_____ _____ _____ _ _______ _ | __ \ / ____|_ _| (_)__ __| | | | |__) | (___ | | _ __ ___ _ | | __ _| |__ | ___/ \___ \ | | | '_ ` _ \| | | |/ _` | '_ \ | | ____) |_| |_ | | | | | | | | | (_| | |_) | |_| |_____/|_____| |_| |_| |_|_| |_|\__,_|_.__/ IMPORTANT NOTICE ---------------- 2012-10-16: The files intact-clustered.txt and intact-clustered.zip are not generated in psimitab folder anymore. They have been replaced with intact-micluster.txt, intact-micluster_negative.txt, intact-micluster.zip. 2012-09-04: The current files intact-clustered.txt and intact-clustered.zip are now deprecated and will be soon entirely replaced with intact-micluster.txt and intact-micluster.zip. The current intact-clustered.txt file is based on MITAB 25 INTACT expanded format which is now deprecated. The new clustered mitab file will be based on MITAB 25 and will be a summary of all unique detection methods, publications, interaction types reported per unique binary pair in IntAct. If you have any questions about this change, please contact us on intact-help@ebi.ac.uk. 2009-08-27: From now on, each line of intact.txt will only refer to a single interaction evidence. In the past we used to aggregate all evidences for a given pair of molecules in a single line, it will now appears as multiple MITAB line. APIs such as intact-psimitab 2.1.0 and psimitab-parser 1.7.6 do reflect this change. The MITAB27 format is part of the PSI-MI standard [1]. The format is fully described at https://github.com/HUPO-PSI/miTab. It has been derived from the tabular format provided by BioGrid. MITAB27 only describes binary interactions, one pair of interactors per row. Columns are separated by tabulations. SOFTWARE -------- The PSI-MI workgroup has developed a parser for PSIMITAB, more information can be found on the PSI web site [2]. Should you need more information about it, contact us [3] REFERENCES ---------- [1] http://www.pubmedcentral.nih.gov/articlerender.fcgi?tool=pubmed&pubmedid=17925023 [2] http://www.psidev.info/index.php?q=node/60#tools [3] http://www.ebi.ac.uk/support/index.php?query=intact