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  <entry>
    <source releaseDate="2022-02-04">
      <names>
        <shortLabel>IntAct</shortLabel>
        <fullName>European Bioinformatics Institute</fullName>
        <alias type="synonym" typeAc="MI:1041">IntAct</alias>
        <alias type="synonym" typeAc="MI:1041">intact</alias>
      </names>
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      <attributeList>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/</attribute>
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        <attribute name="id-validation-regexp" nameAc="MI:0628">EBI-[0-9]+|IA:[0-9]+</attribute>
        <attribute name="definition">INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions.</attribute>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/intact</attribute>
        <attribute name="postaladdress">European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom</attribute>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/intact/</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Structure of SARS-CoV-2 main protease in 1 the apo state reveals the&#xd;
2 inactive conformation</fullName>
        </names>
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          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Structure of SARS-CoV-2 main protease in 1 the apo state reveals the&#xd;
2 inactive conformation</attribute>
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            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Xuelan Zhou, Fangling Zhong, Cheng Lin, Xiaohui Hu, Yan Zhang, Bing Xiong, Xiushan Yin, Jinheng Fu, Wei He, Jingjing Duan, Yang Fu, Huan Zhou, Qisheng Wang, Jian Li, Jin Zhang</attribute>
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            <attribute name="dataset" nameAc="MI:0875">Coronavirus - Interactions investigated in the context of Coronavirus</attribute>
            <attribute name="caution" nameAc="MI:0618">This entry has been curated from a pre-print and has not been peer-reviewed. If needed, the data in this entry will be amended once the manuscript has gone through peer-review</attribute>
            <attribute name="contact-email" nameAc="MI:0634">zhangxiaokong@hotmail.com,rmsl_2040@163.com,wangqisheng@zjlab.org.cn</attribute>
            <attribute name="author-announcement">28-Sep-2020: Contacted by IntAct-Help.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959">imex curation</attribute>
          </attributeList>
        </bibref>
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        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="83333">
            <names>
              <shortLabel>ecoli</shortLabel>
              <fullName>Escherichia coli (strain K12)</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>x-ray diffraction</shortLabel>
            <fullName>x-ray crystallography</fullName>
            <alias type="go synonym" typeAc="MI:0303">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">X-ray</alias>
            <alias type="synonym" typeAc="MI:1041">x-ray diffraction</alias>
          </names>
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        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>predetermined</shortLabel>
            <fullName>predetermined participant</fullName>
            <alias type="synonym" typeAc="MI:1041">predetermined</alias>
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          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0396" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Xuelan Zhou, Fangling Zhong, Cheng Lin, Xiaohui Hu, Yan Zhang, Bing Xiong, Xiushan Yin, Jinheng Fu, Wei He, Jingjing Duan, Yang Fu, Huan Zhou, Qisheng Wang, Jian Li, Jin Zhang</attribute>
          <attribute name="dataset" nameAc="MI:0875">Virus - Publications including interactions involving viral proteins</attribute>
          <attribute name="caution" nameAc="MI:0618">This entry has been curated from a pre-print and has not been peer-reviewed. If needed, the data in this entry will be amended once the manuscript has gone through peer-review</attribute>
          <attribute name="contact-email" nameAc="MI:0634">zhangxiaokong@hotmail.com,rmsl_2040@163.com,wangqisheng@zjlab.org.cn</attribute>
          <attribute name="accepted">Accepted 2020-AUG-27 AT 11:03 BST AT 11:03 BST by LUANA</attribute>
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          <attribute name="imex curation" nameAc="MI:0959">imex curation</attribute>
          <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>p0dtd1-pro_0000449623</shortLabel>
          <fullName>3C-like proteinase nsp5</fullName>
          <alias type="gene name" typeAc="MI:0301">rep</alias>
          <alias type="gene name synonym" typeAc="MI:0302">ORF1ab polyprotein</alias>
          <alias type="orf name" typeAc="MI:0306">1a-1b</alias>
        </names>
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        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
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        </interactorType>
        <organism ncbiTaxId="2697049">
          <names>
            <shortLabel>SARS-CoV-2</shortLabel>
            <fullName>SARS-CoV-2</fullName>
            <alias type="synonym" typeAc="MI:1041">SARS-CoV-2</alias>
            <alias type="synonym" typeAc="MI:1041">Severe acute respiratory syndrome coronavirus 2</alias>
            <alias type="synonym" typeAc="MI:1041">2019-nCoV</alias>
          </names>
        </organism>
        <sequence>SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ</sequence>
        <attributeList>
          <attribute name="chain-seq-start">3264</attribute>
          <attribute name="chain-seq-end">3569</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="3" imexId="IM-28292-1">
        <names>
          <shortLabel>rep-115</shortLabel>
        </names>
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          <primaryRef db="pdbe" dbAc="MI:0472" id="7C2Q" refType="identity" refTypeAc="MI:0356"/>
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        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="4">
            <interactorRef>2</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
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            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
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                  <shortLabel>neutral component</shortLabel>
                  <fullName>neutral component</fullName>
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              </experimentalRole>
            </experimentalRoleList>
            <experimentalPreparationList>
              <experimentalPreparation>
                <names>
                  <shortLabel>purified</shortLabel>
                  <fullName>purified</fullName>
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              <feature id="5">
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                  <shortLabel>n-terminus</shortLabel>
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                <featureType>
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                    <shortLabel>his tag</shortLabel>
                    <fullName>his tag</fullName>
                    <alias type="go synonym" typeAc="MI:0303">Hexa-His-tag</alias>
                    <alias type="go synonym" typeAc="MI:0303">6-His-tag</alias>
                    <alias type="go synonym" typeAc="MI:0303">Histidine-tag</alias>
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                <featureRangeList>
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                    <startStatus>
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                        <fullName>n-terminal range</fullName>
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              </feature>
              <feature id="6">
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                  <shortLabel>c-terminus</shortLabel>
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                    <fullName>his tag</fullName>
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                    <startStatus>
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                        <fullName>C-terminal range</fullName>
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              </feature>
            </featureList>
            <stoichiometry value="2"/>
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        </participantList>
        <interactionType>
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            <shortLabel>direct interaction</shortLabel>
            <fullName>direct interaction</fullName>
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            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
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        </interactionType>
        <attributeList>
          <attribute name="figure legend" nameAc="MI:0599">Table 1</attribute>
          <attribute name="3d-resolution" nameAc="MI:0632">1.93Å</attribute>
          <attribute name="3d-r-factors" nameAc="MI:0631">Rwork: 0.23&#xd;
Rfree: 0.27</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
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