IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ A computational screen for methylation guide snoRNAs in yeast. A computational screen for methylation guide snoRNAs in yeast. Science (New York, N.Y.) 1999 imex curation Lowe TM., Eddy SR. lowe@genetics.wustl.edu 15-Sep-2016: Contacted by IntAct-Help. Only protein-protein interactions imex curation yeast Saccharomyces cerevisiae Baker's yeast chemical rna modification plus base pairing prediction chemical rna modification plus base pairing prediction chemical rna modification plus base pairing prediction primer extension assay primer extension assay primer extension assay Lowe TM., Eddy SR. Primer extension assay was performed using low dNTP concentration to detect methylation. LSU indicates the ribosomal 25S RNA, While SSU indicates the ribosomal 18S RNA lowe@genetics.wustl.edu Accepted 2016-AUG-19 AT 08:02 BST AT 08:02 BST by MGT Science (New York, N.Y.) 1999 imex curation LSU is the ribosomal 25S (Large Subunit) and SSU is the ribosomal 18S (Small subunit). It is not obvious infact (but it is used in literature) so I have added a comment. I have added only the sites verified in this paper, which are those with black dot in the second column of the figure and they are 41. Do you think I should add also those predicted but not verified? snr60 yeast-1 small nuclear RNA 60 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UGUUAAUGAUGAUAACCAAAGAUGCAUAGUUCAACUGAUUGAACAUACUAUCGAAAUGAAGAUAAAAAUUUCCAUCGAAAUUAGUCUUUCGCUCCUAUCUGAAC snr40 yeast small nucleolar RNA 40 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUAAAUGACGAGAAAAAAGCUGUGCACCAGUCUGAACAUGGAUGCCACAAGUACUCAGGUGUCCUAUGAAGCAUUAAGUAUACCCAAAUUUCUGAUC snr76 yeast small nuclear RNA 76 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AAUGGAAAUGAGGAUCCACAGCACUGGGCACUGAGGGGGAAACAAAUAUCCUUUCAAAUGAGUGACAAUGCUUUAGCGGGCCUAGAAAACCCGCGCAACUGAUCCAUUG snr41 yeast small nuclear RNA 41 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UCCCCUAUGAUUAAAAAUUAUUAAUCAUAUACCAAUUGUUCCGACUGAAUAGUGGUUUAACUACAUGUCGACAACCCUUUUUCGUUAAGUUUCAG snr65 yeast small nuclear RNA 65 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAAAAUGAUGAUUUUUUUAAACACAAUUUAUGCUAGAUAGUAUCUGAAAGCAUUCAAACUUUAUGAUUACAGUGUUUUCGACAGUUUUAAAUCUCUGAAC snr50 yeast small nuclear RNA 50 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAGAAUGAUGAAAGAGGUAGCAAUUUGCAGCAGAUUUUUCGUGAUUGAAUCAAACAAAGAUUAACCUUUACAGAACCGCUACACUGAUA snr56 yeast small nuclear RNA 56 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAACAUGAUGAAAAAAUAUAUUAACACAGACCUGUACUGAACUUUUCGAAGUUUUGCAGAUAACAAUAUUGCUUUUUUUCUCUGACU snr67 yeast-1 small nucleolar RNA 67 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAACAUGAUGACUAAGUUGUCGCCCCAAGCGGAUCUUUGAAAUGACUGAUUUUACAAACAACAAACACUGAAAAUUCUGAAA snr53 yeast small nuclear RNA 52 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUUGAUGAUGAUUACACUCCAUGCUAAUCAUGAACGUGUUCGAUGUAAAUUUGAAUACGAUGAUUAAAAUUGUUGUUUACGCUUUCUGAAA snr73 yeast small nucleolar RNA 73 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUUUAUGAUGAUUUCCACAUUUCACGACGGUCAACUGCGUUUUUCGAAUGUUUAUCGAUUAACUUUGAUGAUAUUUCGCCUGUGACAGGGCGUGGUACUGAGCUUU snr52 yeast small nucleolar RNA 52 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UACUAUGAUGAAUGACAUUAGCGUGAACAAUCUCUGAUACAAAAUCGAAAGAUUUUAGGAUUAGAAAAACUUAUGUUGCCUUCCUUCUGAAA snr64 yeast small nuclear RNA 64 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUGUAUGAUGAGGAACCAGAUAGGGACAACAGAUUCUCAAGUGACGAGGAACAUCUUUUAAAGCCCAGUUUUUAGUAGAGCUUAGGGCGCCUUUACUGACU snr63 yeast small nuclear RNA 63 yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUUAAUGAUGAAGAUUUUAAUUUUCCGUUGGUCUAUUAAGAACAGAAGUACUUCAAAACUACUUUUUAAGACCAUCCUUUUACAGUAUUUUUUCAAUAUUGUAAAACUUCUCAUUUACUUUGUGUCUUUAUGAUCUCAUCGUUCUGGUGGACCAUAAUCAGACGCACGGUAUACUUCGUUUCUGUUGGAGAAUAUUGGGAGUCUUUUAAUGUGAUGAGUGGCCAACAUAACCUUAUAGUCAUAGUUACACUGAUU snr58 yeast small nuclear RNA 58 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast CUUUAUGAUGAUAUUCUUUACGAACUUUUAGACGUUAGACUUCUGAAGGAGAUUAGACCCUCCUAUGGAAGAGAAACUCGUUAAACUUAUCUGAGU snr79 yeast small nucleolar RNA 79 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAAUGAUGAUAGCAUGAUUUAUGUUGCUCGAAGUUAAUCGAUGUGAGCACAAUGAUUUCUCAAGACUACAACGGUAUCUGAAU snr47 yeast small nucleolar RNA 47 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUAUAUGAUGAUAUCCUAUAACAACAACAACAUGAAUUUCUUCGUCCGAAUCCUUUAUAGGUGGAAACAAACUUUGACAAUAGCUUUUUAACACUGAUA snr61 yeast small nucleolar RNA 61 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast CUACAAUGAUGAUAAAAUUUACUAUUCAGUUCUGCUUCUGAACCAAAAUAAUAGGAAGAUAACCAAUUUUACCAAAGCUCAAAUCUGAUU snr51 yeast small nuclear RNA 51 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAUUAUGAUGAUUUUUUUAUAUUCACACUGUACUAGAUUGGUCUCUUUAACGAAGGGGCUAAUUGAUGACUACAAAAUAAAAAAUAACUGAUUUAAUGACUCUGAAA rrna 25s yeast Ribosomal RNA 25S Yeast rrna ribosomal rna rRNA rrna yeast Saccharomyces cerevisiae Baker's yeast GUUUGACCUCAAAUCAGGUAGGAGUACCCGCUGAACUUAAGCAUAUCAAUAAGCGGAGGAAAAGAAACCAACCGGGAUUGCCUUAGUAACGGCGAGUGAAGCGGCAAAAGCUCAAAUUUGAAAUCUGGUACCUUCGGUGCCCGAGUUGUAAUUUGGAGAGGGCAACUUUGGGGCCGUUCCUUGUCUAUGUUCCUUGGAACAGGACGUCAUAGAGGGUGAGAAUCCCGUGUGGCGAGGAGUGCGGUUCUUUGUAAAGUGCCUUCGAAGAGUCGAGUUGUUUGGGAAUGCAGCUCUAAGUGGGUGGUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAGAGACCGAUAGCGAACAAGUACAGUGAUGGAAAGAUGAAAAGAACUUUGAAAAGAGAGUGAAAAAGUACGUGAAAUUGUUGAAAGGGAAGGGCAUUUGAUCAGACAUGGUGUUUUGUGCCCUCUGCUCCUUGUGGGUAGGGGAAUCUCGCAUUUCACUGGGCCAGCAUCAGUUUUGGUGGCAGGAUAAAUCCAUAGGAAUGUAGCUUGCCUCGGUAAGUAUUAUAGCCUGUGGGAAUACUGCCAGCUGGGACUGAGGACUGCGACGUAAGUCAAGGAUGCUGGCAUAAUGGUUAUAUGCCGCCCGUCUUGAAACACGGACCAAGGAGUCUAACGUCUAUGCGAGUGUUUGGGUGUAAAACCCAUACGCGUAAUGAAAGUGAACGUAGGUUGGGGCCUCGCAAGAGGUGCACAAUCGACCGAUCCUGAUGUCUUCGGAUGGAUUUGAGUAAGAGCAUAGCUGUUGGGACCCGAAAGAUGGUGAACUAUGCCUGAAUAGGGUGAAGCCAGAGGAAACUCUGGUGGAGGCUCGUAGCGGUUCUGACGUGCAAAUCGAUCGUCGAAUUUGGGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCUGCCGAAGUUUCCCUCAGGAUAGCAGAAGCUCGUAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGAGGUUCCGGGGUCGAAAUGACCUUGACCUAUUCUCAAACUUUAAAUAUGUAAGAAGUCCUUGUUACUUAAUUGAACGUGGACAUUUGAAUGAAGAGCUUUUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGCGGGAUGAACCGAACGUAGAGUUAAGGUGCCGGAAUACACGCUCAUCAGACACCACAAAAGGUGUUAGUUCAUCUAGACAGCCGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGAGUGUGUAACAACUCACCGGCCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUCAAGCGUGUUACCUAUACUCUACCGUCAGGGUUGAUAUGAUGCCCUGACGAGUAGGCAGGCGUGGAGGUCAGUGACGAAGCCUAGACCGUAAGGUCGGGUCGAACGGCCUCUAGUGCAGAUCUUGGUGGUAGUAGCAAAUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGGGAAAGGUUCCACGUCAACAGCAGUUGGACGUGGGUUAGUCGAUCCUAAGAGAUGGGGAAGCUCCGUUUCAAAGGCCUGAUUUUAUGCAGGCCACCAUCGAAAGGGAAUCCGGUUAAGAUUCCGGAACCUGGAUAUGGAUUCUUCACGGUAACGUAACUGAAUGUGGAGACGUCGGCGCGAGCCCUGGGAGGAGUUAUCUUUUCUUCUUAACAGCUUAUCACCCCGGAAUUGGUUUAUCCGGAGAUGGGGUCUUAUGGCUGGAAGAGGCCAGCACCUUUGCUGGCUCCGGUGCGCUUGUGACGGCCCGUGAAAAUCCACAGGAAGGAAUAGUUUUCAUGCCAGGUCGUACUGAUAACCGCAGCAGGUCUCCAAGGUGAACAGCCUCUAGUUGAUAGAAUAAUGUAGAUAAGGGAAGUCGGCAAAAUAGAUCCGUAACUUCGGGAUAAGGAUUGGCUCUAAGGGUCGGGUAGUGAGGGCCUUGGUCAGACGCAGCGGGCGUGCUUGUGGACUGCUUGGUGGGGCUUGCUCUGCUAGGCGGACUACUUGCGUGCCUUGUUGUAGACGGCCUUGGUAGGUCUCUUGUAGACCGUCGCUUGCUACAAUUAACGAUCAACUUAGAACUGGUACGGACAAGGGGAAUCUGACUGUCUAAUUAAAACAUAGCAUUGCGAUGGUCAGAAAGUGAUGUUGACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCUAUCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGAAUAAGUGGGAGCUUCGGCGCCAGUGAAAUACCACUACCUUUAUAGUUUCUUUACUUAUUCAAUGAAGCGGAGCUGGAAUUCAUUUUCCACGUUCUAGCAUUCAAGGUCCCAUUCGGGGCUGAUCCGGGUUGAAGACAUUGUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUCUGUUAAACGAUAACGCAGAUGUCCUAAGGGGGGCUCAUGGAGAACAGAAAUCUCCAGUAGAACAAAAGGGUAAAAGCCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAACCAUGAAAGUGUGGCCUAUCGAUCCUUUAGUCCCUCGGAAUUUGAGGCUAGAGGUGCCAGAAAAGUUACCACAGGGAUAACUGGCUUGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCUCUUCCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAUGUUACCGCAAUAGUAAUUGAACUUAGUACGAGAGGAACAGUUCAUUCGGAUAAUUGGUUUUUGCGGCUGUCUGAUCAGGCAUUGCCGCGAAGCUACCAUCCGCUGGAUUAUGGCUGAACGCCUCUAAGUCAGAAUCCAUGCUAGAACGCGGUGAUUUCUUUGCUCCACACAAUAUAGAUGGAUACGAAUAAGGCGUCCUUGUGGCGUCGCUGAACCAUAGCAGGCUAGCAACGGUGCACUUGGCGGAAAGGCCUUGGGUGCUUGCUGGCGAAUUGCAAUGUCAUUUUGCGUGGGGAUAAAUCAUUUGUAUACGACUUAGAUGUACAACGGGGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUUACGAUCUGCUGAGAUUAAGCCUUUGUUGUCUGAUUUGU snr39b yeast small nuclear RNA 39B Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUUUAGUGAUGAUACUGCCGAUUCUGGCAUUCCAAAAAGUGACUAGCAAAAUUGCGAUGUUGUCAACUUAAAUUACACCAUCUUUCGGGGCUGAUA snr54 yeast small nuclear RNA 54 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAAGAUGAUGAUCAACUUUUUAUAUCAAUAACUUUCGUUCUACUGACUGUGAUCAAACGAUCUUGUAGAGAACUUUUACUCUGAAU snr57 yeast small nuclear RNA 57 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AAGCGUGAUUAUAAAAAAUGAUUUAAAUAUUUUUCUGAGGAAGUAUAUGCAGGACAUAUUGUGAAUUAGGAAUUCUUCGUUUAUGAUC snr13 yeast small nucleolar RNA 13 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AGGAAGUUUUUUCCUUUUUAUAUGAUGAAUAUGAGUGCAUUUGGCUCGAGUUGCUGUUUGGCUUUUGCCAAAUCAGUAACGGUGUGGAAAAACUCAAGCUACCUUUUUUUACUUUUAUCUGACC snr62 yeast small nuclear RNA 62 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUUUAUGAUGAAUUUAUGUUUUCAAUCUUAUCUACAUUAUCUGAAUUAAUAGCUAACAAUAGUUAUAAUGGAAGAUAUACGACUAUCAACAAUUCUGAAA snr72 yeast-1 small nucleolar RNA 72 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUGAUGUGAUGACAACUUCUUGAGCUAUAUAUUUUCUUGAGAACAUCAAUGAAGAAAACGUCUCAUCAAAUGAUUUGCACGUCAGUCUGAUCACAAGC snr71 yeast small nucleolar RNA 71 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUUAUAUGAUGAUAACCUUCUCAGCUCACUCAGAUCUUUUGAUAUGAUUGAUAAAAAUUUCCUAUCCAACAUUCAUCAAUUUAUCUGACC snr74 yeast small nucleolar RNA 74 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UGCAGAAGAUGAAACAAAUUACUCAAAUAGACAAGCAUAUGUCUGAUCUUCAUGAUUGAAAAGAGCAAUUAGUGUCUGAUGCAAUUUA snr77 yeast small nucleolar RNA 77 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUCAUAUGAUGAUUAUAACAAAAACAAAAGCUGGAAUUACUGGCUGAACGAGUAUAUGUUGAUACGUUUUUGCACUAUCCUGACCUAG snr48 yeast small nuclear RNA 48 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UCAUAAUGAUGAUUUCACUUAUACCUAUAUGUUUUUUCUGGCAUCUCUAAUGUUAGGAUGUGAAGUUUAAGUACUCUCCAUUCAAUGAAUACAAUUUUUGACAAUAUCUGAUU rrna 18s yeast Ribosomal RNA 18S Yeast rrna ribosomal rna rRNA rrna yeast Saccharomyces cerevisiae Baker's yeast UAUCUGGUUGAUCCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCUAAGUAUAAGCAAUUUAUACAGUGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUUUGAUAGUUCCUUUACUACAUGGUAUAACUGUGGUAAUUCUAGAGCUAAUACAUGCUUAAAAUCUCGACCCUUUGGAAGAGAUGUAUUUAUUAGAUAAAAAAUCAAUGUCUUCGGACUCUUUGAUGAUUCAUAAUAACUUUUCGAAUCGCAUGGCCUUGUGCUGGCGAUGGUUCAUUCAAAUUUCUGCCCUAUCAACUUUCGAUGGUAGGAUAGUGGCCUACCAUGGUUUCAACGGGUAACGGGGAAUAAGGGUUCGAUUCCGGAGAGGGAGCCUGAGAAACGGCUACCACAUCCAAGGAAGGCAGCAGGCGCGCAAAUUACCCAAUCCUAAUUCAGGGAGGUAGUGACAAUAAAUAACGAUACAGGGCCCAUUCGGGUCUUGUAAUUGGAAUGAGUACAAUGUAAAUACCUUAACGAGGAACAAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUUAAAGUUGUUGCAGUUAAAAAGCUCGUAGUUGAACUUUGGGCCCGGUUGGCCGGUCCGAUUUUUUCGUGUACUGGAUUUCCAACGGGGCCUUUCCUUCUGGCUAACCUUGAGUCCUUGUGGCUCUUGGCGAACCAGGACUUUUACUUUGAAAAAAUUAGAGUGUUCAAAGCAGGCGUAUUGCUCGAAUAUAUUAGCAUGGAAUAAUAGAAUAGGACGUUUGGUUCUAUUUUGUUGGUUUCUAGGACCAUCGUAAUGAUUAAUAGGGACGGUCGGGGGCAUCAGUAUUCAAUUGUCAGAGGUGAAAUUCUUGGAUUUAUUGAAGACUAACUACUGCGAAAGCAUUUGCCAAGGACGUUUUCAUUAAUCAAGAACGAAAGUUAGGGGAUCGAAGAUGAUCAGAUACCGUCGUAGUCUUAACCAUAAACUAUGCCGACUAGGGAUCGGGUGGUGUUUUUUUAAUGACCCACUCGGCACCUUACGAGAAAUCAAAGUCUUUGGGUUCUGGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGGAAUUGACGGAAGGGCACCACCAGGAGUGGAGCCUGCGGCUUAAUUUGACUCAACACGGGGAAACUCACCAGGUCCAGACACAAUAAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUUGUGGGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAACGAACGAGACCUUAACCUACUAAAUAGUGGUGCUAGCAUUUGCUGGUUAUCCACUUCUUAGAGGGACUAUCGGUUUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUAGACGUUCUGGGCCGCACGCGCGCUACACUGACGGAGCCAGCGAGUCUAACCUUGGCCGAGAGGUCUUGGUAAUCUUGUGAAACUCCGUCGUGCUGGGGAUAGAGCAUUGUAAUUAUUGCUCUUCAACGAGGAAUUCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCCCUUUGUACACACCGCCCGUCGCUAGUACCGAUUGAAUGGCUUAGUGAGGCCUCAGGAUCUGCUUAGAGAAGGGGGCAACUCCAUCUCAGAGCGGAGAAUUUGGACAAACUUGGUCAUUUAGAGGAACUAAAAGUCGUAACAAGGUUUCCGUAGGUGAACCUGCGGAAGGAUCAUUA snr68 yeast-1 small nuclear RNA 68 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UAUCAUGAUGAGCAUUUAUUUUACUGCGUUAUCGUAUUGACGGGGGCUGUUUAAGUACAGUCUGUUUUAUAAUCUAUAUUCAUUUAUAUUUUAUAUUUCUUACCGAGGAAAUUGACUCUUAACAGAUUUGCUGAAA snr78 yeast small nuclear RNA 78 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UCCCUUGAUGACCAAAAUAAAUUUUUACAAACUAGAGUUUCUGAAUCUUUUGUGAUUAGAACGUUUAUUCUUAUUUCUGAGGUUUUU snr69 yeast small nucleolar RNA 69 Yeast snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast GUUUAUGAUGAGACCACGUCCUUAGUGACAAUGCUAUAAACCCAGCUCUUCGAUUCGUUUUUAAUGAAAGGGAGAAGAUUUUUUUGUCAAACGCUCUGAGU snr66 yeast-1 small nuclear RNA 66 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast AUCAAAUGAUGAAAUACCAAUGCAACAGAGUCAAGCUCUGAGUUUCAAAAAGAAACAUGGACGAGAUUGCUUUUUUAUUACUGACC snr75 yeast small nucleolar RNA 75 snorna small nucleolar rna snoRNA snorna yeast Saccharomyces cerevisiae Baker's yeast UUAUGAUGAGAUAUUUAUAGAUGACGAGUCUGAUCAUUCGUGAAGACACAACUAUUAAAAUUACCAUUCAUGCCUUUCUGAAGCUGUUU snr13 rrna25s-1 1 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain certain certain sequence position certain certain certain sequence position certain 24 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr39b yeast-1 1 20 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 21 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 snr40 rrna18s-1 1 3 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr40 yeast-1 1 3 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2, Fig3 rrna 18s yeast-snr41 yeast-1 1 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 5 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 18s yeast-snr51 yeast-1 1 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 19 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 18s yeast-snr47 yeast-1 1 17 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr47 yeast-1 1 17 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr48 yeast-1 1 30 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr50 yeast-1 1 7 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2, Fig 3 rrna 25s yeast-snr51 yeast-1 1 19 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr52 yeast-1 1 12 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr53 yeast-1 1 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 10 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 18s yeast-snr54 yeast-1 1 22 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr57 yeast-1 1 23 unspecified role unspecified role unspecified role unspecified role 31 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr56 yeast-1 1 8 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 snr58 yeast-rrna 25s yeast-1 1 15 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr60 yeast_1-1 1 2 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2, fig 3 rrna 25s yeast-snr61 yeast-1 1 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 18 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr62 yeast-1 1 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 25 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr63 yeast-1 1 14 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr64 yeast-1 1 20 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 13 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr65 yeast-1 1 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 6 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr66 yeast_1-1 1 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 35 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr67 yeast_1-1 1 9 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr69 yeast-1 1 20 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 34 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr68 yeast_1-1 1 32 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr72 yeast_1-2 1 26 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr71 yeast-1 1 27 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr73 yeast-2 1 20 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 11 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 25s yeast-snr76 yeast-2 1 4 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr79 yeast-1 1 31 unspecified role unspecified role neutral component neutral component C methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 16 unspecified role unspecified role neutral component neutral component physical association physical association Table 2 rrna 18s yeast-snr74 yeast-2 1 28 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component A methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 25s yeast-snr75 yeast-2 1 36 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component G methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2 rrna 18s yeast-snr77 yeast-2 1 31 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain 29 unspecified role unspecified role neutral component neutral component physical association physical association Table 2, Fig3 rrna 25s yeast-snr79 yeast-2 1 33 unspecified role unspecified role neutral component neutral component 20 unspecified role unspecified role neutral component neutral component U methylation rna chemical modification RNA chemical modification RNA chemical modification post-transcriptional modification rna chemical modification certain certain sequence position certain certain certain sequence position certain physical association physical association Table 2