mpidb The Microbial Protein Interaction Database Erwinia chrysanthemi iron metabolism: the unexpected implication of the inner membrane platform within the type II secretion system. Erwinia chrysanthemi iron metabolism: the unexpected implication of the inner membrane platform within the type II secretion system. J. Bacteriol. (0021-9193) 2009 imex curation Douet V., Expert D., Barras F., Py B. Only protein-protein interactions dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) anti bait coip anti bait coimmunoprecipitation anti bait coip fingerprinting peptide massfingerprinting fingerprinting Douet V., Expert D., Barras F., Py B. Accepted 2013-JAN-31 by ORCHARD J. Bacteriol. (0021-9193) 2009 Only protein-protein interactions imex curation Erwinia chrysanthemi iron metabolism: the unexpected implication of the inner membrane platform within the type II secretion system. Erwinia chrysanthemi iron metabolism: the unexpected implication of the inner membrane platform within the type II secretion system. J. Bacteriol. (0021-9193) 2009 imex curation Douet V., Expert D., Barras F., Py B. Only protein-protein interactions yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Douet V., Expert D., Barras F., Py B. Accepted 2013-JAN-31 by ORCHARD J. Bacteriol. (0021-9193) 2009 Only protein-protein interactions imex curation e0sg67_dicd3 Protein translocase subunit SecA secA Dda3937_02235 protein protein dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) MLIKLLTKVFGSRNDRALRRMRKIVDVINRLEPDMETLSDDELKAKTQVFRDRIKKGETLESLLPEAFAVVREASKRVFGMRHFDVQLIGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGRGVHVVTVNDYLAQRDAENNRPLFEFLGLSVGINLPGMPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRELYYALVDEVDSILIDEARTPLIISGPAEDSSELYMRVNKIIPHLIRQEKEDSDTFQGEGHFSVDEKARQVNLTERGLVKIEELLVKGGIMEEGESLYSPANIMLMHHVTAALRAHVLFTRDVDYIVKDDEVIIVDEHTGRTMQGRRWSDGLHQAVEAKENVKINNENQTLASITFQNYFRIYEKLAGMTGTADTEAFEFSSIYKLDTIVVPTNRPMIRKDLPDLVYMTEQEKIGAIIEDIKERTAKGQPVLVGTISIEKSEVVSHALTKAGIKHNVLNAKFHAMEADIVAQAGRSGAVTIATNMAGRGTDIVLGGSWQAEVAQQENPDEAQIAAIKAEWQRRHDDVLAAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSNMMRKLGMKEGEAIEHPWVTKAIANAQRKVENRNFDIRKQLLEYDDVANDQRRAIYTQRNELLDASDISETINSIREDVFKVTIDAHIPPQSLEEMWDVPGLEQRLKNDFDLELPIAEWLDKEPDLHEETLRERIYAQAVELYGRKEEVVGSDVMRNFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFAMFAAMLEGLKYEVISTLSKVQVRMPEEVEALEQQRREEAERLARQQQLSHQDEAGSPYADRKIGRNDPCPCGSGKKYKQCHGRLQK 0AEAAFB94B62AEB6 e0shd8_dicd3 Periplasmic serine endoprotease DegP-like degQ Dda3937_00697 protein protein dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) MKKTSLLYSALALGIGLSLSSLPPANAALPAVVEGQALPSLAPMLEKVLPAVVSVHVEGTQVQRQRIPEEFKFFFGPNTPSEKQNSRPFEGLGSGVIINAEKGYVLTNNHVVNNADKIQVQLNDGREYDAKLIGRDEQTDIALLQLNDAKNLTEVKMADSDQLRVGDFAVAVGNPFGLGQTATSGIISALGRSGLNLEGLENFIQTDASINRGNSGGALVNLRGELIGINTAILAPSGGNVGIGFAIPSNMAQNLTQQLVEFGEVKRGLLGIKGSEMTSEIAKAFKVDAQRGAFVSEVIPKSAAAKAGIKAGDVLVSLDGKPISSFAELRAKIGTTAPGKTVRIGLLRDGKQQEVAVVLDNSANVTTNADTLSPALQGATLNNGQLKDGSKGVTIDNVAKDSAAAKVGLQKGDIIVGVNRERVENITQLRKILEAKPSVLALNIVRGDESIYLLLR D92958D9F1254AC8 e0sif0_dicd3 acsD Dda3937_02854 protein protein dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) MNNRNHDVLSRMISEKAALHGLLNCLIKEFAIPEGYLRYEWPDEMKGIPPGAYFDGADWKGIPMMIGLPDQLQLFVMVDRRDTFGSQHYLSDVYLRQAQGDWQCPDFEPLVARLLAACEHIAGRKNPELYEQILQSQRLVSAIVSHNGRQRADAPLQHYLQSEQGLWFGHPSHPAPKARLWPAHLGQEQWAPEFQARAALHQFEVPVDGLHIGANGLTPQQVLDGFADQQPASPGHAIICMHPVQAQLFMQDARVQQLLRDNVIRDLGQSGRVASPTASIRTWFIDDHDYFIKGSLNVRITNCVRKNAWYELESTVLIDRLFRQLLDQHADTLGGLVAAAEPGVVSWSPAAAGELDSHWFREQTGGILRENFCRRTGAERSIMAGTLFARGVDLQPMIQTFLRTHYGEALDDNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKLTDDLGIRYIDDDIHPRVRQSLLYSREQGWNRIMYCLFINHLSETILALSQGRPQLAPLMWRRVQQQLRAIQGELKQPSPELDALIAGHPVACKTNLKVRLAAEADRQASYVRLPSPWGHAVQHGSEVQHDERRHGDVRHEEARHGEVQHG 54F95308F3808343 e0sdc8_dicd3 togA Dda3937_04712 protein protein dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) MAEVIFNKLEKVYSNGFKAVHGIDLTIKDGEFMVIVGPSGCAKSTTLRMLAGLETISGGEVRIGEKIVNNLAPKDRGIAMVFQNYALYPHMTVRENLAFGLKLSKMPKDKIEAQVNEAAKILELEELMDRLPRQLSGGQAQRVAVGRAIVKKPDVFLFDEPLSNLDAKLRASMRIRISDLHKQLKKSGHPATSVYVTHDQTEAMTMGDRICVMKLGHIMQVDTPDNLYHFPKNMFVAGFIGAPEMNIKPGKLLEENGQITLQVGQYTMSLNQAKQDKVRGYVGKDICFGVRPEYVTVSEAPFDGGHFQGELVRAENMGHEFFMYIKVDGFELTSRMPSDEARVIINNRMNSKVYFKFDMDKCHIFDAKTEQNISL BDDAD63A758F6B97 e0sm39_dicd3 General secretion pathway protein F outF Dda3937_02417 protein protein dicd3 Dickeya dadantii (strain 3937) Erwinia chrysanthemi (strain 3937) MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEVTTRSGFSLSLRRSHRISASDLALLTRQLATLVAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSLAEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLTLVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMGVSDAVRAYGPWVVLLLVLAVMGFRVLLRQEKHRLVFHRRLLFLPLIGRIARGLNTARYARTLSILNSSAVPLLQAMRISGDVLTNDYARFRLGQATDAVREGVSLHKALEQTSLFPPMMRHMIASGERSGELDGMLTRAADNQDREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPILQLNTLMSM 9A6CE8BF238850F7 gspf_dicch Type II secretion system protein F outF General secretion pathway protein F Pectic enzymes secretion protein OutF protein protein erwch Erwinia chrysanthemi Pectobacterium chrysanthemi Erwinia chrysanthemi MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEAAPRSGFSLSFGRSHRIASDLALLTRQLATLVAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSLAEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRHEMRSRIQQAMIYPCVLTLVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMSASDAVRTYGPWVVLLLVLAIMGFRVLLRQEKHRLVFHRRLLFLPVVGRVARGLNTARYARTLSILNSSAVPLLQAMRISGDVLTNDYARFRLGQATDAVREGVTLHKALEQTALFPPMMRHMIASERRRARRHVNPRGDNQDREFSAQMTLVLGLFEPLLVVSMAGIVLFIVLAILQPILQLNTLMSM AB45B7D04B9B6FAE q93at8_dicch acsD protein protein erwch Erwinia chrysanthemi Pectobacterium chrysanthemi Erwinia chrysanthemi MNNRNHDVLSRMISEKAALHGLLNCLIKEFAIPEGYLRYEWPDEMKGIPPGAYFDGADWKGIPMMIGLPDQLQLFVMVDRRDTFGSQHYLSDVYLRQAQGDWQCPDFEPLVARLLAACEHIAGRKNPELYEQILQSQRLVSAIVSHNGRQRADAPLQHYLQSEQGLWFGHPSHPAPKARLWPAHLGQEQWAPEFQARAALHQFEVPVDGLHIGANGLTPQQVLDGFADQQPASPGHAIICMHPVQAQLFMQDARVQQLLRDNVIRDLGQSGRVASPTASIRTWFIDDHDYFIKGSLNVRITNCVRKNAWYELESTVLIDRLFRQLLDQHADTLGGLVAAAEPGVVSWSPAAAGELDSHWFREQTGGILRENFCRRTGAERSIMAGTLFARGVDLQPMIQTFLRTHYGEALDDNALLYWFDDYQTRLLRPVLSLFFNHGVVMEPHLQNSVLVHQQGRPQQVLLRDFEGVKLTDDLGIRYIDDDIHPRVRQSLLYSREQGWNRIMYCLFINHLSETILALSQGRPQLAPLMWRRVQQQLRAIQGELKQPSPELDALIAGHPVACKTNLKVRLAAEADRQASYVRLPSPWGHAVQHGSEVQHDERRHGDVRHEEARHGEVQHG 54F95308F3808343 outf-acsd-4 1 6 unspecified role unspecified role prey prey 7 unspecified role unspecified role bait bait 5 unspecified role unspecified role prey prey 3 unspecified role unspecified role prey prey 4 unspecified role unspecified role prey prey association association fig. 1 A tail-specific protease was also identified by name but could not be mapped to a known sequence. outf-acsd-1 2 8 unspecified role unspecified role bait bait region sufficient to bind sufficient binding region sufficient to bind undetermined undetermined sequence position undetermined undetermined undetermined sequence position undetermined 9 unspecified role unspecified role prey prey physical association physical association Fig. 2