IntAct European Bioinformatics Institute IntAct intact http://www.ebi.ac.uk/ http://www.ebi.ac.uk/intact/query/${ac} EBI-[0-9]+|IA:[0-9]+ INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions. http://www.ebi.ac.uk/intact European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom http://www.ebi.ac.uk/intact/ Identification of NdhL and Ssl1690 (NdhO) in NDH-1L and NDH-1M complexes of Synechocystis sp. PCC 6803. Identification of NdhL and Ssl1690 (NdhO) in NDH-1L and NDH-1M complexes of Synechocystis sp. PCC 6803. J. Biol. Chem. (0021-9258) 2005 Battchikova N., Zhang P., Rudd S., Ogawa T., Aro EM. Cyanobacteria - Interaction dataset based on Cyanobacteria proteins and related species Membrane protein complexes from synechocystis sp. PCC 6803 cells were first separated by blue native (BN)-PAGE. To resolve complex composition, the proteins were then separated by denaturing SDS-PAGE and the silver-stained spots were identify by mass spectrometry (MALDI-TOFF MS and ESI-MS/MS). Some bands were previously identified in Herranen et al. PMID:14730074. fig 1, table 1 evaaro@utu.fi syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) comig non denat gel comigration in non denaturing gel electrophoresis comig non denat gel ms participant Identification by mass spectrometry ms participant Battchikova N., Zhang P., Rudd S., Ogawa T., Aro EM. Cyanobacteria - Interaction dataset based on Cyanobacteria proteins and related species Membrane protein complexes from synechocystis sp. PCC 6803 cells were first separated by blue native (BN)-PAGE. To resolve complex composition, the proteins were then separated by denaturing SDS-PAGE and the silver-stained spots were identify by mass spectrometry (MALDI-TOFF MS and ESI-MS/MS). Some bands were previously identified in Herranen et al. PMID:14730074. fig 1, table 1 evaaro@utu.fi J. Biol. Chem. (0021-9258) 2005 atpa_syny3 ATP synthase subunit alpha ATP synthase F1 sector subunit alpha atpA sll1326 F-ATPase subunit alpha protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MVSIRPDEISSIIRQQIESYDQSVQVSNVGTVLQVGDGTARIYGLEQVMSQELLEFEDGTIGIALNLEEDNVGAVLMGDGFGIQEGSTVKTTGQIAQIPIGDAMVGRVVDSLGRPIDGKGPISSTATRLLESPAPGIIERKSVCEPMQTGITAIDAMIPIGRGQRELIIGDRKTGKTAIAIDTIINQKSEDVICVYVAIGQKASTVAQIIDTLTEKGAMAYTIVVAANANDPATLQYLAPYTGATLAEHFMYQGKSTLVIYDDLSKQAQAYRQMSLLMRRPPGREAYPGDVFYIHSRLLERAAKLSDALGGGSMTALPVIETQAGDVSAYIPTNVISITDGQIFLSTDLFNAGFRPAINAGISVSRVGSAAQTKAMKKVAGKLKLELAQFAELEAFSQFASDLDAATQAQLARGQRLRQLLKQPENSPLSVWEQVAISYAGLNGYIDTIPVDKVTEFAQGLRDYLKANKAKYVEIINSSKALTDEAETLLKEGIKEFTQGFAA 98738E1339E0ABE5 psbc_syny3 Photosystem II CP43 reaction center protein PSII 43 kDa protein Protein CP-43 psbC sll0851 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MVTLSNTSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLISSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAMFFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWIGLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSEFYGPTGMEASQSQAFTFLVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLDKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYVSPRAWLATSHFVLGFFFLVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD 06D59598F4B487DF psal_syny3 Photosystem I reaction center subunit XI PSI-L PSI subunit V psaL slr1655 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MAESNQVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTFQGEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLLENLSVVDGIFRGLFN B4EED401E2DF58FC psad_syny3 Photosystem I reaction center subunit II Photosystem I 16 kDa polypeptide psaD slr0737 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTELSGQPPKFGGSTGGLLSKANREEKYAITWTSASEQVFEMPTGGAAIMNEGENLLYLARKEQCLALGTQLRTKFKPKIQDYKIYRVYPSGEVQYLHPADGVFPEKVNEGREAQGTKTRRIGQNPEPVTIKFSGKAPYEV 263C4B64A5F3F0B7 nu2c_syny3 NAD(P)H-quinone oxidoreductase subunit 2 NAD(P)H dehydrogenase subunit 2 NADH-plastoquinone oxidoreductase subunit 2 ndhB sll0223 NDH-1, subunit 2 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MDFSSNVAAQLNAGTILPEGIVIVTLLLVLIVDLIGGRKVALALPYLAIAGLLVSVGLLVTSWSMADPIGFIGAFNGDNLSIIFRAIIALSTVVTILMSVRYVQQTGTSLAEFIAILLTATLGGMFLSAANELVMVFISLEMLSISSYLMTGYMKRDPRSNEAALKYLLIGASSSAIFLYGLSLLYGLSGGETQLVLIAEKLVNADTVGQSLGLAIALVFVIAGIAFKISAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFAVAIRLLVTAFGGITDEWHVIFTALAVLSMVLGNVVALAQTSMKRMLAYSSIGQAGFVMIGLVAGSEDGYASMVFYMLIYLFMNLGAFSCIILFTLRTGSDQISDYAGLYHKDPLLTLGLSICLLSLGGIPPLAGFFGKIYIFWAGWQSGLYGLVLLGLVTSVVSIYYYIRVVKMMVVKEPQEMSEVIKNYPAIKWNLPGMRPLQVGIVATLVATSLAGILANPLFNLATDSVVSTKMLQTALQQTGETPAIAISHDLP C18C06704C277081 ndhi_syny3 NAD(P)H-quinone oxidoreductase subunit I NAD(P)H dehydrogenase I subunit I NDH-1 subunit I ndhI sll0520 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MFNNILKQVGDYAKESLQAAKYIGQGLAVTFDHMSRRPITVQYPYEKLIPSERFRGRIHFEFDKCIACEVCVRVCPINLPVVDWEFNKAVKKKELKHYSIDFGVCIFCGNCVEYCPTNCLSMTEEYELAAYDRHDLNYDNVALGRLPYKVTEDPMVTPLRELGYLPKGVIEPHNLPKGSQRAGQHPEDLVKAE C67389694E391B0E psaa_syny3 Photosystem I P700 chlorophyll a apoprotein A1 psaA slr1834 PsaA protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTISPPEREAKAKVSVDNNPVPTSFEKWGKPGHFDRTLARGPKTTTWIWNLHANAHDFDSQTSDLEDVSRKIFSAHFGHLAVVFVWLSGMYFHGAKFSNYEGWLADPTHIKPSAQVVWPIVGQGILNGDVGGGFHGIQITSGLFYLWRASGFTDSYQLYCTAIGGLVMAALMLFAGWFHYHVKAPKLEWFQNVESMMNHHLAGLLGLGSLGWAGHQIHVSMPINKLLDAGVAPKDIPLPHEFILEPSKMAELYPSFAQGLTPFFTLNWGVYSDFLTFKGGLNPVTGGLWLSDTAHHHLAIAVLFIIAGHMYRTNWGIGHSMKEILEAHKGPFTGEGHKGLYEILTTSWHAQLAINLALLGSLTIIVAQHMYAMPPYPYQAIDYATQLSLFTHHMWIGGFLIVGAGAHGAIFMVRDYDPAKNVNNLLDRMLRHRDAIISHLNWVCIFLGFHSFGLYIHNDTMRALGRPQDMFSDTAIQLQPIFAQWVQHLHTLAPGATAPNALATASYAFGGETIAVAGKVAMMPITLGTADFMVHHIHAFTIHVTALILLKGVLYARSSRLVPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSLSIVIFHFSWKMQSDVWGTVSPDGSVTHVTLGNFAQSAITINGWLRDFLWAQAANVINSYGSALSAYGIMFLAGHFVFAFSLMFLFSGRGYWQELIESIVWAHNKLNVAPAIQPRALSIIQGRAVGVAHYLLGGIVTTWAFFLARSLSIG E4B9A4B7754AA6E7 atpf2_syny3 ATP synthase subunit b' atpF2 ATP synthase F(0) sector subunit b' ATPase subunit II F-type ATPase subunit b' atpG sll1323 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MFDFDATLPLMALQFVVLAFLLNAIFYKPMNKVLDERADYIRTNEEDARERLAKAKAITQEYEQQITDARRQSQAVIADAQAEARRLAAEKIAEAQRESQRQKETAAQEIEAQRQSALSSLEQEVAALSNQILHKLLGPELIK A46B75F5B64A02CC nu4lc_syny3 NAD(P)H-quinone oxidoreductase subunit 4L NAD(P)H dehydrogenase subunit 4L NADH-plastoquinone oxidoreductase subunit 4L ndhE sll0522 NDH-1, subunit 4L NDH-E protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MHLQLQYCLILAAALFCIGIYGLITSRNAVRVLMSIELLLNAVNLNLMGFSNYLDPSNIRGQVFAIFVITIAAAEAAVGLAIVLAIYRNRETTDMEQFNLLKW FD472DB5F7310315 psaf_syny3 Photosystem I reaction center subunit III PSI-F psaF sll0819 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MKHLLALLLAFTLWFNFAPSASADDFANLTPCSENPAYLAKSKNFLNTTNDPNSGKIRAERYASALCGPEGYPHLIVDGRFTHAGDFLIPSILFLYIAGWIGWVGRSYLIEIRESKNPEMQEVVINVPLAIKKMLGGFLWPLAAVGEYTSGKLVMKDSEIPTSPR 9DD84F6B87E72151 nu1c_syny3 NAD(P)H-quinone oxidoreductase subunit 1 NAD(P)H dehydrogenase I subunit 1 NDH-1 subunit 1 NDH-A ndhA sll0519 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTSGIDLQNSFLQSLQGFGLPPGLAKLFWIPLPSILMIIGATVGVLVVVWLERKISAAAQQRIGPEYAGPLGVLQPVADGIKLVFKEDVVPAKADPWLFTLGPVLVVLPVFLSYLIVPFGQNLVITDINVGIFLWIALSSIAPIGLLMSGYASNNKYSLLGGLRAAAQSISYEIPLSLAVLAIVMMSNSLSTIDIVDQQSGYGILGWNIWRQPVGFLIFWIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGSYVNLVLSALVFSVLYLGGWDFPIPLENVANWLGVAPTTSWLQVLMAALGITMTVLKSYFLIFIAILLRWTVPRVRIDQLLNLGWKFLLPVALANLLITAALKLTFPMAFGG 4D9E02576825E990 ndhm_syny3 NAD(P)H-quinone oxidoreductase subunit M slr1623 ndhM NAD(P)H dehydrogenase I subunit M protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MLVKSTTRHVRIFSAEVQGNELIPSNNVLTMDVDPDNEFVWNEDALQQVYRRFDELVESYSGEDLTDYNLRRIGSDLEHFIRDLLQAGKVSYNLDCRVLNYSMGLPKVENQETAGKYWLDN 857E12852DE8656A atpf_syny3 ATP synthase subunit b atpF sll1324 ATPase subunit I ATP synthase F(0) sector subunit b F-type ATPase subunit b protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MLNTLFILAAEAHEAGEGGFGINLDFLEANLFNLAILLGIIIYYAPKTLGKILGDRRQKIADAIEEAETRQRKSAQILAEEEKKLAQAKAEAARIVQEAGQRAEVAKQEIATQTEADLRRMQEAAAQDLGAEQERVIAELKRRIAEQAVAKAEADLRDRLNEDTQDRLIERSIAQLGGR BC29BF18949F169D psab_syny3 Photosystem I P700 chlorophyll a apoprotein A2 PsaB psaB slr1835 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MATKFPKFSQDLAQDPTTRRIWYGIATAHDFETHDGMTEENLYQKIFASHFGHIAIIFLWTSGTLFHVAWQGNFEQWIKDPLNIRPIAHAIWDPHFGEGAVNAFTQAGASNPVNIAYSGVYHWFYTIGMTTNQELYSGAVFLLVLASLFLFAGWLHLQPKFRPSLAWFKNAESRLNHHLAGLFGVSSLAWAGHLVHVAIPEARGQHVGWDNFLSTPPHPAGLMPFFTGNWGVYAADPDTAGHIFGTSEGAGTAILTFLGGFHPQTESLWLTDIAHHHLAIAVIFIIAGHMYRTNWGIGHSIKEILNAHKGPLTGAGHTNLYDTINNSLHFQLGLALASLGVITSLVAQHMYSLPSYAFIAQDHTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPVANKDNVLARMLEHKEALISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQWIQATSGKALYGFDVLLSNPDSIASTTGAAWLPGWLDAINSGTNSLFLTIGPGDFLVHHAIALGLHTTALILIKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAMFWMLNTLGWLTFYWHWKHLGVWSGNVAQFNENSTYLMGWFRDYLWANSAQLINGYNPYGVNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETIVWAHERTPLANLVRWKDKPVALSIVQARLVGLAHFTVGYVLTYAAFLIASTAGKFG BEED6B43CC5B3DD9 ndho_syny3 NAD(P)H-quinone oxidoreductase subunit O ssl1690 ndhO NAD(P)H dehydrogenase I subunit O NDH-1 subunit O NDH-O protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MAAKMKKGSLVRVIRAQLENSLEAQASDRRLPDYLFHSKGEVLDLNEEYALVRFYVPTPNVWLRLDQIEALA 57B91A6F10B29610 ndhn_syny3 NAD(P)H-quinone oxidoreductase subunit N sll1262 ndhN NAD(P)H dehydrogenase I subunit N protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MLPLPLIANGKGFIRALENDGALAVYAPLEGGYEGRYQRRLRANGYASISLSARGLGDVEAYLMQVHGVRPAHLGKKNIAQEGAVGPIYFAQPIAGYQLENLPAQSKGLVLWILEGYILSQTEIQDLISLTKRVPKLKVVLEMGGDRVFRWQPLLDCLQAA 92E8953D18192973 atpb_syny3 ATP synthase subunit beta ATP synthase F1 sector subunit beta atpD atpB slr1329 F-ATPase subunit beta protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MVAVKEATNVGKITQVIGPVIDAQFPSGKLPRIYNALKVQGRNSAGNEVAVTCEVQQLLGDNQVRAVAMSSTDGLVRGMDVVDTGAPISVPVGTGTLGRIFNVLGEPVDNKGPVPAGETFPIHRPAPKLVDLETKPQVFETGIKVIDLLTPYRQGGKIGLFGGAGVGKTVIMMELINNIAIQHGGVSVFGGVGERTREGNDLYNEMIESNVINADKPEESKIALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGDLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDGTTVLSRGLAAKGIYPAVDPLDSTSTMLQPSIVGSEHYDTAREVQSTLQRYKELQDIIAILGLDELSEEDRLTVDRARKIERFLSQPFFVAEVFTGAPGKYVSLADTIKGFKAILAGELDDLPEQAFYLVGDIEEAKAKGAKLKEG 106735D6E4045737 ndhl_syny3 NAD(P)H-quinone oxidoreductase subunit L ndhL ssr1386 ictA NAD(P)H dehydrogenase I subunit L NDH-1 subunit L NDH-L Inorganic carbon transport protein protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MEDLLGLLLSETGLLAIIYLGLSLAYLLVFPALLYWYLQKRWYVASSVERLVMYFLVFLFFPGLLVLSPVLNLRPRRQAA 311AD10FA3B6136D nu4c1_syny3 NAD(P)H-quinone oxidoreductase chain 4-1 NAD(P)H dehydrogenase I, subunit D-1 NDH-1, chain 4-1 ndhD1 ndhD slr0331 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MNTFPWLTTIILLPIVAALFIPIIPDKDGKTVRWYSLAVGLVDFALIVYAFYSGFDLSEPGLQLVESYTWLPQIDLKWSVGADGLSMPLIILTGFITTLATMAAWPVTLKPKLFYFLMLLMYGGQIAVFAVQDILLFFLVWELELVPVYLILSIWGGKKRLYAATKFILYTAGGSLFILLAGLTLAFYGDVNTFDMSAIAAKDIPVNLQLLLYAGFLIAYGVKLPIFPLHTWLPDAHGEATAPAHMLLAGILLKMGGYALLRMNVGMLPDAHAVFAPVLVILGVVNIIYAAFTSFAQRNLKRKIAYSSISHMGFVLIGLASFTDLGMSGAMLQMISHGLIGASLFFMVGATYDRTHTLMLDEMGGIGQKMKKGFAMWTACSLASLALPGMSGFVAELMVFVGFATSDAYNLVFRTIVVVLMGVGVILTPIYLLSMLREMLYGPENEELVNHTNLVDVEPREVFIIGCLLVPIIGIGFYPKLITQIYDPTINQLVQTARRSVPSLVQQANLSPLEVTALRPPTIGF CC478354466E7DF9 psbb_syny3 Photosystem II CP47 reaction center protein Protein CP-47 psbB slr0906 PSII 47 kDa protein protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MGLPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAIFDSSDAVLNPMWRQGMFVLPFMARLGVTSSWNGWSVTGETGLDPGFWSFEGVAAAHIVLSGLLFLAAVWHWVFWDLELFVDPRTGESALDLPKMFGIHLFLSGLLCFGFGAFHLTGVWGPGMWVSDPYGLTGHVQPVAPEWGPAGFNPFNPGGVVAHHIAAGIVGIIAGLFHLTVRPPERLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGNATTPIELFGPTRYQWDKGYFQEEIQRRVDSQLAEGASLSEAWSTIPEKLAFYDYVGNSPAKGGLFRTGAMNSGDGIAQEWIGHPIFKDKEGRELEVRRMPNFFETFPVIMTDADGVVRADIPFRRSESKFSVEQTGVTVSFYGGALDGQTFSNPSDVKKFARKAQLGEGFDFDTETFNSDGVFRTSPRGWFTFGHAVFALLFFFGHIWHGSRTLFRDVFAGVDPGLEEQVEFGVFAKVGDLSTRKEA EBB31380BED9F68A nu6c_syny3 NAD(P)H-quinone oxidoreductase chain 6 NAD(P)H dehydrogenase I, chain 6 NDH-1, chain 6 ndhG sll0521 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MNLAEGVQYISFLILAFLVIGAALGVVLLSNIVYSAFLLGGVFLSISGIYILLNADFVAAAQVLVYVGAVSVLILFAIMLVNKREDFSKIPGRWLRNVSTALVCTGIFALLSTMVLITPWQINETGPFVENTLVTIGKHFFSDYLLPFELASVLLLMAMVGAIILARRDLIPELSEENKTATALTLPERPRELTSASK A92685FB148C5FEE nu5c_syny3 NAD(P)H-quinone oxidoreductase chain 5 NAD(P)H dehydrogenase I, chain 5 NDH-1, chain 5 ndhF slr0844 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MELLYQLAWLIPVLPLFGATVVGIGLISFNQATNKLRQINAVFIISCLGAALVMSGALLWDQIQGHASYAQMIEWASAGSFHLEMGYVIDHLSALMLVIVTSVALLVMIYTDGYMAHDPGYVRFYAYLSLFASSMLGLVISPNLVQVYIFWELVGMCSYLLIGFWYDRKAAADACQKAFVTNRVGDFGLLLGILGLYWATGSFDFGTIGERLEGLVSSGVLSGAIAAILAILVFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEPIPVVMNTIAFTGCFTAFLGATIALTQNDIKKGLAYSTISQLGYMVMAMGIGAYSAGLFHLMTHAYFKAMLFLCSGSVIHGMEGVVGHDPILAQDMRIMGGLRKYMPITATCFLIGTLAICGIPPFAGFWSKDEILGLAFQANPLLWFVGWATAGMTAFYMFRMYFMTFEGGFRGNDQEAKDGVLQFYGLLPNFGPGAMNVKELDHEAGHDDHGHSSEPHESPLTMTFPLMALAVPSVLIGLLGRPWANQFEAFIHAPGEVVEHAAEFEWGEFYVMAGNSIGIALIGITVASLMYWQHKFDPKVLAEKFPSLYQLSLNKWYFDDLYDKLFVQGSRRVARQIMEVDYKVIDGAVNLTGLVTLVSGEGLKYLENGRAQFYALIVFGAVLGFVIVFSLT D110C883B722FDAE psba2_syny3 Photosystem II protein D1 2 psbA2 psbA-2 slr1311 psbA3 psbA-3 sll1867 Photosystem II Q(B) protein 2 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFLIGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGFNFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAVNG 2FE4088498A416C2 psbd_syny3 Photosystem II D2 protein Photosystem Q(A) protein psbD sll0849 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTIAVGRAPVERGWFDVLDDWLKRDRFVFIGWSGLLLFPCAFMALGGWLTGTTFVTSWYTHGLASSYLEGANFLTVAVSSPADAFGHSLLFLWGPEAQGNLTRWFQIGGLWPFVALHGAFGLIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVAGIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFEDGEDSNTFRAFEPTQAEETYSMVTANRFWSQIFGIAFSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNLRAYDFVSQELRAAEDPEFETFYTKNILLNEGMRAWMAPQDQPHENFIFPEEVLPRGNAL 38707947A4A5E243 ndhk1_syny3 NAD(P)H-quinone oxidoreductase subunit K 1 ndhK1 NAD(P)H dehydrogenase I subunit K 1 NDH-1 subunit K 1 psbG slr1280 protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MSPNPANPTDLERVATAKILNPASRSQVTQDLSENVILTTVDDLYNWAKLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLIITAGTITMKMAPALVRLYEEMPEPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYIPGCPPRPEAIFDAIIKLRKKVANESIQERAITQQTHRYYSTSHQMKVVAPILDGKYLQQGTRSAPPRELQEAMGMPVPPALTTSQQKEQLNRG FF68BEA64B92F6E7 ndhj_syny3 NAD(P)H-quinone oxidoreductase subunit J NAD(P)H dehydrogenase subunit J NADH-plastoquinone oxidoreductase subunit J ORF 155 ndhJ slr1281 NDH-1 subunit J protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MAEEVNSPNEAVNLQEETAIAPVGPVSTWLTTNGFEHQSLTADHLGVEMVQVEADLLLPLCTALYAYGFNYLQCQGAYDEGPGKSLVSFYHLVKLTEDTRNPEEVRLKVFLPRENPVVPSVYWIWKAADWQERECYDMFGIVYEGHPNLKRILMPEDWVGWPLRKDYISPDFYELQDAY 3EE18D5E727F8BCC ndhh_syny3 NAD(P)H-quinone oxidoreductase subunit H NAD(P)H dehydrogenase subunit H NADH-plastoquinone oxidoreductase subunit H ndhH slr0261 NDH-1 subunit H protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTKIETRTEPMVLNMGPHHPSMHGVLRLIVTLDGEDVVDCEPVIGYLHRGMEKIAESRTNIMYVPYVSRWDYAAGMFNEAITVNAPEKLADIEVPKRAQYIRVIMLELNRIANHLLWLGPFMADVGAQTPFFYIFREREMIYDLWEAASGMRLINNNYFRVGGVAVDLPYGWNDKCEDFCDYFLPKVDEYEKLITNNPIFRRRVEGVGTVTREEAINWGLSGPMLRGSGVKWDLRKVDHYECYDELDWEVQYETAGDCFARYLVRIREMRESVKIIRQALKAMPGGPYENLEAKRLQEGKKSEWNDFQYQYIAKKVAPTFKIPAGEHYVRLESGKGELGIFIQGNDDVFPWRWKIRSADFNNLQILPHILKGVKVADIMAILGSIDIIMGSVDR C75A5CBDB502391F atpe_syny3 ATP synthase epsilon chain ATP synthase F1 sector epsilon subunit atpC atpE slr1330 F-ATPase epsilon subunit protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MTLTVRVITPDKVVWDEEVQELILPSTTGQLGILSNHAPLLTALEIGVMRVRPGKDWQNIAVMGGFAEVENNEVKVLVNGAELGTTIDAESARQAYTAAQGALEEANRGEDKPNQLKASNNYKKARARLQAAGGAV 55B8F3545DC23E72 atpg_syny3 ATP synthase gamma chain ATP synthase F1 sector gamma subunit atpG atpC sll1327 F-ATPase gamma subunit protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MPNLKAIRDRIQSVKNTKKITEAMRLVAAAKVRRAQEQVLSTRPFADALAQVLYNLQNRLSFAETELPLFEQREPKAVALLVVTGDRGLCGGYNVNAIKRAEQRAKELKNQGIAVKLVLVGSKAKQYFGRRDYDVAASYANLEQIPNASEAAQIADSLVALFVSETVDRVELIYTRFVSLISSQPVVQTLFPLSPQGLEAPDDEIFRLITRGGKFQVEREKVEAPVESFPQDMIFEQDPVQILEALLPLYNTNQLLRALQESAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQELLEVVAGANSL B82195D6F692C111 atpd_syny3 ATP synthase subunit delta atpH atpD sll1325 ATP synthase F(1) sector subunit delta F-type ATPase subunit delta protein protein syny3 Synechocystis sp. (strain PCC 6803 / Kazusa) MKGSLYSSKIAEPYAQALIGLAQQQNLTEVFGDNLRSLLTLLQDSPDLSAVLSSPVVKDEDKKSVLRSVLGDGGNGYLLNFLMLLVDKRRIVFLEAICEQYLALLRQFTNTVLAEVTSALKLTDAQKDQVKERVKQLTGAQAVELETKVDGDILGGIVIKVGSQVFDSSLRGQLRRVGLSLGTAL F77D9DB601A17F12 atpa-atpf-2 1 18 unspecified role unspecified role neutral component neutral component 14 unspecified role unspecified role neutral component neutral component 31 unspecified role unspecified role neutral component neutral component 29 unspecified role unspecified role neutral component neutral component 9 unspecified role unspecified role neutral component neutral component 2 unspecified role unspecified role neutral component neutral component 30 unspecified role unspecified role neutral component neutral component physical association physical association psaa-psab-3 1 4 unspecified role unspecified role neutral component neutral component 5 unspecified role unspecified role neutral component neutral component 15 unspecified role unspecified role neutral component neutral component 11 unspecified role unspecified role neutral component neutral component 8 unspecified role unspecified role neutral component neutral component physical association physical association psbb-psbc-3 1 3 unspecified role unspecified role neutral component neutral component 25 unspecified role unspecified role neutral component neutral component 24 unspecified role unspecified role neutral component neutral component 21 unspecified role unspecified role neutral component neutral component physical association physical association Most subunits of PSII failed to be identified ndhh-ndhk-3 1 16 unspecified role unspecified role neutral component neutral component 19 unspecified role unspecified role neutral component neutral component 13 unspecified role unspecified role neutral component neutral component 17 unspecified role unspecified role neutral component neutral component 10 unspecified role unspecified role neutral component neutral component 12 unspecified role unspecified role neutral component neutral component 22 unspecified role unspecified role neutral component neutral component 6 unspecified role unspecified role neutral component neutral component 28 unspecified role unspecified role neutral component neutral component 7 unspecified role unspecified role neutral component neutral component 27 unspecified role unspecified role neutral component neutral component 26 unspecified role unspecified role neutral component neutral component physical association physical association Based on their migration, four NDH-1 complexes were denoted : NDH-1L (large), NDH-1M (medium size), NDH-1S1 (small 1) and NDH-1S2 (small 2). In WT cells grown in high CO2 (3%) the relative amount of NDH1-M drastically decreased NdhD1 and NdhF1 present in NDH1-L complex are not detected in the NDH1-M complex. The others proteins are present in both complexes. In delta ndhB strain, NDH1-M and NDH1-L complexes are absent and none of the spots found in WT strains was detected demonstrating that all the proteins belonged to the NDH1 complexes. The abondant NFH1-M complex was the characteristic feature of cells grown photoautrophically under air level of CO2. Weight about 350 kDa ndhh-ndhk-4 1 20 unspecified role unspecified role neutral component neutral component 23 unspecified role unspecified role neutral component neutral component 12 unspecified role unspecified role neutral component neutral component 13 unspecified role unspecified role neutral component neutral component 22 unspecified role unspecified role neutral component neutral component 6 unspecified role unspecified role neutral component neutral component 16 unspecified role unspecified role neutral component neutral component 17 unspecified role unspecified role neutral component neutral component 19 unspecified role unspecified role neutral component neutral component 10 unspecified role unspecified role neutral component neutral component 7 unspecified role unspecified role neutral component neutral component 27 unspecified role unspecified role neutral component neutral component 26 unspecified role unspecified role neutral component neutral component 28 unspecified role unspecified role neutral component neutral component physical association physical association Based on their migration, four NDH-1 complexes were denoted : NDH-1L (large), NDH-1M (medium size), NDH-1S1 (small 1) and NDH-1S2 (small 2). NdhD1 and NdhF1 are not present in the NDH1-M complex. The others proteins are present in both complexes. In delta ndhB strain, NDH1-M and NDH1-L complexes are absent and none of the spots found in WT strains was detected demonstrating that all the proteins belonged to the NDH1 complexes. NDH1-L is slightly up-regulated in high CO2-grown cells. Weight about 490 kDa