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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
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        <attribute name="id-validation-regexp" nameAc="MI:0628">MINT-[0-9]+</attribute>
        <attribute name="search-url" nameAc="MI:0615">https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac}</attribute>
        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>The sea anemone actinoporins (Arg-Gly-Asp) conserved motif is involved in maintaining the competent oligomerization state of these pore-forming toxins.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="24418371" refType="primary-reference" refTypeAc="MI:0358"/>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">The sea anemone actinoporins (Arg-Gly-Asp) conserved motif is involved in maintaining the competent oligomerization state of these pore-forming toxins.</attribute>
            <attribute name="journal" nameAc="MI:0885">FEBS J. (1742-464X)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2014</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">García-Linares S., Richmond R., García-Mayoral M.F., Bustamante N., Bruix M., Gavilanes J.G., Martínez-Del-Pozo A.</attribute>
            <attribute name="contact-email" nameAc="MI:0634">ppgf@bbm1.ucm.es</attribute>
            <attribute name="author-announcement">18-Feb-2014: Contacted by IntAct-Help.</attribute>
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        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>molecular sieving</shortLabel>
            <fullName>molecular sieving</fullName>
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            <alias type="go synonym" typeAc="MI:0303">Size Exclusion Chromatography</alias>
            <alias type="synonym" typeAc="MI:1041">Size Exclusion Chromatography</alias>
            <alias type="synonym" typeAc="MI:1041">Gel Filtration</alias>
            <alias type="synonym" typeAc="MI:1041">Sizing column</alias>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="contact-email" nameAc="MI:0634">ppgf@bbm1.ucm.es</attribute>
          <attribute name="accepted">Accepted 2014-JAN-14 by LUANA</attribute>
          <attribute name="publication year" nameAc="MI:0886">2014</attribute>
          <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
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      <interactor id="2">
        <names>
          <shortLabel>actp2_stihl</shortLabel>
          <fullName>DELTA-stichotoxin-She4b</fullName>
          <alias type="gene name synonym" typeAc="MI:0302">Cytolysin III</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Sticholysin II</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Sticholysin-2</alias>
        </names>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR009104"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR015926"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1GWY"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1O71"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="1O72"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2L2B"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2L38"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006812" version="SP_127"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0015267" version="SP_127"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042151" version="SP_127"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042802" version="SP_127"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0046931" version="SP_127"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0052331" version="SP_127"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0090729" version="SP_127"/>
        </xref>
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          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
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        </interactorType>
        <organism ncbiTaxId="6123">
          <names>
            <shortLabel>stohe</shortLabel>
            <fullName>Stoichactis helianthus</fullName>
          </names>
        </organism>
        <sequence>ALAGTIIAGASLTFQVLDKVLEELGKVSRKIAVGIDNESGGTWTALNAYFRSGTTDVILPEFVPNTKALLYSGRKDTGPVATGAVAAFAYYMSSGNTLGVMFSVPFDYNWYSNWWDVKIYSGKRRADQGMYEDLYYGNPYRGDNGWHEKNLGYGLRMKGIMTSAGEAKMQIKISR</sequence>
        <attributeList>
          <attribute name="crc64">B50566B02D351B1D</attribute>
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      </interactor>
    </interactorList>
    <interactionList>
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          <shortLabel>actp2</shortLabel>
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            <names>
              <alias type="author assigned name" typeAc="MI:0345">StnII</alias>
            </names>
            <interactorRef>2</interactorRef>
            <participantIdentificationMethodList>
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                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
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              </participantIdentificationMethod>
              <participantIdentificationMethod>
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                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
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            </participantIdentificationMethodList>
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              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            <experimentalRoleList>
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                <names>
                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
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                <xref>
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                  <shortLabel>purified</shortLabel>
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            <shortLabel>direct interaction</shortLabel>
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        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">f3</attribute>
          <attribute name="comment" nameAc="MI:0612">Sedimentation velocity (560 μM protein concentration in water)&#xd;
experiments were conducted (Fig. 3). The sedimentation coefficients obtained&#xd;
for the StnII RAD mutant in these conditions indicated the presence of different&#xd;
species into the sample: monomer (s20,w= 2.2 S, 56%), dimer (s20,w= 3.1 S,&#xd;
42%,) and tetramer (s20,w= 5.25 S, 2%), suggesting an aggregating prone&#xd;
behaviour of this mutant in solution. Not surprisingly, equilibrium sedimentation&#xd;
analysis of this same sample after an almost 40-fold dilution (15 μM protein&#xd;
concentration) yielded results compatible with only a single monomer species&#xd;
(Fig. 3) with an average molecular mass (MWapp) of 20.7 ± 0.7 kDa (average of&#xd;
all velocities assayed).</attribute>
        </attributeList>
      </interaction>
      <interaction id="5" imexId="IM-22076-2">
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          <shortLabel>actp2-1</shortLabel>
        </names>
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        <experimentList>
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        </experimentList>
        <participantList>
          <participant id="6">
            <names>
              <alias type="author assigned name" typeAc="MI:0345">StnII</alias>
            </names>
            <interactorRef>2</interactorRef>
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                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
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                  <shortLabel>neutral component</shortLabel>
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                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
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            </experimentalPreparationList>
            <stoichiometry value="4"/>
            <attributeList>
              <attribute name="comment" nameAc="MI:0612">RAD mutant (G142A)</attribute>
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        </participantList>
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          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
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        </interactionType>
        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">f3</attribute>
          <attribute name="comment" nameAc="MI:0612">Sedimentation velocity (560 μM protein concentration in water)&#xd;
experiments were conducted (Fig. 3). The sedimentation coefficients obtained&#xd;
for the StnII RAD mutant in these conditions indicated the presence of different&#xd;
species into the sample: monomer (s20,w= 2.2 S, 56%), dimer (s20,w= 3.1 S,&#xd;
42%,) and tetramer (s20,w= 5.25 S, 2%), suggesting an aggregating prone&#xd;
behaviour of this mutant in solution. Not surprisingly, equilibrium sedimentation&#xd;
analysis of this same sample after an almost 40-fold dilution (15 μM protein&#xd;
concentration) yielded results compatible with only a single monomer species&#xd;
(Fig. 3) with an average molecular mass (MWapp) of 20.7 ± 0.7 kDa (average of&#xd;
all velocities assayed).</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
</entrySet>