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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
      </names>
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        <attribute name="url" nameAc="MI:0614">url&amp;gt;http://mint.bio.uniroma2.it/mint/</attribute>
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        <attribute name="search-url" nameAc="MI:0615">https://mint.bio.uniroma2.it/index.php/results-interactions/?id=${ac}</attribute>
        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Conformational changes upon ligand binding in the essential class II fumarase Rv1098c from Mycobacterium tuberculosis.</fullName>
        </names>
        <bibref>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Conformational changes upon ligand binding in the essential class II fumarase Rv1098c from Mycobacterium tuberculosis.</attribute>
            <attribute name="journal" nameAc="MI:0885">FEBS Lett. (0014-5793)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2012</attribute>
            <attribute name="author-list" nameAc="MI:0636">Mechaly AE., Haouz A., Miras I., Barilone N., Weber P., Shepard W., Alzari PM., Bellinzoni M.</attribute>
            <attribute name="remark-internal">suggested by lperfetto</attribute>
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        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>x-ray diffraction</shortLabel>
            <fullName>x-ray crystallography</fullName>
            <alias type="go synonym" typeAc="MI:0303">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">x-ray diffraction</alias>
          </names>
          <xref>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Mechaly AE., Haouz A., Miras I., Barilone N., Weber P., Shepard W., Alzari PM., Bellinzoni M.</attribute>
          <attribute name="remark-internal">suggested by lperfetto</attribute>
          <attribute name="journal" nameAc="MI:0885">FEBS Lett. (0014-5793)</attribute>
          <attribute name="publication year" nameAc="MI:0886">2012</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>fumc_myctu</shortLabel>
          <fullName>Fumarate hydratase class II</fullName>
          <alias type="gene name" typeAc="MI:0301">fumC</alias>
          <alias type="gene name synonym" typeAc="MI:0302">fum</alias>
          <alias type="orf name" typeAc="MI:0306">MTV017.51c</alias>
          <alias type="locus name" typeAc="MI:0305">Rv1098c</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Aerobic fumarase</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Iron-independent fumarase</alias>
        </names>
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          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="O53446" version="SP_9" refType="secondary-ac" refTypeAc="MI:0360"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005576" version="SP_46"/>
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          <secondaryRef db="refseq" dbAc="MI:0481" id="WP_003405805.1"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5F91"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="5F92"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4ADM"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4APB"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR018951"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="3NO9"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR008948"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR022761"/>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="6S88"/>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="83332">
          <names>
            <shortLabel>myctu</shortLabel>
            <fullName>Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)</fullName>
          </names>
        </organism>
        <sequence>MAVDADSANYRIEHDTMGEVRVPAKALWRAQTQRAVENFPISGRGLERTQIRALGLLKGACAQVNSDLGLLAPEKADAIIAAAAEIADGQHDDQFPIDVFQTGSGTSSNMNTNEVIASIAAKGGVTLHPNDDVNMSQSSNDTFPTATHIAATEAAVAHLIPALQQLHDALAAKALDWHTVVKSGRTHLMDAVPVTLGQEFSGYARQIEAGIERVRACLPRLGELAIGGTAVGTGLNAPDDFGVRVVAVLVAQTGLSELRTAANSFEAQAARDGLVEASGALRTIAVSLTKIANDIRWMGSGPLTGLAEIQLPDLQPGSSIMPGKVNPVLPEAVTQVAAQVIGNDAAIAWGGANGAFELNVYIPMMARNILESFKLLTNVSRLFAQRCIAGLTANVEHLRRLAESSPSIVTPLNSAIGYEEAAAVAKQALKERKTIRQTVIDRGLIGDRLSIEDLDRRLDVLAMAKAEQLDSDRL</sequence>
        <attributeList>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="crc64">4052F93F963D3DBB</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="3">
        <names>
          <shortLabel>fumc-1</shortLabel>
        </names>
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          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-7840818" refType="identity" refTypeAc="MI:0356"/>
        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="4">
            <names>
              <alias type="author assigned name" typeAc="MI:0345">Rv1098c</alias>
            </names>
            <xref>
              <primaryRef db="mint" dbAc="MI:0471" id="MINT-8369036" refType="identity" refTypeAc="MI:0356"/>
            </xref>
            <interactorRef>2</interactorRef>
            <participantIdentificationMethodList>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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              </participantIdentificationMethod>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>predetermined</shortLabel>
                  <fullName>predetermined participant</fullName>
                  <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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                </xref>
              </participantIdentificationMethod>
            </participantIdentificationMethodList>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0497" refType="identity" refTypeAc="MI:0356"/>
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                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0350" refType="identity" refTypeAc="MI:0356"/>
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                </xref>
              </experimentalPreparation>
            </experimentalPreparationList>
            <stoichiometry value="4"/>
            <attributeList>
              <attribute name="comment" nameAc="MI:0612">Stoichiometry: 4.0</attribute>
            </attributeList>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0407" refType="identity" refTypeAc="MI:0356"/>
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          </xref>
        </interactionType>
        <attributeList>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="figure legend" nameAc="MI:0599">t1 f1 f2 f3</attribute>
          <attribute name="source-text">Coordinates and structure factors have been  deposited in the Protein Data Bank under the accession codes 4ADL (L-malate complex), 4ADM  (meso-tartrate complex), 4APA (S318A mutant) and 4APB (S318C mutant in complex with  fumarate).</attribute>
          <attribute name="source-text">As expected for a class II fumarase, the enzyme assembles as an homo-tetramer.</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
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