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  <entry>
    <source releaseDate="2022-02-03">
      <names>
        <shortLabel>IntAct</shortLabel>
        <fullName>European Bioinformatics Institute</fullName>
        <alias type="synonym" typeAc="MI:1041">IntAct</alias>
        <alias type="synonym" typeAc="MI:1041">intact</alias>
      </names>
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      <attributeList>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/</attribute>
        <attribute name="search-url" nameAc="MI:0615">http://www.ebi.ac.uk/intact/query/${ac}</attribute>
        <attribute name="id-validation-regexp" nameAc="MI:0628">EBI-[0-9]+|IA:[0-9]+</attribute>
        <attribute name="definition">INTerAction database (IntAct) provides an open source database and toolkit for the storage, presentation and analysis of molecular interactions.</attribute>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/intact</attribute>
        <attribute name="postaladdress">European Bioinformatics Institute; Wellcome Trust Genome Campus; Hinxton, Cambridge; CB10 1SD; United Kingdom</attribute>
        <attribute name="url" nameAc="MI:0614">http://www.ebi.ac.uk/intact/</attribute>
      </attributeList>
    </source>
    <experimentList>
      <experimentDescription id="1">
        <names>
          <fullName>Vitamin B6 biosynthesis by the malaria parasite Plasmodium falciparum: biochemical and structural insights.</fullName>
        </names>
        <bibref>
          <xref>
            <primaryRef db="pubmed" dbAc="MI:0446" id="16339145" refType="primary-reference" refTypeAc="MI:0358"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1991337" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="imex" dbAc="MI:0670" id="IM-14413" refType="imex-primary" refTypeAc="MI:0662"/>
          </xref>
          <attributeList>
            <attribute name="publication title" nameAc="MI:1091">Vitamin B6 biosynthesis by the malaria parasite Plasmodium falciparum: biochemical and structural insights.</attribute>
            <attribute name="journal" nameAc="MI:0885">J. Biol. Chem. (0021-9258)</attribute>
            <attribute name="publication year" nameAc="MI:0886">2006</attribute>
            <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
            <attribute name="author-list" nameAc="MI:0636">Gengenbacher M., Fitzpatrick TB., Raschle T., Flicker K., Sinning I., Muller S., Macheroux P., Tews I., Kappes B.</attribute>
            <attribute name="dataset" nameAc="MI:0875">BioCreative - Critical Assessment of Information Extraction systems in Biology</attribute>
            <attribute name="contact-email" nameAc="MI:0634">ivo.tews@bzh.uni-heidelberg.de</attribute>
            <attribute name="author-announcement">24-JAN-2007: Contacted by JYOTI.</attribute>
            <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
            <attribute name="imex curation" nameAc="MI:0959"/>
          </attributeList>
        </bibref>
        <xref>
          <primaryRef db="imex" dbAc="MI:0670" id="IM-14413" refType="imex-primary" refTypeAc="MI:0662"/>
          <secondaryRef db="pubmed" dbAc="MI:0446" id="16339145" refType="primary-reference" refTypeAc="MI:0358"/>
        </xref>
        <hostOrganismList>
          <hostOrganism ncbiTaxId="511693">
            <names>
              <shortLabel>ecobb</shortLabel>
              <fullName>Escherichia coli (strain B / BL21)</fullName>
            </names>
          </hostOrganism>
        </hostOrganismList>
        <interactionDetectionMethod>
          <names>
            <shortLabel>pull down</shortLabel>
            <fullName>pull down</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0096" refType="identity" refTypeAc="MI:0356"/>
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          </xref>
        </interactionDetectionMethod>
        <participantIdentificationMethod>
          <names>
            <shortLabel>western blot</shortLabel>
            <fullName>western blot</fullName>
            <alias type="go synonym" typeAc="MI:0303">Immuno blot</alias>
            <alias type="synonym" typeAc="MI:1041">Immuno blot</alias>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0113" refType="identity" refTypeAc="MI:0356"/>
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        </participantIdentificationMethod>
        <attributeList>
          <attribute name="author-list" nameAc="MI:0636">Gengenbacher M., Fitzpatrick TB., Raschle T., Flicker K., Sinning I., Muller S., Macheroux P., Tews I., Kappes B.</attribute>
          <attribute name="dataset" nameAc="MI:0875">BioCreative - Critical Assessment of Information Extraction systems in Biology</attribute>
          <attribute name="contact-email" nameAc="MI:0634">ivo.tews@bzh.uni-heidelberg.de</attribute>
          <attribute name="contact-email" nameAc="MI:0634">ivo.tews@bzh.uni-heidelberg.de</attribute>
          <attribute name="accepted">Accepted 2006-AUG-2 by DAVET.</attribute>
          <attribute name="journal" nameAc="MI:0885">J. Biol. Chem. (0021-9258)</attribute>
          <attribute name="publication year" nameAc="MI:0886">2006</attribute>
          <attribute name="full coverage" nameAc="MI:0957">Only protein-protein interactions</attribute>
          <attribute name="imex curation" nameAc="MI:0959"/>
          <attribute name="curation depth" nameAc="MI:0955">imex curation</attribute>
        </attributeList>
      </experimentDescription>
    </experimentList>
    <interactorList>
      <interactor id="2">
        <names>
          <shortLabel>pdx1_plaf7</shortLabel>
          <fullName>Pyridoxal 5'-phosphate synthase subunit Pdx1</fullName>
          <alias type="gene name" typeAc="MI:0301">pdx1</alias>
          <alias type="orf name" typeAc="MI:0306">PFF1025c</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="C6KT50" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblprotists" id="CAG25026" version="SP_75" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="intact" dbAc="MI:0469" id="EBI-975011" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="ensemblprotists" id="CAG25026" version="SP_75" refType="transcript"/>
          <secondaryRef db="ensemblprotists" id="PF3D7_0621200" version="SP_75" refType="gene"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0000304" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0003824" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0004359" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005829" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006520" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008615" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0016843" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0036381" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042802" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042819" version="SP_75"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042823" version="SP_75"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR013785"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR011060"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR001852"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="XP_966196.1"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR033755"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
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            <secondaryRef db="so" dbAc="MI:0601" id="SO:0000358" refType="see-also" refTypeAc="MI:0361"/>
          </xref>
        </interactorType>
        <organism ncbiTaxId="36329">
          <names>
            <shortLabel>plaf7</shortLabel>
            <fullName>Plasmodium falciparum (isolate 3D7)</fullName>
          </names>
        </organism>
        <sequence>MENHKDDAVLLKHGWCEMLKGGVIMDVKSVEQAKIAEEAGAIGVMVLENIPSELRNKEGVARSVDPSKVEEIKKCVSINVLAKVRIGHFVEAQILEELKIDMIDESEVLTIADEMHHIDKHKFKTPFVCGCTNLGEALRRISEGASMIRTKGEAGTGNIIEAIKHIRTVNNEIKYLCSLSDSEVYHFAKKINAPIDLVLLTKKLKRLPVVNFAAGGVATPADAAMCMQLGMDGVFVGSGIFESENPRKMAASIVSAVSNFNNPKILLDVSMNLGKAMCGSTRVSDKWKNKNEEHTKFLTPQ</sequence>
        <attributeList>
          <attribute name="crc64">87A2886A215ED219</attribute>
        </attributeList>
      </interactor>
      <interactor id="3">
        <names>
          <shortLabel>pdx2_plaf7</shortLabel>
          <fullName>Pyridoxal 5'-phosphate synthase subunit Pdx2</fullName>
          <alias type="gene name" typeAc="MI:0301">pdx2</alias>
          <alias type="gene name synonym" typeAc="MI:0302">Pyridoxal 5'-phosphate synthase glutaminase subunit</alias>
          <alias type="orf name" typeAc="MI:0306">PF11_0169</alias>
        </names>
        <xref>
          <primaryRef db="uniprotkb" dbAc="MI:0486" id="Q8IIK4" version="SP_62" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="uniprotkb" dbAc="MI:0486" id="Q5ND68" version="SP_62" refType="secondary-ac" refTypeAc="MI:0360"/>
          <secondaryRef db="ensemblprotists" id="CZT98823" version="SP_93" refType="identity" refTypeAc="MI:0356"/>
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          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR002161"/>
          <secondaryRef db="interpro" dbAc="MI:0449" id="IPR021196"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="2ABW"/>
          <secondaryRef db="refseq" dbAc="MI:0481" id="XP_001347840.2"/>
          <secondaryRef db="rcsb pdb" dbAc="MI:0460" id="4ADS"/>
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          <secondaryRef db="go" dbAc="MI:0448" id="GO:0004359" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0005829" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0006541" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0008614" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0036381" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042819" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:0042823" version="SP_93"/>
          <secondaryRef db="go" dbAc="MI:0448" id="GO:1903600" version="SP_93"/>
        </xref>
        <interactorType>
          <names>
            <shortLabel>protein</shortLabel>
            <fullName>protein</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0326" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-619654" refType="identity" refTypeAc="MI:0356"/>
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          </xref>
        </interactorType>
        <organism ncbiTaxId="36329">
          <names>
            <shortLabel>plaf7</shortLabel>
            <fullName>Plasmodium falciparum (isolate 3D7)</fullName>
          </names>
        </organism>
        <sequence>MSEITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGLDITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIREILSDEVKVLATFSHESYGPNIIAAVEQNNCLGTVFHPELLPHTAFQQYFYEKVKNYKYS</sequence>
        <attributeList>
          <attribute name="crc64">21636561DFBCB136</attribute>
        </attributeList>
      </interactor>
    </interactorList>
    <interactionList>
      <interaction id="4" imexId="IM-14413-1">
        <names>
          <shortLabel>pdx1-pdx2-1</shortLabel>
        </names>
        <xref>
          <primaryRef db="intact" dbAc="MI:0469" id="EBI-975047" refType="identity" refTypeAc="MI:0356"/>
          <secondaryRef db="psi-mi" dbAc="MI:0488" id="MI:0469" refType="imex source"/>
          <secondaryRef db="imex" dbAc="MI:0670" id="IM-14413-1" refType="imex-primary" refTypeAc="MI:0662"/>
        </xref>
        <experimentList>
          <experimentRef>1</experimentRef>
        </experimentList>
        <participantList>
          <participant id="5">
            <interactorRef>3</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>bait</shortLabel>
                  <fullName>bait</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0496" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-49" refType="identity" refTypeAc="MI:0356"/>
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              </experimentalRole>
            </experimentalRoleList>
            <featureList>
              <feature id="6">
                <names>
                  <shortLabel>region</shortLabel>
                </names>
                <xref>
                  <primaryRef db="intact" dbAc="MI:0469" id="EBI-1187639" refType="identity" refTypeAc="MI:0356"/>
                </xref>
                <featureType>
                  <names>
                    <shortLabel>his tag</shortLabel>
                    <fullName>his tag</fullName>
                    <alias type="go synonym" typeAc="MI:0303">Hexa-His-tag</alias>
                    <alias type="go synonym" typeAc="MI:0303">6-His-tag</alias>
                    <alias type="go synonym" typeAc="MI:0303">Histidine-tag</alias>
                    <alias type="synonym" typeAc="MI:1041">Hexa-His-tag</alias>
                    <alias type="synonym" typeAc="MI:1041">Histidine-tag</alias>
                    <alias type="synonym" typeAc="MI:1041">6-His-tag</alias>
                  </names>
                  <xref>
                    <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0521" refType="identity" refTypeAc="MI:0356"/>
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                    <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                  </xref>
                </featureType>
                <featureRangeList>
                  <featureRange>
                    <startStatus>
                      <names>
                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">undetermined</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0339" refType="identity" refTypeAc="MI:0356"/>
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                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </startStatus>
                    <endStatus>
                      <names>
                        <shortLabel>undetermined</shortLabel>
                        <fullName>undetermined sequence position</fullName>
                        <alias type="synonym" typeAc="MI:1041">undetermined</alias>
                      </names>
                      <xref>
                        <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0339" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="intact" dbAc="MI:0469" id="EBI-448295" refType="identity" refTypeAc="MI:0356"/>
                        <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                      </xref>
                    </endStatus>
                  </featureRange>
                </featureRangeList>
              </feature>
            </featureList>
          </participant>
          <participant id="7">
            <interactorRef>2</interactorRef>
            <biologicalRole>
              <names>
                <shortLabel>unspecified role</shortLabel>
                <fullName>unspecified role</fullName>
              </names>
              <xref>
                <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0499" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="intact" dbAc="MI:0469" id="EBI-77781" refType="identity" refTypeAc="MI:0356"/>
                <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
              </xref>
            </biologicalRole>
            <experimentalRoleList>
              <experimentalRole>
                <names>
                  <shortLabel>prey</shortLabel>
                  <fullName>prey</fullName>
                </names>
                <xref>
                  <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0498" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="intact" dbAc="MI:0469" id="EBI-58" refType="identity" refTypeAc="MI:0356"/>
                  <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
                </xref>
              </experimentalRole>
            </experimentalRoleList>
            <stoichiometry value="1"/>
          </participant>
        </participantList>
        <interactionType>
          <names>
            <shortLabel>physical association</shortLabel>
            <fullName>physical association</fullName>
          </names>
          <xref>
            <primaryRef db="psi-mi" dbAc="MI:0488" id="MI:0915" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="intact" dbAc="MI:0469" id="EBI-1813147" refType="identity" refTypeAc="MI:0356"/>
            <secondaryRef db="pubmed" dbAc="MI:0446" id="14755292" refType="primary-reference" refTypeAc="MI:0358"/>
          </xref>
        </interactionType>
        <attributeList>
          <attribute name="remark-internal">Paper is not very clear, but I think they have used strain 3D7 to clone protein.</attribute>
          <attribute name="source-text">The presence of both proteins during the expression and purification procedure was verified by Western blotting using the affinity-purified Pdx1 antibody and a monoclonal His tag antibody for the detection of Pdx2 (Fig. 3B).</attribute>
          <attribute name="figure legend" nameAc="MI:0599">Fig. 3B</attribute>
        </attributeList>
      </interaction>
    </interactionList>
  </entry>
</entrySet>