DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions in vitro In vitro x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250206X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions in vitro In vitro molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250205X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250204X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250202X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions in vitro In vitro x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250208X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250203X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Structure of a complex of the ATPase SecA and the protein-translocation channel. Nature 2008 imex curation Zimmer J., Nam Y., Rapoport TA. Only protein-protein interactions in vitro In vitro molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Zimmer J., Nam Y., Rapoport TA. DIP original experiment: DIP-250207X Nature 2008 IMEx Structure of a complex of the ATPase SecA and the protein-translocation channel. sece_thema Protein translocase subunit SecE secE TM_0452 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MEKLRKFFREVIAEAKKISWPSRKELLTSFGVVLVILAVTSVYFFVLDFIFSGVVSAIFKALGIG A9EAC82A8E92947A A9EAC82A8E92947A a0a0f6ak20_thesq Protein-export membrane protein SecG TRQ2_0456 protein protein thesq thesq MKTFFLIVHTIISVALIYMVQVQMSKFSELGGAFGSGGLHTVFGRRKGLDTGGKITLVLSVLFFVSCVVTAFVLTR 6EF91F9D496F08B4 seca_thema Protein translocase subunit SecA secA TM_1578 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MILFDKNKRILKKYAKMVSKINQIESDLRSKKNSELIRLSMVLKEKVNSFEDADEHLFEAFALVREAARRTLGMRPFDVQVMGGIALHEGKVAEMKTGEGKTLAATMPIYLNALIGKGVHLVTVNDYLARRDALWMGPVYLFLGLRVGVINSLGKSYEVVWKNPDLARKAIEENWSVWPDGFNGEVLKEESMNKEAVEAFQVELKEITRKEAYLCDVTYGTNNEFGFDYLRDNLVLDYNDKVQRGHFYAIVDEADSVLIDEARTPLIISGPSKESPSVYRRFAQIAKKFVKDKDFTVDEKARTIILTEEGVAKAEKIIGVENLYDPGNVSLLYHLINALKALHLFKKDVDYVVMNGEVIIVDEFTGRLLPGRRYSGGLHQAIEAKEGVPIKEESITYATITFQNYFRMYEKLAGMTGTAKTEESEFVQVYGMEVVVIPTHKPMIRKDHDDLVFRTQKEKYEKIVEEIEKRYKKGQPVLVGTTSIEKSELLSSMLKKKGIPHQVLNAKYHEKEAEIVAKAGQKGMVTIATNMAGRGTDIKLGPGVAELGGLCIIGTERHESRRIDNQLRGRAGRQGDPGESIFFLSLEDDLLRIFGSEQIGKVMNILKIEEGQPIQHPMLSKLIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQILLEKDYDEYLKDIFEDVVSTRVEEFCSGKNWDIESLKNSLSFFPAGLFDLDEKQFSSSEELHDYLFNRLWEEYQRKKQEIGEDYRKVIRFLMLRIIDDHWRRYLEEVEHVKEAVQLRSYGQKDPIVEFKKETYYMFDEMMRRINDTIANYVLRVVKVSEKDEKEAKEELGKIRLVHEEFNLVNRAMRRATEKKKKKDGLHSFGRIRVKR 24F661A1799AC89C 24F661A1799AC89C sece_aquae Protein translocase subunit SecE secE aq_1930 protein protein aquae Aquifex aeolicus (strain VF5) MEKLKEFLKGVRDELKRVVWPSRELVVKATISVIIFSLAIGVYLWILDLTFTKIISFILSLRGSL 4571C9039CF613DF secg_aquae Protein-export membrane protein SecG secG aq_098 protein protein aquae Aquifex aeolicus (strain VF5) MYYALLTLFVIIAVVLIISTLLQKGRGDVGAAFGGGMGQSIFGVGGVETILTKATYWLGALFLVLALLLSVIPKEKGSVVEKSVQTEQSEGKGTTQESGK C7183A51B27FA21A seca_bacsu Protein translocase subunit SecA secA div+ BSU35300 protein protein bacsu Bacillus subtilis MLGILNKMFDPTKRTLNRYEKIANDIDAIRGDYENLSDDALKHKTIEFKERLEKGATTDDLLVEAFAVVREASRRVTGMFPFKVQLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQAAKSTKLYVQANAFVRTLKAEKDYTYDIKTKAVQLTEEGMTKAEKAFGIDNLFDVKHVALNHHINQALKAHVAMQKDVDYVVEDGQVVIVDSFTGRLMKGRRYSEGLHQAIEAKEGLEIQNESMTLATITFQNYFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVTIPTNRPVVRDDRPDLIYRTMEGKFKAVAEDVAQRYMTGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQKGAVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMEDELMRRFGAERTMAMLDRFGMDDSTPIQSKMVSRAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSENLREIVENMIKSSLERAIAAYTPREELPEEWKLDGLVDLINTTYLDEGALEKSDIFGKEPDEMLELIMDRIITKYNEKEEQFGKEQMREFEKVIVLRAVDSKWMDHIDAMDQLRQGIHLRAYAQTNPLREYQMEGFAMFEHMIESIEDEVAKFVMKAEIENNLEREEVVQGQTTAHQPQEGDDNKKAKKAPVRKVVDIGRNAPCHCGSGKKYKNCCGRTE 9AAC3630139F5EFF mint 9AAC3630139F5EFF secy_thema Protein translocase subunit SecY secY TM_1480 protein protein thema Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) MWQAFKNAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDVFTGGALSRFSVFTMSVTPYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMSMLAGTMFLLWLGERITEKGIGNGISILIFAGIVARYPSYIRQAYLGGLNLLEWIFLIAVALITIFGIILVQQAERRITIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASITNNETLKNLFRAGGFLYLLIYGLLVFFFTYFYSVVIFDPREISENIRKYGGYIPGLRPGRSTEQYLHRVLNRVTFIGAVFLVVIALLPYLVQGAIKVNVWIGGTSALIAVGVALDIIQQMETHMVMRHYEGFIKKGKIRGRR 0FFDBBAD1F8F0B61 0FFDBBAD1F8F0B61 secy_aquae Protein translocase subunit SecY secY aq_079 protein protein aquae Aquifex aeolicus (strain VF5) MSEYLKALFELKELRQKFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWFNIPFYFGGTTALIVVGVALDTFRQIETYLIQKKYKSYVRR 87D4FC133D037C25 aasece-aasecg-1 1 13 unspecified role unspecified role unspecified role unspecified role Region 2-780 Region 2-780 binding region binding-associated region binding region certain certain sequence position certain certain certain sequence position certain ecolx Escherichia coli 11 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 12 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 15 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association tmsece-tmsecy-1 4 8 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 14 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction tmseca-tmsece-1 5 9 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 10 unspecified role unspecified role unspecified role unspecified role Region 1-816 Region 1-816 binding region binding-associated region binding region certain certain sequence position certain certain certain sequence position certain ecolx Escherichia coli 8 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 14 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association aasece-aasecg-2 2 13 unspecified role unspecified role unspecified role unspecified role Region 2-780 Region 2-780 binding region binding-associated region binding region certain certain sequence position certain certain certain sequence position certain ecolx Escherichia coli 11 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 12 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 15 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association tmsece-tmsecg-1 6 9 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 8 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 14 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association bsseca-tmsece-1 7 13 unspecified role unspecified role unspecified role unspecified role Region 2-780 Region 2-780 binding region binding-associated region binding region certain certain sequence position certain certain certain sequence position certain ecolx Escherichia coli 8 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 14 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association aasece-aasecg-3 3 11 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 12 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli 15 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli physical association physical association