MINT MINT, Dpt of Biology, University of Rome Tor Vergata MINT http://mint.bio.uniroma2.it/mint url>http://mint.bio.uniroma2.it/mint/ https://mint.bio.uniroma2.it MINT-[0-9]+ https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac} The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules. http://mint.bio.uniroma2.it Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 imex curation Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation mouse-cerebral_cortical_neuron Mouse cerebral cortical neuron brain-cortex_neuron Cerebral cortical neuron confocal microscopy confocal microscopy immunostaining immunostaining Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu Accepted 2021-FEB-04 AT 13:40 GMT AT 13:40 GMT by MGT The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 Only protein-protein interactions imex curation imex curation Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 imex curation Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation in vitro In vitro protein kinase assay protein kinase assay predetermined predetermined participant predetermined Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu Accepted 2021-FEB-04 AT 13:40 GMT AT 13:40 GMT by MGT The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 Only protein-protein interactions imex curation imex curation Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 imex curation Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation mouse-brain Mus musculus brain brain Brain [cerebrum] anti bait coip anti bait coimmunoprecipitation anti bait coip western blot western blot Immuno blot Immuno blot Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Parkinsons - Interactions investigated in the context of Parkinsons disease Thy1-α-Syn mice hzoghbi@bcm.edu Accepted 2021-FEB-04 AT 13:40 GMT AT 13:40 GMT by MGT The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 Only protein-protein interactions imex curation imex curation Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. Doublecortin-like Kinase 1 Regulates α-Synuclein Levels and Toxicity. The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 imex curation Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Neurodegeneration - Publications depicting interactions involved in neurodegenerative diseases. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu 29-Mar-2021: Contacted by IntAct-Help. Only protein-protein interactions imex curation human-293t Homo sapiens 293 cells transformed with SV40 large T antigen 293t 293 cells expressing SV40 large T antigen. The original designation of this cell line was 293tsA1609neo. It is not in Cabri,ATCC or HyperCLDB. anti bait coip anti bait coimmunoprecipitation anti bait coip anti tag western anti tag western blot anti tag western Vázquez-Vélez GE., Gonzales KA., Revelli JP., Adamski CJ., Alavi Naini F., Bajić A., Craigen E., Richman R., Heman-Ackah SM., Wood MJA., Rousseaux MWC., Zoghbi HY. Parkinsons - Interactions investigated in the context of Parkinsons disease hzoghbi@bcm.edu Accepted 2021-FEB-04 AT 13:40 GMT AT 13:40 GMT by MGT The Journal of neuroscience : the official journal of the Society for Neuroscience 2020 Only protein-protein interactions imex curation imex curation dclk1_human Serine/threonine-protein kinase DCLK1 DCAMKL1 DCDC3A KIAA0369 Doublecortin-like and CAM kinase-like 1 Doublecortin-like kinase 1 Doublecortin domain-containing protein 3A DCLK1 protein protein human Homo sapiens Human MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAVSSLATAKGSPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKSTSYTKIASSSRRSTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRSSQHGGSSTSLASTKVCSSMDENDGPGEEVSEEGFQIPATITERYKVGRTIGDGNFAVVKECVERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTNKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELITMMLLVDVDQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPNSTAAGVSVIATTALDKERQVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF D7B6D855099A315C syua_human Alpha-synuclein Non-A beta component of AD amyloid Non-A4 component of amyloid precursor SNCA NACP PARK1 protein protein human Homo sapiens Human MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVATVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGSIAAATGFVKKDQLGKNEEGAPQEGILEDMPVDPDNEAYEMPSEEGYQDYEPEA DIP protein P37840 original sequence version: 124 DIP protein P37840 original sequence version: 175 DIP protein P37840 original sequence version: 178 6BB2F12128931663 dclk1_mouse Serine/threonine-protein kinase DCLK1 Doublecortin-like and CAM kinase-like 1 Dclk1 Dclk Dcamkl1 Doublecortin-like kinase 1 protein protein mouse Mus musculus Mouse MSFGRDMELEHFDERDKAQRYSRGSRVNGLPSPTHSAHCSFYRTRTLQTLSSEKKAKKVRFYRNGDRYFKGIVYAISPDRFRSFEALLADLTRTLSDNVNLPQGVRTIYTIDGLKKISSLDQLVEGESYVCGSIEPFKKLEYTKNVNPNWSVNVKTTSASRAVSSLATAKGGPSEVRENKDFIRPKLVTIIRSGVKPRKAVRILLNKKTAHSFEQVLTDITDAIKLDSGVVKRLYTLDGKQVMCLQDFFGDDDIFIACGPEKFRYQDDFLLDESECRVVKSTSYTKIASASRRGTTKSPGPSRRSKSPASTSSVNGTPGSQLSTPRSGKSPSPSPTSPGSLRKQRISQHGGSSTSLSSTKVCSSMDENDGPGEGDELGRRHSLQRGWRREESEEGFQIPATITERYKVGRTIGDGNFAVVKECIERSTAREYALKIIKKSKCRGKEHMIQNEVSILRRVKHPNIVLLIEEMDVPTELYLVMELVKGGDLFDAITSTSKYTERDASGMLYNLASAIKYLHSLNIVHRDIKPENLLVYEHQDGSKSLKLGDFGLATIVDGPLYTVCGTPTYVAPEIIAETGYGLKVDIWAAGVITYILLCGFPPFRGSGDDQEVLFDQILMGQVDFPSPYWDNVSDSAKELINMMLLVNVDQRFSAVQVLEHPWVNDDGLPENEHQLSVAGKIKKHFNTGPKPSSTAAGVSVIATTALDKERQVFRRRRNQDVRSRYKAQPAPPELNSESEDYSPSSSETVRSPNSPF 3D1DBF18C23129F2 syua_mouse Alpha-synuclein Snca Syn Non-A beta component of AD amyloid Non-A4 component of amyloid precursor protein protein mouse Mus musculus Mouse MDVFMKGLSKAKEGVVAAAEKTKQGVAEAAGKTKEGVLYVGSKTKEGVVHGVTTVAEKTKEQVTNVGGAVVTGVTAVAQKTVEGAGNIAAATGFVKKDQMGKGEEGYPQEGILEDMPVDPGSEAYEMPSEEGYQDYEPEA 1FFD19D7E15E636C dclk1-snca-1 1 8 unspecified role unspecified role neutral component neutral component physiological level physiological level endogenous level endogenous endogenous endogenous level fixed cell fixed cell 7 unspecified role unspecified role neutral component neutral component physiological level physiological level endogenous level endogenous endogenous endogenous level fixed cell fixed cell colocalization colocalization f2a The same occurs in the substantia nigra compacta dclk1-1 3 8 unspecified role unspecified role prey prey physiological level physiological level endogenous level endogenous endogenous endogenous level phosphorylated serine opser O-phospho-L-serine (2S)-2-amino-3-(phosphonooxy)propanoic acid 2-amino-3-hydroxypropanoic acid 3-phosphate 2-azanyl-3-(phosphonooxy)propanoic acid ACT_SITE Phosphoserine intermediate MOD_RES Phosphoserine O-phospho-L-serine O-phosphonoserine O-phosphorylated L-serine O3-phosphoserine serine phosphate ester OPSer Phospho Phospho Seryl Phosphorylation phosphorylations certain certain sequence position certain certain certain sequence position certain observed-ptm observed-ptm observed ptm observed-ptm 7 unspecified role unspecified role bait bait physiological level physiological level endogenous level endogenous endogenous endogenous level physical association physical association f3b f6g Same interaction occurs in wt mouse brain dclk1-4 4 6 unspecified role unspecified role bait bait physiological level physiological level endogenous level endogenous endogenous endogenous level 5 unspecified role unspecified role prey prey over-expressed over expressed level over-expressed flag tag flag tag flag tag flag tag FLAG-tagged FLAG DYKDDDDKV epitope tag DYKDDDDKV epitope tag FLAG FLAG-tagged c-term range C-terminal range c-term range c-term range C-terminal range c-term range physical association physical association F3A dclk1-5 2 5 putative self putative self putative self putative self purified purified n-terminus gst tag glutathione s tranferase tag glutathione S-tranferase tag glutathione S-tranferase tag gst tag n-term range n-terminal range n-term range n-term range n-terminal range n-term range phosres phosres phosphorylated residue PhosRes Phospho Phosphorylation Phosphorylation (O of Serine, Threonine, Tyrosine and Aspartate, N epsilon of Lysine) undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined resulting-ptm resulting-ptm resulting ptm resulting-ptm spofr-sf_9 Spodoptera frugiperda insect cells Fall armyworm sf_9 insect cells Derived from pupal ovarian tissue of the fall armyworm Cloned from the parent cell line, IPLB-SF-21-AE (SF-21) derived from immature ovaries of fall armyworm Spodoptera frugiperda pupae cells are susceptible to Baculovirus infection phosphorylation phosphorylation reaction phosphorylation true 3C