DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ solomonson-2015-1 ecolx Escherichia coli tem transmission electron microscopy tem predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264814X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-2 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264817X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-3 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264810X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-4 mycsm Mycobacterium smegmatis dhfr reconstruction dihydrofolate reductase reconstruction dhfr reconstruction predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264820X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-5 ecolx Escherichia coli comigration in sds comigration in sds page comigration in sds weight by staining molecular weight estimation by staining weight by staining Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264811X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-6 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264818X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-7 ecolx Escherichia coli crosslink cross-linking study crosslink predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264815X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-8 ecolx Escherichia coli light scattering light scattering predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264812X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-9 ecolx Escherichia coli solution sedimentati cosedimentation in solution solution sedimentati predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264813X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-10 ecolx Escherichia coli crosslink cross-linking study crosslink predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264816X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation solomonson-2015-11 mycsm Mycobacterium smegmatis dhfr reconstruction dihydrofolate reductase reconstruction dhfr reconstruction predetermined predetermined participant predetermined Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. DIP original experiment: DIP-264819X Structure (London, England : 1993) 2015 IMEx Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism. Solomonson M., Setiaputra D., Makepeace KA., Lameignere E., Petrotchenko EV., Conrady DG., Bergeron JR., Vuckovic M., DiMaio F., Borchers CH., Yip CK., Strynadka NC. Only protein-protein interactions imex curation espb_myctu ESX-1 secretion-associated protein EspB espB mtb48 MTV027.16c Rv3881c Antigen MTB48 protein protein myctu Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) MTQSQTVTVDQQEILNRANEVEAPMADPPTDVPITPCELTAAKNAAQQLVLSADNMREYLAAGAKERQRLATSLRNAAKAYGEVDEEAATALDNDGEGTVQAESAGAVGGDSSAELTDTPRVATAGEPNFMDLKEAARKLETGDQGASLAHFADGWNTFNLTLQGDVKRFRGFDNWEGDAATACEASLDQQRQWILHMAKLSAAMAKQAQYVAQLHVWARREHPTYEDIVGLERLYAENPSARDQILPVYAEYQQRSEKVLTEYNNKAALEPVNPPKPPPAIKIDPPPPPQEQGLIPGFLMPPSDGSGVTPGTGMPAAPMVPPTGSPGGGLPADTAAQLTSAGREAAALSGDVAVKAASLGGGGGGGVPSAPLGSAIGGAESVRPAGAGDIAGLGQGRAGGGAALGGGGMGMPMGAAHQGQGGAKSKGSQQEDEALYTEDRAWTEAVIGNRRRQDSKESK a0qnk4_mycs2 MSMEG_0076 protein protein mycs2 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) MSEELQYELPGLERKAHECESTRPEGPGDATKPDELATTASVYSKLMASAAKLKATFAAGDREGERIAAAIRAAAGAYQKIEEQKAAELSRQMNGSDAPPPAAEAVVPDMSGIPGPLAIPSMEYPSAAAAADEMDWEAAARIIHSGDTQALSMKYFRDQWRDYQSTLEGHGRHFANPAEGWAGAAAETCAEAQRRLSTWWADMGAECGRLAQEATTFVDAHDKLVANHPTLENVREFEETEWASEWDRQNAWAMLQEQSEDALEAYANGSQIQEIRPGKPPSIGGLPAVNDGDVQASPTSAPGGPGGPGSGTPGGGGAGGGGGTPEMPELPSTDPSMSPMSANSAGEEQSSGSPSSGGSPSGSPSGGSPSGGGAPSGAGMPDGGLPSDLPGGPDIPGLDDPSLKPASAGGGGGGGVGGGGGGMPAAPLGPAVGADSVSPSPSSTRGGGVGVPGGPGGGAGGMMGGGMGGMGAGHGQGQGKEKKRDPKLAPDEDLYTEDRAHTEGVIGHRARREKDSGKQQ ecc1b_mycse ESX-1 secretion system protein EccCb1 eccCb1 0062 D806_0062 D806_000590 protein protein mycse Mycobacterium smegmatis (strain MKD8) MSTEAEPRVLREVVLSQLATGESRAYKMWLPPLTDPTPVNELVERDYQRRPLRFGLGIMDEPRRHRQEVWGVDVSAAGGNIAVGGAPQTGKSTFLQTLVVSAAATHTPRQVQFYCVDLGGGGLMYLEDLPHVGGVATRAEPDRVNRVVAEVKAVLRAREQVFKQYRVGSIASYREMRDDPSNPASQDPFGDVFLVIDGWPAFVAEFPDLEPAVQDIAGQGLAYGVHVIITTPRWTELKSRVRDYLGTKIEFRLGDVNETQIDRITREIPANRPGRAVSLEKHHLMMGVPRLDGVHSADNIVEAISSAVQQIAGRHTDQAPQVRVLPERIYLHQLDPNPPGPDSDYRTRWQVPLGVRESDLTVAYNQMHLTPHLLIFGAPKSGKTRIAHAVAQAICKRNSPQQVRFMLADYRSGLLDAVPQSHLLDAGAINRNSATLEEAIKALAVNLKKRLPPPDLTTAQLRARSWWSGPDVVLLVDDWHMVTAAAGMVSPMAPLGPLLPAAADIGLHVIVTCQMSMAHRATMDKFVGAAYGAGSPTLFLSGEKNDFPSRDIIVKKRPPGQAFLVGPDGKEVIQAAYVDPPEEEVFSPPSEGS esxb_myctu ESAT-6-like protein EsxB esxB cfp10 lhp mtsA10 Rv3874 MTV027.09 10 kDa culture filtrate antigen CFP-10 Secreted antigenic protein MTSA-10 protein protein myctu Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) MAEMKTDAATLAQEAGNFERISGDLKTQIDQVESTAGSLQGQWRGAAGTAAQAAVVRFQEAANKQKQELDEISTNIRQAGVQYSRADEEQQQALSSQMGF esxa_myctu 6 kDa early secretory antigenic target esxA esaT6 Rv3875 MTV027.10 ESAT-6 protein protein myctu Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSGSEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFA espb-1 3275422 N/A 3275433 unspecified role unspecified role unspecified role unspecified role Region 1-348 Region 1-348 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false a0qnk4_mycs2-1 3275423 N/A 3275434 unspecified role unspecified role unspecified role unspecified role Region 3-288 Region 3-288 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false espb-2 3275424 N/A 3275433 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false a0qnk4_mycs2-ecccb1-1 3275425 N/A 3275434 unspecified role unspecified role unspecified role unspecified role Region 70-100 Region 70-100 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false mycsm Mycobacterium smegmatis N/A 3275435 unspecified role unspecified role unspecified role unspecified role Region 341-593 Region 341-593 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false mycsm Mycobacterium smegmatis physical association physical association false false false espb-3 3275426 N/A 3275433 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false a0qnk4_mycs2-2 3275427 N/A 3275434 unspecified role unspecified role unspecified role unspecified role Region 8-296 Region 8-296 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false espb-4 3275428 N/A 3275433 unspecified role unspecified role unspecified role unspecified role Region 1-348 Region 1-348 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false CL-K259 CL-K259 xlnk-res-res crosslinked residues XLNK-Res-Res modified residue ms mass detection of residue modification modified residue ms certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false espb-5 3275429 N/A 3275433 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false espb-6 3275430 N/A 3275433 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false espb-7 3275431 N/A 3275433 unspecified role unspecified role unspecified role unspecified role Region 1-348 Region 1-348 sufficient to bind sufficient binding region sufficient to bind certain certain sequence position certain certain certain sequence position certain false CL-K259/267 CL-K259/267 xlnk-res-res crosslinked residues XLNK-Res-Res modified residue ms mass detection of residue modification modified residue ms certain certain sequence position certain certain certain sequence position certain false certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli direct interaction direct interaction false false false esxa-esxb-4 3275432 N/A 3275436 unspecified role unspecified role unspecified role unspecified role mycsm Mycobacterium smegmatis N/A 3275437 unspecified role unspecified role unspecified role unspecified role mycsm Mycobacterium smegmatis physical association physical association false false false