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  <entry>
    <source releaseDate="2022-02-04">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
      </names>
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      <attributeList>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it/mint</attribute>
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        <attribute name="url" nameAc="MI:0614">https://mint.bio.uniroma2.it</attribute>
        <attribute name="id-validation-regexp" nameAc="MI:0628">MINT-[0-9]+</attribute>
        <attribute name="search-url" nameAc="MI:0615">https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac}</attribute>
        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Conformational transition of the lid helix covering the protease active site is essential for the ATP-dependent protease activity of FtsH.</fullName>
        </names>
        <bibref>
          <xref>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Conformational transition of the lid helix covering the protease active site is essential for the ATP-dependent protease activity of FtsH.</attribute>
            <attribute name="journal" nameAc="MI:0885">FEBS Lett. (0014-5793)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2012</attribute>
            <attribute name="author-list" nameAc="MI:0636">Suno R., Shimoyama M., Abe A., Shimamura T., Shimodate N., Watanabe YH., Akiyama Y., Yoshida M.</attribute>
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        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>molecular sieving</shortLabel>
            <fullName>molecular sieving</fullName>
            <alias type="go synonym" typeAc="MI:0303">Gel Filtration</alias>
            <alias type="go synonym" typeAc="MI:0303">Size Exclusion Chromatography</alias>
            <alias type="synonym" typeAc="MI:1041">Size Exclusion Chromatography</alias>
            <alias type="synonym" typeAc="MI:1041">Gel Filtration</alias>
            <alias type="synonym" typeAc="MI:1041">Sizing column</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0071" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1175" refType="identity" refTypeAc="MI:0356"/>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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          </xref>
        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Suno R., Shimoyama M., Abe A., Shimamura T., Shimodate N., Watanabe YH., Akiyama Y., Yoshida M.</attribute>
          <attribute name="journal" nameAc="MI:0885">FEBS Lett. (0014-5793)</attribute>
          <attribute name="publication year" nameAc="MI:0886">2012</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>ftsh_ecoli</shortLabel>
          <fullName>ATP-dependent zinc metalloprotease FtsH</fullName>
          <alias type="gene name" typeAc="MI:0301">ftsH</alias>
          <alias type="gene name synonym" typeAc="MI:0302">hflB</alias>
          <alias type="gene name synonym" typeAc="MI:0302">mrsC</alias>
          <alias type="gene name synonym" typeAc="MI:0302">tolZ</alias>
          <alias type="locus name" typeAc="MI:0305">b3178</alias>
          <alias type="locus name" typeAc="MI:0305">JW3145</alias>
          <alias type="gene name synonym" typeAc="MI:0302">std</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Cell division protease FtsH</alias>
        </names>
        <xref>
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          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="P28691" version="SP_24" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q2M934" version="SP_24" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="ensemblbacteria" id="AAC76210" version="SP_134" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblbacteria" id="BAE77222" version="SP_134" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-548381" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_417645.1"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="WP_001107467.1"/>
          <secondaryRef db="mint" dbAc="MI:0471" id="P0AAI3"/>
          <secondaryRef db="dip" dbAc="MI:0465" id="DIP-35828N"/>
          <secondaryRef db="ensemblbacteria" id="AAC76210" version="SP_134" refType="transcript"/>
          <secondaryRef db="ensemblbacteria" id="b3178" version="SP_134" refType="gene"/>
          <secondaryRef db="ensemblbacteria" id="BAE77222" version="SP_134" refType="gene"/>
          <secondaryRef db="ensemblbacteria" id="BAE77222" version="SP_134" refType="transcript"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0004176" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0004222" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005524" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005886" version="SP_134"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006508" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008270" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0030163" version="SP_134"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0098796" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR000642" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003593" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003959" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003960" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR005936" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR011546" version="SP_134"/>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR037219" version="SP_134"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR041569" version="SP_134"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4V0B" version="SP_134"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="83333">
          <names>
            <shortLabel>ecoli</shortLabel>
            <fullName>Escherichia coli (strain K12)</fullName>
          </names>
        </organism>
        <sequence>MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRPVDEPRTPNPGNTMSEQLGDK</sequence>
        <attributeList>
          <attribute name="remark-internal">DIP protein P0AAI3 original sequence version: 45</attribute>
          <attribute name="crc64">E24A753D8F486CA1</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="3">
        <names>
          <shortLabel>ftsh-1</shortLabel>
        </names>
        <xref>
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          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-8163360" refType="identity" refTypeAc="MI:0356"/>
        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="4">
            <names>
              <alias type="author assigned name" typeAc="MI:0345">FtsH</alias>
            </names>
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              <primaryRef db="mint" dbAc="MI:0471" id="MINT-8388845" refType="identity" refTypeAc="MI:0356"/>
            </xref>
            <interactorRef>2</interactorRef>
            <participantIdentificationMethodList>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                <xref>
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                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
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              </participantIdentificationMethod>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                <xref>
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                </xref>
              </participantIdentificationMethod>
            </participantIdentificationMethodList>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0497" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-55" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0350" refType="identity" refTypeAc="MI:0356"/>
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                </xref>
              </experimentalPreparation>
            </experimentalPreparationList>
            <stoichiometry value="6"/>
            <attributeList>
              <attribute name="comment" nameAc="MI:0612">Stoichiometry: 6.0</attribute>
            </attributeList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
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            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">f2</attribute>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="source-text">We tested the stability of the FtsH mutant hexamers by gel-filtration analysis in the  presence of ATP. The main peaks of all G448 mutants and wild-type protein appeared at the  position equivalent to 580 kDa, which is the molecular mass of the hexamer (Fig. 2). This result  shows that the mutations at G448 do not interfere with the assembly of FtsH into the hexamer</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
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