#ID(s) interactor A ID(s) interactor B Alt. ID(s) interactor A Alt. ID(s) interactor B Alias(es) interactor A Alias(es) interactor B Interaction detection method(s) Publication 1st author(s) Publication Identifier(s) Taxid interactor A Taxid interactor B Interaction type(s) Source database(s) Interaction identifier(s) Confidence value(s) Expansion method(s) Biological role(s) interactor A Biological role(s) interactor B Experimental role(s) interactor A Experimental role(s) interactor B Type(s) interactor A Type(s) interactor B Xref(s) interactor A Xref(s) interactor B Interaction Xref(s) Annotation(s) interactor A Annotation(s) interactor B Interaction annotation(s) Host organism(s) Interaction parameter(s) Creation date Update date Checksum(s) interactor A Checksum(s) interactor B Interaction Checksum(s) Negative Feature(s) interactor A Feature(s) interactor B Stoichiometry(s) interactor A Stoichiometry(s) interactor B Identification method participant A Identification method participant B uniprotkb:Q08387 uniprotkb:P53150 intact:EBI-5983|uniprotkb:Q02913|uniprotkb:Q02914|uniprotkb:D6W271|ensemblfungi:YOR005C intact:EBI-23865|uniprotkb:E9P953|uniprotkb:D6VU55|ensemblfungi:YGL090W psi-mi:dnli4_yeast(display_long)|uniprotkb:DNL4(gene name)|psi-mi:DNL4(display_short)|uniprotkb:LIG4(gene name synonym)|uniprotkb:YOR005C(locus name)|uniprotkb:UND407(orf name)|uniprotkb:UNE452(orf name)|uniprotkb:DNA ligase IV(gene name synonym)|uniprotkb:Polydeoxyribonucleotide synthase [ATP] 4(gene name synonym)|uniprotkb:DNA ligase II(gene name synonym) psi-mi:lif1_yeast(display_long)|uniprotkb:LIF1(gene name)|psi-mi:LIF1(display_short)|uniprotkb:YGL090W(locus name) psi-mi:"MI:0018"(two hybrid) Frank-Vaillant et al. (2001) pubmed:11711435|imex:IM-19770 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-1567355|imex:IM-19770-1 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_014647.1|sgd:S000005531|dip:DIP-5801N|ensemblfungi:YOR005C(gene)|ensemblfungi:YOR005C_mRNA(transcript)|go:"GO:0003677"(DNA binding)|go:"GO:0003910"("DNA ligase (ATP) activity")|go:"GO:0005524"(ATP binding)|go:"GO:0006260"(DNA replication)|go:"GO:0006297"(nucleotide-excision repair, DNA gap filling)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0006310"(DNA recombination)|go:"GO:0007049"(cell cycle)|go:"GO:0032807"(DNA ligase IV complex)|go:"GO:0046872"(metal ion binding)|go:"GO:0051103"(DNA ligation involved in DNA repair)|go:"GO:0051301"(cell division)|go:"GO:0071897"(DNA biosynthetic process)|interpro:IPR000977(ATP-dependent DNA ligase)|interpro:IPR001357(BRCT)|interpro:IPR012308(DNA ligase, N-terminal)|interpro:IPR012310(ATP dependent DNA ligase, central)|interpro:IPR012340(Nucleic acid-binding, OB-fold)|interpro:IPR016059(ATP-dependent DNA ligase, conserved site)|interpro:IPR029710|interpro:IPR036420|interpro:IPR036599|interpro:IPR044125|rcsb pdb:1Z56 refseq:NP_011425.1|sgd:S000003058|dip:DIP-5477N|mint:P53150|ensemblfungi:YGL090W(gene)|ensemblfungi:YGL090W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0032807"(DNA ligase IV complex)|interpro:IPR014751(DNA double-strand break repair and VJ recombination XRCC4, C-terminal)|interpro:IPR015381(XLF/Cernunnos)|rcsb pdb:1Z56 - crc64:7FB6D7927E1719B5 crc64:5BEDC72059E9996F figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/12/11 2014/10/16 rogid:me954YHdI1jTogBDLvYYlYpdIZw559292 rogid:IwFXSvAvdi5atkVDKt6aufYgKxw559292 intact-crc:B201B131593DF156|rigid:BCJXoSALvtA4VvVP3aBDhuj9rvs false sufficient binding region:812-944 - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q06148 uniprotkb:P53150 intact:EBI-34047|uniprotkb:Q0P6Z6|uniprotkb:Q0P6Z7|uniprotkb:Q0P707|uniprotkb:D6VYR3|ensemblfungi:YLR265C intact:EBI-23865|uniprotkb:E9P953|uniprotkb:D6VU55|ensemblfungi:YGL090W psi-mi:nej1_yeast(display_long)|uniprotkb:NEJ1(gene name)|psi-mi:NEJ1(display_short)|uniprotkb:LIF2(gene name synonym)|uniprotkb:YLR265C(locus name) psi-mi:lif1_yeast(display_long)|uniprotkb:LIF1(gene name)|psi-mi:LIF1(display_short)|uniprotkb:YGL090W(locus name) psi-mi:"MI:0018"(two hybrid) Frank-Vaillant et al. (2001) pubmed:11711435|imex:IM-19770 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-1567366|imex:IM-19770-2 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013367.1|sgd:S000004255|mint:Q06148|dip:DIP-4776N|ensemblfungi:YLR265C(gene)|ensemblfungi:YLR265C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032807"(DNA ligase IV complex)|go:"GO:0035825"(homologous recombination)|go:"GO:0045002"(double-strand break repair via single-strand annealing)|go:"GO:0045027"(DNA end binding)|go:"GO:0070419"(nonhomologous end joining complex)|interpro:IPR015381(XLF/Cernunnos) refseq:NP_011425.1|sgd:S000003058|dip:DIP-5477N|mint:P53150|ensemblfungi:YGL090W(gene)|ensemblfungi:YGL090W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0032807"(DNA ligase IV complex)|interpro:IPR014751(DNA double-strand break repair and VJ recombination XRCC4, C-terminal)|interpro:IPR015381(XLF/Cernunnos)|rcsb pdb:1Z56 - crc64:5E09B5F851CF03B9 crc64:5BEDC72059E9996F figure legend:Fig. 1A|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/12/11 2014/10/16 rogid:K7Q6t345H+Vo/mrcMIVSHonlQ7o559292 rogid:IwFXSvAvdi5atkVDKt6aufYgKxw559292 intact-crc:379F8BED8D4BED01|rigid:ZgHdni2tsOM8WzLmBUAFW1uD9RQ false sufficient binding region:254-342 - - - psi-mi:"MI:0078"(nucleotide sequence identification) psi-mi:"MI:0078"(nucleotide sequence identification) uniprotkb:Q06148 uniprotkb:P53150 intact:EBI-34047|uniprotkb:Q0P6Z6|uniprotkb:Q0P6Z7|uniprotkb:Q0P707|uniprotkb:D6VYR3|ensemblfungi:YLR265C intact:EBI-23865|uniprotkb:E9P953|uniprotkb:D6VU55|ensemblfungi:YGL090W psi-mi:nej1_yeast(display_long)|uniprotkb:NEJ1(gene name)|psi-mi:NEJ1(display_short)|uniprotkb:LIF2(gene name synonym)|uniprotkb:YLR265C(locus name) psi-mi:lif1_yeast(display_long)|uniprotkb:LIF1(gene name)|psi-mi:LIF1(display_short)|uniprotkb:YGL090W(locus name) psi-mi:"MI:0018"(two hybrid) Frank-Vaillant et al. (2001) pubmed:11711435|imex:IM-19770 taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) taxid:559292(yeast)|taxid:559292(Saccharomyces cerevisiae) psi-mi:"MI:0915"(physical association) psi-mi:"MI:0486"(UniProt) intact:EBI-1567379|imex:IM-19770-3 - - psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0499"(unspecified role) psi-mi:"MI:0498"(prey) psi-mi:"MI:0496"(bait) psi-mi:"MI:0326"(protein) psi-mi:"MI:0326"(protein) refseq:NP_013367.1|sgd:S000004255|mint:Q06148|dip:DIP-4776N|ensemblfungi:YLR265C(gene)|ensemblfungi:YLR265C_mRNA(transcript)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0016021"(integral component of membrane)|go:"GO:0031965"(nuclear membrane)|go:"GO:0032807"(DNA ligase IV complex)|go:"GO:0035825"(homologous recombination)|go:"GO:0045002"(double-strand break repair via single-strand annealing)|go:"GO:0045027"(DNA end binding)|go:"GO:0070419"(nonhomologous end joining complex)|interpro:IPR015381(XLF/Cernunnos) refseq:NP_011425.1|sgd:S000003058|dip:DIP-5477N|mint:P53150|ensemblfungi:YGL090W(gene)|ensemblfungi:YGL090W_mRNA(transcript)|go:"GO:0003682"(chromatin binding)|go:"GO:0005634"(nucleus)|go:"GO:0005737"(cytoplasm)|go:"GO:0006303"(double-strand break repair via nonhomologous end joining)|go:"GO:0032807"(DNA ligase IV complex)|interpro:IPR014751(DNA double-strand break repair and VJ recombination XRCC4, C-terminal)|interpro:IPR015381(XLF/Cernunnos)|rcsb pdb:1Z56 - crc64:5E09B5F851CF03B9 crc64:5BEDC72059E9996F figure legend:Fig. 1B|full coverage:Only protein-protein interactions|curation depth:imex curation taxid:4932(yeasx)|taxid:4932("Saccharomyces cerevisiae (Baker's yeast)") - 2007/12/11 2014/10/16 rogid:K7Q6t345H+Vo/mrcMIVSHonlQ7o559292 rogid:IwFXSvAvdi5atkVDKt6aufYgKxw559292 intact-crc:88AED35FA95F17AB|rigid:ZgHdni2tsOM8WzLmBUAFW1uD9RQ false sufficient binding region:170-342 - - - psi-mi:"MI:0396"(predetermined participant) psi-mi:"MI:0396"(predetermined participant)