DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu A Mediator-responsive form of metazoan RNA polymerase II. A Mediator-responsive form of metazoan RNA polymerase II. Proceedings of the National Academy of Sciences of the United States of America 2006 imex curation Hu X., Malik S., Negroiu CC., Hubbard K., Velalar CN., Hampton B., Grosu D., Catalano J., Roeder RG., Gnatt A. Only protein-protein interactions bovin Bos taurus (Bovine) Bovine anti bait coip anti bait coimmunoprecipitation anti bait coip ms participant Identification by mass spectrometry ms participant Hu X., Malik S., Negroiu CC., Hubbard K., Velalar CN., Hampton B., Grosu D., Catalano J., Roeder RG., Gnatt A. DIP original experiment: DIP-263193X Proceedings of the National Academy of Sciences of the United States of America 2006 IMEx A Mediator-responsive form of metazoan RNA polymerase II. rpab4_bovin DNA-directed RNA polymerases I, II, and III subunit RPABC4 POLR2K DNA-directed RNA polymerase II subunit K protein protein bovin Bos taurus (Bovine) Bovine MDTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR DIP protein Q3ZBC0 original sequence version: 68 DIP protein Q3ZBC0 original sequence version: 78 rpb9_bovin DNA-directed RNA polymerase II subunit RPB9 POLR2I DNA-directed RNA polymerase II subunit I protein protein bovin Bos taurus (Bovine) Bovine MEPDGTYEPGIVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITHEVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCGHRWTE DIP protein Q32P73 original sequence version: 66 DIP protein Q32P73 original sequence version: 75 q1jq91_bovin POLR2D protein protein bovin Bos taurus (Bovine) Bovine MAAGGSDPRSGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEGRFEDEELQQILDDIQTKRSFQY DIP protein Q1JQ91 original sequence version: 63 DIP protein Q1JQ91 original sequence version: 72 rpab1_bovin DNA-directed RNA polymerases I, II, and III subunit RPABC1 POLR2E DNA-directed RNA polymerase II subunit E RPB5 homolog protein protein bovin Bos taurus (Bovine) Bovine MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDGLDQTLEEFKAQFGGKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETAGRYITYRLVQ DIP protein Q2T9T3 original sequence version: 57 DIP protein Q2T9T3 original sequence version: 64 a5pjw8_bovin DNA-directed RNA polymerase subunit beta POLR2B protein protein bovin Bos taurus (Bovine) Bovine MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELEGTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV DIP protein A5PJW8 original sequence version: 62 DIP protein A5PJW8 original sequence version: 74 g3mzy8_bovin DNA-directed RNA polymerase subunit POLR2A protein protein bovin Bos taurus (Bovine) Bovine MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVDSNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKGHGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEPRYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAHVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDEN DIP protein G3MZY8 original sequence version: 20 DIP protein G3MZY8 original sequence version: 32 6876FD95692A657E grl1a_bovin DNA-directed RNA polymerase II subunit GRINL1A POLR2M GRINL1A DNA-directed RNA polymerase II subunit M GRINL1A downstream protein 1 Glutamate receptor-like protein 1A protein protein bovin Bos taurus (Bovine) Bovine MSSLPRGFEPQTPEDLGQRSLAELREMLKRQERLLRNVKFICKLPDKGKKISDAVTKLKAAIAEREEVRGRSELFYPVSLDCKERQKAIAVVDGDRDKAQNSDQILDTSSPVPGCSSVANITSSQTTSRQQGLAHPTRGGDAEAAEAEHTVSEHPTSSSGAPAPSSSQASEGLPQHCALGQVEDHPGSSDNLFIDRLQRITIADPTEHHSEGNRNPENLAGLWSGPQKKPHYMEVLEMRAKNPMPPPHKFKTNVLPSQPRDSSSACQRRGSPISSEERRRRDRKHLDDITAARLLPLHHLPTQLLSIEESLALQRQQKQSYEEIQAKLAAQKLAERLNIKMQSYNPEGESSRKYREVRDEDDDQSSEDEF DIP protein Q17QE3 original sequence version: 49 rpab5_bovin DNA-directed RNA polymerases I, II, and III subunit RPABC5 POLR2L DNA-directed RNA polymerase III subunit L protein protein bovin Bos taurus (Bovine) Bovine MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLLNYAPLEK DIP protein Q32P78 original sequence version: 75 DIP protein Q32P78 original sequence version: 84 rpab2_bovin DNA-directed RNA polymerases I, II, and III subunit RPABC2 POLR2F DNA-directed RNA polymerase II subunit F RPB6 homolog protein protein bovin Bos taurus (Bovine) Bovine MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQVNVEILPSGERPQANQKRITTPYMTKYERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGVDELIITD DIP protein Q32PE0 original sequence version: 63 DIP protein Q32PE0 original sequence version: 69 rpb3_bovin DNA-directed RNA polymerase II subunit RPB3 POLR2C DNA-directed RNA polymerase II subunit C protein protein bovin Bos taurus (Bovine) Bovine MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN DIP protein Q3T0Q3 original sequence version: 71 DIP protein Q3T0Q3 original sequence version: 81 f2z4h3_bovin DNA-directed RNA polymerases I, II, and III subunit RPABC3 POLR2H protein protein bovin Bos taurus (Bovine) Bovine MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLLMKKLAF DIP protein F2Z4H3 original sequence version: 29 DIP protein F2Z4H3 original sequence version: 39 rpb7_bovin DNA-directed RNA polymerase II subunit RPB7 POLR2G DNA-directed RNA polymerase II subunit G protein protein bovin Bos taurus (Bovine) Bovine MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS DIP protein Q5E9B8 original sequence version: 66 DIP protein Q5E9B8 original sequence version: 76 rpb11_bovin DNA-directed RNA polymerase II subunit RPB11 POLR2J DNA-directed RNA polymerase II subunit J protein protein bovin Bos taurus (Bovine) Bovine MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE DIP protein Q32P79 original sequence version: 67 DIP protein Q32P79 original sequence version: 75 polr2a-polr2b-1 1 2 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 14 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 9 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 3 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 12 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 13 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 10 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 5 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 4 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 6 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 7 unspecified role unspecified role bait bait bovin Bos taurus (Bovine) Bovine 11 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine 8 unspecified role unspecified role prey prey bovin Bos taurus (Bovine) Bovine association association