interactions. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:pq9T4TrY7plPZChTDb34kBbhlgU83333 rogid:qYzuxms5tee0mAHt4B082QJAHp883333 intact-crc:954B903BFB40F9BF|rigid:tnEisGaggqygeTv2dy0uDI6Qdvw false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P33602 uniprotkb:P33599 intact:EBI-559737|uniprotkb:P76489|uniprotkb:P78184|uniprotkb:P78185|ensemblbacteria:AAC75343|ensemblbacteria:BAA16111 intact:EBI-552399|uniprotkb:P33600|uniprotkb:P78089|uniprotkb:P78309|ensemblbacteria:AAC75346|ensemblbacteria:BAA16115 psi-mi:nuog_ecoli(display_long)|uniprotkb:NADH dehydrogenase I subunit G(gene name synonym)|uniprotkb:NDH-1 subunit G(gene name synonym)|uniprotkb:NUO7(gene name synonym)|uniprotkb:nuoG(gene name)|psi-mi:nuoG(display_short)|uniprotkb:b2283(locus name)|uniprotkb:JW2278(locus name) psi-mi:nuocd_ecoli(display_long)|uniprotkb:nuoC(gene name)|psi-mi:nuoC(display_short)|uniprotkb:nuoCD(gene name synonym)|uniprotkb:nuoD(gene name synonym)|uniprotkb:b2286(locus name)|uniprotkb:NADH dehydrogenase I subunit C/D(gene name synonym)|uniprotkb:NDH-1 subunit C/D(gene name synonym)|uniprotkb:NUO3/NUO4(gene name synonym)|uniprotkb:JW5375(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213235 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416786.4|refseq:WP_000190939.1|dip:DIP-10383N|ensemblbacteria:AAC75343(transcript)|ensemblbacteria:b2283(gene)|ensemblbacteria:BAA16111(gene)|ensemblbacteria:BAA16111(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0009060"(aerobic respiration)|go:"GO:0030964"(NADH dehydrogenase complex)|go:"GO:0042773"(ATP synthesis coupled electron transport)|go:"GO:0043546"(molybdopterin cofactor binding)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0045333"(cellular respiration)|go:"GO:0046872"(metal ion binding)|go:"GO:0048038"(quinone binding)|go:"GO:0051537"(2 iron, 2 sulfur cluster binding)|go:"GO:0051539"(4 iron, 4 sulfur cluster binding)|interpro:IPR000283(NADH dehydrogenase 75 kDa subunit, conserved site)|interpro:IPR001041(Ferredoxin)|interpro:IPR006656(Molybdopterin oxidoreductase)|interpro:IPR006657(Molydopterin dinucleotide-binding region)|interpro:IPR006963(Molybdopterin oxidoreductase Fe4S4 region)|interpro:IPR009010(Aspartate decarboxylase-like fold)|interpro:IPR010228(NADH-quinone oxidoreductase, chain G)|interpro:IPR019574|interpro:IPR036010 refseq:NP_416789.2|dip:DIP-10380N|mint:P33599|ensemblbacteria:AAC75346(transcript)|ensemblbacteria:b2286(gene)|ensemblbacteria:BAA16115(gene)|ensemblbacteria:BAA16115(transcript)|go:"GO:0005737"(cytoplasm)|go:"GO:0005886"(plasma membrane)|go:"GO:0008137"("NADH dehydrogenase (ubiquinone) activity")|go:"GO:0016020"(membrane)|go:"GO:0030964"(NADH dehydrogenase complex)|go:"GO:0045272"(plasma membrane respiratory chain complex I)|go:"GO:0048038"(quinone binding)|go:"GO:0051287"(NAD binding)|interpro:IPR001135(NADH-ubiquinone oxidoreductase, chain 49kDa)|interpro:IPR001268("NADH dehydrogenase (ubiquinone), 30 kDa subunit")|interpro:IPR010218("NADH (or F420H2) dehydrogenase, subunit C")|interpro:IPR014029(NADH-ubiquinone oxidoreductase, chain 49kDa, conserved site)|interpro:IPR020396|interpro:IPR022885|interpro:IPR023062|interpro:IPR029014|interpro:IPR037232 - - - figure legend:Figure 2A|complex-properties:The 404-kDa subcomplex contained the NuoCD protein and a 135-kDa complex contained the 90-kDa NuoG subunit taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:ujTrKRJbGlImf+zA+VA9AXpfZ8A83333 rogid:kl70ebART2nwizurDMkJl/Da84M83333 intact-crc:108658B9DFFC33A4|rigid:GN4e7G217IwPFd00L7bYv/hUeqU false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0ABB4 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-368783|uniprotkb:P00824|uniprotkb:Q2M850|ensemblbacteria:AAC76755|ensemblbacteria:BAE77556 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpb_ecoli(display_long)|uniprotkb:atpD(gene name)|psi-mi:atpD(display_short)|uniprotkb:papB(gene name synonym)|uniprotkb:uncD(gene name synonym)|uniprotkb:b3732(locus name)|uniprotkb:JW3710(locus name)|uniprotkb:ATP synthase F1 sector subunit beta(gene name synonym)|uniprotkb:F-ATPase subunit beta(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213240 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:WP_000190506.1|refseq:NP_418188.1|go:"GO:0005886"(plasma membrane)|go:"GO:0016020"(membrane)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR003593(AAA+ ATPase, core)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005722(ATPase, F1 complex, beta subunit)|interpro:IPR020003|interpro:IPR024034|interpro:IPR027417|interpro:IPR036121|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|ensemblbacteria:AAC76755(transcript)|ensemblbacteria:b3732(gene)|ensemblbacteria:BAE77556(gene)|ensemblbacteria:BAE77556(transcript)|go:"GO:0005524"(ATP binding)|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|rcsb pdb:6OQT|mint:P0ABB4|dip:DIP-31846N go:"GO:0045259"(proton-transporting ATP synthase complex) - - figure legend:Figure 3A|caution:The accession number given in the text is for protein subunit atpE is incorrect. The correct accession number was obtained from UniProt.|complex-properties:"The complex was estimated to have a molecualr mass of 439kDa. We were able to identify subunit c (11 kDa), subunit b (18 kDa), the alpha-subunit (54 kDa), the beta-subunit(51 kDa), and the gamma-subunit (29 kDa) (Fig. 3A). Other protein spots were detected that corresponded in molecular mass to subunit a (30 kDa), the theta-subunit (19 kDa), and the epsilon-subunit (15 kDa), and we conclude that the F1-F0-ATP synthase is intact." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:7p8uAF1b7b/u6Sksgw1OXZy0NC483333 intact-crc:B2E3958C44CE676E|rigid:8BeFKMjqxxJLkqaQn2M4praqVJY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0ABA0 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-1131012|uniprotkb:P00859|uniprotkb:Q2M854|ensemblbacteria:AAC76759|ensemblbacteria:BAE77552 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpf_ecoli(display_long)|uniprotkb:atpF(gene name)|psi-mi:atpF(display_short)|uniprotkb:papF(gene name synonym)|uniprotkb:uncF(gene name synonym)|uniprotkb:b3736(locus name)|uniprotkb:JW3714(locus name)|uniprotkb:"ATP synthase F(0) sector subunit b"(gene name synonym)|uniprotkb:F-type ATPase subunit b(gene name synonym)|uniprotkb:ATPase subunit I(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213240 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:WP_001052219.1|ensemblbacteria:AAC76759(transcript)|ensemblbacteria:b3736(gene)|ensemblbacteria:BAE77552(gene)|ensemblbacteria:BAE77552(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045263"("proton-transporting ATP synthase complex, coupling factor F(o)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR002146(ATPase, F0 complex, subunit B/B', bacterial and chloroplast)|interpro:IPR005864(ATPase, F0 complex, subunit B, bacterial)|interpro:IPR028987|rcsb pdb:1B9U|rcsb pdb:1L2P|rcsb pdb:2KHK|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6VWK|rcsb pdb:6WNQ|rcsb pdb:6WNR|refseq:NP_418192.1|dip:DIP-35994N go:"GO:0045259"(proton-transporting ATP synthase complex) - - figure legend:Figure 3A|caution:The accession number given in the text is for protein subunit atpE is incorrect. The correct accession number was obtained from UniProt.|complex-properties:"The complex was estimated to have a molecualr mass of 439kDa. We were able to identify subunit c (11 kDa), subunit b (18 kDa), the alpha-subunit (54 kDa), the beta-subunit(51 kDa), and the gamma-subunit (29 kDa) (Fig. 3A). Other protein spots were detected that corresponded in molecular mass to subunit a (30 kDa), the theta-subunit (19 kDa), and the epsilon-subunit (15 kDa), and we conclude that the F1-F0-ATP synthase is intact." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:bFuC9XFUzmUzJLVZwYJbXqFGAXw83333 intact-crc:B2E3958C44CE676E|rigid:8BeFKMjqxxJLkqaQn2M4praqVJY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P0ABA6 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-544306|uniprotkb:P00837|uniprotkb:P00838|uniprotkb:Q2M851|ensemblbacteria:AAC76756|ensemblbacteria:BAE77555 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpg_ecoli(display_long)|uniprotkb:atpG(gene name)|psi-mi:atpG(display_short)|uniprotkb:papC(gene name synonym)|uniprotkb:uncG(gene name synonym)|uniprotkb:b3733(locus name)|uniprotkb:ATP synthase F1 sector gamma subunit(gene name synonym)|uniprotkb:JW3711(locus name)|uniprotkb:F-ATPase gamma subunit(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213240 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:NP_418189.1|ensemblbacteria:AAC76756(transcript)|ensemblbacteria:b3733(gene)|ensemblbacteria:BAE77555(gene)|ensemblbacteria:BAE77555(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0042777"(plasma membrane ATP synthesis coupled proton transport)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000131(ATPase, F1 complex, gamma subunit)|interpro:IPR023632|interpro:IPR035968|rcsb pdb:1D8S|rcsb pdb:1FS0|rcsb pdb:3OAA|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|refseq:WP_000896498.1|dip:DIP-35938N go:"GO:0045259"(proton-transporting ATP synthase complex) - - figure legend:Figure 3A|caution:The accession number given in the text is for protein subunit atpE is incorrect. The correct accession number was obtained from UniProt.|complex-properties:"The complex was estimated to have a molecualr mass of 439kDa. We were able to identify subunit c (11 kDa), subunit b (18 kDa), the alpha-subunit (54 kDa), the beta-subunit(51 kDa), and the gamma-subunit (29 kDa) (Fig. 3A). Other protein spots were detected that corresponded in molecular mass to subunit a (30 kDa), the theta-subunit (19 kDa), and the epsilon-subunit (15 kDa), and we conclude that the F1-F0-ATP synthase is intact." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:mXmh0app7UB2MkuFeXtJQfYukFU83333 intact-crc:B2E3958C44CE676E|rigid:8BeFKMjqxxJLkqaQn2M4praqVJY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ABB0 uniprotkb:P68699 intact:EBI-368707|uniprotkb:P00822|uniprotkb:Q2M852|uniprotkb:Q47249|ensemblbacteria:AAC76757|ensemblbacteria:BAE77554 intact:EBI-1121219|uniprotkb:P00844|uniprotkb:Q2M855|ensemblbacteria:AAC76760|ensemblbacteria:BAE77551 psi-mi:atpa_ecoli(display_long)|uniprotkb:atpA(gene name)|psi-mi:atpA(display_short)|uniprotkb:papA(gene name synonym)|uniprotkb:uncA(gene name synonym)|uniprotkb:b3734(locus name)|uniprotkb:JW3712(locus name)|uniprotkb:ATP synthase F1 sector subunit alpha(gene name synonym)|uniprotkb:F-ATPase subunit alpha(gene name synonym) psi-mi:atpl_ecoli(display_long)|uniprotkb:Lipid-binding protein(gene name synonym)|uniprotkb:Dicyclohexylcarbodiimide-binding protein(gene name synonym)|uniprotkb:atpE(gene name)|psi-mi:atpE(display_short)|uniprotkb:papH(gene name synonym)|uniprotkb:uncE(gene name synonym)|uniprotkb:b3737(locus name)|uniprotkb:JW3715(locus name)|uniprotkb:"ATP synthase F(0) sector subunit c"(gene name synonym)|uniprotkb:F-type ATPase subunit c(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213240 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001176745.1|refseq:NP_418190.1|ensemblbacteria:AAC76757(transcript)|ensemblbacteria:b3734(gene)|ensemblbacteria:BAE77554(gene)|ensemblbacteria:BAE77554(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005886"(plasma membrane)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016020"(membrane)|go:"GO:0043531"(ADP binding)|go:"GO:0045261"("proton-transporting ATP synthase complex, catalytic core F(1)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000194(ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding)|interpro:IPR000793(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal)|interpro:IPR004100(ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal)|interpro:IPR005294(ATPase, F1 complex, alpha subunit)|interpro:IPR020003|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|interpro:IPR023366|interpro:IPR027417|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6WNQ|rcsb pdb:6WNR|interpro:IPR033732|interpro:IPR036121|interpro:IPR038376|rcsb pdb:1D8S|rcsb pdb:3OAA|rcsb pdb:5T4O|mint:P0ABB0|dip:DIP-31845N refseq:WP_000429386.1|ensemblbacteria:AAC76760(transcript)|ensemblbacteria:b3737(gene)|ensemblbacteria:BAE77551(gene)|ensemblbacteria:BAE77551(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0008289"(lipid binding)|go:"GO:0015986"(ATP synthesis coupled proton transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0045263"("proton-transporting ATP synthase complex, coupling factor F(o)")|go:"GO:0046933"(proton-transporting ATP synthase activity, rotational mechanism)|go:"GO:0046961"(proton-transporting ATPase activity, rotational mechanism)|interpro:IPR000454(ATPase, F0 complex, subunit C)|interpro:IPR002379(ATPase, F0/V0 complex, subunit C)|interpro:IPR005953(ATPase, F0 complex, subunit C, bacterial and chloroplast)|interpro:IPR020537|interpro:IPR035921|interpro:IPR038662|rcsb pdb:1A91|rcsb pdb:6OQW|rcsb pdb:6PQV|rcsb pdb:6VWK|rcsb pdb:6WNQ|rcsb pdb:6WNR|rcsb pdb:1ATY|rcsb pdb:1C0V|rcsb pdb:1C17|rcsb pdb:1C99|rcsb pdb:1IJP|rcsb pdb:1J7F|rcsb pdb:1L6T|rcsb pdb:1QO1|rcsb pdb:4UTQ|rcsb pdb:5T4O|rcsb pdb:5T4P|rcsb pdb:5T4Q|rcsb pdb:6OQR|rcsb pdb:6OQS|rcsb pdb:6OQT|rcsb pdb:6OQU|rcsb pdb:6OQV|refseq:NP_418193.1|dip:DIP-2198N go:"GO:0045259"(proton-transporting ATP synthase complex) - - figure legend:Figure 3A|caution:The accession number given in the text is for protein subunit atpE is incorrect. The correct accession number was obtained from UniProt.|complex-properties:"The complex was estimated to have a molecualr mass of 439kDa. We were able to identify subunit c (11 kDa), subunit b (18 kDa), the alpha-subunit (54 kDa), the beta-subunit(51 kDa), and the gamma-subunit (29 kDa) (Fig. 3A). Other protein spots were detected that corresponded in molecular mass to subunit a (30 kDa), the theta-subunit (19 kDa), and the epsilon-subunit (15 kDa), and we conclude that the F1-F0-ATP synthase is intact." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:vQkK+LkeRxrUUGpk5FlRgyeibCI83333 rogid:H6DUOjvvYInz6g6Z5i7USAMSbc083333 intact-crc:B2E3958C44CE676E|rigid:8BeFKMjqxxJLkqaQn2M4praqVJY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P09127 uniprotkb:P09127 intact:EBI-1128342|uniprotkb:Q2M8A8|ensemblbacteria:AAC76806|ensemblbacteria:BAE77498 intact:EBI-1128342|uniprotkb:Q2M8A8|ensemblbacteria:AAC76806|ensemblbacteria:BAE77498 psi-mi:hemx_ecoli(display_long)|uniprotkb:hemX(gene name)|psi-mi:hemX(display_short)|uniprotkb:b3803(locus name)|uniprotkb:JW3775(locus name)|uniprotkb:ORF X(gene name synonym) psi-mi:hemx_ecoli(display_long)|uniprotkb:hemX(gene name)|psi-mi:hemX(display_short)|uniprotkb:b3803(locus name)|uniprotkb:JW3775(locus name)|uniprotkb:ORF X(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213249 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418247.1|refseq:WP_000138997.1|interpro:IPR007470(HemX)|ensemblbacteria:AAC76806(transcript)|ensemblbacteria:b3803(gene)|ensemblbacteria:BAE77498(gene)|ensemblbacteria:BAE77498(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|dip:DIP-9888N refseq:NP_418247.1|refseq:WP_000138997.1|interpro:IPR007470(HemX)|ensemblbacteria:AAC76806(transcript)|ensemblbacteria:b3803(gene)|ensemblbacteria:BAE77498(gene)|ensemblbacteria:BAE77498(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0016021"(integral component of membrane)|dip:DIP-9888N go:"GO:0042802"(identical protein binding) - - figure legend:Figure 2A Supplemental Figure 2|complex-properties:HemX exists as a homo-oligomer, possibly a homopentamer. HemX was detected as a 208kDa complex. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:c++84TsKnfa+b+lqVQLhqU7fYJY83333 rogid:c++84TsKnfa+b+lqVQLhqU7fYJY83333 intact-crc:6ECB7BD10228DE3C|rigid:+VOUnL1vbSj/ZJVn95ZysDsoCts false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ADY1 uniprotkb:P0ADY1 intact:EBI-562001|uniprotkb:P77241|ensemblbacteria:AAC73544|ensemblbacteria:BAE76221|uniprotkb:Q2MBY5 intact:EBI-562001|uniprotkb:P77241|ensemblbacteria:AAC73544|ensemblbacteria:BAE76221|uniprotkb:Q2MBY5 psi-mi:ppid_ecoli(display_long)|uniprotkb:ybaU(gene name synonym)|uniprotkb:ppiD(gene name)|psi-mi:ppiD(display_short)|uniprotkb:b0441(locus name)|uniprotkb:JW0431(locus name)|uniprotkb:Periplasmic folding chaperone(gene name synonym) psi-mi:ppid_ecoli(display_long)|uniprotkb:ybaU(gene name synonym)|uniprotkb:ppiD(gene name)|psi-mi:ppiD(display_short)|uniprotkb:b0441(locus name)|uniprotkb:JW0431(locus name)|uniprotkb:Periplasmic folding chaperone(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213254 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAC73544(transcript)|ensemblbacteria:b0441(gene)|ensemblbacteria:BAE76221(gene)|ensemblbacteria:BAE76221(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0071575"(integral component of external side of plasma membrane)|interpro:IPR000297(Peptidyl-prolyl cis-trans isomerase, PpiC-type)|interpro:IPR023058|interpro:IPR027304|rcsb pdb:2KGJ|refseq:NP_414975.1|refseq:WP_000969372.1|dip:DIP-39902N ensemblbacteria:AAC73544(transcript)|ensemblbacteria:b0441(gene)|ensemblbacteria:BAE76221(gene)|ensemblbacteria:BAE76221(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0071575"(integral component of external side of plasma membrane)|interpro:IPR000297(Peptidyl-prolyl cis-trans isomerase, PpiC-type)|interpro:IPR023058|interpro:IPR027304|rcsb pdb:2KGJ|refseq:NP_414975.1|refseq:WP_000969372.1|dip:DIP-39902N - - - figure legend:Figure 2A Supplemental Figure 2A|complex-properties:PpiD was present as a trimer.The 68-kDa PpiD protein was identified in two higher molecular mass complexes with estimated molecular masses of 156 and 104 kDa. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:Gi/Nr3hWjfI8ddGcWbpbTR9Wshw83333 rogid:Gi/Nr3hWjfI8ddGcWbpbTR9Wshw83333 intact-crc:33405AC988319DE0|rigid:ydZYTTxVXDg+gDgvZzGdIKiut6Y false - - 3 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ADY1 uniprotkb:P0ADY1 intact:EBI-562001|uniprotkb:P77241|ensemblbacteria:AAC73544|ensemblbacteria:BAE76221|uniprotkb:Q2MBY5 intact:EBI-562001|uniprotkb:P77241|ensemblbacteria:AAC73544|ensemblbacteria:BAE76221|uniprotkb:Q2MBY5 psi-mi:ppid_ecoli(display_long)|uniprotkb:ybaU(gene name synonym)|uniprotkb:ppiD(gene name)|psi-mi:ppiD(display_short)|uniprotkb:b0441(locus name)|uniprotkb:JW0431(locus name)|uniprotkb:Periplasmic folding chaperone(gene name synonym) psi-mi:ppid_ecoli(display_long)|uniprotkb:ybaU(gene name synonym)|uniprotkb:ppiD(gene name)|psi-mi:ppiD(display_short)|uniprotkb:b0441(locus name)|uniprotkb:JW0431(locus name)|uniprotkb:Periplasmic folding chaperone(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213259 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblbacteria:AAC73544(transcript)|ensemblbacteria:b0441(gene)|ensemblbacteria:BAE76221(gene)|ensemblbacteria:BAE76221(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0071575"(integral component of external side of plasma membrane)|interpro:IPR000297(Peptidyl-prolyl cis-trans isomerase, PpiC-type)|interpro:IPR023058|interpro:IPR027304|rcsb pdb:2KGJ|refseq:NP_414975.1|refseq:WP_000969372.1|dip:DIP-39902N ensemblbacteria:AAC73544(transcript)|ensemblbacteria:b0441(gene)|ensemblbacteria:BAE76221(gene)|ensemblbacteria:BAE76221(transcript)|go:"GO:0003755"(peptidyl-prolyl cis-trans isomerase activity)|go:"GO:0042802"(identical protein binding)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0071575"(integral component of external side of plasma membrane)|interpro:IPR000297(Peptidyl-prolyl cis-trans isomerase, PpiC-type)|interpro:IPR023058|interpro:IPR027304|rcsb pdb:2KGJ|refseq:NP_414975.1|refseq:WP_000969372.1|dip:DIP-39902N - - - figure legend:Figure 2A Supplemental Figure 2A|complex-properties:PpiD is present as a dimer. The 68-kDa PpiD protein in two higher molecular mass complexes with estimated molecular masses of 156 and 104 kDa. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:Gi/Nr3hWjfI8ddGcWbpbTR9Wshw83333 rogid:Gi/Nr3hWjfI8ddGcWbpbTR9Wshw83333 intact-crc:B8E703E2B6F1670A|rigid:ydZYTTxVXDg+gDgvZzGdIKiut6Y false - - 2 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P30845 uniprotkb:P77173 intact:EBI-548171|uniprotkb:P76793|uniprotkb:Q2M6J0|ensemblbacteria:AAC77075|ensemblbacteria:BAE78116 intact:EBI-1029213|ensemblbacteria:AAC75465|ensemblbacteria:BAA16284 psi-mi:epta_ecoli(display_long)|uniprotkb:pmrC(gene name synonym)|uniprotkb:yjdB(gene name synonym)|uniprotkb:eptA(gene name)|psi-mi:eptA(display_short)|uniprotkb:b4114(locus name)|uniprotkb:JW5730(locus name)|uniprotkb:Polymyxin resistance protein PmrC(gene name synonym) psi-mi:zipa_ecoli(display_long)|uniprotkb:zipA(gene name)|psi-mi:zipA(display_short)|uniprotkb:FtsZ interacting protein A(gene name synonym)|uniprotkb:JW2404(locus name)|uniprotkb:b2412(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213264 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418538.2|refseq:WP_000919792.1|dip:DIP-12561N|ensemblbacteria:AAC77075(transcript)|ensemblbacteria:b4114(gene)|ensemblbacteria:BAE78116(gene)|ensemblbacteria:BAE78116(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0008484"(sulfuric ester hydrolase activity)|go:"GO:0009103"(lipopolysaccharide biosynthetic process)|go:"GO:0009244"(lipopolysaccharide core region biosynthetic process)|go:"GO:0009245"(lipid A biosynthetic process)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016776"(phosphotransferase activity, phosphate group as acceptor)|go:"GO:0046677"(response to antibiotic)|interpro:IPR000917(Sulphatase)|interpro:IPR012549(Protein of unknown function DUF1705)|interpro:IPR017850(Alkaline-phosphatase-like, core domain)|interpro:IPR040423 refseq:NP_416907.1|ensemblbacteria:AAC75465(transcript)|ensemblbacteria:b2412(gene)|ensemblbacteria:BAA16284(gene)|ensemblbacteria:BAA16284(transcript)|go:"GO:0000917"(division septum assembly)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0032153"(cell division site)|go:"GO:0043093"(FtsZ-dependent cytokinesis)|interpro:IPR007449(ZipA, C-terminal FtsZ-binding region)|interpro:IPR011919(Cell division protein ZipA)|interpro:IPR036765|rcsb pdb:1F46|rcsb pdb:1F47|rcsb pdb:1F7W|rcsb pdb:1F7X|rcsb pdb:1S1J|rcsb pdb:1S1S|rcsb pdb:1Y2F|rcsb pdb:1Y2G|refseq:WP_001300494.1|dip:DIP-1157N - - - figure legend:Figure 4A|comment:A 24-kDa interacting partner could not be identified by mass spectrometry.|complex-properties:"The ZipA (36 kDa) protein was shown to interact with YjdB (61 kDa) and a 24 kDa protein which could not be identified. The molecular mass of this protein was estimated to be 91 kDa."|caution:Further studies by the author indicated this to be spurious interactions. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:0ddKPdK6+88+WocW9QVn0gvyMKY83333 rogid:g6iE8MFg5mmjIBGtd0o6yNriudM83333 intact-crc:51ECB615D89DCA04|rigid:tGLICVxXrzlH/MkZOHcB54y11vI false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P76372 uniprotkb:P76372 intact:EBI-1213270|uniprotkb:O07997|uniprotkb:O07998|uniprotkb:P77049|ensemblbacteria:AAC75088|ensemblbacteria:BAA15859 intact:EBI-1213270|uniprotkb:O07997|uniprotkb:O07998|uniprotkb:P77049|ensemblbacteria:AAC75088|ensemblbacteria:BAA15859 psi-mi:wzzb_ecoli(display_long)|uniprotkb:wzzB(gene name)|psi-mi:wzzB(display_short)|uniprotkb:cld(gene name synonym)|uniprotkb:rol(gene name synonym)|uniprotkb:wzz(gene name synonym)|uniprotkb:b2027(locus name)|uniprotkb:JW5836(locus name)|uniprotkb:Polysaccharide antigen chain regulator(gene name synonym) psi-mi:wzzb_ecoli(display_long)|uniprotkb:wzzB(gene name)|psi-mi:wzzB(display_short)|uniprotkb:cld(gene name synonym)|uniprotkb:rol(gene name synonym)|uniprotkb:wzz(gene name synonym)|uniprotkb:b2027(locus name)|uniprotkb:JW5836(locus name)|uniprotkb:Polysaccharide antigen chain regulator(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213283 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:6RBG|interpro:IPR003856(Lipopolysaccharide biosynthesis)|refseq:NP_416531.4|ensemblbacteria:AAC75088(transcript)|ensemblbacteria:b2027(gene)|ensemblbacteria:BAA15859(gene)|ensemblbacteria:BAA15859(transcript)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0009103"(lipopolysaccharide biosynthetic process)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001393575.1 rcsb pdb:6RBG|interpro:IPR003856(Lipopolysaccharide biosynthesis)|refseq:NP_416531.4|ensemblbacteria:AAC75088(transcript)|ensemblbacteria:b2027(gene)|ensemblbacteria:BAA15859(gene)|ensemblbacteria:BAA15859(transcript)|go:"GO:0004713"(protein tyrosine kinase activity)|go:"GO:0005886"(plasma membrane)|go:"GO:0009103"(lipopolysaccharide biosynthetic process)|go:"GO:0016021"(integral component of membrane)|refseq:WP_001393575.1 - - - figure legend:Figure 2A Supplementary Figure 2|complex-properties:WzzB is present as a dimer. The moecular mass was estimated as 70 kDa. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:mw6PIqshITMS8diFgYZaA25b3r483333 rogid:mw6PIqshITMS8diFgYZaA25b3r483333 intact-crc:6D7F219F4F2FE514|rigid:v54R0OBLMl4FdUeNZbgBAkXc4e8 false - - 2 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0ADZ7 uniprotkb:P0ADZ7 intact:EBI-1130723|uniprotkb:P19677|uniprotkb:Q2MC19|ensemblbacteria:AAC73510|ensemblbacteria:BAE76187 intact:EBI-1130723|uniprotkb:P19677|uniprotkb:Q2MC19|ensemblbacteria:AAC73510|ensemblbacteria:BAE76187 psi-mi:yajc_ecoli(display_long)|uniprotkb:yajC(gene name)|psi-mi:yajC(display_short)|uniprotkb:b0407(locus name)|uniprotkb:JW0397(locus name) psi-mi:yajc_ecoli(display_long)|uniprotkb:yajC(gene name)|psi-mi:yajC(display_short)|uniprotkb:b0407(locus name)|uniprotkb:JW0397(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213288 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000007629.1|ensemblbacteria:AAC73510(transcript)|ensemblbacteria:b0407(gene)|ensemblbacteria:BAE76187(gene)|ensemblbacteria:BAE76187(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015031"(protein transport)|interpro:IPR003849(YajC)|rcsb pdb:2RDD|refseq:NP_414941.1|dip:DIP-29531N refseq:WP_000007629.1|ensemblbacteria:AAC73510(transcript)|ensemblbacteria:b0407(gene)|ensemblbacteria:BAE76187(gene)|ensemblbacteria:BAE76187(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015031"(protein transport)|interpro:IPR003849(YajC)|rcsb pdb:2RDD|refseq:NP_414941.1|dip:DIP-29531N - - - figure legend:Figure 2A Supplemental Figure 2|complex-properties:YajC was present as an homoligomeric complex of molecualr mass 56 kDa. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:YRSrPPaPuQ8rtrfjDQ0QFTbDZKQ83333 rogid:YRSrPPaPuQ8rtrfjDQ0QFTbDZKQ83333 intact-crc:F417473C47899DB3|rigid:JHFhf3eqdKKvD1I4fue8dAH4mPE false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P10408 uniprotkb:P10408 intact:EBI-543213|uniprotkb:P75642|ensemblbacteria:AAC73209|ensemblbacteria:BAB96666 intact:EBI-543213|uniprotkb:P75642|ensemblbacteria:AAC73209|ensemblbacteria:BAB96666 psi-mi:seca_ecoli(display_long)|uniprotkb:secA(gene name)|psi-mi:secA(display_short)|uniprotkb:azi(gene name synonym)|uniprotkb:pea(gene name synonym)|uniprotkb:prlD(gene name synonym)|uniprotkb:b0098(locus name)|uniprotkb:JW0096(locus name) psi-mi:seca_ecoli(display_long)|uniprotkb:secA(gene name)|psi-mi:secA(display_short)|uniprotkb:azi(gene name synonym)|uniprotkb:pea(gene name synonym)|uniprotkb:prlD(gene name synonym)|uniprotkb:b0098(locus name)|uniprotkb:JW0096(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213293 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414640.1|refseq:WP_000905789.1|ensemblbacteria:AAC73209(transcript)|ensemblbacteria:b0098(gene)|ensemblbacteria:BAB96666(gene)|ensemblbacteria:BAB96666(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006605"(protein targeting)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008564"(protein-exporting ATPase activity)|go:"GO:0015031"(protein transport)|go:"GO:0015462"(ABC-type protein transporter activity)|go:"GO:0017038"(protein import)|go:"GO:0031522"(cell envelope Sec protein transport complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043952"(protein transport by the Sec complex)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0065002"(intracellular protein transmembrane transport)|go:"GO:0070678"(preprotein binding)|interpro:IPR000185(SecA protein)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004027(SEC-C motif)|interpro:IPR011115(SecA DEAD-like)|interpro:IPR011116(SecA Wing and Scaffold)|interpro:IPR011130(SecA preprotein cross-linking region)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014018(SecA motor DEAD)|interpro:IPR020937|interpro:IPR027417|interpro:IPR036266|interpro:IPR036670|interpro:IPR044722|rcsb pdb:1TM6|rcsb pdb:2FSF|rcsb pdb:2FSG|rcsb pdb:2FSH|rcsb pdb:2FSI|rcsb pdb:2VDA|rcsb pdb:3BXZ|rcsb pdb:6GOX|dip:DIP-10840N refseq:NP_414640.1|refseq:WP_000905789.1|ensemblbacteria:AAC73209(transcript)|ensemblbacteria:b0098(gene)|ensemblbacteria:BAB96666(gene)|ensemblbacteria:BAB96666(transcript)|go:"GO:0005524"(ATP binding)|go:"GO:0005737"(cytoplasm)|go:"GO:0005829"(cytosol)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006605"(protein targeting)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008564"(protein-exporting ATPase activity)|go:"GO:0015031"(protein transport)|go:"GO:0015462"(ABC-type protein transporter activity)|go:"GO:0017038"(protein import)|go:"GO:0031522"(cell envelope Sec protein transport complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0043952"(protein transport by the Sec complex)|go:"GO:0061077"(chaperone-mediated protein folding)|go:"GO:0065002"(intracellular protein transmembrane transport)|go:"GO:0070678"(preprotein binding)|interpro:IPR000185(SecA protein)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR004027(SEC-C motif)|interpro:IPR011115(SecA DEAD-like)|interpro:IPR011116(SecA Wing and Scaffold)|interpro:IPR011130(SecA preprotein cross-linking region)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014018(SecA motor DEAD)|interpro:IPR020937|interpro:IPR027417|interpro:IPR036266|interpro:IPR036670|interpro:IPR044722|rcsb pdb:1TM6|rcsb pdb:2FSF|rcsb pdb:2FSG|rcsb pdb:2FSH|rcsb pdb:2FSI|rcsb pdb:2VDA|rcsb pdb:3BXZ|rcsb pdb:6GOX|dip:DIP-10840N - - - complex-properties:SecA protein was shown to be a dimer with molecular mass 200 kDa.|figure legend:Figure 4C taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:yulYx4jc3iGczAjpx1NdEIupGKw83333 rogid:yulYx4jc3iGczAjpx1NdEIupGKw83333 intact-crc:A3DDC2531353070E|rigid:RfE3SyX2mWiRf70vh5HIwFqzsBY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P00803 uniprotkb:P00803 intact:EBI-1213299|uniprotkb:P78098|uniprotkb:Q2MAG2|ensemblbacteria:AAC75621|ensemblbacteria:BAE76744 intact:EBI-1213299|uniprotkb:P78098|uniprotkb:Q2MAG2|ensemblbacteria:AAC75621|ensemblbacteria:BAE76744 psi-mi:lep_ecoli(display_long)|uniprotkb:lepB(gene name)|psi-mi:lepB(display_short)|uniprotkb:b2568(locus name)|uniprotkb:JW2552(locus name)|uniprotkb:Leader peptidase I(gene name synonym) psi-mi:lep_ecoli(display_long)|uniprotkb:lepB(gene name)|psi-mi:lepB(display_short)|uniprotkb:b2568(locus name)|uniprotkb:JW2552(locus name)|uniprotkb:Leader peptidase I(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213311 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:1B12|rcsb pdb:1KN9|refseq:NP_417063.1|interpro:IPR000223(Peptidase S26A, signal peptidase I)|interpro:IPR019758|interpro:IPR019757|interpro:IPR019756|interpro:IPR019533|rcsb pdb:1T7D|rcsb pdb:3IIQ|rcsb pdb:6B88|rcsb pdb:3S04|refseq:WP_000002541.1|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006465"(signal peptide processing)|go:"GO:0006508"(proteolysis)|go:"GO:0008233"(peptidase activity)|go:"GO:0015643"(toxic substance binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016485"(protein processing)|go:"GO:0005886"(plasma membrane)|ensemblbacteria:AAC75621(transcript)|ensemblbacteria:b2568(gene)|ensemblbacteria:BAE76744(gene)|ensemblbacteria:BAE76744(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004252"(serine-type endopeptidase activity)|interpro:IPR036286|interpro:IPR019766 rcsb pdb:1B12|rcsb pdb:1KN9|refseq:NP_417063.1|interpro:IPR000223(Peptidase S26A, signal peptidase I)|interpro:IPR019758|interpro:IPR019757|interpro:IPR019756|interpro:IPR019533|rcsb pdb:1T7D|rcsb pdb:3IIQ|rcsb pdb:6B88|rcsb pdb:3S04|refseq:WP_000002541.1|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006465"(signal peptide processing)|go:"GO:0006508"(proteolysis)|go:"GO:0008233"(peptidase activity)|go:"GO:0015643"(toxic substance binding)|go:"GO:0016021"(integral component of membrane)|go:"GO:0016485"(protein processing)|go:"GO:0005886"(plasma membrane)|ensemblbacteria:AAC75621(transcript)|ensemblbacteria:b2568(gene)|ensemblbacteria:BAE76744(gene)|ensemblbacteria:BAE76744(transcript)|go:"GO:0004175"(endopeptidase activity)|go:"GO:0004252"(serine-type endopeptidase activity)|interpro:IPR036286|interpro:IPR019766 - - - complex-properties:"LepB protein (P00803) was thought to be present as a dimer with a molecular mass of 60 kDa."|figure legend:Figure 4D taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:7LC5Ehug09T0Pg3dU8A1UuJYatw83333 rogid:7LC5Ehug09T0Pg3dU8A1UuJYatw83333 intact-crc:25EB09B0CEFF175C|rigid:O0YgxXWi0ygE+PhgyPKvhggBns8 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P07117 uniprotkb:P07117 intact:EBI-1213317|ensemblbacteria:AAC74100|ensemblbacteria:BAA35793 intact:EBI-1213317|ensemblbacteria:AAC74100|ensemblbacteria:BAA35793 psi-mi:putp_ecoli(display_long)|uniprotkb:putP(gene name)|psi-mi:putP(display_short)|uniprotkb:b1015(locus name)|uniprotkb:JW1001(locus name)|uniprotkb:Propionate transporter(gene name synonym)|uniprotkb:Proline permease(gene name synonym) psi-mi:putp_ecoli(display_long)|uniprotkb:putP(gene name)|psi-mi:putP(display_short)|uniprotkb:b1015(locus name)|uniprotkb:JW1001(locus name)|uniprotkb:Propionate transporter(gene name synonym)|uniprotkb:Proline permease(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213325 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_415535.1|interpro:IPR011851(Sodium/proline symporter)|interpro:IPR001734(Na+/solute symporter)|interpro:IPR018212|refseq:WP_001018479.1|interpro:IPR038377|ensemblbacteria:AAC74100(transcript)|ensemblbacteria:b1015(gene)|ensemblbacteria:BAA35793(gene)|ensemblbacteria:BAA35793(transcript)|go:"GO:0005298"("proline:sodium symporter activity")|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015824"(proline transport)|go:"GO:0015912"(short-chain fatty acid transport)|go:"GO:0031402"(sodium ion binding)|go:"GO:0035524"(proline transmembrane transport) refseq:NP_415535.1|interpro:IPR011851(Sodium/proline symporter)|interpro:IPR001734(Na+/solute symporter)|interpro:IPR018212|refseq:WP_001018479.1|interpro:IPR038377|ensemblbacteria:AAC74100(transcript)|ensemblbacteria:b1015(gene)|ensemblbacteria:BAA35793(gene)|ensemblbacteria:BAA35793(transcript)|go:"GO:0005298"("proline:sodium symporter activity")|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015824"(proline transport)|go:"GO:0015912"(short-chain fatty acid transport)|go:"GO:0031402"(sodium ion binding)|go:"GO:0035524"(proline transmembrane transport) - - - complex-properties:The putP protein appeared to be a dimer with molecular mass 80 kDa.|figure legend:Figure 2A Supplemental Figure 2 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:UbIZrb9JmFbATaBZOQd+/8Ylwl483333 rogid:UbIZrb9JmFbATaBZOQd+/8Ylwl483333 intact-crc:4B9233DD0AA2F304|rigid:QaxMJ9/RZulRxxbc4aJbhvXWJ0Y false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P32705 uniprotkb:P32705 intact:EBI-555929|uniprotkb:Q2M6N7|ensemblbacteria:AAC77037|ensemblbacteria:BAE78069 intact:EBI-555929|uniprotkb:Q2M6N7|ensemblbacteria:AAC77037|ensemblbacteria:BAE78069 psi-mi:actp_ecoli(display_long)|uniprotkb:yjcG(gene name synonym)|uniprotkb:Acetate transporter ActP(gene name synonym)|uniprotkb:Acetate permease(gene name synonym)|uniprotkb:actP(gene name)|psi-mi:actP(display_short)|uniprotkb:b4067(locus name)|uniprotkb:JW4028(locus name) psi-mi:actp_ecoli(display_long)|uniprotkb:yjcG(gene name synonym)|uniprotkb:Acetate transporter ActP(gene name synonym)|uniprotkb:Acetate permease(gene name synonym)|uniprotkb:actP(gene name)|psi-mi:actP(display_short)|uniprotkb:b4067(locus name)|uniprotkb:JW4028(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213331 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_418491.1|refseq:WP_000832573.1|dip:DIP-12552N|ensemblbacteria:AAC77037(transcript)|ensemblbacteria:b4067(gene)|ensemblbacteria:BAE78069(gene)|ensemblbacteria:BAE78069(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006814"(sodium ion transport)|go:"GO:0006847"(plasma membrane acetate transport)|go:"GO:0015123"(acetate transmembrane transporter activity)|go:"GO:0015293"(symporter activity)|go:"GO:0015654"(tellurite transmembrane transporter activity)|go:"GO:0015710"(tellurite transport)|go:"GO:0043879"(glycolate transmembrane transporter activity)|interpro:IPR001734(Na+/solute symporter)|interpro:IPR014083(Cation/acetate symporter ActP)|interpro:IPR018212|interpro:IPR038377 refseq:NP_418491.1|refseq:WP_000832573.1|dip:DIP-12552N|ensemblbacteria:AAC77037(transcript)|ensemblbacteria:b4067(gene)|ensemblbacteria:BAE78069(gene)|ensemblbacteria:BAE78069(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0006814"(sodium ion transport)|go:"GO:0006847"(plasma membrane acetate transport)|go:"GO:0015123"(acetate transmembrane transporter activity)|go:"GO:0015293"(symporter activity)|go:"GO:0015654"(tellurite transmembrane transporter activity)|go:"GO:0015710"(tellurite transport)|go:"GO:0043879"(glycolate transmembrane transporter activity)|interpro:IPR001734(Na+/solute symporter)|interpro:IPR014083(Cation/acetate symporter ActP)|interpro:IPR018212|interpro:IPR038377 - - - complex-properties:The AtcP protein appeared to be dimeric the molecular mass was estimated as 90 kDa.|figure legend:Figure 2A Supplemental Figure 2 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:IxCTKF6CayhnSYSKpg+x7sqSXu083333 rogid:IxCTKF6CayhnSYSKpg+x7sqSXu083333 intact-crc:01EBDD0E4DDBB194|rigid:q/DkZJSJ6nALcETUz28voTFRW6E false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P31224 uniprotkb:P31224 intact:EBI-551006|uniprotkb:Q2MBW5|ensemblbacteria:AAC73564|ensemblbacteria:BAE76241 intact:EBI-551006|uniprotkb:Q2MBW5|ensemblbacteria:AAC73564|ensemblbacteria:BAE76241 psi-mi:acrb_ecoli(display_long)|uniprotkb:acrB(gene name)|psi-mi:acrB(display_short)|uniprotkb:acrE(gene name synonym)|uniprotkb:b0462(locus name)|uniprotkb:JW0451(locus name)|uniprotkb:AcrAB-TolC multidrug efflux pump subunit AcrB(gene name synonym)|uniprotkb:Acridine resistance protein B(gene name synonym) psi-mi:acrb_ecoli(display_long)|uniprotkb:acrB(gene name)|psi-mi:acrB(display_short)|uniprotkb:acrE(gene name synonym)|uniprotkb:b0462(locus name)|uniprotkb:JW0451(locus name)|uniprotkb:AcrAB-TolC multidrug efflux pump subunit AcrB(gene name synonym)|uniprotkb:Acridine resistance protein B(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213338 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414995.1|refseq:WP_001132469.1|dip:DIP-9049N|ensemblbacteria:AAC73564(transcript)|ensemblbacteria:b0462(gene)|ensemblbacteria:BAE76241(gene)|ensemblbacteria:BAE76241(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0016020"(membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:1990281"(efflux pump complex)|interpro:IPR001036(Acriflavin resistance protein)|interpro:IPR004764(Hydrophobe/amphiphile efflux-1 HAE1)|interpro:IPR027463|rcsb pdb:1IWG|rcsb pdb:1OY6|rcsb pdb:1OY8|rcsb pdb:1OY9|rcsb pdb:1OYD|rcsb pdb:1OYE|rcsb pdb:1T9T|rcsb pdb:1T9U|rcsb pdb:1T9V|rcsb pdb:1T9W|rcsb pdb:1T9X|rcsb pdb:1T9Y|rcsb pdb:2DHH|rcsb pdb:2DR6|rcsb pdb:2DRD|rcsb pdb:2GIF|rcsb pdb:2HQC|rcsb pdb:2HQD|rcsb pdb:2HQF|rcsb pdb:2HQG|rcsb pdb:2HRT|rcsb pdb:2I6W|rcsb pdb:2J8S|rcsb pdb:2RDD|rcsb pdb:2W1B|rcsb pdb:3AOA|rcsb pdb:3AOB|rcsb pdb:3AOC|rcsb pdb:3AOD|rcsb pdb:3D9B|rcsb pdb:3NOC|rcsb pdb:3NOG|rcsb pdb:3W9H|rcsb pdb:4C48|rcsb pdb:4CDI|rcsb pdb:4DX5|rcsb pdb:4DX6|rcsb pdb:4DX7|rcsb pdb:4K7Q|rcsb pdb:4U8V|rcsb pdb:4U8Y|rcsb pdb:4U95|rcsb pdb:4U96|rcsb pdb:4ZIT|rcsb pdb:4ZIV|rcsb pdb:4ZIW|rcsb pdb:4ZJL|rcsb pdb:4ZJO|rcsb pdb:4ZJQ|rcsb pdb:4ZLJ|rcsb pdb:4ZLL|rcsb pdb:4ZLN|rcsb pdb:5EN5|rcsb pdb:5ENO|rcsb pdb:5ENP|rcsb pdb:5ENQ|rcsb pdb:5ENR|rcsb pdb:5ENS|rcsb pdb:5ENT|rcsb pdb:5JMN|rcsb pdb:5NC5|rcsb pdb:5NG5|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:5YIL|rcsb pdb:6BAJ|rcsb pdb:6CSX|rcsb pdb:6Q4N|rcsb pdb:6Q4O|rcsb pdb:6Q4P|rcsb pdb:6SGR|rcsb pdb:6SGS|rcsb pdb:6SGT|rcsb pdb:6SGU|rcsb pdb:6ZO5|rcsb pdb:6ZO6|rcsb pdb:6ZO7|rcsb pdb:6ZO8|rcsb pdb:6ZO9|rcsb pdb:6ZOA|rcsb pdb:6ZOB|rcsb pdb:6ZOC|rcsb pdb:6ZOD|rcsb pdb:6ZOE|rcsb pdb:6ZOF|rcsb pdb:6ZOG|rcsb pdb:6ZOH refseq:NP_414995.1|refseq:WP_001132469.1|dip:DIP-9049N|ensemblbacteria:AAC73564(transcript)|ensemblbacteria:b0462(gene)|ensemblbacteria:BAE76241(gene)|ensemblbacteria:BAE76241(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0016020"(membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:1990281"(efflux pump complex)|interpro:IPR001036(Acriflavin resistance protein)|interpro:IPR004764(Hydrophobe/amphiphile efflux-1 HAE1)|interpro:IPR027463|rcsb pdb:1IWG|rcsb pdb:1OY6|rcsb pdb:1OY8|rcsb pdb:1OY9|rcsb pdb:1OYD|rcsb pdb:1OYE|rcsb pdb:1T9T|rcsb pdb:1T9U|rcsb pdb:1T9V|rcsb pdb:1T9W|rcsb pdb:1T9X|rcsb pdb:1T9Y|rcsb pdb:2DHH|rcsb pdb:2DR6|rcsb pdb:2DRD|rcsb pdb:2GIF|rcsb pdb:2HQC|rcsb pdb:2HQD|rcsb pdb:2HQF|rcsb pdb:2HQG|rcsb pdb:2HRT|rcsb pdb:2I6W|rcsb pdb:2J8S|rcsb pdb:2RDD|rcsb pdb:2W1B|rcsb pdb:3AOA|rcsb pdb:3AOB|rcsb pdb:3AOC|rcsb pdb:3AOD|rcsb pdb:3D9B|rcsb pdb:3NOC|rcsb pdb:3NOG|rcsb pdb:3W9H|rcsb pdb:4C48|rcsb pdb:4CDI|rcsb pdb:4DX5|rcsb pdb:4DX6|rcsb pdb:4DX7|rcsb pdb:4K7Q|rcsb pdb:4U8V|rcsb pdb:4U8Y|rcsb pdb:4U95|rcsb pdb:4U96|rcsb pdb:4ZIT|rcsb pdb:4ZIV|rcsb pdb:4ZIW|rcsb pdb:4ZJL|rcsb pdb:4ZJO|rcsb pdb:4ZJQ|rcsb pdb:4ZLJ|rcsb pdb:4ZLL|rcsb pdb:4ZLN|rcsb pdb:5EN5|rcsb pdb:5ENO|rcsb pdb:5ENP|rcsb pdb:5ENQ|rcsb pdb:5ENR|rcsb pdb:5ENS|rcsb pdb:5ENT|rcsb pdb:5JMN|rcsb pdb:5NC5|rcsb pdb:5NG5|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:5YIL|rcsb pdb:6BAJ|rcsb pdb:6CSX|rcsb pdb:6Q4N|rcsb pdb:6Q4O|rcsb pdb:6Q4P|rcsb pdb:6SGR|rcsb pdb:6SGS|rcsb pdb:6SGT|rcsb pdb:6SGU|rcsb pdb:6ZO5|rcsb pdb:6ZO6|rcsb pdb:6ZO7|rcsb pdb:6ZO8|rcsb pdb:6ZO9|rcsb pdb:6ZOA|rcsb pdb:6ZOB|rcsb pdb:6ZOC|rcsb pdb:6ZOD|rcsb pdb:6ZOE|rcsb pdb:6ZOF|rcsb pdb:6ZOG|rcsb pdb:6ZOH - - - complex-properties:ArcB complex was shown to be trimeric, moecular mass was estimated at 342 kDa.|figure legend:Figure 5|caution:"The participant EBI-551006(P31224) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:c4g5xahCoi9NOgjxyZoC8WzQpnc83333 rogid:c4g5xahCoi9NOgjxyZoC8WzQpnc83333 intact-crc:9CBB0D4AF8E1EB9A|rigid:6xRTgf7/utLyOx56ebRHPAKnN3A false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0AE06 uniprotkb:P0AE06 intact:EBI-875601|uniprotkb:P31223|uniprotkb:Q2MBW4|ensemblbacteria:AAC73565|ensemblbacteria:BAE76242 intact:EBI-875601|uniprotkb:P31223|uniprotkb:Q2MBW4|ensemblbacteria:AAC73565|ensemblbacteria:BAE76242 psi-mi:acra_ecoli(display_long)|uniprotkb:acrA(gene name)|psi-mi:acrA(display_short)|uniprotkb:lir(gene name synonym)|uniprotkb:mtcA(gene name synonym)|uniprotkb:b0463(locus name)|uniprotkb:JW0452(locus name)|uniprotkb:AcrAB-TolC multidrug efflux pump subunit AcrA(gene name synonym)|uniprotkb:Acridine resistance protein A(gene name synonym) psi-mi:acra_ecoli(display_long)|uniprotkb:acrA(gene name)|psi-mi:acrA(display_short)|uniprotkb:lir(gene name synonym)|uniprotkb:mtcA(gene name synonym)|uniprotkb:b0463(locus name)|uniprotkb:JW0452(locus name)|uniprotkb:AcrAB-TolC multidrug efflux pump subunit AcrA(gene name synonym)|uniprotkb:Acridine resistance protein A(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213353 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414996.1|refseq:WP_001295324.1|dip:DIP-29039N|ensemblbacteria:AAC73565(transcript)|ensemblbacteria:b0463(gene)|ensemblbacteria:BAE76242(gene)|ensemblbacteria:BAE76242(transcript)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic)|go:"GO:1990281"(efflux pump complex)|interpro:IPR006143(Secretion protein HlyD)|interpro:IPR032317|interpro:IPR043602|rcsb pdb:2F1M|rcsb pdb:5NG5|rcsb pdb:5O66|rcsb pdb:5V5S refseq:NP_414996.1|refseq:WP_001295324.1|dip:DIP-29039N|ensemblbacteria:AAC73565(transcript)|ensemblbacteria:b0463(gene)|ensemblbacteria:BAE76242(gene)|ensemblbacteria:BAE76242(transcript)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic)|go:"GO:1990281"(efflux pump complex)|interpro:IPR006143(Secretion protein HlyD)|interpro:IPR032317|interpro:IPR043602|rcsb pdb:2F1M|rcsb pdb:5NG5|rcsb pdb:5O66|rcsb pdb:5V5S - crc64:5B81DD5BC2B0A077 crc64:5B81DD5BC2B0A077 complex-properties:ArcA complex was shown to be trimeric, molecular mass was estimated at 115 kDa.|figure legend:Figure 5|caution:"The participant EBI-875601(P0AE06) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:SAeFuPoeyyXFuBiQN5ZAQH5f5W883333 rogid:SAeFuPoeyyXFuBiQN5ZAQH5f5W883333 intact-crc:E799D9BA619B1AB7|rigid:KiltC+lzX9A7t+9ldXTu9Mj2/F0 false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P37636 uniprotkb:P37636 intact:EBI-1133856|uniprotkb:Q2M7H5|ensemblbacteria:AAC76538|ensemblbacteria:BAE77781 intact:EBI-1133856|uniprotkb:Q2M7H5|ensemblbacteria:AAC76538|ensemblbacteria:BAE77781 psi-mi:mdte_ecoli(display_long)|uniprotkb:yhiU(gene name synonym)|uniprotkb:mdtE(gene name)|psi-mi:mdtE(display_short)|uniprotkb:b3513(locus name)|uniprotkb:JW3481(locus name) psi-mi:mdte_ecoli(display_long)|uniprotkb:yhiU(gene name synonym)|uniprotkb:mdtE(gene name)|psi-mi:mdtE(display_short)|uniprotkb:b3513(locus name)|uniprotkb:JW3481(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213360 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_001081984.1|interpro:IPR032317|interpro:IPR006143(Secretion protein HlyD)|refseq:NP_417970.1|ensemblbacteria:AAC76538(transcript)|ensemblbacteria:b3513(gene)|ensemblbacteria:BAE77781(gene)|ensemblbacteria:BAE77781(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic)|interpro:IPR043602 refseq:WP_001081984.1|interpro:IPR032317|interpro:IPR006143(Secretion protein HlyD)|refseq:NP_417970.1|ensemblbacteria:AAC76538(transcript)|ensemblbacteria:b3513(gene)|ensemblbacteria:BAE77781(gene)|ensemblbacteria:BAE77781(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0031226"(intrinsic component of plasma membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic)|interpro:IPR043602 - - - complex-properties:MtdE complex was shown to be trimeric, molecualar mass was estimated at 343 kDa.|figure legend:Figure 5|caution:"The participant EBI-1133856(P37636) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:+kTuTDgUggCMTo5mqyVUhqHW88g83333 rogid:+kTuTDgUggCMTo5mqyVUhqHW88g83333 intact-crc:F67D2935EFD8C120|rigid:GONyieff3MMerUXnsFEgJsyGUO8 false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P37637 uniprotkb:P37637 intact:EBI-906890|uniprotkb:Q2M7H6|ensemblbacteria:AAC76539|ensemblbacteria:BAE77780 intact:EBI-906890|uniprotkb:Q2M7H6|ensemblbacteria:AAC76539|ensemblbacteria:BAE77780 psi-mi:mdtf_ecoli(display_long)|uniprotkb:mdtF(gene name)|psi-mi:mdtF(display_short)|uniprotkb:b3514(locus name)|uniprotkb:yhiV(gene name synonym)|uniprotkb:JW3482(locus name) psi-mi:mdtf_ecoli(display_long)|uniprotkb:mdtF(gene name)|psi-mi:mdtF(display_short)|uniprotkb:b3514(locus name)|uniprotkb:yhiV(gene name synonym)|uniprotkb:JW3482(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213367 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417971.1|interpro:IPR001036(Acriflavin resistance protein)|interpro:IPR004764(Hydrophobe/amphiphile efflux-1 HAE1)|refseq:WP_000024872.1|interpro:IPR027463|ensemblbacteria:AAC76539(transcript)|ensemblbacteria:b3514(gene)|ensemblbacteria:BAE77780(gene)|ensemblbacteria:BAE77780(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0006855"(xenobiotic transmembrane transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic) refseq:NP_417971.1|interpro:IPR001036(Acriflavin resistance protein)|interpro:IPR004764(Hydrophobe/amphiphile efflux-1 HAE1)|refseq:WP_000024872.1|interpro:IPR027463|ensemblbacteria:AAC76539(transcript)|ensemblbacteria:b3514(gene)|ensemblbacteria:BAE77780(gene)|ensemblbacteria:BAE77780(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0006855"(xenobiotic transmembrane transport)|go:"GO:0009636"(response to toxic substance)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042908"(xenobiotic transport)|go:"GO:0042910"(xenobiotic transmembrane transporter activity)|go:"GO:0046677"(response to antibiotic) - - - complex-properties:MtdF complex was shown to be trimeric, molecualr mass was esimated at 114 kDa.|figure legend:Figure 5|caution:"The participant EBI-906890(P37637) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:iLkVf6oIu8Rv4Iwp7IbbUQTxsUs83333 rogid:iLkVf6oIu8Rv4Iwp7IbbUQTxsUs83333 intact-crc:F146CC36512671FA|rigid:Uz/4o7N9hKGEKqVRQGoUxafXJl8 false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0C0S1 uniprotkb:P0C0S1 intact:EBI-554616|uniprotkb:P11666|uniprotkb:Q2M9R8|ensemblbacteria:AAC75961|ensemblbacteria:BAE76988 intact:EBI-554616|uniprotkb:P11666|uniprotkb:Q2M9R8|ensemblbacteria:AAC75961|ensemblbacteria:BAE76988 psi-mi:mscs_ecoli(display_long)|uniprotkb:yggB(gene name synonym)|uniprotkb:mscS(gene name)|psi-mi:mscS(display_short)|uniprotkb:b2924(locus name)|uniprotkb:JW2891(locus name) psi-mi:mscs_ecoli(display_long)|uniprotkb:yggB(gene name synonym)|uniprotkb:mscS(gene name)|psi-mi:mscS(display_short)|uniprotkb:b2924(locus name)|uniprotkb:JW2891(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213374 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417399.1|refseq:WP_000389818.1|dip:DIP-36192N|ensemblbacteria:AAC75961(transcript)|ensemblbacteria:b2924(gene)|ensemblbacteria:BAE76988(gene)|ensemblbacteria:BAE76988(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008381"(mechanosensitive ion channel activity)|go:"GO:0009992"(cellular water homeostasis)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042802"(identical protein binding)|go:"GO:0051260"(protein homooligomerization)|interpro:IPR006685(Mechanosensitive ion channel MscS)|interpro:IPR006686(Mechanosensitive ion channel MscS, conserved site)|interpro:IPR008910(Conserved TM helix)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR011014(Mechanosensitive ion channel MscS, transmembrane-2)|interpro:IPR011066(Mechanosensitive ion channel MscS, C-terminal)|interpro:IPR023408|rcsb pdb:2OAU|rcsb pdb:2VV5|rcsb pdb:3UDC|rcsb pdb:4AGE|rcsb pdb:4AGF|rcsb pdb:4HWA|rcsb pdb:5AJI|rcsb pdb:6PWN|rcsb pdb:6PWO|rcsb pdb:6PWP|rcsb pdb:6RLD|rcsb pdb:6UZH refseq:NP_417399.1|refseq:WP_000389818.1|dip:DIP-36192N|ensemblbacteria:AAC75961(transcript)|ensemblbacteria:b2924(gene)|ensemblbacteria:BAE76988(gene)|ensemblbacteria:BAE76988(transcript)|go:"GO:0005887"(integral component of plasma membrane)|go:"GO:0008381"(mechanosensitive ion channel activity)|go:"GO:0009992"(cellular water homeostasis)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042802"(identical protein binding)|go:"GO:0051260"(protein homooligomerization)|interpro:IPR006685(Mechanosensitive ion channel MscS)|interpro:IPR006686(Mechanosensitive ion channel MscS, conserved site)|interpro:IPR008910(Conserved TM helix)|interpro:IPR010920(Like-Sm ribonucleoprotein-related, core)|interpro:IPR011014(Mechanosensitive ion channel MscS, transmembrane-2)|interpro:IPR011066(Mechanosensitive ion channel MscS, C-terminal)|interpro:IPR023408|rcsb pdb:2OAU|rcsb pdb:2VV5|rcsb pdb:3UDC|rcsb pdb:4AGE|rcsb pdb:4AGF|rcsb pdb:4HWA|rcsb pdb:5AJI|rcsb pdb:6PWN|rcsb pdb:6PWO|rcsb pdb:6PWP|rcsb pdb:6RLD|rcsb pdb:6UZH - - - complex-properties:MscS complex was shown to be homotepameric, molecualr mass was estimated as 242 kDa.|figure legend:Figure 2A Supplemental Figure 2 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:almpxY5F3EuqrQBMciA6kLz9/LQ83333 rogid:almpxY5F3EuqrQBMciA6kLz9/LQ83333 intact-crc:C09F99FA69980C6B|rigid:Knto8BoljtW2ZSY3A/eDXyFuTEQ false - - 7 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0AAA1 uniprotkb:P0AAA1 intact:EBI-1213387|uniprotkb:P77262|uniprotkb:Q2MCD5|ensemblbacteria:AAC73390|ensemblbacteria:BAE76071 intact:EBI-1213387|uniprotkb:P77262|uniprotkb:Q2MCD5|ensemblbacteria:AAC73390|ensemblbacteria:BAE76071 psi-mi:yagu_ecoli(display_long)|uniprotkb:yagU(gene name)|psi-mi:yagU(display_short)|uniprotkb:b0287(locus name)|uniprotkb:JW0281(locus name) psi-mi:yagu_ecoli(display_long)|uniprotkb:yagU(gene name)|psi-mi:yagU(display_short)|uniprotkb:b0287(locus name)|uniprotkb:JW0281(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213396 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR009898(Protein of unknown function DUF1440)|refseq:NP_414821.1|refseq:WP_001019920.1|ensemblbacteria:AAC73390(transcript)|ensemblbacteria:b0287(gene)|ensemblbacteria:BAE76071(gene)|ensemblbacteria:BAE76071(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0010447"(response to acidic pH)|go:"GO:0016021"(integral component of membrane) interpro:IPR009898(Protein of unknown function DUF1440)|refseq:NP_414821.1|refseq:WP_001019920.1|ensemblbacteria:AAC73390(transcript)|ensemblbacteria:b0287(gene)|ensemblbacteria:BAE76071(gene)|ensemblbacteria:BAE76071(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0010447"(response to acidic pH)|go:"GO:0016021"(integral component of membrane) - - - complex-properties:The YagU protein complex was shoown to be dimeric, molecualr mass was estimated as 47 kDa.|figure legend:Figure 2A Supplemental Figure 2. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:HrdoKSM+8AtPeLScUCuoOSDa8M483333 rogid:HrdoKSM+8AtPeLScUCuoOSDa8M483333 intact-crc:61D3085691F2E518|rigid:pe1wF/TnoAXNZ+7r1YLImSx4xoY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P77804 uniprotkb:P77804 intact:EBI-552466|uniprotkb:Q47707|ensemblbacteria:AAC74686|ensemblbacteria:BAA15362 intact:EBI-552466|uniprotkb:Q47707|ensemblbacteria:AAC74686|ensemblbacteria:BAA15362 psi-mi:ydga_ecoli(display_long)|uniprotkb:ydgA(gene name)|psi-mi:ydgA(display_short)|uniprotkb:b1614(locus name)|uniprotkb:JW1606(locus name) psi-mi:ydga_ecoli(display_long)|uniprotkb:ydgA(gene name)|psi-mi:ydgA(display_short)|uniprotkb:b1614(locus name)|uniprotkb:JW1606(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213402 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416131.1|refseq:WP_001043339.1|dip:DIP-11709N|ensemblbacteria:AAC74686(transcript)|ensemblbacteria:b1614(gene)|ensemblbacteria:BAA15362(gene)|ensemblbacteria:BAA15362(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR010352(Protein of unknown function DUF945, bacterial) refseq:NP_416131.1|refseq:WP_001043339.1|dip:DIP-11709N|ensemblbacteria:AAC74686(transcript)|ensemblbacteria:b1614(gene)|ensemblbacteria:BAA15362(gene)|ensemblbacteria:BAA15362(transcript)|go:"GO:0005886"(plasma membrane)|go:"GO:0042802"(identical protein binding)|interpro:IPR010352(Protein of unknown function DUF945, bacterial) - - - complex-properties:The YdgA protein complex was shoown to be dimeric, molecular mass was estimated as 116 kDa.|figure legend:Figure 2A Supplemental Figure 2. taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:TvjP6Du0SKF0AnFT2P/Ox8+JE6I83333 rogid:TvjP6Du0SKF0AnFT2P/Ox8+JE6I83333 intact-crc:33863677C0D3AD94|rigid:weF8wVCm2slYCQ7W4YlWkeWczyY false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P02931 uniprotkb:P02931 intact:EBI-371336|ensemblbacteria:AAC74015|ensemblbacteria:BAA35675 intact:EBI-371336|ensemblbacteria:AAC74015|ensemblbacteria:BAA35675 psi-mi:ompf_ecoli(display_long)|uniprotkb:ompF(gene name)|psi-mi:ompF(display_short)|uniprotkb:cmlB(gene name synonym)|uniprotkb:tolF(gene name synonym)|uniprotkb:coa(gene name synonym)|uniprotkb:cry(gene name synonym)|uniprotkb:Porin OmpF(gene name synonym)|uniprotkb:Outer membrane protein 1A(gene name synonym)|uniprotkb:Outer membrane protein IA(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:b0929(locus name)|uniprotkb:JW0912(locus name)|uniprotkb:Outer membrane protein F(gene name synonym) psi-mi:ompf_ecoli(display_long)|uniprotkb:ompF(gene name)|psi-mi:ompF(display_short)|uniprotkb:cmlB(gene name synonym)|uniprotkb:tolF(gene name synonym)|uniprotkb:coa(gene name synonym)|uniprotkb:cry(gene name synonym)|uniprotkb:Porin OmpF(gene name synonym)|uniprotkb:Outer membrane protein 1A(gene name synonym)|uniprotkb:Outer membrane protein IA(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:b0929(locus name)|uniprotkb:JW0912(locus name)|uniprotkb:Outer membrane protein F(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1213408 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000977920.1|refseq:NP_415449.1|rcsb pdb:4D5U|rcsb pdb:4GCP|rcsb pdb:4GCQ|rcsb pdb:4GCS|rcsb pdb:4JFB|rcsb pdb:4LSE|rcsb pdb:4LSF|rcsb pdb:4LSH|rcsb pdb:4LSI|rcsb pdb:5NUO|rcsb pdb:5NUQ|rcsb pdb:3POX|rcsb pdb:5NUR|rcsb pdb:6WTZ|rcsb pdb:6ZHP|rcsb pdb:6ZHV|ensemblbacteria:AAC74015(transcript)|ensemblbacteria:b0929(gene)|ensemblbacteria:BAA35675(gene)|ensemblbacteria:BAA35675(transcript)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0005216"(ion channel activity)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0034702"(ion channel complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042912"(colicin transmembrane transporter activity)|go:"GO:0046930"(pore complex)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|interpro:IPR033900|rcsb pdb:1GFM|rcsb pdb:1GFN|rcsb pdb:1GFO|rcsb pdb:1GFP|rcsb pdb:1GFQ|rcsb pdb:1HXT|rcsb pdb:1HXU|rcsb pdb:1HXX|rcsb pdb:1MPF|rcsb pdb:1OPF|rcsb pdb:2OMF|rcsb pdb:2ZFG|rcsb pdb:2ZLD|rcsb pdb:3FYX|rcsb pdb:3HW9|rcsb pdb:3HWB|rcsb pdb:3K19|rcsb pdb:3K1B|rcsb pdb:3O0E|rcsb pdb:3POQ|rcsb pdb:3POU|rcsb pdb:1BT9|dip:DIP-10398N refseq:WP_000977920.1|refseq:NP_415449.1|rcsb pdb:4D5U|rcsb pdb:4GCP|rcsb pdb:4GCQ|rcsb pdb:4GCS|rcsb pdb:4JFB|rcsb pdb:4LSE|rcsb pdb:4LSF|rcsb pdb:4LSH|rcsb pdb:4LSI|rcsb pdb:5NUO|rcsb pdb:5NUQ|rcsb pdb:3POX|rcsb pdb:5NUR|rcsb pdb:6WTZ|rcsb pdb:6ZHP|rcsb pdb:6ZHV|ensemblbacteria:AAC74015(transcript)|ensemblbacteria:b0929(gene)|ensemblbacteria:BAA35675(gene)|ensemblbacteria:BAA35675(transcript)|go:"GO:0001530"(lipopolysaccharide binding)|go:"GO:0005216"(ion channel activity)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0034702"(ion channel complex)|go:"GO:0042802"(identical protein binding)|go:"GO:0042912"(colicin transmembrane transporter activity)|go:"GO:0046930"(pore complex)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:0070207"(protein homotrimerization)|go:"GO:0097718"(disordered domain specific binding)|interpro:IPR001702(Porin, Gram-negative type)|interpro:IPR001897(Porin, bacterial type)|interpro:IPR013793(Porin, general diffusion Gram-negative, conserved site)|interpro:IPR023614|interpro:IPR033900|rcsb pdb:1GFM|rcsb pdb:1GFN|rcsb pdb:1GFO|rcsb pdb:1GFP|rcsb pdb:1GFQ|rcsb pdb:1HXT|rcsb pdb:1HXU|rcsb pdb:1HXX|rcsb pdb:1MPF|rcsb pdb:1OPF|rcsb pdb:2OMF|rcsb pdb:2ZFG|rcsb pdb:2ZLD|rcsb pdb:3FYX|rcsb pdb:3HW9|rcsb pdb:3HWB|rcsb pdb:3K19|rcsb pdb:3K1B|rcsb pdb:3O0E|rcsb pdb:3POQ|rcsb pdb:3POU|rcsb pdb:1BT9|dip:DIP-10398N - crc64:3F0974D96DB65464 crc64:3F0974D96DB65464 complex-properties:The OmpF protein complex was trimeric, molecular mass was estimated as 37 kDa.|figure legend:Figure 2B|caution:"The authors note that \"Other OmpF forms detected in the SDS gel are a result of smearing in the BN-gel or incomplete denaturation in the SDS gel.\""|caution:"The participant EBI-371336(P02931) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:XBV4vmVyGY7JXC71Uk2YGec4H+c83333 rogid:XBV4vmVyGY7JXC71Uk2YGec4H+c83333 intact-crc:8B4007417B0ECF9F|rigid:6r5Ktcv+B8dslUx3y036Wrny0mk false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P02943 uniprotkb:P02943 intact:EBI-371309|uniprotkb:Q2M6R8|ensemblbacteria:AAC77006|ensemblbacteria:BAE78038 intact:EBI-371309|uniprotkb:Q2M6R8|ensemblbacteria:AAC77006|ensemblbacteria:BAE78038 psi-mi:lamb_ecoli(display_long)|uniprotkb:lamB(gene name)|psi-mi:lamB(display_short)|uniprotkb:malB(gene name synonym)|uniprotkb:Maltose-inducible porin(gene name synonym)|uniprotkb:b4036(locus name)|uniprotkb:JW3996(locus name)|uniprotkb:Maltose outer membrane channel(gene name synonym)|uniprotkb:Phage lambda receptor protein(gene name synonym) psi-mi:lamb_ecoli(display_long)|uniprotkb:lamB(gene name)|psi-mi:lamB(display_short)|uniprotkb:malB(gene name synonym)|uniprotkb:Maltose-inducible porin(gene name synonym)|uniprotkb:b4036(locus name)|uniprotkb:JW3996(locus name)|uniprotkb:Maltose outer membrane channel(gene name synonym)|uniprotkb:Phage lambda receptor protein(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214127 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000973663.1|refseq:NP_418460.1|interpro:IPR036998|rcsb pdb:1AF6|rcsb pdb:1MAL|rcsb pdb:1MPM|rcsb pdb:1MPN|rcsb pdb:1MPO|rcsb pdb:1MPQ|interpro:IPR023738|ensemblbacteria:AAC77006(transcript)|ensemblbacteria:b4036(gene)|ensemblbacteria:BAE78038(gene)|ensemblbacteria:BAE78038(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015144"(carbohydrate transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015481"(maltose transporting porin activity)|go:"GO:0015774"(polysaccharide transport)|go:"GO:0042956"(maltodextrin transport)|go:"GO:0042958"(maltodextrin transmembrane transporter activity)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046930"(pore complex)|interpro:IPR003192(Porin, LamB type)|dip:DIP-10082N refseq:WP_000973663.1|refseq:NP_418460.1|interpro:IPR036998|rcsb pdb:1AF6|rcsb pdb:1MAL|rcsb pdb:1MPM|rcsb pdb:1MPN|rcsb pdb:1MPO|rcsb pdb:1MPQ|interpro:IPR023738|ensemblbacteria:AAC77006(transcript)|ensemblbacteria:b4036(gene)|ensemblbacteria:BAE78038(gene)|ensemblbacteria:BAE78038(transcript)|go:"GO:0001618"(virus receptor activity)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015144"(carbohydrate transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015481"(maltose transporting porin activity)|go:"GO:0015774"(polysaccharide transport)|go:"GO:0042956"(maltodextrin transport)|go:"GO:0042958"(maltodextrin transmembrane transporter activity)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046930"(pore complex)|interpro:IPR003192(Porin, LamB type)|dip:DIP-10082N - - - complex-properties:The LamB protein was trimeric , molecular mass not quoted.|figure legend:Figure 2B|caution:"The participant EBI-371309(P02943) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:FLEchyy8ES9TMlWNsIJ7nhVmH7083333 rogid:FLEchyy8ES9TMlWNsIJ7nhVmH7083333 intact-crc:E3460E04098B6ADD|rigid:IkVivjod2FeHJe+acOBtJA9Apuw false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P02930 uniprotkb:P02930 intact:EBI-875614|uniprotkb:Q2M9G5|ensemblbacteria:AAC76071|ensemblbacteria:BAE77091 intact:EBI-875614|uniprotkb:Q2M9G5|ensemblbacteria:AAC76071|ensemblbacteria:BAE77091 psi-mi:tolc_ecoli(display_long)|uniprotkb:tolC(gene name)|psi-mi:tolC(display_short)|uniprotkb:mtcB(gene name synonym)|uniprotkb:mukA(gene name synonym)|uniprotkb:refI(gene name synonym)|uniprotkb:Multidrug efflux pump subunit TolC(gene name synonym)|uniprotkb:Outer membrane factor TolC(gene name synonym)|uniprotkb:colE1-i(gene name synonym)|uniprotkb:toc(gene name synonym)|uniprotkb:weeA(gene name synonym)|uniprotkb:JW5503(locus name)|uniprotkb:b3035(locus name) psi-mi:tolc_ecoli(display_long)|uniprotkb:tolC(gene name)|psi-mi:tolC(display_short)|uniprotkb:mtcB(gene name synonym)|uniprotkb:mukA(gene name synonym)|uniprotkb:refI(gene name synonym)|uniprotkb:Multidrug efflux pump subunit TolC(gene name synonym)|uniprotkb:Outer membrane factor TolC(gene name synonym)|uniprotkb:colE1-i(gene name synonym)|uniprotkb:toc(gene name synonym)|uniprotkb:weeA(gene name synonym)|uniprotkb:JW5503(locus name)|uniprotkb:b3035(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214138 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_417507.2|refseq:WP_000735278.1|dip:DIP-11007N|ensemblbacteria:AAC76071(transcript)|ensemblbacteria:b3035(gene)|ensemblbacteria:BAE77091(gene)|ensemblbacteria:BAE77091(transcript)|go:"GO:0005216"(ion channel activity)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042930"(enterobactin transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046677"(response to antibiotic)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:1990196"(MacAB-TolC complex)|go:"GO:1990281"(efflux pump complex)|interpro:IPR003423(Outer membrane efflux protein)|interpro:IPR010130(Type I secretion outer membrane protein, TolC)|rcsb pdb:1EK9|rcsb pdb:1TQQ|rcsb pdb:2VDD|rcsb pdb:2VDE|rcsb pdb:2WMZ|rcsb pdb:2XMN|rcsb pdb:5NG5|rcsb pdb:5NIK|rcsb pdb:5NIL|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:6WXH|rcsb pdb:6WXI refseq:NP_417507.2|refseq:WP_000735278.1|dip:DIP-11007N|ensemblbacteria:AAC76071(transcript)|ensemblbacteria:b3035(gene)|ensemblbacteria:BAE77091(gene)|ensemblbacteria:BAE77091(transcript)|go:"GO:0005216"(ion channel activity)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009636"(response to toxic substance)|go:"GO:0014070"(response to organic cyclic compound)|go:"GO:0015125"(bile acid transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0015562"(efflux transmembrane transporter activity)|go:"GO:0015721"(bile acid and bile salt transport)|go:"GO:0016021"(integral component of membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0034220"(ion transmembrane transport)|go:"GO:0042493"|go:"GO:0042802"(identical protein binding)|go:"GO:0042930"(enterobactin transport)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046677"(response to antibiotic)|go:"GO:0047485"(protein N-terminus binding)|go:"GO:1990196"(MacAB-TolC complex)|go:"GO:1990281"(efflux pump complex)|interpro:IPR003423(Outer membrane efflux protein)|interpro:IPR010130(Type I secretion outer membrane protein, TolC)|rcsb pdb:1EK9|rcsb pdb:1TQQ|rcsb pdb:2VDD|rcsb pdb:2VDE|rcsb pdb:2WMZ|rcsb pdb:2XMN|rcsb pdb:5NG5|rcsb pdb:5NIK|rcsb pdb:5NIL|rcsb pdb:5O66|rcsb pdb:5V5S|rcsb pdb:6WXH|rcsb pdb:6WXI - - - complex-properties:TolC was trimeric, molcular mass of he complex not specified.|figure legend:Figure 2B|caution:"The participant EBI-875614(P02930) was duplicated. It is posssible that originally this interaction did contain more participants pointing to different Trembl proteins which have been merged to a single swissprot protein later." taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:67LQDsYiAt6tDwigzlhM3Pp5+JA83333 rogid:67LQDsYiAt6tDwigzlhM3Pp5+JA83333 intact-crc:6B1A274C85584E14|rigid:jYYvtdyJteICiGPMzsrlAL9DGbc false - - - 0 psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0A940 uniprotkb:P0A903 intact:EBI-907371|uniprotkb:P39170|uniprotkb:P39181|uniprotkb:P77465|uniprotkb:Q548B8|uniprotkb:Q8KR94|uniprotkb:Q9R2E3|ensemblbacteria:AAC73288|ensemblbacteria:BAA77852 intact:EBI-1129043|uniprotkb:P21167|uniprotkb:P76564|ensemblbacteria:AAC75530|ensemblbacteria:BAA16354 psi-mi:bama_ecoli(display_long)|uniprotkb:bamA(gene name)|psi-mi:bamA(display_short)|uniprotkb:Omp85(gene name synonym)|uniprotkb:yaeT(gene name synonym)|uniprotkb:yzzN(gene name synonym)|uniprotkb:yzzY(gene name synonym)|uniprotkb:JW0172(locus name)|uniprotkb:b0177(locus name) psi-mi:bamc_ecoli(display_long)|uniprotkb:bamC(gene name)|psi-mi:bamC(display_short)|uniprotkb:dapX(gene name synonym)|uniprotkb:nlpB(gene name synonym)|uniprotkb:JW2462(locus name)|uniprotkb:b2477(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214184 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414719.1|refseq:WP_001240896.1|dip:DIP-36019N|ensemblbacteria:AAC73288(transcript)|ensemblbacteria:b0177(gene)|ensemblbacteria:BAA77852(gene)|ensemblbacteria:BAA77852(transcript)|go:"GO:0007155"(cell adhesion)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR000184("Bacterial surface antigen (D15)")|interpro:IPR010827(Surface antigen variable number)|interpro:IPR023707|interpro:IPR034746|interpro:IPR039910|rcsb pdb:2QCZ|rcsb pdb:2QDF|rcsb pdb:2V9H|rcsb pdb:3EFC|rcsb pdb:3OG5|rcsb pdb:3Q6B|rcsb pdb:4C4V|rcsb pdb:4N75|rcsb pdb:4PK1|rcsb pdb:4XGA|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6T1W|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI refseq:NP_416972.4|refseq:WP_001297320.1|ensemblbacteria:AAC75530(transcript)|ensemblbacteria:b2477(gene)|ensemblbacteria:BAA16354(gene)|ensemblbacteria:BAA16354(transcript)|go:"GO:0009986"(cell surface)|go:"GO:0042802"(identical protein binding)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR010653(NlpBDapX lipoprotein)|interpro:IPR014524(Lipoprotein, NlpB type)|interpro:IPR042268|rcsb pdb:2LAE|rcsb pdb:2LAF|rcsb pdb:2YH5|rcsb pdb:2YH6|rcsb pdb:3SNS|rcsb pdb:3TGO|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI|dip:DIP-39898N - - - complex-properties:"YaeT (85 kDa), NlpB (34 kDa), and YfiO (26 kDa), along with a fourth protein of 40 kDa, in a complex, corresponding to exactly 178 kDa was identified."|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:ZFll+Xb5D5zd+ml/HoFK73elm/M83333 rogid:uKNUHaYcGu0iXXBHURmL+BBTe7k83333 intact-crc:7FAE7FD44F4D9138|rigid:goyWlUJwjbb2Hq5sXoPTAbYRfk4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0A940 uniprotkb:P0AC04 intact:EBI-907371|uniprotkb:P39170|uniprotkb:P39181|uniprotkb:P77465|uniprotkb:Q548B8|uniprotkb:Q8KR94|uniprotkb:Q9R2E3|ensemblbacteria:AAC73288|ensemblbacteria:BAA77852 intact:EBI-1128071|uniprotkb:P77146|uniprotkb:Q47344|ensemblbacteria:AAG57708|ensemblbacteria:BAB36881 psi-mi:bama_ecoli(display_long)|uniprotkb:bamA(gene name)|psi-mi:bamA(display_short)|uniprotkb:Omp85(gene name synonym)|uniprotkb:yaeT(gene name synonym)|uniprotkb:yzzN(gene name synonym)|uniprotkb:yzzY(gene name synonym)|uniprotkb:JW0172(locus name)|uniprotkb:b0177(locus name) psi-mi:bamd_eco57(display_long)|uniprotkb:bamD(gene name)|psi-mi:bamD(display_short)|uniprotkb:yfiO(gene name synonym)|uniprotkb:ECs3458(locus name)|uniprotkb:Z3889(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83334(eco57)|taxid:83334("Escherichia coli O157:H7") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214184 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_414719.1|refseq:WP_001240896.1|dip:DIP-36019N|ensemblbacteria:AAC73288(transcript)|ensemblbacteria:b0177(gene)|ensemblbacteria:BAA77852(gene)|ensemblbacteria:BAA77852(transcript)|go:"GO:0007155"(cell adhesion)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane)|go:"GO:1990063"(Bam protein complex)|interpro:IPR000184("Bacterial surface antigen (D15)")|interpro:IPR010827(Surface antigen variable number)|interpro:IPR023707|interpro:IPR034746|interpro:IPR039910|rcsb pdb:2QCZ|rcsb pdb:2QDF|rcsb pdb:2V9H|rcsb pdb:3EFC|rcsb pdb:3OG5|rcsb pdb:3Q6B|rcsb pdb:4C4V|rcsb pdb:4N75|rcsb pdb:4PK1|rcsb pdb:4XGA|rcsb pdb:5AYW|rcsb pdb:5D0O|rcsb pdb:5D0Q|rcsb pdb:5EKQ|rcsb pdb:5LJO|rcsb pdb:6LYQ|rcsb pdb:6LYR|rcsb pdb:6LYS|rcsb pdb:6LYU|rcsb pdb:6SN9|rcsb pdb:6SOB|rcsb pdb:6SOJ|rcsb pdb:6T1W|rcsb pdb:6V05|rcsb pdb:7BNQ|rcsb pdb:7NBX|rcsb pdb:7NCS|rcsb pdb:7ND0|rcsb pdb:7NRI interpro:IPR017689(Outer membrane assembly lipoprotein YfiO)|interpro:IPR011990(Tetratricopeptide-like helical)|refseq:NP_311485.1|interpro:IPR039565|refseq:WP_000197686.1|ensemblbacteria:AAG57708(transcript)|ensemblbacteria:BAB36881(transcript)|ensemblbacteria:ECs_3458(gene)|ensemblbacteria:Z3889(gene)|go:"GO:0009279"(cell outer membrane)|go:"GO:0043165"(Gram-negative-bacterium-type cell outer membrane assembly)|go:"GO:0051205"(protein insertion into membrane) - - - complex-properties:"YaeT (85 kDa), NlpB (34 kDa), and YfiO (26 kDa), along with a fourth protein of 40 kDa, in a complex, corresponding to exactly 178 kDa was identified."|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:ZFll+Xb5D5zd+ml/HoFK73elm/M83333 rogid:2Hsq+7DzvFcudrc+kYWfz/s/OR483334 intact-crc:7FAE7FD44F4D9138|rigid:goyWlUJwjbb2Hq5sXoPTAbYRfk4 false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P0A910 uniprotkb:P0A910 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 intact:EBI-371347|uniprotkb:P02934|ensemblbacteria:AAC74043|ensemblbacteria:BAA35715 psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:ompa_ecoli(display_long)|uniprotkb:ompA(gene name)|psi-mi:ompA(display_short)|uniprotkb:tolG(gene name synonym)|uniprotkb:tut(gene name synonym)|uniprotkb:con(gene name synonym)|uniprotkb:Outer membrane protein II*(gene name synonym)|uniprotkb:b0957(locus name)|uniprotkb:JW0940(locus name)|uniprotkb:Outer membrane porin A(gene name synonym)|uniprotkb:Outer membrane protein 3A(gene name synonym)|uniprotkb:Outer membrane protein B(gene name synonym)|uniprotkb:Outer membrane protein d(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214191 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N refseq:WP_000750416.1|refseq:NP_415477.1|ensemblbacteria:AAC74043(transcript)|ensemblbacteria:b0957(gene)|ensemblbacteria:BAA35715(gene)|ensemblbacteria:BAA35715(transcript)|go:"GO:0000746"(conjugation)|go:"GO:0006811"(ion transport)|go:"GO:0006974"(cellular response to DNA damage stimulus)|go:"GO:0009279"(cell outer membrane)|go:"GO:0009597"(detection of virus)|go:"GO:0015075"(ion transmembrane transporter activity)|go:"GO:0015288"(porin activity)|go:"GO:0016020"(membrane)|go:"GO:0016021"(integral component of membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0042802"(identical protein binding)|go:"GO:0045203"(integral component of cell outer membrane)|go:"GO:0046718"(viral entry into host cell)|go:"GO:0046930"(pore complex)|interpro:IPR000498(Outer membrane protein, OmpA-like, transmembrane region)|interpro:IPR002368(Outer membrane protein, OmpA)|interpro:IPR006664(Outer membrane protein, bacterial)|interpro:IPR006690(Outer membrane protein, OmpA-like, conserved site)|interpro:IPR011250(Outer membrane protein, beta-barrel)|interpro:IPR036737|rcsb pdb:1BXW|rcsb pdb:1G90|rcsb pdb:1QJP|rcsb pdb:2GE4|rcsb pdb:2JMM|rcsb pdb:2MQE|rcsb pdb:3JBU|rcsb pdb:5M2Q|rcsb pdb:6ITC|rcsb pdb:6LYR|interpro:IPR006665(Outer membrane protein, OmpA/MotB, C-terminal)|mint:P0A910|dip:DIP-31879N - - - complex-properties:OmpA was dimeric with estimated molecular mass 74 kDa.|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 rogid:CxKbAqrjV2AUC+f7xNFm73aceRs83333 intact-crc:163F56C56830DC5A|rigid:8+oUaG9mDdPAeFzxoyYB9Mxg53g false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P10384 uniprotkb:P10384 intact:EBI-1214197|uniprotkb:P77697|ensemblbacteria:AAC75404|ensemblbacteria:BAA16205 intact:EBI-1214197|uniprotkb:P77697|ensemblbacteria:AAC75404|ensemblbacteria:BAA16205 psi-mi:fadl_ecoli(display_long)|uniprotkb:Outer membrane FadL protein(gene name synonym)|uniprotkb:fadL(gene name)|psi-mi:fadL(display_short)|uniprotkb:ttr(gene name synonym)|uniprotkb:b2344(locus name)|uniprotkb:JW2341(locus name)|uniprotkb:Outer membrane flp protein(gene name synonym) psi-mi:fadl_ecoli(display_long)|uniprotkb:Outer membrane FadL protein(gene name synonym)|uniprotkb:fadL(gene name)|psi-mi:fadL(display_short)|uniprotkb:ttr(gene name synonym)|uniprotkb:b2344(locus name)|uniprotkb:JW2341(locus name)|uniprotkb:Outer membrane flp protein(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214206 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_416846.2|interpro:IPR005017(Membrane protein involved in aromatic hydrocarbon degradation)|rcsb pdb:1T16|rcsb pdb:1T1L|rcsb pdb:2R4L|rcsb pdb:2R4N|rcsb pdb:2R89|rcsb pdb:2R8A|rcsb pdb:3DWN|rcsb pdb:3PF1|rcsb pdb:3PGR|rcsb pdb:3PGS|rcsb pdb:3PGU|rcsb pdb:2R4O|rcsb pdb:2R4P|rcsb pdb:2R88|refseq:WP_001295701.1|ensemblbacteria:AAC75404(transcript)|ensemblbacteria:b2344(gene)|ensemblbacteria:BAA16205(gene)|ensemblbacteria:BAA16205(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015483"(long-chain fatty acid transporting porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022834"(ligand-gated channel activity) refseq:NP_416846.2|interpro:IPR005017(Membrane protein involved in aromatic hydrocarbon degradation)|rcsb pdb:1T16|rcsb pdb:1T1L|rcsb pdb:2R4L|rcsb pdb:2R4N|rcsb pdb:2R89|rcsb pdb:2R8A|rcsb pdb:3DWN|rcsb pdb:3PF1|rcsb pdb:3PGR|rcsb pdb:3PGS|rcsb pdb:3PGU|rcsb pdb:2R4O|rcsb pdb:2R4P|rcsb pdb:2R88|refseq:WP_001295701.1|ensemblbacteria:AAC75404(transcript)|ensemblbacteria:b2344(gene)|ensemblbacteria:BAA16205(gene)|ensemblbacteria:BAA16205(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0015483"(long-chain fatty acid transporting porin activity)|go:"GO:0016021"(integral component of membrane)|go:"GO:0022834"(ligand-gated channel activity) - - - complex-properties:FadL was dimeric with estimated molecular mass 77 kDa.|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:GRftipQQnd6q54kKZssQLmKtpd883333 rogid:GRftipQQnd6q54kKZssQLmKtpd883333 intact-crc:2B285B64CA6C2C24|rigid:VQAg6tgIIVLi65JePc6eZsCM8VE false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P37194 uniprotkb:P37194 intact:EBI-907245|uniprotkb:Q2M7G8|uniprotkb:P76709|ensemblbacteria:AAC76531|ensemblbacteria:BAE77788 intact:EBI-907245|uniprotkb:Q2M7G8|uniprotkb:P76709|ensemblbacteria:AAC76531|ensemblbacteria:BAE77788 psi-mi:slp_ecoli(display_long)|uniprotkb:slp(gene name)|psi-mi:slp(display_short)|uniprotkb:b3506(locus name)|uniprotkb:JW3474(locus name) psi-mi:slp_ecoli(display_long)|uniprotkb:slp(gene name)|psi-mi:slp(display_short)|uniprotkb:b3506(locus name)|uniprotkb:JW3474(locus name) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214222 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) interpro:IPR004658(Outer membrane lipoprotein Slp)|refseq:NP_417963.4|refseq:WP_001350553.1|ensemblbacteria:AAC76531(transcript)|ensemblbacteria:b3506(gene)|ensemblbacteria:BAE77788(gene)|ensemblbacteria:BAE77788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0042802"(identical protein binding) interpro:IPR004658(Outer membrane lipoprotein Slp)|refseq:NP_417963.4|refseq:WP_001350553.1|ensemblbacteria:AAC76531(transcript)|ensemblbacteria:b3506(gene)|ensemblbacteria:BAE77788(gene)|ensemblbacteria:BAE77788(transcript)|go:"GO:0009279"(cell outer membrane)|go:"GO:0019867"(outer membrane)|go:"GO:0042802"(identical protein binding) - - - complex-properties:Slp as appeared as a smeared band in the SDS gel indicating that it forms higher order oligomers.|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:crQUuQAx+2S35HrjXjpyKwB4y9Q83333 rogid:crQUuQAx+2S35HrjXjpyKwB4y9Q83333 intact-crc:52C476A3451491A2|rigid:f/2bYjOypnykF9UPe+qy2IiKpnI false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry) uniprotkb:P69776 uniprotkb:P69776 intact:EBI-909750|ensemblbacteria:AAC74747|ensemblbacteria:BAA16044|uniprotkb:P02937|uniprotkb:Q53272 intact:EBI-909750|ensemblbacteria:AAC74747|ensemblbacteria:BAA16044|uniprotkb:P02937|uniprotkb:Q53272 psi-mi:lpp_ecoli(display_long)|uniprotkb:lpp(gene name)|psi-mi:lpp(display_short)|uniprotkb:mlpA(gene name synonym)|uniprotkb:mulI(gene name synonym)|uniprotkb:b1677(locus name)|uniprotkb:JW1667(locus name)|uniprotkb:Braun lipoprotein(gene name synonym)|uniprotkb:Murein-lipoprotein(gene name synonym) psi-mi:lpp_ecoli(display_long)|uniprotkb:lpp(gene name)|psi-mi:lpp(display_short)|uniprotkb:mlpA(gene name synonym)|uniprotkb:mulI(gene name synonym)|uniprotkb:b1677(locus name)|uniprotkb:JW1667(locus name)|uniprotkb:Braun lipoprotein(gene name synonym)|uniprotkb:Murein-lipoprotein(gene name synonym) psi-mi:"MI:0276"(blue native page) Stenberg et al. (2005) pubmed:16079137 taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1214251 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) rcsb pdb:1KFN|rcsb pdb:1MLP|rcsb pdb:1T8Z|rcsb pdb:2GUS|rcsb pdb:2GUV|ensemblbacteria:AAC74747(transcript)|ensemblbacteria:b1677(gene)|ensemblbacteria:BAA16044(gene)|ensemblbacteria:BAA16044(transcript)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016020"(membrane)|go:"GO:0030258"(lipid modification)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0031230"(intrinsic component of cell outer membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042834"(peptidoglycan binding)|go:"GO:0043580"(periplasmic space organization)|go:"GO:0045203"(integral component of cell outer membrane)|interpro:IPR006817(LPP motif)|interpro:IPR016367(Murein-lipoprotein)|rcsb pdb:1EQ7|rcsb pdb:1JCC|rcsb pdb:1JCD|rcsb pdb:1KFM|refseq:NP_416192.1|refseq:WP_000648420.1|dip:DIP-35674N rcsb pdb:1KFN|rcsb pdb:1MLP|rcsb pdb:1T8Z|rcsb pdb:2GUS|rcsb pdb:2GUV|ensemblbacteria:AAC74747(transcript)|ensemblbacteria:b1677(gene)|ensemblbacteria:BAA16044(gene)|ensemblbacteria:BAA16044(transcript)|go:"GO:0005576"(extracellular region)|go:"GO:0005618"(cell wall)|go:"GO:0008289"(lipid binding)|go:"GO:0009279"(cell outer membrane)|go:"GO:0016020"(membrane)|go:"GO:0030258"(lipid modification)|go:"GO:0030288"(outer membrane-bounded periplasmic space)|go:"GO:0031230"(intrinsic component of cell outer membrane)|go:"GO:0042802"(identical protein binding)|go:"GO:0042834"(peptidoglycan binding)|go:"GO:0043580"(periplasmic space organization)|go:"GO:0045203"(integral component of cell outer membrane)|interpro:IPR006817(LPP motif)|interpro:IPR016367(Murein-lipoprotein)|rcsb pdb:1EQ7|rcsb pdb:1JCC|rcsb pdb:1JCD|rcsb pdb:1KFM|refseq:NP_416192.1|refseq:WP_000648420.1|dip:DIP-35674N - - - complex-properties:"The 8-kDa MulI in a complex with an estimated molecular mass of 87 kDa (Fig. 2B). Other less abundant, higher molecular mass complexes were also detected."|figure legend:Figure 2B taxid:83333(ecoli)|taxid:83333("Escherichia coli (strain K12)") - 2007/03/12 2014/10/16 rogid:MSU6I8nZGpwfkax0HPNB+PLtHqw83333 rogid:MSU6I8nZGpwfkax0HPNB+PLtHqw83333 intact-crc:4F3E845E0514B137|rigid:2PYVU8MezPejgAqVHz9sYW3BgqA false - - - - psi-mi:"MI:0427"(Identification by mass spectrometry) psi-mi:"MI:0427"(Identification by mass spectrometry)