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  <entry>
    <source releaseDate="2022-02-04">
      <names>
        <shortLabel>MINT</shortLabel>
        <fullName>MINT, Dpt of Biology, University of Rome Tor Vergata</fullName>
        <alias type="synonym" typeAc="MI:1041">MINT</alias>
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        <attribute name="definition">The Molecular INTeraction database (MINT) is a relational database designed to store interactions between biological molecules.</attribute>
        <attribute name="url" nameAc="MI:0614">http://mint.bio.uniroma2.it</attribute>
      </attributeList>
    </source>
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        <names>
          <fullName>Synergy between the N-terminal and C-terminal domains of Mycobacterium tuberculosis HupB is essential for high-affinity binding, DNA supercoiling and inhibition of RecA-promoted strand exchange.</fullName>
        </names>
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            <attribute name="journal" nameAc="MI:0885">FEBS J. (1742-464X)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2011</attribute>
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            <attribute name="author-list" nameAc="MI:0636">Sharadamma N., Khan K., Kumar S., Patil KN., Hasnain SE., Muniyappa K.</attribute>
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        <hostOrganismList>
          <hostOrganism ncbiTaxId="-1">
            <names>
              <shortLabel>in vitro</shortLabel>
              <fullName>In vitro</fullName>
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          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>crosslink</shortLabel>
            <fullName>cross-linking study</fullName>
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            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
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          <attribute name="author-list" nameAc="MI:0636">Sharadamma N., Khan K., Kumar S., Patil KN., Hasnain SE., Muniyappa K.</attribute>
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          <attribute name="publication year" nameAc="MI:0886">2011</attribute>
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        <names>
          <shortLabel>dbh_myctu</shortLabel>
          <fullName>DNA-binding protein HU homolog</fullName>
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          <alias type="gene name synonym" typeAc="MI:0302">hlp</alias>
          <alias type="gene name synonym" typeAc="MI:0302">hupB</alias>
          <alias type="gene name synonym" typeAc="MI:0302">lbp21</alias>
          <alias type="gene name synonym" typeAc="MI:0302">21 kDa laminin-2-binding protein</alias>
          <alias type="gene name synonym" typeAc="MI:0302">28 kDa iron-regulated protein</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Histone-like protein</alias>
          <alias type="orf name" typeAc="MI:0306">MTCY349.01</alias>
          <alias type="locus name" typeAc="MI:0305">Rv2986c</alias>
        </names>
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          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4PT4"/>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR000119"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="NP_217502.1"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4DKY"/>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR020816"/>
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        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="83332">
          <names>
            <shortLabel>myctu</shortLabel>
            <fullName>Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)</fullName>
          </names>
        </organism>
        <sequence>MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPAEGPAVKRGVGASAAKKVAKKAPAKKATKAAKKAATKAPARKAATKAPAKKAATKAPAKKAVKATKSPAKKVTKAVKKTAVKASVRKAATKAPAKKAAAKRPATKAPAKKATARRGRK</sequence>
        <attributeList>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="crc64">CB09AF20FB353544</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="3" imexId="IM-16764-1">
        <names>
          <shortLabel>hup-1</shortLabel>
        </names>
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        <experimentList>
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        <participantList>
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            <names>
              <alias type="author assigned name" typeAc="MI:0345">hupB</alias>
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            <interactorRef>2</interactorRef>
            <participantIdentificationMethodList>
              <participantIdentificationMethod>
                <names>
                  <shortLabel>weight silver stain</shortLabel>
                  <fullName>molecular weight estimation by silver staining</fullName>
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              <participantIdentificationMethod>
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                  <shortLabel>predetermined</shortLabel>
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              </participantIdentificationMethod>
            </participantIdentificationMethodList>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
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                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
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            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
                </names>
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                  <shortLabel>binding site</shortLabel>
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                    <shortLabel>binding region</shortLabel>
                    <fullName>binding-associated region</fullName>
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                    <shortLabel>deletion analysis</shortLabel>
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                        <shortLabel>certain</shortLabel>
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                    <end position="95"/>
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              </feature>
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          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
          </names>
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        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">F2</attribute>
          <attribute name="comment" nameAc="MI:0612">mint</attribute>
          <attribute name="comment" nameAc="MI:0612">The oligomerization state of HupB and HupBMtbN was examined by chemical  cross-linking, we observed a slower migrating band  corresponding to a dimer of HupB or HupBMtbN (Fig. 2, lanes 3 6, left and right panels  respectively) whose intensity increased with increasing concentrations of  glutaraldehyde. Taken together, these results suggest that both HupB and HupBMtbN
occur as dimers, and exclude the possible existence of protein aggregates in solution</attribute>
        </attributeList>
      </interaction>
    </interactionList>
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