<?xml version='1.0' encoding='UTF-8'?>
<entrySet xmlns="http://psi.hupo.org/mi/mif300" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://psi.hupo.org/mi/mif300 https://raw.githubusercontent.com/HUPO-PSI/miXML/master/3.0/src/MIF300.xsd" level="3" version="0" minorVersion="0">
  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>DIP</shortLabel>
        <fullName>Database of Interacting Proteins</fullName>
      </names>
      <xref>
        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="identity" refTypeAc="MI:0356"/>
        <secondaryRef db="pubmed" dbAc="MI:0446" id="14681454" refType="identity" refTypeAc="MI:0356"/>
        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1579232" refType="identity" refTypeAc="MI:0356"/>
      </xref>
      <attributeList>
        <attribute name="postaladdress">611 Young Drive East; Los Angeles CA 90095; USA</attribute>
        <attribute name="url" nameAc="MI:0614">http://dip.doe-mbi.ucla.edu/</attribute>
        <attribute name="contact-email" nameAc="MI:0634">dip@mbi.ucla.edu</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Human immunodeficiency virus impairs reverse cholesterol transport from macrophages.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="17076584" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="doi" dbAc="MI:0574" id="10.1371/journal.pbio.0040365" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15608978" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="imex" dbAc="MI:0670" id="IM-8545" refType="imex-primary" refTypeAc="MI:0662"/>
          </xref>
          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Human immunodeficiency virus impairs reverse cholesterol transport from macrophages.</attribute>
            <attribute name="journal" nameAc="MI:0885">PLoS biology</attribute>
            <attribute name="publication year" nameAc="MI:0886">2006</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Mujawar Z.,  Rose H.,  Morrow MP.,  Pushkarsky T.,  Dubrovsky L.,  Mukhamedova N.,  Fu Y.,  Dart A.,  Orenstein JM.,  Bobryshev YV.,  Bukrinsky M.,  Sviridov D.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
          </attributeList>
        </bibref>
        <xref>
          <primaryRef db="imex" dbAc="MI:0670" id="IM-8545" refType="imex-primary" refTypeAc="MI:0662"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-66490X" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="pubmed" dbAc="MI:0446" id="17076584" refType="primary-reference" refTypeAc="MI:0358"/>
          <secondaryRef db="doi" dbAc="MI:0574" id="10.1371/journal.pbio.0040365" refType="primary-reference" refTypeAc="MI:0358"/>
        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="9606">
            <names>
              <shortLabel>human</shortLabel>
              <fullName>Homo sapiens</fullName>
              <alias type="synonym" typeAc="MI:1041">Human</alias>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>anti tag coip</shortLabel>
            <fullName>anti tag coimmunoprecipitation</fullName>
            <alias type="synonym" typeAc="MI:1041">anti tag coip</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0007" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-90" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="7708014" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>western blot</shortLabel>
            <fullName>western blot</fullName>
            <alias type="go synonym" typeAc="MI:0303">Immuno blot</alias>
            <alias type="synonym" typeAc="MI:1041">Immuno blot</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0113" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-973" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Mujawar Z., Rose H., Morrow MP., Pushkarsky T., Dubrovsky L., Mukhamedova N., Fu Y., Dart A., Orenstein JM., Bobryshev YV., Bukrinsky M., Sviridov D.</attribute>
          <attribute name="comment" nameAc="MI:0612">DIP original experiment: DIP-66490X</attribute>
          <attribute name="journal" nameAc="MI:0885">PLoS biology</attribute>
          <attribute name="publication year" nameAc="MI:0886">2006</attribute>
          <attribute name="curation depth" nameAc="MI:0955">IMEx</attribute>
          <attribute name="title" nameAc="MI:1091">Human immunodeficiency virus impairs reverse cholesterol transport from macrophages.</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>abca1_human</shortLabel>
          <fullName>Phospholipid-transporting ATPase ABCA1</fullName>
          <alias type="gene name synonym" typeAc="MI:0302">ATP-binding cassette transporter 1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Cholesterol efflux regulatory protein</alias>
          <alias type="gene name" typeAc="MI:0301">ABCA1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">ABC1</alias>
          <alias type="gene name synonym" typeAc="MI:0302">CERP</alias>
          <alias type="gene name synonym" typeAc="MI:0302">ATP-binding cassette sub-family A member 1</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="O95477" version="SP_81" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q96S56" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q96T85" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9NQV4" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9UN06" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9UN07" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9UN08" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q9UN09" version="SP_81" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q5VX33" version="SP_98" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="ensembl" dbAc="MI:0476" id="ENSP00000363868" version="SP_221" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-784112" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_005493.2"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-29211N"/>
          <secondaryRef db="ensembl" dbAc="MI:0476" id="ENSG00000165029" version="SP_221" refType="gene"/>
          <secondaryRef db="ensembl" dbAc="MI:0476" id="ENST00000374736" version="SP_221" refType="transcript"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0002790" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005102" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005319" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005524" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005548" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005768" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005789" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005794" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005886" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005887" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006497" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006869" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006911" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0007040" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0007186" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0007189" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0007584" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008035" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008203" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008320" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0009306" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0009897" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0010745" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0010875" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0010887" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0015485" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0016197" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0016323" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0019905" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0023061" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0030139" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0031210" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0031267" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0032367" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0032489" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0033344" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0033700" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0034185" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0034186" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0034188" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0034380" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0034616" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0035690" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042626" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042632" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0043231" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0043691" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0045121" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0045332" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0045335" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0046623" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0048471" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0051117" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0055091" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0060155" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071222" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071300" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071345" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071397" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071404" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0071806" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0090107" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0090108" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0090554" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0090556" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0097708" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0120020" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0140115" version="SP_221"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0140328" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003439" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003593" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR017871" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR026082" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR027417" version="SP_221"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR030365" version="SP_221"/>
          <secondaryRef db="mint" dbAc="MI:0471" id="O95477" version="SP_221"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5XJY" version="SP_221"/>
          <secondaryRef db="reactome" dbAc="MI:0467" id="R-HSA-1989781" version="SP_221"/>
          <secondaryRef db="reactome" dbAc="MI:0467" id="R-HSA-5682113" version="SP_221"/>
          <secondaryRef db="reactome" dbAc="MI:0467" id="R-HSA-8963896" version="SP_221"/>
          <secondaryRef db="reactome" dbAc="MI:0467" id="R-HSA-9029569" version="SP_221"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="9606">
          <names>
            <shortLabel>human</shortLabel>
            <fullName>Homo sapiens</fullName>
            <alias type="synonym" typeAc="MI:1041">Human</alias>
          </names>
        </organism>
        <sequence>MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKAMPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVARLFSDARRLLLYSQKDTSMKDMRKVLRTLQQIKKSSSNLKLQDFLVDNETFSGFLYHNLSLPKSTVDKMLRADVILHKVFLQGYQLHLTSLCNGSKSEEMIQLGDQEVSELCGLPREKLAAAERVLRSNMDILKPILRTLNSTSPFPSKELAEATKTLLHSLGTLAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAETFYDNSTTPYCNDLMKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELSPKIWTFMENSQEMDLVRMLLDSRDNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSNGSVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVWLINKSMELLDERKFWAGIVFTGITPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDTFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRISEICMEEEPTHLKLGVSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDIDPESRETDLLSGMDGKGSYQVKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDTGTLELLNALTKDPGFGTRCMEGNPIPDTPCQAGEEEWTTAPVPQTIMDLFQNGNWTMQNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQDLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNTQALPPSQEVNDAIKQMKKHLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVNAKLSPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDFFGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein O95477 original sequence version: 70</attribute>
          <attribute name="remark-internal">DIP protein O95477 original sequence version: 169</attribute>
          <attribute name="crc64">21A2CF8F3F518D6D</attribute>
        </attributeList>
      </interactor>
      <interactor id="3">
        <names>
          <shortLabel>nef_hv1a2</shortLabel>
          <fullName>Protein Nef</fullName>
          <alias type="gene name" typeAc="MI:0301">nef</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Negative factor</alias>
          <alias type="gene name synonym" typeAc="MI:0302">3'ORF</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="P03407" version="SP_70" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="MINT-1206762" refType="intact-secondary"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-7355020" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005525" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005576" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0007171" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0016020" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0017124" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0020002" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0039504" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0039505" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0039521" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0044178" version="SP_160"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0046776" version="SP_160"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR001558" version="SP_160"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR027480" version="SP_160"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR027481" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3RBB" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3REA" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3REB" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4ORZ" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4U1K" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4U1L" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4U1M" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4U1N" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4U5W" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5XOV" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="6B72" version="SP_160"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="7D7S" version="SP_160"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-29212N"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="11685">
          <names>
            <shortLabel>hv1a2</shortLabel>
            <fullName>Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2)</fullName>
          </names>
        </organism>
        <sequence>MGGKWSKRSMGGWSAIRERMRRAEPRAEPAADGVGAVSRDLEKHGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAALDISHFLKEKGGLEGLIWSQRRQEILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKVEEANEGENNSLLHPMSLHGMEDAEKEVLVWRFDSKLAFHHMARELHPEYYKDC</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein P03407 original sequence version: 118</attribute>
          <attribute name="remark-internal">DIP protein P03407 original sequence version: 59</attribute>
          <attribute name="remark-internal">DIP protein P03407 original sequence version: 110</attribute>
          <attribute name="remark-internal">DIP protein P03407 original sequence version: 103</attribute>
          <attribute name="function" nameAc="MI:0613">Down-modulates surface MHC-I molecules. Internalized molecules are sequestred to the trans-Golgi network (TGN). Also decreases cell surface CD4 antigen by interacting with the Src family kinase LCK thereby inducing LCK-CD4 dissociation and by increasing clathrin-dependent endocytosis of this antigen to target it to lysosomal degradation. Peroxisomal acyl-coenzyme A thioester hydrolase 1 (PTE1) seems to be involved in this process. May serve as a direct bridge between CD4 and the cellular endocytic machinery by interacting with beta-COP and adaptins. In consequence, surface MHC-I and CD4 are decreased and infected cells are masked for immune recognition by cytotoxic T lymphocytes. Decreasing the number of viral receptors prevents reinfection by more HIV particles</attribute>
          <attribute name="function" nameAc="MI:0613">Bypasses host T-cell signaling by inducing a transcriptional program nearly identical to that of anti-CD3 cell activation. Interacts with the TCR-zeta chain to up-regulate the Fas ligand (FasL). Increasing surface FasL molecules and decreasing surface MHC-I molecules send attacking cytotoxic T-cell into apoptosis</attribute>
          <attribute name="function" nameAc="MI:0613">Protects the infected cell from apoptosis in order to keep it alive until the next virus generation is ready to strike. Inhibits the Fas and TNFR-mediated death signals by blocking MAP3K5. Interacts with p53 and decreases the half-life of the latter, protecting the infected cell against p53-mediated apoptosis. Inhibits the apoptotic signals regulated by the Bcl-2 family proteins through the formation of a Nef/PI3-kinase/PAK2 complex that induces phosphorylation of Bad</attribute>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="comment" nameAc="MI:0612">homomint</attribute>
          <attribute name="function" nameAc="MI:0613">Early protein that seems to play a role in optimizing the host cell environment for viral replication without causing cell death by apoptosis. Enhances virus infectivity and pathogenicity</attribute>
          <attribute name="crc64">ED255233F8A17DAB</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="4" imexId="IM-8545-1">
        <names>
          <shortLabel>abca1-nef-1</shortLabel>
        </names>
        <xref>
          <primaryRef db="dip" dbAc="MI:0465" id="DIP-57228E" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-15608997" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="psi-mi" dbAc="MI:0488" id="MI:0465" refType="imex source"/>
          <secondaryRef db="imex" dbAc="MI:0670" id="IM-8545-1" refType="imex-primary" refTypeAc="MI:0662"/>
        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="5">
            <interactorRef>3</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>prey</shortLabel>
                  <fullName>prey</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0498" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-58" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="9606">
                <names>
                  <shortLabel>human</shortLabel>
                  <fullName>Homo sapiens</fullName>
                  <alias type="synonym" typeAc="MI:1041">Human</alias>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
          <participant id="6">
            <interactorRef>2</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>bait</shortLabel>
                  <fullName>bait</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0496" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-49" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <featureList>
              <feature id="7">
                <names>
                  <shortLabel>Flag-tag</shortLabel>
                  <fullName>Flag-tag</fullName>
                </names>
                <xref>
                  <primaryRef db="intact" dbAc="MI:0469" id="EBI-15609002" refType="identity" refTypeAc="MI:0356"/>
                </xref>
                <featureType>
                  <names>
                    <shortLabel>flag tag</shortLabel>
                    <fullName>flag tag</fullName>
                    <alias type="go synonym" typeAc="MI:0303">FLAG-tagged</alias>
                    <alias type="go synonym" typeAc="MI:0303">FLAG</alias>
                    <alias type="go synonym" typeAc="MI:0303">DYKDDDDKV epitope tag</alias>
                    <alias type="synonym" typeAc="MI:1041">DYKDDDDKV epitope tag</alias>
                    <alias type="synonym" typeAc="MI:1041">FLAG</alias>
                    <alias type="synonym" typeAc="MI:1041">FLAG-tagged</alias>
                  </names>
                  <xref>
                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0518" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="intact" dbAc="MI:0469" id="EBI-456503" refType="identity" refTypeAc="MI:0356"/>
                    <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                  </xref>
                </featureType>
                <featureRangeList>
                  <featureRange>
                    <startStatus>
                      <names>
                        <shortLabel>c-term range</shortLabel>
                        <fullName>C-terminal range</fullName>
                        <alias type="synonym" typeAc="MI:1041">c-term range</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:1039" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-2929799" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14760721" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </startStatus>
                    <endStatus>
                      <names>
                        <shortLabel>c-term range</shortLabel>
                        <fullName>C-terminal range</fullName>
                        <alias type="synonym" typeAc="MI:1041">c-term range</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:1039" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-2929799" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14760721" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </endStatus>
                  </featureRange>
                </featureRangeList>
              </feature>
            </featureList>
            <hostOrganismList>
              <hostOrganism ncbiTaxId="9606">
                <names>
                  <shortLabel>human</shortLabel>
                  <fullName>Homo sapiens</fullName>
                  <alias type="synonym" typeAc="MI:1041">Human</alias>
                </names>
              </hostOrganism>
            </hostOrganismList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-608833" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
      </interaction>
    </interactionList>
  </entry>
</entrySet>