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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
      </names>
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      <attributeList>
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        <attribute name="url" nameAc="MI:0614">url&amp;gt;http://mint.bio.uniroma2.it/mint/</attribute>
        <attribute name="url" nameAc="MI:0614">https://mint.bio.uniroma2.it</attribute>
        <attribute name="id-validation-regexp" nameAc="MI:0628">MINT-[0-9]+</attribute>
        <attribute name="search-url" nameAc="MI:0615">https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac}</attribute>
        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Comparative structural and functional analysis of two octaheme nitrite reductases from closely related Thioalkalivibrio species.</fullName>
        </names>
        <bibref>
          <xref>
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            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-8041991" refType="identity" refTypeAc="MI:0356"/>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Comparative structural and functional analysis of two octaheme nitrite reductases from closely related Thioalkalivibrio species.</attribute>
            <attribute name="journal" nameAc="MI:0885">FEBS J. (1742-464X)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2012</attribute>
            <attribute name="author-list" nameAc="MI:0636">Tikhonova T., Tikhonov A., Trofimov A., Polyakov K., Boyko K., Cherkashin E., Rakitina T., Sorokin D., Popov V.</attribute>
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        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>x-ray diffraction</shortLabel>
            <fullName>x-ray crystallography</fullName>
            <alias type="go synonym" typeAc="MI:0303">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">x-ray diffraction</alias>
          </names>
          <xref>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Tikhonova T., Tikhonov A., Trofimov A., Polyakov K., Boyko K., Cherkashin E., Rakitina T., Sorokin D., Popov V.</attribute>
          <attribute name="contact-email" nameAc="MI:0634">ttikhonova@inbi.ras.ru</attribute>
          <attribute name="journal" nameAc="MI:0885">FEBS J. (1742-464X)</attribute>
          <attribute name="publication year" nameAc="MI:0886">2012</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>e7edq7_9gamm</shortLabel>
          <fullName>Nitrite reductase (cytochrome; ammonia-forming)</fullName>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="E7EDQ7" refType="identity" refTypeAc="MI:0356"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3SXQ"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR003321"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3TTB"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR036280"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006807" version="TrEMBL_65"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042279" version="TrEMBL_65"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042597" version="TrEMBL_65"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0046872" version="TrEMBL_65"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="108010">
          <names>
            <shortLabel>thioalkalivibrio paradoxus</shortLabel>
            <fullName>thioalkalivibrio paradoxus</fullName>
          </names>
        </organism>
        <sequence>MNDLNRLGRVGRWVAGAACLFLASAAHAGSGDQLKPVDALQCYDCHTQIEDMHVVGKHATVNCVHCHDATEHVETASARRMGERPVTHTSPEACASCHTAQFNSFASVRHESHPREEKANPRSRSPKFDTLIGAHGFSLEHAEPRSHAFMLVDHFIVDRAYGGRFQYKSWQNVTDGLGAVRGAWTVIEDMDPTTSDQRRFLAQTATAANPVCLNCKTQDHILDWAYMGDEHDAAKWARTSKVVDFARDLHHPVNCYMCHDPHSTEPRVVRDALIHAVVDQGLGTYPYDEAKSEHVTLTPVTFQRGGEDFRKIGLLNVADSNLMCGQCHVEYNCNPGFQQSDGAPVGMDDRRTNHFFWANVFDYAEAAKEIDFFDFTHVTTGAPLPKLQHPELETFWGSTHERNGVTCADCHMPRVKLENGKEYTMHSPRTPRDMMNRACLNCHDGWTEAEAEYAIDYIKNYTHGKIMKAEFWLARMIDLFPVAKRAGVSEDVLNEVRALHYDAHLHWEWWTAENSVGFHNPDQARESLMKSITKSKEGVGKLDAAIDAAVAAN</sequence>
        <attributeList>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="crc64">87FAB3850F353B1E</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="3">
        <names>
          <shortLabel>e7edq7</shortLabel>
        </names>
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        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="4">
            <names>
              <alias type="author assigned name" typeAc="MI:0345">TvPaR</alias>
            </names>
            <xref>
              <primaryRef db="mint" dbAc="MI:0471" id="MINT-8391576" refType="identity" refTypeAc="MI:0356"/>
            </xref>
            <interactorRef>2</interactorRef>
            <participantIdentificationMethodList>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                <xref>
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              </participantIdentificationMethod>
              <participantIdentificationMethod>
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                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
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              </participantIdentificationMethod>
            </participantIdentificationMethodList>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            </biologicalRole>
            <experimentalRoleList>
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                <names>
                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
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                <xref>
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            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
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              </experimentalPreparation>
            </experimentalPreparationList>
            <stoichiometry value="2"/>
            <attributeList>
              <attribute name="comment" nameAc="MI:0612">Stoichiometry: 2.0</attribute>
            </attributeList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
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        </interactionType>
        <attributeList>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="source-text">Structural data are available in the RCSB Protein Data Bank database under the accession
numbers 3SXQ and 3TTB.</attribute>
          <attribute name="source-text">There are two TvPaR subunits per asymmetric unit (A and B). The subunits of TvPaR
form a hexamer with point group symmetry 32 (Fig. S1) similar to the TvNiR hexamer</attribute>
          <attribute name="figure legend" nameAc="MI:0599">t2 f1 sf1</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
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