#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:P32591 uniprotkb:P53330 intact:EBI-18622|ensemblfungi:YJL176C|uniprotkb:D6VW13 intact:EBI-23637|uniprotkb:D6VV52|ensemblfungi:YGR275W psi-mi:swi3_yeast(display_long)|uniprotkb:SWI3(gene name)|psi-mi:SWI3(display_short)|uniprotkb:TYE2(gene name synonym)|uniprotkb:J0495(orf name)|uniprotkb:YJL176C(locus name)|uniprotkb:Transcription regulatory protein SWI3(gene name synonym)|uniprotkb:Transcription factor TYE2(gene name synonym) psi-mi:rt102_yeast(display_long)|uniprotkb:RTT102(gene name)|psi-mi:RTT102(display_short)|uniprotkb:G9378(orf name)|uniprotkb:YGR275W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189734 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJL176C(gene)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR032451|interpro:IPR036388|rcsb pdb:2FQ3|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YJL176C_mRNA(transcript)|refseq:NP_012359.1|sgd:S000003712|dip:DIP-2471N|mint:P32591 refseq:NP_011791.4|sgd:S000003507|dip:DIP-3864N|mint:P53330|ensemblfungi:YGR275W(gene)|ensemblfungi:YGR275W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007059"(chromosome segregation)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|interpro:IPR018304 - crc64:DBA2E2022F15F9A6 - figure legend:3B|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:nS1Z019Zv1HTDCHajHw2lvqLt14559292 rogid:/DVamY55v9Ty3kmHzpK9s+Wakpg559292 intact-crc:4BE0AABDC2A2E5EF|rigid:Ki7FNZCbFUHT0Qf8MA91/wq3vOE false - calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32591 uniprotkb:P18888 intact:EBI-18622|ensemblfungi:YJL176C|uniprotkb:D6VW13 intact:EBI-17550|uniprotkb:D3DKU3|ensemblfungi:YHL025W psi-mi:swi3_yeast(display_long)|uniprotkb:SWI3(gene name)|psi-mi:SWI3(display_short)|uniprotkb:TYE2(gene name synonym)|uniprotkb:J0495(orf name)|uniprotkb:YJL176C(locus name)|uniprotkb:Transcription regulatory protein SWI3(gene name synonym)|uniprotkb:Transcription factor TYE2(gene name synonym) psi-mi:snf6_yeast(display_long)|uniprotkb:SNF6(gene name)|psi-mi:SNF6(display_short)|uniprotkb:YHL025W(locus name)|uniprotkb:SWI/SNF complex component SNF6(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189740 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) ensemblfungi:YJL176C(gene)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR032451|interpro:IPR036388|rcsb pdb:2FQ3|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YJL176C_mRNA(transcript)|refseq:NP_012359.1|sgd:S000003712|dip:DIP-2471N|mint:P32591 go:"GO:0005829"(cytosol)|refseq:NP_011838.1|sgd:S000001017|go:"GO:0006338"(chromatin remodeling)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|go:"GO:0006289"(nucleotide-excision repair)|ensemblfungi:YHL025W(gene)|ensemblfungi:YHL025W_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|dip:DIP-1226N|mint:P18888 - crc64:DBA2E2022F15F9A6 crc64:ED9EA9F313F9079F figure legend:3B|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:nS1Z019Zv1HTDCHajHw2lvqLt14559292 rogid:OjRVJEikcmyHBr/qDYYwQ1TgP1c559292 intact-crc:097040DB4F1FDC69|rigid:U/BOZJZWMFwYoND2EN4Ms3wgLac false - calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:P32597 uniprotkb:P53330 intact:EBI-18410|uniprotkb:Q45U09|uniprotkb:D6VVG1|ensemblfungi:YIL126W intact:EBI-23637|uniprotkb:D6VV52|ensemblfungi:YGR275W psi-mi:sth1_yeast(display_long)|uniprotkb:STH1(gene name)|psi-mi:STH1(display_short)|uniprotkb:NPS1(gene name synonym)|uniprotkb:ATP-dependent helicase STH1(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein STH1(gene name synonym)|uniprotkb:SNF2 homolog(gene name synonym)|uniprotkb:YIL126W(locus name) psi-mi:rt102_yeast(display_long)|uniprotkb:RTT102(gene name)|psi-mi:RTT102(display_short)|uniprotkb:G9378(orf name)|uniprotkb:YGR275W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189754 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_012140.1|sgd:S000001388|ensemblfungi:YIL126W(gene)|ensemblfungi:YIL126W_mRNA(transcript)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003677"(DNA binding)|go:"GO:0003678"(DNA helicase activity)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006284"(base-excision repair)|go:"GO:0006302"(double-strand break repair)|go:"GO:0007059"(chromosome segregation)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0015616"(DNA translocase activity)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0031055"(chromatin remodeling at centromere)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0051321"(meiotic cell cycle)|go:"GO:0061587"(transfer RNA gene-mediated silencing)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:0140603"(obsolete ATP hydrolysis activity)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007010"(cytoskeleton organization)|interpro:IPR038718|rcsb pdb:6K15|rcsb pdb:6KMB|rcsb pdb:6KMJ|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6LQZ|rcsb pdb:6MR4|rcsb pdb:6TDA|rcsb pdb:6UY1|rcsb pdb:6V8O|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|reactome:R-SCE-3214858|dip:DIP-5889N|mint:P32597 refseq:NP_011791.4|sgd:S000003507|dip:DIP-3864N|mint:P53330|ensemblfungi:YGR275W(gene)|ensemblfungi:YGR275W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007059"(chromosome segregation)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|interpro:IPR018304 - crc64:269A91BD853C20D0 - figure legend:3B|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:uNQ0+Tk78keY/nPc3+9Hk3GVxmo559292 rogid:/DVamY55v9Ty3kmHzpK9s+Wakpg559292 intact-crc:4217CFEA24232B42|rigid:guzazlOuv6+HDxqGPOOazt43eis false - calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0705"(anti tag western blot) psi-mi:"MI:0705"(anti tag western blot) uniprotkb:Q02336 uniprotkb:Q03330 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-7458|uniprotkb:Q6B165|uniprotkb:D6VV32|ensemblfungi:YGR252W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:gcn5_yeast(display_long)|uniprotkb:YGR252W(locus name)|uniprotkb:GCN5(gene name)|psi-mi:GCN5(display_short)|uniprotkb:ADA4(gene name synonym)|uniprotkb:SWI9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011768.1|sgd:S000003484|mint:Q03330|dip:DIP-710N|ensemblfungi:YGR252W(gene)|ensemblfungi:YGR252W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0010484"(H3 histone acetyltransferase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0140068"(histone crotonyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR001487(Bromodomain)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037800|rcsb pdb:1E6I|rcsb pdb:1YGH|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880|reactome:R-SCE-9018519 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:3200730DDC7EF70D figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y8SHidiW4dJo0oxEDksur8MC/L0559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12060 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-8287|uniprotkb:O00039|uniprotkb:Q02813|uniprotkb:D6W3B7|ensemblfungi:YPL254W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:hfi1_yeast(display_long)|uniprotkb:YPL254W(locus name)|uniprotkb:HFI1(gene name)|psi-mi:HFI1(display_short)|uniprotkb:ADA1(gene name synonym)|uniprotkb:SUP110(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015069.1|sgd:S000006175|mint:Q12060|dip:DIP-955N|ensemblfungi:YPL254W(gene)|ensemblfungi:YPL254W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR024738|rcsb pdb:6T9I|rcsb pdb:6T9K go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:B3ACF3C6101AB541 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7re3NqHw5NdglxE67EYjLam7KxY559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P32494 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-2192|uniprotkb:D6VSF8|ensemblfungi:YDR176W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ngg1_yeast(display_long)|uniprotkb:NGG1(gene name)|psi-mi:NGG1(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:YDR176W(locus name)|uniprotkb:YD9395.09(orf name)|uniprotkb:SWI7(gene name synonym)|uniprotkb:Transcriptional adapter 3(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002583|refseq:NP_010461.3|dip:DIP-774N|mint:P32494|ensemblfungi:YDR176W(gene)|ensemblfungi:YDR176W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR019340|reactome:R-SCE-5689880 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:489016BFD1C095D4 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:YZn7437qjQ0OVO7bqlpx9wGSd0k559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03067 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-34550|uniprotkb:D6W3W7|ensemblfungi:YPL047W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf11_yeast(display_long)|uniprotkb:SGF11(gene name)|psi-mi:SGF11(display_short)|uniprotkb:11 kDa SAGA-associated factor(gene name synonym)|uniprotkb:YPL047W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015278.1|sgd:S000005968|mint:Q03067|dip:DIP-39582N|ensemblfungi:YPL047W(gene)|ensemblfungi:YPL047W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0071819"(DUBm complex)|interpro:IPR013246(Sgf11, transcriptional regulation)|interpro:IPR041216|rcsb pdb:2LO2|rcsb pdb:3KIK|rcsb pdb:3KJL|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:31CBBD4CAA18F3F9 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:D1rjYNXMK75P1lJxeQ8oBjl0n+w559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P25554 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-21678|uniprotkb:P87008|uniprotkb:D6VR02|ensemblfungi:YCL010C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf29_yeast(display_long)|uniprotkb:YCL010C(locus name)|uniprotkb:YCL10C(orf name)|uniprotkb:SGF29(gene name)|psi-mi:SGF29(display_short)|uniprotkb:29 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 29 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009917.1|sgd:S000000516|mint:P25554|dip:DIP-4871N|interpro:IPR002999(Tudor)|interpro:IPR010750(Protein of unknown function DUF1325)|interpro:IPR037802|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3MP8|ensemblfungi:YCL010C(gene)|ensemblfungi:YCL010C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0034613"(cellular protein localization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043970"(histone H3-K9 acetylation)|go:"GO:0043971"(histone H3-K18 acetylation)|go:"GO:0044154"(histone H3-K14 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070868"(obsolete heterochromatin organization involved in chromatin silencing)|go:"GO:0072742"(SAGA complex localization to transcription regulatory region) go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:4DD51E36BB01C073 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y76gVxVXjP5X1WclkIVqTZEhjsk559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53165 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-23812|uniprotkb:D6VU75|ensemblfungi:YGL066W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf73_yeast(display_long)|uniprotkb:YGL066W(locus name)|uniprotkb:SGF73(gene name)|psi-mi:SGF73(display_short)|uniprotkb:73 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 73 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011449.1|sgd:S000003034|dip:DIP-5211N|mint:P53165|ensemblfungi:YGL066W(gene)|ensemblfungi:YGL066W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034622"|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046822"(regulation of nucleocytoplasmic transport)|go:"GO:0071819"(DUBm complex)|go:"GO:1904802"(RITS complex assembly)|go:"GO:1905634"(regulation of protein localization to chromatin)|interpro:IPR013243(SCA7)|interpro:IPR037804|interpro:IPR041251|rcsb pdb:2LO3|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4W4U|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9I|rcsb pdb:6T9K|rcsb pdb:6T9L go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:4618E2E47824321D figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:lHCTTSpU/OTcY8Uo7BtHqRbZL38559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50875 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17751|uniprotkb:D6W1S1|ensemblfungi:YOL148C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt20_yeast(display_long)|uniprotkb:SPT20(gene name)|psi-mi:SPT20(display_short)|uniprotkb:ADA5(gene name synonym)|uniprotkb:YOL148C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_014493.1|sgd:S000005508|ensemblfungi:YOL148C(gene)|ensemblfungi:YOL148C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR021950|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|mint:P50875|dip:DIP-933N go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:3D67937B65F9AA6A figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:XAnaNay1gnY48+TQGMSknSgLR9w559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P06844 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17921|uniprotkb:Q70DE7|uniprotkb:Q70DE9|uniprotkb:Q70DF1|uniprotkb:Q70DF2|uniprotkb:D6VT26|ensemblfungi:YDR392W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt3_yeast(display_long)|uniprotkb:SPT3(gene name)|psi-mi:SPT3(display_short)|uniprotkb:YDR392W(locus name)|uniprotkb:D9509.12(orf name)|uniprotkb:Positive regulator of Ty transcription(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010680.1|sgd:S000002800|ensemblfungi:YDR392W(gene)|ensemblfungi:YDR392W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR003195(Transcription initiation factor IID, 18 kDa subunit)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-2204N|mint:P06844 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:E0F60B61AB155C17 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:uSJbqSttGDguBvx/e2mgMB2tiio559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P35177 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17958|uniprotkb:D6VQ80|ensemblfungi:YBR081C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt7_yeast(display_long)|uniprotkb:YBR0739(orf name)|uniprotkb:YBR081C(locus name)|uniprotkb:SPT7(gene name)|psi-mi:SPT7(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009637.1|sgd:S000000285|ensemblfungi:YBR081C(gene)|ensemblfungi:YBR081C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0034622"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001487(Bromodomain)|interpro:IPR009072(Histone-fold)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037782|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-771N|mint:P35177 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:083B63624669244F figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:U3k+xA1SuVJRX240wH99s5ijrN0559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38915 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17964|uniprotkb:D6VY57|ensemblfungi:YLR055C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt8_yeast(display_long)|uniprotkb:L2144(orf name)|uniprotkb:YLR055C(locus name)|uniprotkb:SPT8(gene name)|psi-mi:SPT8(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_013156.1|sgd:S000004045|ensemblfungi:YLR055C(gene)|ensemblfungi:YLR055C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|dip:DIP-5805N|mint:P38915 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:DDE88155E7638B46 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:s9TdC3f17gMbksFgxF3W3r94RqA559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12030 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18889|uniprotkb:D6VSE7|ensemblfungi:YDR167W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf10_yeast(display_long)|uniprotkb:TAF25(gene name synonym)|uniprotkb:TAFII-23(gene name synonym)|uniprotkb:TAFII-25(gene name synonym)|uniprotkb:TBP-associated factor 10(gene name synonym)|uniprotkb:TBP-associated factor 25 kDa(gene name synonym)|uniprotkb:YD9489.02(orf name)|uniprotkb:YDR167W(locus name)|uniprotkb:TAF10(gene name)|psi-mi:TAF10(display_short)|uniprotkb:TAF23(gene name synonym)|uniprotkb:p25(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002574|ensemblfungi:YDR167W(gene)|ensemblfungi:YDR167W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003923(Transcription initiation factor TFIID, 23-30 kDa subunit)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|refseq:NP_010451.3|dip:DIP-855N|mint:Q12030 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:A472CCA10DC3B495 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:L0BbPHEqUJ/TjaYNF96aRV4Ou0k559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03761 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-35097|uniprotkb:D6VSC8|ensemblfungi:YDR145W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf12_yeast(display_long)|uniprotkb:TAF12(gene name)|psi-mi:TAF12(display_short)|uniprotkb:TAF61(gene name synonym)|uniprotkb:TAF68(gene name synonym)|uniprotkb:YDR145W(locus name)|uniprotkb:YD8358.02(orf name)|uniprotkb:TBP-associated factor 12(gene name synonym)|uniprotkb:TBP-associated factor 61 kDa(gene name synonym)|uniprotkb:TAFII-61(gene name synonym)|uniprotkb:TAFII-68(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010429.1|sgd:S000002552|mint:Q03761|dip:DIP-1302N|ensemblfungi:YDR145W(gene)|ensemblfungi:YDR145W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR003228(Transcription initiation factor TFIID)|interpro:IPR009072(Histone-fold)|interpro:IPR037794|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:A8FC84E46F8370D3 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:DCTuNehYD4fhp7PRgtHZyNIDbH4559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38129 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18868|ensemblfungi:YBR198C|uniprotkb:D6VQJ4 psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf5_yeast(display_long)|uniprotkb:TAF5(gene name)|psi-mi:TAF5(display_short)|uniprotkb:TAF90(gene name synonym)|uniprotkb:YBR198C(locus name)|uniprotkb:YBR1410(orf name)|uniprotkb:TBP-associated factor 5(gene name synonym)|uniprotkb:TBP-associated factor 90 kDa(gene name synonym)|uniprotkb:TAFII-90(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 ensemblfungi:YBR198C(gene)|ensemblfungi:YBR198C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|refseq:NP_009757.1|sgd:S000000402|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR007582(WD40 associated region in TFIID subunit)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037264|interpro:IPR037783|rcsb pdb:2J49|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|dip:DIP-740N|mint:P38129 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:B42315B8C752D0B6 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:QA3hzlcvZh26ejkE7QNXNFP/l2Y559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53040 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18876|uniprotkb:D6VU35|ensemblfungi:YGL112C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf6_yeast(display_long)|uniprotkb:TAF6(gene name)|psi-mi:TAF6(display_short)|uniprotkb:TAF60(gene name synonym)|uniprotkb:YGL112C(locus name)|uniprotkb:G2985(orf name)|uniprotkb:TBP-associated factor 6(gene name synonym)|uniprotkb:TBP-associated factor 60 kDa(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011403.1|sgd:S000003080|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR011442(Protein of unknown function DUF1546)|go:"GO:2000144"(positive regulation of DNA-templated transcription, initiation)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR037796|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|ensemblfungi:YGL112C(gene)|ensemblfungi:YGL112C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|dip:DIP-981N|mint:P53040 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:14B590E02C16F289 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:qmzBE/xAfQskdJqoI8oIqAIa3+A559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q05027 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-27500|uniprotkb:D6W062|ensemblfungi:YMR236W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf9_yeast(display_long)|uniprotkb:TAF9(gene name)|psi-mi:TAF9(display_short)|uniprotkb:TAF17(gene name synonym)|uniprotkb:YMR236W(locus name)|uniprotkb:YM9959.18(orf name)|uniprotkb:TBP-associated factor 9(gene name synonym)|uniprotkb:TBP-associated factor 17 kDa(gene name synonym)|uniprotkb:TAFII-17(gene name synonym)|uniprotkb:TAFII20(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 mint:Q05027|refseq:NP_013963.1|sgd:S000004849|dip:DIP-925N|ensemblfungi:YMR236W(gene)|ensemblfungi:YMR236W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003162(Transcription factor TAFII-31)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:D1C97EDDCA468EC5 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:3+S7ozz3r1gCMvBUUfkGpeTCy/k559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38811 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-24638|uniprotkb:D3DL49|ensemblfungi:YHR099W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:tra1_yeast(display_long)|uniprotkb:TRA1(gene name)|psi-mi:TRA1(display_short)|uniprotkb:p400 kDa component of SAGA(gene name synonym)|uniprotkb:YHR099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011967.1|sgd:S000001141|dip:DIP-805N|mint:P38811|ensemblfungi:YHR099W(gene)|ensemblfungi:YHR099W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0016301"(kinase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070209"(ASTRA complex)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR033317|interpro:IPR036940|rcsb pdb:5OJS|rcsb pdb:6IG9|rcsb pdb:6T9I|rcsb pdb:6T9J go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:AE3588676F5D5777 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:B/rkvJoIvK1Xi2SoNtFnFOdcp2c559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50102 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-19863|uniprotkb:D6W048|ensemblfungi:YMR223W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ubp8_yeast(display_long)|uniprotkb:UBP8(gene name)|psi-mi:UBP8(display_short)|uniprotkb:YMR223W(locus name)|uniprotkb:YM9959.05(orf name)|uniprotkb:Ubiquitin-specific-processing protease 8(gene name synonym)|uniprotkb:Deubiquitinating enzyme 8(gene name synonym)|uniprotkb:Ubiquitin thioesterase 8(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189534 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_013950.1|sgd:S000004836|ensemblfungi:YMR223W(gene)|ensemblfungi:YMR223W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008380"(RNA splicing)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0071819"(DUBm complex)|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR001607(Zinc finger, UBP-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR018200|interpro:IPR028889|interpro:IPR037798|interpro:IPR038765|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L|reactome:R-SCE-5689880|dip:DIP-1506N|mint:P50102 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:BC632F12FBD0F73C figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7vOj35ZOWGzKXD97FlZTEImy3NE559292 intact-crc:4E918C8571599966|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03330 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-7458|uniprotkb:Q6B165|uniprotkb:D6VV32|ensemblfungi:YGR252W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:gcn5_yeast(display_long)|uniprotkb:YGR252W(locus name)|uniprotkb:GCN5(gene name)|psi-mi:GCN5(display_short)|uniprotkb:ADA4(gene name synonym)|uniprotkb:SWI9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011768.1|sgd:S000003484|mint:Q03330|dip:DIP-710N|ensemblfungi:YGR252W(gene)|ensemblfungi:YGR252W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0010484"(H3 histone acetyltransferase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0140068"(histone crotonyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR001487(Bromodomain)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037800|rcsb pdb:1E6I|rcsb pdb:1YGH|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880|reactome:R-SCE-9018519 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:3200730DDC7EF70D figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y8SHidiW4dJo0oxEDksur8MC/L0559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12060 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-8287|uniprotkb:O00039|uniprotkb:Q02813|uniprotkb:D6W3B7|ensemblfungi:YPL254W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:hfi1_yeast(display_long)|uniprotkb:YPL254W(locus name)|uniprotkb:HFI1(gene name)|psi-mi:HFI1(display_short)|uniprotkb:ADA1(gene name synonym)|uniprotkb:SUP110(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015069.1|sgd:S000006175|mint:Q12060|dip:DIP-955N|ensemblfungi:YPL254W(gene)|ensemblfungi:YPL254W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR024738|rcsb pdb:6T9I|rcsb pdb:6T9K go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:B3ACF3C6101AB541 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7re3NqHw5NdglxE67EYjLam7KxY559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P32494 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-2192|uniprotkb:D6VSF8|ensemblfungi:YDR176W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ngg1_yeast(display_long)|uniprotkb:NGG1(gene name)|psi-mi:NGG1(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:YDR176W(locus name)|uniprotkb:YD9395.09(orf name)|uniprotkb:SWI7(gene name synonym)|uniprotkb:Transcriptional adapter 3(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002583|refseq:NP_010461.3|dip:DIP-774N|mint:P32494|ensemblfungi:YDR176W(gene)|ensemblfungi:YDR176W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR019340|reactome:R-SCE-5689880 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:489016BFD1C095D4 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:YZn7437qjQ0OVO7bqlpx9wGSd0k559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03067 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-34550|uniprotkb:D6W3W7|ensemblfungi:YPL047W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf11_yeast(display_long)|uniprotkb:SGF11(gene name)|psi-mi:SGF11(display_short)|uniprotkb:11 kDa SAGA-associated factor(gene name synonym)|uniprotkb:YPL047W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015278.1|sgd:S000005968|mint:Q03067|dip:DIP-39582N|ensemblfungi:YPL047W(gene)|ensemblfungi:YPL047W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0071819"(DUBm complex)|interpro:IPR013246(Sgf11, transcriptional regulation)|interpro:IPR041216|rcsb pdb:2LO2|rcsb pdb:3KIK|rcsb pdb:3KJL|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:31CBBD4CAA18F3F9 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:D1rjYNXMK75P1lJxeQ8oBjl0n+w559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P25554 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-21678|uniprotkb:P87008|uniprotkb:D6VR02|ensemblfungi:YCL010C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf29_yeast(display_long)|uniprotkb:YCL010C(locus name)|uniprotkb:YCL10C(orf name)|uniprotkb:SGF29(gene name)|psi-mi:SGF29(display_short)|uniprotkb:29 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 29 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009917.1|sgd:S000000516|mint:P25554|dip:DIP-4871N|interpro:IPR002999(Tudor)|interpro:IPR010750(Protein of unknown function DUF1325)|interpro:IPR037802|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3MP8|ensemblfungi:YCL010C(gene)|ensemblfungi:YCL010C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0034613"(cellular protein localization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043970"(histone H3-K9 acetylation)|go:"GO:0043971"(histone H3-K18 acetylation)|go:"GO:0044154"(histone H3-K14 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070868"(obsolete heterochromatin organization involved in chromatin silencing)|go:"GO:0072742"(SAGA complex localization to transcription regulatory region) go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:4DD51E36BB01C073 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y76gVxVXjP5X1WclkIVqTZEhjsk559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53165 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-23812|uniprotkb:D6VU75|ensemblfungi:YGL066W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf73_yeast(display_long)|uniprotkb:YGL066W(locus name)|uniprotkb:SGF73(gene name)|psi-mi:SGF73(display_short)|uniprotkb:73 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 73 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011449.1|sgd:S000003034|dip:DIP-5211N|mint:P53165|ensemblfungi:YGL066W(gene)|ensemblfungi:YGL066W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034622"|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046822"(regulation of nucleocytoplasmic transport)|go:"GO:0071819"(DUBm complex)|go:"GO:1904802"(RITS complex assembly)|go:"GO:1905634"(regulation of protein localization to chromatin)|interpro:IPR013243(SCA7)|interpro:IPR037804|interpro:IPR041251|rcsb pdb:2LO3|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4W4U|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9I|rcsb pdb:6T9K|rcsb pdb:6T9L go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:4618E2E47824321D figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:lHCTTSpU/OTcY8Uo7BtHqRbZL38559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50875 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17751|uniprotkb:D6W1S1|ensemblfungi:YOL148C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt20_yeast(display_long)|uniprotkb:SPT20(gene name)|psi-mi:SPT20(display_short)|uniprotkb:ADA5(gene name synonym)|uniprotkb:YOL148C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_014493.1|sgd:S000005508|ensemblfungi:YOL148C(gene)|ensemblfungi:YOL148C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR021950|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|mint:P50875|dip:DIP-933N go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:3D67937B65F9AA6A figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:XAnaNay1gnY48+TQGMSknSgLR9w559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P06844 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17921|uniprotkb:Q70DE7|uniprotkb:Q70DE9|uniprotkb:Q70DF1|uniprotkb:Q70DF2|uniprotkb:D6VT26|ensemblfungi:YDR392W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt3_yeast(display_long)|uniprotkb:SPT3(gene name)|psi-mi:SPT3(display_short)|uniprotkb:YDR392W(locus name)|uniprotkb:D9509.12(orf name)|uniprotkb:Positive regulator of Ty transcription(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010680.1|sgd:S000002800|ensemblfungi:YDR392W(gene)|ensemblfungi:YDR392W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR003195(Transcription initiation factor IID, 18 kDa subunit)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-2204N|mint:P06844 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:E0F60B61AB155C17 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:uSJbqSttGDguBvx/e2mgMB2tiio559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P35177 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17958|uniprotkb:D6VQ80|ensemblfungi:YBR081C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt7_yeast(display_long)|uniprotkb:YBR0739(orf name)|uniprotkb:YBR081C(locus name)|uniprotkb:SPT7(gene name)|psi-mi:SPT7(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009637.1|sgd:S000000285|ensemblfungi:YBR081C(gene)|ensemblfungi:YBR081C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0034622"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001487(Bromodomain)|interpro:IPR009072(Histone-fold)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037782|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-771N|mint:P35177 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:083B63624669244F figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:U3k+xA1SuVJRX240wH99s5ijrN0559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12030 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18889|uniprotkb:D6VSE7|ensemblfungi:YDR167W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf10_yeast(display_long)|uniprotkb:TAF25(gene name synonym)|uniprotkb:TAFII-23(gene name synonym)|uniprotkb:TAFII-25(gene name synonym)|uniprotkb:TBP-associated factor 10(gene name synonym)|uniprotkb:TBP-associated factor 25 kDa(gene name synonym)|uniprotkb:YD9489.02(orf name)|uniprotkb:YDR167W(locus name)|uniprotkb:TAF10(gene name)|psi-mi:TAF10(display_short)|uniprotkb:TAF23(gene name synonym)|uniprotkb:p25(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002574|ensemblfungi:YDR167W(gene)|ensemblfungi:YDR167W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003923(Transcription initiation factor TFIID, 23-30 kDa subunit)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|refseq:NP_010451.3|dip:DIP-855N|mint:Q12030 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:A472CCA10DC3B495 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:L0BbPHEqUJ/TjaYNF96aRV4Ou0k559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03761 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-35097|uniprotkb:D6VSC8|ensemblfungi:YDR145W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf12_yeast(display_long)|uniprotkb:TAF12(gene name)|psi-mi:TAF12(display_short)|uniprotkb:TAF61(gene name synonym)|uniprotkb:TAF68(gene name synonym)|uniprotkb:YDR145W(locus name)|uniprotkb:YD8358.02(orf name)|uniprotkb:TBP-associated factor 12(gene name synonym)|uniprotkb:TBP-associated factor 61 kDa(gene name synonym)|uniprotkb:TAFII-61(gene name synonym)|uniprotkb:TAFII-68(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010429.1|sgd:S000002552|mint:Q03761|dip:DIP-1302N|ensemblfungi:YDR145W(gene)|ensemblfungi:YDR145W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR003228(Transcription initiation factor TFIID)|interpro:IPR009072(Histone-fold)|interpro:IPR037794|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:A8FC84E46F8370D3 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:DCTuNehYD4fhp7PRgtHZyNIDbH4559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38129 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18868|ensemblfungi:YBR198C|uniprotkb:D6VQJ4 psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf5_yeast(display_long)|uniprotkb:TAF5(gene name)|psi-mi:TAF5(display_short)|uniprotkb:TAF90(gene name synonym)|uniprotkb:YBR198C(locus name)|uniprotkb:YBR1410(orf name)|uniprotkb:TBP-associated factor 5(gene name synonym)|uniprotkb:TBP-associated factor 90 kDa(gene name synonym)|uniprotkb:TAFII-90(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 ensemblfungi:YBR198C(gene)|ensemblfungi:YBR198C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|refseq:NP_009757.1|sgd:S000000402|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR007582(WD40 associated region in TFIID subunit)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037264|interpro:IPR037783|rcsb pdb:2J49|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|dip:DIP-740N|mint:P38129 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:B42315B8C752D0B6 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:QA3hzlcvZh26ejkE7QNXNFP/l2Y559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53040 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18876|uniprotkb:D6VU35|ensemblfungi:YGL112C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf6_yeast(display_long)|uniprotkb:TAF6(gene name)|psi-mi:TAF6(display_short)|uniprotkb:TAF60(gene name synonym)|uniprotkb:YGL112C(locus name)|uniprotkb:G2985(orf name)|uniprotkb:TBP-associated factor 6(gene name synonym)|uniprotkb:TBP-associated factor 60 kDa(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011403.1|sgd:S000003080|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR011442(Protein of unknown function DUF1546)|go:"GO:2000144"(positive regulation of DNA-templated transcription, initiation)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR037796|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|ensemblfungi:YGL112C(gene)|ensemblfungi:YGL112C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|dip:DIP-981N|mint:P53040 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:14B590E02C16F289 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:qmzBE/xAfQskdJqoI8oIqAIa3+A559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q05027 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-27500|uniprotkb:D6W062|ensemblfungi:YMR236W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf9_yeast(display_long)|uniprotkb:TAF9(gene name)|psi-mi:TAF9(display_short)|uniprotkb:TAF17(gene name synonym)|uniprotkb:YMR236W(locus name)|uniprotkb:YM9959.18(orf name)|uniprotkb:TBP-associated factor 9(gene name synonym)|uniprotkb:TBP-associated factor 17 kDa(gene name synonym)|uniprotkb:TAFII-17(gene name synonym)|uniprotkb:TAFII20(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 mint:Q05027|refseq:NP_013963.1|sgd:S000004849|dip:DIP-925N|ensemblfungi:YMR236W(gene)|ensemblfungi:YMR236W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003162(Transcription factor TAFII-31)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:D1C97EDDCA468EC5 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:3+S7ozz3r1gCMvBUUfkGpeTCy/k559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38811 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-24638|uniprotkb:D3DL49|ensemblfungi:YHR099W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:tra1_yeast(display_long)|uniprotkb:TRA1(gene name)|psi-mi:TRA1(display_short)|uniprotkb:p400 kDa component of SAGA(gene name synonym)|uniprotkb:YHR099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011967.1|sgd:S000001141|dip:DIP-805N|mint:P38811|ensemblfungi:YHR099W(gene)|ensemblfungi:YHR099W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0016301"(kinase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070209"(ASTRA complex)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR033317|interpro:IPR036940|rcsb pdb:5OJS|rcsb pdb:6IG9|rcsb pdb:6T9I|rcsb pdb:6T9J go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:AE3588676F5D5777 figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:B/rkvJoIvK1Xi2SoNtFnFOdcp2c559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50102 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-19863|uniprotkb:D6W048|ensemblfungi:YMR223W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ubp8_yeast(display_long)|uniprotkb:UBP8(gene name)|psi-mi:UBP8(display_short)|uniprotkb:YMR223W(locus name)|uniprotkb:YM9959.05(orf name)|uniprotkb:Ubiquitin-specific-processing protease 8(gene name synonym)|uniprotkb:Deubiquitinating enzyme 8(gene name synonym)|uniprotkb:Ubiquitin thioesterase 8(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189559 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_013950.1|sgd:S000004836|ensemblfungi:YMR223W(gene)|ensemblfungi:YMR223W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008380"(RNA splicing)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0071819"(DUBm complex)|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR001607(Zinc finger, UBP-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR018200|interpro:IPR028889|interpro:IPR037798|interpro:IPR038765|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L|reactome:R-SCE-5689880|dip:DIP-1506N|mint:P50102 go:"GO:0046695"("SLIK (SAGA-like) complex") crc64:9637E1EDBBED0AC3 crc64:BC632F12FBD0F73C figure legend:1 and 2|caution:Deletion of Sgf11 results in deletion of Ubp8 from this complex. Sgf11 deletion does not affect the integrity or acetyltransferase activity of either SAGA or SLIK.|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7vOj35ZOWGzKXD97FlZTEImy3NE559292 intact-crc:C6B7F7A8023724C4|rigid:0sWWtGiDavO+RPIg0fdO/jmo4R4 false calmodulin binding peptide plus protein a tag:?-? - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03330 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-7458|uniprotkb:Q6B165|uniprotkb:D6VV32|ensemblfungi:YGR252W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:gcn5_yeast(display_long)|uniprotkb:YGR252W(locus name)|uniprotkb:GCN5(gene name)|psi-mi:GCN5(display_short)|uniprotkb:ADA4(gene name synonym)|uniprotkb:SWI9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011768.1|sgd:S000003484|mint:Q03330|dip:DIP-710N|ensemblfungi:YGR252W(gene)|ensemblfungi:YGR252W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000775"(chromosome, centromeric region)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0004402"(histone acetyltransferase activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0010484"(H3 histone acetyltransferase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0032968"(positive regulation of transcription elongation from RNA polymerase II promoter)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0140068"(histone crotonyltransferase activity)|interpro:IPR000182(GCN5-related N-acetyltransferase)|interpro:IPR001487(Bromodomain)|interpro:IPR016181(Acyl-CoA N-acyltransferase)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037800|rcsb pdb:1E6I|rcsb pdb:1YGH|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880|reactome:R-SCE-9018519 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:3200730DDC7EF70D figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y8SHidiW4dJo0oxEDksur8MC/L0559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12060 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-8287|uniprotkb:O00039|uniprotkb:Q02813|uniprotkb:D6W3B7|ensemblfungi:YPL254W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:hfi1_yeast(display_long)|uniprotkb:YPL254W(locus name)|uniprotkb:HFI1(gene name)|psi-mi:HFI1(display_short)|uniprotkb:ADA1(gene name synonym)|uniprotkb:SUP110(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015069.1|sgd:S000006175|mint:Q12060|dip:DIP-955N|ensemblfungi:YPL254W(gene)|ensemblfungi:YPL254W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR024738|rcsb pdb:6T9I|rcsb pdb:6T9K go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:B3ACF3C6101AB541 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7re3NqHw5NdglxE67EYjLam7KxY559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P32494 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-2192|uniprotkb:D6VSF8|ensemblfungi:YDR176W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ngg1_yeast(display_long)|uniprotkb:NGG1(gene name)|psi-mi:NGG1(display_short)|uniprotkb:ADA3(gene name synonym)|uniprotkb:YDR176W(locus name)|uniprotkb:YD9395.09(orf name)|uniprotkb:SWI7(gene name synonym)|uniprotkb:Transcriptional adapter 3(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002583|refseq:NP_010461.3|dip:DIP-774N|mint:P32494|ensemblfungi:YDR176W(gene)|ensemblfungi:YDR176W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR019340|reactome:R-SCE-5689880 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:489016BFD1C095D4 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:YZn7437qjQ0OVO7bqlpx9wGSd0k559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03067 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-34550|uniprotkb:D6W3W7|ensemblfungi:YPL047W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf11_yeast(display_long)|uniprotkb:SGF11(gene name)|psi-mi:SGF11(display_short)|uniprotkb:11 kDa SAGA-associated factor(gene name synonym)|uniprotkb:YPL047W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_015278.1|sgd:S000005968|mint:Q03067|dip:DIP-39582N|ensemblfungi:YPL047W(gene)|ensemblfungi:YPL047W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0008270"(zinc ion binding)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0071819"(DUBm complex)|interpro:IPR013246(Sgf11, transcriptional regulation)|interpro:IPR041216|rcsb pdb:2LO2|rcsb pdb:3KIK|rcsb pdb:3KJL|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:31CBBD4CAA18F3F9 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:D1rjYNXMK75P1lJxeQ8oBjl0n+w559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P25554 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-21678|uniprotkb:P87008|uniprotkb:D6VR02|ensemblfungi:YCL010C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf29_yeast(display_long)|uniprotkb:YCL010C(locus name)|uniprotkb:YCL10C(orf name)|uniprotkb:SGF29(gene name)|psi-mi:SGF29(display_short)|uniprotkb:29 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 29 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009917.1|sgd:S000000516|mint:P25554|dip:DIP-4871N|interpro:IPR002999(Tudor)|interpro:IPR010750(Protein of unknown function DUF1325)|interpro:IPR037802|rcsb pdb:3MP1|rcsb pdb:3MP6|rcsb pdb:3MP8|ensemblfungi:YCL010C(gene)|ensemblfungi:YCL010C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0034613"(cellular protein localization)|go:"GO:0035064"(methylated histone binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0043970"(histone H3-K9 acetylation)|go:"GO:0043971"(histone H3-K18 acetylation)|go:"GO:0044154"(histone H3-K14 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0070868"(obsolete heterochromatin organization involved in chromatin silencing)|go:"GO:0072742"(SAGA complex localization to transcription regulatory region) go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:4DD51E36BB01C073 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:Y76gVxVXjP5X1WclkIVqTZEhjsk559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53165 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-23812|uniprotkb:D6VU75|ensemblfungi:YGL066W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:sgf73_yeast(display_long)|uniprotkb:YGL066W(locus name)|uniprotkb:SGF73(gene name)|psi-mi:SGF73(display_short)|uniprotkb:73 kDa SAGA-associated factor(gene name synonym)|uniprotkb:SAGA histone acetyltransferase complex 73 kDa subunit(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011449.1|sgd:S000003034|dip:DIP-5211N|mint:P53165|ensemblfungi:YGL066W(gene)|ensemblfungi:YGL066W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006406"(mRNA export from nucleus)|go:"GO:0008047"(enzyme activator activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034622"|go:"GO:0045899"(positive regulation of RNA polymerase II transcription preinitiation complex assembly)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046822"(regulation of nucleocytoplasmic transport)|go:"GO:0071819"(DUBm complex)|go:"GO:1904802"(RITS complex assembly)|go:"GO:1905634"(regulation of protein localization to chromatin)|interpro:IPR013243(SCA7)|interpro:IPR037804|interpro:IPR041251|rcsb pdb:2LO3|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4W4U|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9I|rcsb pdb:6T9K|rcsb pdb:6T9L go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:4618E2E47824321D figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:lHCTTSpU/OTcY8Uo7BtHqRbZL38559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50875 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17751|uniprotkb:D6W1S1|ensemblfungi:YOL148C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt20_yeast(display_long)|uniprotkb:SPT20(gene name)|psi-mi:SPT20(display_short)|uniprotkb:ADA5(gene name synonym)|uniprotkb:YOL148C(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_014493.1|sgd:S000005508|ensemblfungi:YOL148C(gene)|ensemblfungi:YOL148C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0036498"(IRE1-mediated unfolded protein response)|go:"GO:0046695"("SLIK (SAGA-like) complex")|interpro:IPR021950|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|mint:P50875|dip:DIP-933N go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:3D67937B65F9AA6A figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:XAnaNay1gnY48+TQGMSknSgLR9w559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P06844 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17921|uniprotkb:Q70DE7|uniprotkb:Q70DE9|uniprotkb:Q70DF1|uniprotkb:Q70DF2|uniprotkb:D6VT26|ensemblfungi:YDR392W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt3_yeast(display_long)|uniprotkb:SPT3(gene name)|psi-mi:SPT3(display_short)|uniprotkb:YDR392W(locus name)|uniprotkb:D9509.12(orf name)|uniprotkb:Positive regulator of Ty transcription(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010680.1|sgd:S000002800|ensemblfungi:YDR392W(gene)|ensemblfungi:YDR392W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0001403"(invasive growth in response to glucose limitation)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0007124"(pseudohyphal growth)|go:"GO:0016573"(histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR003195(Transcription initiation factor IID, 18 kDa subunit)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-2204N|mint:P06844 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:E0F60B61AB155C17 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:uSJbqSttGDguBvx/e2mgMB2tiio559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P35177 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17958|uniprotkb:D6VQ80|ensemblfungi:YBR081C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt7_yeast(display_long)|uniprotkb:YBR0739(orf name)|uniprotkb:YBR081C(locus name)|uniprotkb:SPT7(gene name)|psi-mi:SPT7(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_009637.1|sgd:S000000285|ensemblfungi:YBR081C(gene)|ensemblfungi:YBR081C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000747"(conjugation with cellular fusion)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005739"(mitochondrion)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0034622"|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|interpro:IPR001487(Bromodomain)|interpro:IPR009072(Histone-fold)|interpro:IPR018359|interpro:IPR036427|interpro:IPR037782|rcsb pdb:6T9I|rcsb pdb:6T9K|dip:DIP-771N|mint:P35177 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:083B63624669244F figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:U3k+xA1SuVJRX240wH99s5ijrN0559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38915 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-17964|uniprotkb:D6VY57|ensemblfungi:YLR055C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:spt8_yeast(display_long)|uniprotkb:L2144(orf name)|uniprotkb:YLR055C(locus name)|uniprotkb:SPT8(gene name)|psi-mi:SPT8(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_013156.1|sgd:S000004045|ensemblfungi:YLR055C(gene)|ensemblfungi:YLR055C_mRNA(transcript)|go:"GO:0000122"(negative regulation of transcription by RNA polymerase II)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001680(WD40 repeat)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR036322|dip:DIP-5805N|mint:P38915 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:DDE88155E7638B46 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:s9TdC3f17gMbksFgxF3W3r94RqA559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q12030 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18889|uniprotkb:D6VSE7|ensemblfungi:YDR167W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf10_yeast(display_long)|uniprotkb:TAF25(gene name synonym)|uniprotkb:TAFII-23(gene name synonym)|uniprotkb:TAFII-25(gene name synonym)|uniprotkb:TBP-associated factor 10(gene name synonym)|uniprotkb:TBP-associated factor 25 kDa(gene name synonym)|uniprotkb:YD9489.02(orf name)|uniprotkb:YDR167W(locus name)|uniprotkb:TAF10(gene name)|psi-mi:TAF10(display_short)|uniprotkb:TAF23(gene name synonym)|uniprotkb:p25(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 sgd:S000002574|ensemblfungi:YDR167W(gene)|ensemblfungi:YDR167W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003923(Transcription initiation factor TFIID, 23-30 kDa subunit)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|refseq:NP_010451.3|dip:DIP-855N|mint:Q12030 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:A472CCA10DC3B495 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:L0BbPHEqUJ/TjaYNF96aRV4Ou0k559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q03761 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-35097|uniprotkb:D6VSC8|ensemblfungi:YDR145W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf12_yeast(display_long)|uniprotkb:TAF12(gene name)|psi-mi:TAF12(display_short)|uniprotkb:TAF61(gene name synonym)|uniprotkb:TAF68(gene name synonym)|uniprotkb:YDR145W(locus name)|uniprotkb:YD8358.02(orf name)|uniprotkb:TBP-associated factor 12(gene name synonym)|uniprotkb:TBP-associated factor 61 kDa(gene name synonym)|uniprotkb:TAFII-61(gene name synonym)|uniprotkb:TAFII-68(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_010429.1|sgd:S000002552|mint:Q03761|dip:DIP-1302N|ensemblfungi:YDR145W(gene)|ensemblfungi:YDR145W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003677"(DNA binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0017025"(TBP-class protein binding)|go:"GO:0042802"(identical protein binding)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|interpro:IPR003228(Transcription initiation factor TFIID)|interpro:IPR009072(Histone-fold)|interpro:IPR037794|rcsb pdb:6T9I|rcsb pdb:6T9J|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:A8FC84E46F8370D3 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:DCTuNehYD4fhp7PRgtHZyNIDbH4559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38129 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18868|ensemblfungi:YBR198C|uniprotkb:D6VQJ4 psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf5_yeast(display_long)|uniprotkb:TAF5(gene name)|psi-mi:TAF5(display_short)|uniprotkb:TAF90(gene name synonym)|uniprotkb:YBR198C(locus name)|uniprotkb:YBR1410(orf name)|uniprotkb:TBP-associated factor 5(gene name synonym)|uniprotkb:TBP-associated factor 90 kDa(gene name synonym)|uniprotkb:TAFII-90(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 ensemblfungi:YBR198C(gene)|ensemblfungi:YBR198C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043130"(ubiquitin binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|refseq:NP_009757.1|sgd:S000000402|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR001680(WD40 repeat)|interpro:IPR006594(LisH dimerisation motif)|interpro:IPR007582(WD40 associated region in TFIID subunit)|interpro:IPR015943(WD40/YVTN repeat-like)|interpro:IPR019775|interpro:IPR020472|interpro:IPR036322|interpro:IPR037264|interpro:IPR037783|rcsb pdb:2J49|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|dip:DIP-740N|mint:P38129 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:B42315B8C752D0B6 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:QA3hzlcvZh26ejkE7QNXNFP/l2Y559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P53040 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-18876|uniprotkb:D6VU35|ensemblfungi:YGL112C psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf6_yeast(display_long)|uniprotkb:TAF6(gene name)|psi-mi:TAF6(display_short)|uniprotkb:TAF60(gene name synonym)|uniprotkb:YGL112C(locus name)|uniprotkb:G2985(orf name)|uniprotkb:TBP-associated factor 6(gene name synonym)|uniprotkb:TBP-associated factor 60 kDa(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011403.1|sgd:S000003080|interpro:IPR004823("TATA box binding protein associated factor (TAF)")|interpro:IPR009072(Histone-fold)|interpro:IPR011442(Protein of unknown function DUF1546)|go:"GO:2000144"(positive regulation of DNA-templated transcription, initiation)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR037796|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042|ensemblfungi:YGL112C(gene)|ensemblfungi:YGL112C_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|dip:DIP-981N|mint:P53040 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:14B590E02C16F289 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:qmzBE/xAfQskdJqoI8oIqAIa3+A559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:Q05027 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-27500|uniprotkb:D6W062|ensemblfungi:YMR236W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:taf9_yeast(display_long)|uniprotkb:TAF9(gene name)|psi-mi:TAF9(display_short)|uniprotkb:TAF17(gene name synonym)|uniprotkb:YMR236W(locus name)|uniprotkb:YM9959.18(orf name)|uniprotkb:TBP-associated factor 9(gene name synonym)|uniprotkb:TBP-associated factor 17 kDa(gene name synonym)|uniprotkb:TAFII-17(gene name synonym)|uniprotkb:TAFII20(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 mint:Q05027|refseq:NP_013963.1|sgd:S000004849|dip:DIP-925N|ensemblfungi:YMR236W(gene)|ensemblfungi:YMR236W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0016573"(histone acetylation)|go:"GO:0042802"(identical protein binding)|go:"GO:0043966"(histone H3 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0046982"(protein heterodimerization activity)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:0060090"(molecular adaptor activity)|interpro:IPR003162(Transcription factor TAFII-31)|interpro:IPR009072(Histone-fold)|rcsb pdb:6T9I|rcsb pdb:6T9K|reactome:R-SCE-5689880|reactome:R-SCE-674695|reactome:R-SCE-6807505|reactome:R-SCE-73776|reactome:R-SCE-73779|reactome:R-SCE-75953|reactome:R-SCE-76042 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:D1C97EDDCA468EC5 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:3+S7ozz3r1gCMvBUUfkGpeTCy/k559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P38811 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-24638|uniprotkb:D3DL49|ensemblfungi:YHR099W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:tra1_yeast(display_long)|uniprotkb:TRA1(gene name)|psi-mi:TRA1(display_short)|uniprotkb:p400 kDa component of SAGA(gene name synonym)|uniprotkb:YHR099W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_011967.1|sgd:S000001141|dip:DIP-805N|mint:P38811|ensemblfungi:YHR099W(gene)|ensemblfungi:YHR099W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0006281"(DNA repair)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006468"(protein phosphorylation)|go:"GO:0016301"(kinase activity)|go:"GO:0016573"(histone acetylation)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070209"(ASTRA complex)|interpro:IPR000403(Phosphatidylinositol 3- and 4-kinase, catalytic)|interpro:IPR003151(PIK-related kinase, FAT)|interpro:IPR003152(PIK-related kinase, FATC)|interpro:IPR011009(Protein kinase-like)|interpro:IPR014009(PIK-related kinase)|interpro:IPR016024(Armadillo-type fold)|interpro:IPR033317|interpro:IPR036940|rcsb pdb:5OJS|rcsb pdb:6IG9|rcsb pdb:6T9I|rcsb pdb:6T9J go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:AE3588676F5D5777 figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:B/rkvJoIvK1Xi2SoNtFnFOdcp2c559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q02336 uniprotkb:P50102 intact:EBI-2186|uniprotkb:D6VT73|ensemblfungi:YDR448W intact:EBI-19863|uniprotkb:D6W048|ensemblfungi:YMR223W psi-mi:ada2_yeast(display_long)|uniprotkb:ADA2(gene name)|psi-mi:ADA2(display_short)|uniprotkb:D9461.33(orf name)|uniprotkb:YDR448W(locus name) psi-mi:ubp8_yeast(display_long)|uniprotkb:UBP8(gene name)|psi-mi:UBP8(display_short)|uniprotkb:YMR223W(locus name)|uniprotkb:YM9959.05(orf name)|uniprotkb:Ubiquitin-specific-processing protease 8(gene name synonym)|uniprotkb:Deubiquitinating enzyme 8(gene name synonym)|uniprotkb:Ubiquitin thioesterase 8(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189595 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) sgd:S000002856|refseq:NP_010736.3|dip:DIP-183N|mint:Q02336|ensemblfungi:YDR448W(gene)|ensemblfungi:YDR448W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0000183"(rDNA heterochromatin assembly)|go:"GO:0000781"(chromosome, telomeric region)|go:"GO:0001786"(phosphatidylserine binding)|go:"GO:0003682"(chromatin binding)|go:"GO:0003713"(transcription coactivator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005671"(obsolete Ada2/Gcn5/Ada3 transcription activator complex)|go:"GO:0006325"(chromatin organization)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006348"|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0008270"(zinc ion binding)|go:"GO:0035066"(positive regulation of histone acetylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0070461"(SAGA-type complex)|go:"GO:1990414"(replication-born double-strand break repair via sister chromatid exchange)|interpro:IPR000433(Zinc finger, ZZ-type)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR016827(Transcriptional adaptor 2)|interpro:IPR017884|interpro:IPR017930|interpro:IPR036388|interpro:IPR041983|interpro:IPR043145|rcsb pdb:2ELJ|rcsb pdb:6CW2|rcsb pdb:6CW3|reactome:R-SCE-5689880 refseq:NP_013950.1|sgd:S000004836|ensemblfungi:YMR223W(gene)|ensemblfungi:YMR223W_mRNA(transcript)|go:"GO:0000124"(SAGA complex)|go:"GO:0004843"(thiol-dependent deubiquitinase)|go:"GO:0006511"(ubiquitin-dependent protein catabolic process)|go:"GO:0008270"(zinc ion binding)|go:"GO:0008380"(RNA splicing)|go:"GO:0016578"(histone deubiquitination)|go:"GO:0034729"(histone H3-K79 methylation)|go:"GO:0046695"("SLIK (SAGA-like) complex")|go:"GO:0051568"(histone H3-K4 methylation)|go:"GO:0060090"(molecular adaptor activity)|go:"GO:0071819"(DUBm complex)|interpro:IPR001394(Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2)|interpro:IPR001607(Zinc finger, UBP-type)|interpro:IPR013083(Zinc finger, RING/FYVE/PHD-type)|interpro:IPR018200|interpro:IPR028889|interpro:IPR037798|interpro:IPR038765|rcsb pdb:3M99|rcsb pdb:3MHH|rcsb pdb:3MHS|rcsb pdb:4FIP|rcsb pdb:4FJC|rcsb pdb:4FK5|rcsb pdb:4WA6|rcsb pdb:4ZUX|rcsb pdb:6AQR|rcsb pdb:6T9L|reactome:R-SCE-5689880|dip:DIP-1506N|mint:P50102 go:"GO:0000124"(SAGA complex) crc64:9637E1EDBBED0AC3 crc64:BC632F12FBD0F73C figure legend:1|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:Yz+0dWGKNP6/ELscgW0yuQk/EyY559292 rogid:7vOj35ZOWGzKXD97FlZTEImy3NE559292 intact-crc:4D52F9DC2F5FCEE9|rigid:UnDqIi8WDqVEdAy5wQuAK5Ph74Q false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:Q05123 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-2972|uniprotkb:D6VZK8|ensemblfungi:YMR033W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:arp9_yeast(display_long)|uniprotkb:ARP9(gene name)|psi-mi:ARP9(display_short)|uniprotkb:SWP59(gene name synonym)|uniprotkb:YMR033W(locus name)|uniprotkb:YM9973.07(orf name)|uniprotkb:Chromatin structure-remodeling complex protein ARP9(gene name synonym)|uniprotkb:SWI/SNF complex component ARP9(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_013747.1|sgd:S000004636|dip:DIP-6709N|mint:Q05123|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YMR033W(gene)|ensemblfungi:YMR033W_mRNA(transcript)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016586"(RSC-type complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:EE1AB154A906420E figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:bn+KSKckXTEdvwOpf5DiKsRy484559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P38144 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-21087|uniprotkb:D6VQP1|ensemblfungi:YBR245C psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:isw1_yeast(display_long)|uniprotkb:YBR1633(orf name)|uniprotkb:YBR245C(locus name)|uniprotkb:ISW1(gene name)|psi-mi:ISW1(display_short) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_009804.1|sgd:S000000449|mint:P38144|dip:DIP-6601N|interpro:IPR038718|interpro:IPR044754|rcsb pdb:2Y9Y|rcsb pdb:2Y9Z|rcsb pdb:6IRO|rcsb pdb:6JYL|rcsb pdb:6K1P|interpro:IPR036306|ensemblfungi:YBR245C(gene)|ensemblfungi:YBR245C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0000976"(transcription cis-regulatory region binding)|go:"GO:0001178"(regulation of transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0004386"(helicase activity)|go:"GO:0005634"(nucleus)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006354"(DNA-templated transcription, elongation)|go:"GO:0006363"(termination of RNA polymerase I transcription)|go:"GO:0006369"(termination of RNA polymerase II transcription)|go:"GO:0007062"(sister chromatid cohesion)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016584"(nucleosome positioning)|go:"GO:0016787"(hydrolase activity)|go:"GO:0030874"(nucleolar chromatin)|go:"GO:0031491"(nucleosome binding)|go:"GO:0036436"(Isw1a complex)|go:"GO:0036437"(Isw1b complex)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0060303"(regulation of nucleosome density)|go:"GO:0070615"|go:"GO:0070829"(obsolete heterochromatin maintenance)|go:"GO:1900050"(negative regulation of histone exchange)|go:"GO:1902275"(regulation of chromatin organization)|interpro:IPR000330(SNF2-related)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR009057(Homeodomain-like)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR015194(Nucleosome remodelling ATPase ISWI, HAND)|go:"GO:0005524"(ATP binding)|interpro:IPR015195(SLIDE)|interpro:IPR017884|interpro:IPR027417 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:2CF86BAF553E6695 figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:4JcN3en+Gq2GAzhGAyoiR22QCAg559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P53330 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-23637|uniprotkb:D6VV52|ensemblfungi:YGR275W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:rt102_yeast(display_long)|uniprotkb:RTT102(gene name)|psi-mi:RTT102(display_short)|uniprotkb:G9378(orf name)|uniprotkb:YGR275W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_011791.4|sgd:S000003507|dip:DIP-3864N|mint:P53330|ensemblfungi:YGR275W(gene)|ensemblfungi:YGR275W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0007059"(chromosome segregation)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|interpro:IPR018304 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 - figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:/DVamY55v9Ty3kmHzpK9s+Wakpg559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P38956 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17560|uniprotkb:D6VS59|ensemblfungi:YDR073W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf11_yeast(display_long)|uniprotkb:SNF11(gene name)|psi-mi:SNF11(display_short)|uniprotkb:YDR073W(locus name)|uniprotkb:D4411(orf name)|uniprotkb:SWI/SNF complex component SNF11(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 sgd:S000002480|ensemblfungi:YDR073W(gene)|ensemblfungi:YDR073W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|refseq:NP_010358.3|dip:DIP-1530N go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 - figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:MJt1Gl5fXX0WJ0kg5YACC7lGxf0559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P53628 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17564|uniprotkb:D6W1J8|ensemblfungi:YNR023W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf12_yeast(display_long)|uniprotkb:SNF12(gene name)|psi-mi:SNF12(display_short)|uniprotkb:SWP73(gene name synonym)|uniprotkb:YNR023W(locus name)|uniprotkb:N3224(orf name)|uniprotkb:SWI/SNF complex component SWP73(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_014420.1|sgd:S000005306|ensemblfungi:YNR023W(gene)|ensemblfungi:YNR023W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|interpro:IPR036885|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-2443N|mint:P53628 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:CD6E61EEEE85098C figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:ZlOLOqBhD/vTk/ElJEQCUqB3QmA559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P22082 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17526|uniprotkb:D6W2Y8|ensemblfungi:YOR290C psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf2_yeast(display_long)|uniprotkb:SNF2(gene name)|psi-mi:SNF2(display_short)|uniprotkb:GAM1(gene name synonym)|uniprotkb:SWI2(gene name synonym)|uniprotkb:RIC1(gene name synonym)|uniprotkb:TYE3(gene name synonym)|uniprotkb:YOR290C(locus name)|uniprotkb:ATP-dependent helicase SNF2(gene name synonym)|uniprotkb:SWI/SNF complex component SNF2(gene name synonym)|uniprotkb:Regulatory protein SWI2(gene name synonym)|uniprotkb:Regulatory protein GAM1(gene name synonym)|uniprotkb:Transcription factor TYE3(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_014933.3|sgd:S000005816|ensemblfungi:YOR290C(gene)|ensemblfungi:YOR290C_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0003677"(DNA binding)|go:"GO:0004386"(helicase activity)|go:"GO:0005524"(ATP binding)|go:"GO:0005634"(nucleus)|go:"GO:0006261"(DNA-dependent DNA replication)|go:"GO:0006302"(double-strand break repair)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006979"(response to oxidative stress)|go:"GO:0008094"(ATP-dependent activity, acting on DNA)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016787"(hydrolase activity)|go:"GO:0031492"(nucleosomal DNA binding)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0035973"(aggrephagy)|go:"GO:0042148"(strand invasion)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061412"(positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:0070577"(lysine-acetylated histone binding)|go:"GO:0070615"|go:"GO:1900189"(positive regulation of cell adhesion involved in single-species biofilm formation)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR000330(SNF2-related)|interpro:IPR001487(Bromodomain)|interpro:IPR001650(DNA/RNA helicase, C-terminal)|interpro:IPR014001(DEAD-like helicase, N-terminal)|interpro:IPR014012(Helicase/SANT-associated, DNA binding)|interpro:IPR014978(QLQ)|interpro:IPR017956|interpro:IPR018359|interpro:IPR027417|interpro:IPR029295|interpro:IPR036427|interpro:IPR038718|rcsb pdb:4I6M|rcsb pdb:5X0X|rcsb pdb:5X0Y|rcsb pdb:5Z3L|rcsb pdb:5Z3O|rcsb pdb:5Z3U|rcsb pdb:5Z3V|rcsb pdb:6IY2|rcsb pdb:6IY3|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|dip:DIP-1150N|mint:P22082 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:84B8BC595C8F3E6D figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:ci+ofV+hVtoh5xvcwV+wLmObJaE559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P18480 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17546|ensemblfungi:YBR289W|uniprotkb:D6VQT4 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf5_yeast(display_long)|uniprotkb:SNF5(gene name)|psi-mi:SNF5(display_short)|uniprotkb:SWI10(gene name synonym)|uniprotkb:TYE4(gene name synonym)|uniprotkb:YBR2036(orf name)|uniprotkb:YBR289W(locus name)|uniprotkb:SWI/SNF complex subunit SNF5(gene name synonym)|uniprotkb:Transcription regulatory protein SNF5(gene name synonym)|uniprotkb:Transcription factor TYE4(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 ensemblfungi:YBR289W(gene)|ensemblfungi:YBR289W_mRNA(transcript)|go:"GO:0000228"(nuclear chromosome)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0000724"(double-strand break repair via homologous recombination)|go:"GO:0003712"(transcription coregulator activity)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|go:"GO:0061629"(RNA polymerase II-specific DNA-binding transcription factor binding)|go:"GO:2000219"(positive regulation of invasive growth in response to glucose limitation)|interpro:IPR006939(SNF5/SMARCB1/INI1)|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|sgd:S000000493|refseq:NP_009848.4|dip:DIP-2364N|mint:P18480 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:F6D31A57E6D6DA94 figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:junuY0hqpGZ0JpVKX0jFf938OKE559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P18888 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-17550|uniprotkb:D3DKU3|ensemblfungi:YHL025W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:snf6_yeast(display_long)|uniprotkb:SNF6(gene name)|psi-mi:SNF6(display_short)|uniprotkb:YHL025W(locus name)|uniprotkb:SWI/SNF complex component SNF6(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 go:"GO:0005829"(cytosol)|refseq:NP_011838.1|sgd:S000001017|go:"GO:0006338"(chromatin remodeling)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045943"(positive regulation of transcription by RNA polymerase I)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|go:"GO:0006289"(nucleotide-excision repair)|ensemblfungi:YHL025W(gene)|ensemblfungi:YHL025W_mRNA(transcript)|go:"GO:0000182"(rDNA binding)|go:"GO:0000470"(maturation of LSU-rRNA)|go:"GO:0005634"(nucleus)|dip:DIP-1226N|mint:P18888 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:ED9EA9F313F9079F figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:OjRVJEikcmyHBr/qDYYwQ1TgP1c559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - calmodulin binding peptide plus protein a tag:?-? - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P32591 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-18622|ensemblfungi:YJL176C|uniprotkb:D6VW13 psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:swi3_yeast(display_long)|uniprotkb:SWI3(gene name)|psi-mi:SWI3(display_short)|uniprotkb:TYE2(gene name synonym)|uniprotkb:J0495(orf name)|uniprotkb:YJL176C(locus name)|uniprotkb:Transcription regulatory protein SWI3(gene name synonym)|uniprotkb:Transcription factor TYE2(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 ensemblfungi:YJL176C(gene)|go:"GO:0000436"(carbon catabolite activation of transcription from RNA polymerase II promoter)|go:"GO:0003677"(DNA binding)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0031496"(positive regulation of mating type switching)|go:"GO:0042393"(histone binding)|go:"GO:0043044"|go:"GO:0045893"(positive regulation of transcription, DNA-templated)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR001005(SANT, DNA-binding)|interpro:IPR007526(SWIRM)|interpro:IPR009057(Homeodomain-like)|interpro:IPR017884|interpro:IPR017930|interpro:IPR032451|interpro:IPR036388|rcsb pdb:2FQ3|rcsb pdb:6L9J|rcsb pdb:6UXV|rcsb pdb:6UXW|rcsb pdb:7C4J|reactome:R-SCE-3214858|ensemblfungi:YJL176C_mRNA(transcript)|refseq:NP_012359.1|sgd:S000003712|dip:DIP-2471N|mint:P32591 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:DBA2E2022F15F9A6 figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:nS1Z019Zv1HTDCHajHw2lvqLt14559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P43554 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-22851|uniprotkb:D6VTI1|ensemblfungi:YFL049W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:swp82_yeast(display_long)|uniprotkb:SWP82(gene name)|psi-mi:SWP82(display_short)|uniprotkb:YFL049W(locus name) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_116605.1|sgd:S000001845|dip:DIP-4202N|mint:P43554|ensemblfungi:YFL049W(gene)|ensemblfungi:YFL049W_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005829"(cytosol)|go:"GO:0006325"(chromatin organization)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR013933(Chromatin remodelling complex, RSC SWI/SNF subunit Rsc7/Swp82)|rcsb pdb:7C4J|reactome:R-SCE-4551638 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:A8AC00CAC8F0ED0E figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:/Pn3lcaaJtD+1BiVBpt99lcvSeo559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology) uniprotkb:Q12406 uniprotkb:P35189 intact:EBI-2962|uniprotkb:D6W444|ensemblfungi:YPR034W intact:EBI-18920|uniprotkb:Q02460|uniprotkb:D6W3N8|ensemblfungi:YPL129W psi-mi:arp7_yeast(display_long)|uniprotkb:ARP7(gene name)|psi-mi:ARP7(display_short)|uniprotkb:SWP61(gene name synonym)|uniprotkb:YPR034W(locus name)|uniprotkb:YP9367.14(orf name)|uniprotkb:Actin-like protein ARP7(gene name synonym)|uniprotkb:Chromatin structure-remodeling complex protein ARP7(gene name synonym)|uniprotkb:SWI/SNF complex component ARP7(gene name synonym) psi-mi:taf14_yeast(display_long)|uniprotkb:ANC1(gene name synonym)|uniprotkb:CST10(gene name synonym)|uniprotkb:YPL129W(locus name)|uniprotkb:TAF14(gene name)|psi-mi:TAF14(display_short)|uniprotkb:SWP29(gene name synonym)|uniprotkb:TAF30(gene name synonym)|uniprotkb:TFG3(gene name synonym)|uniprotkb:TBP-associated factor 14(gene name synonym)|uniprotkb:TBP-associated factor 30 kDa(gene name synonym)|uniprotkb:Transcription initiation factor TFIIF 30 kDa subunit(gene name synonym)|uniprotkb:Transcription factor G 30 kDa subunit(gene name synonym)|uniprotkb:SWI/SNF chromatin-remodeling complex subunit TAF14(gene name synonym)|uniprotkb:SWI/SNF complex subunit TAF14(gene name synonym)|uniprotkb:SWI/SNF complex 29 kDa subunit(gene name synonym)|uniprotkb:Actin non-complementing mutant 1(gene name synonym)|uniprotkb:Chromosome stability protein 10(gene name synonym) psi-mi:"MI:0004"(affinity chromatography technology) Lee et al. (2004) pubmed:15506919 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0914"(association) psi-mi:"MI:0469"(IntAct) intact:EBI-1189658 - psi-mi:"MI:1060"(spoke expansion) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0497"(neutral component) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_015359.1|sgd:S000006238|dip:DIP-6351N|mint:Q12406|ensemblfungi:YPR034W(gene)|ensemblfungi:YPR034W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005198"(structural molecule activity)|go:"GO:0005634"(nucleus)|go:"GO:0006325"(chromatin organization)|go:"GO:0006337"(nucleosome disassembly)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006357"(regulation of transcription by RNA polymerase II)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016586"(RSC-type complex)|go:"GO:0035267"(NuA4 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0043044"|go:"GO:0043967"(histone H4 acetylation)|go:"GO:0045944"(positive regulation of transcription by RNA polymerase II)|interpro:IPR004000(Actin/actin-like)|interpro:IPR043129|rcsb pdb:3WEE|rcsb pdb:4I6M|rcsb pdb:5TGC|rcsb pdb:6KW3|rcsb pdb:6KW4|rcsb pdb:6KW5|rcsb pdb:6TDA|rcsb pdb:6UXW|rcsb pdb:6V92|rcsb pdb:6VZ4|rcsb pdb:6VZG|rcsb pdb:7C4J|reactome:R-SCE-3214858 refseq:NP_015196.1|sgd:S000006050|ensemblfungi:YPL129W(gene)|ensemblfungi:YPL129W_mRNA(transcript)|go:"GO:0001111"(promoter clearance from RNA polymerase II promoter)|go:"GO:0001174"(transcriptional start site selection at RNA polymerase II promoter)|go:"GO:0005634"(nucleus)|go:"GO:0005669"(transcription factor TFIID complex)|go:"GO:0005674"(transcription factor TFIIF complex)|go:"GO:0006338"(chromatin remodeling)|go:"GO:0006355"(regulation of transcription, DNA-templated)|go:"GO:0006366"(transcription by RNA polymerase II)|go:"GO:0006367"(transcription initiation from RNA polymerase II promoter)|go:"GO:0006368"(transcription elongation from RNA polymerase II promoter)|go:"GO:0016251"(RNA polymerase II general transcription initiation factor activity)|go:"GO:0016514"(SWI/SNF complex)|go:"GO:0016573"(histone acetylation)|go:"GO:0016592"(mediator complex)|go:"GO:0031011"(Ino80 complex)|go:"GO:0033100"(NuA3 histone acetyltransferase complex)|go:"GO:0042766"(nucleosome mobilization)|go:"GO:0051123"(RNA polymerase II preinitiation complex assembly)|go:"GO:1990467"(NuA3a histone acetyltransferase complex)|go:"GO:1990468"(NuA3b histone acetyltransferase complex)|interpro:IPR005033(YEATS)|interpro:IPR016665(SAS complex, SAS5 subunit/transcription initiation factor IID, subunit 14)|interpro:IPR027353|interpro:IPR038704|rcsb pdb:2L7E|rcsb pdb:3QRL|rcsb pdb:5D7E|rcsb pdb:5IOK|rcsb pdb:5SVA|rcsb pdb:6LQZ|rcsb pdb:6MIN|rcsb pdb:6MIO|rcsb pdb:6MIP|rcsb pdb:6MIQ|reactome:R-SCE-674695|reactome:R-SCE-75955|dip:DIP-1147N|mint:P35189 go:"GO:0016514"(SWI/SNF complex) crc64:8E105921576FA213 crc64:60EA5EC2474B1B9C figure legend:3A|dataset:Chromatin - Epigenetic interactions resulting in chromatin modulation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/01/29 2014/10/16 rogid:6v4mZkPazGyh2qTqQGnivh6uHAc559292 rogid:vlV/9gdZlSdSF2uKWJM76rcCWUg559292 intact-crc:8E1704EABF6297DD|rigid:r3I+kdPDSBT2icFxYYXij39eT5c false - - - - psi-mi:"MI:0658"(multidimensional protein identification technology) psi-mi:"MI:0658"(multidimensional protein identification technology)