DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ cao-2013-3 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. DIP original experiment: DIP-252805X Nature 2013 IMEx Gating of the TrkH ion channel by its associated RCK protein TrkA. Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. Only protein-protein interactions imex curation cao-2013-4 ecolx Escherichia coli pull down pull down predetermined predetermined participant predetermined Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. DIP original experiment: DIP-252809X Nature 2013 IMEx Gating of the TrkH ion channel by its associated RCK protein TrkA. Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. Only protein-protein interactions imex curation cao-2013-5 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. DIP original experiment: DIP-252806X Nature 2013 IMEx Gating of the TrkH ion channel by its associated RCK protein TrkA. Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. Only protein-protein interactions imex curation cao-2013-6 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. DIP original experiment: DIP-252807X Nature 2013 IMEx Gating of the TrkH ion channel by its associated RCK protein TrkA. Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. Only protein-protein interactions imex curation cao-2013-7 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. DIP original experiment: DIP-252808X Nature 2013 IMEx Gating of the TrkH ion channel by its associated RCK protein TrkA. Cao Y., Pan Y., Huang H., Jin X., Levin EJ., Kloss B., Zhou M. Only protein-protein interactions imex curation a6b219_vibpq A79_5205 protein protein vibpq Vibrio parahaemolyticus serotype O3:K6 (strain AQ3810) MKIIILGAGQVGGTLAENLVGENNDITIVDNNADRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPNRVARIRSPEYLAEKEALFKSGAIPVDHLIAPEELVTSYIERLIQYPGALQVVSFAEQKVSLVAVKAYYGGPLVGNALSALREHMPHIDTRVAAIFRQGRPIRPQGTTIIEADDEVFFVAASNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERDYQRAEKLSEQLENTIVFCGDAADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRRADIVNVSSLRRGAAEAIEAVAHGDETTSKVVGRAIGDIKLPPGTTIGAVVRGEEVLIAHDRTVIEQDDHVVMFLVDKKYVPDVEALFQPSPFFL The sequence has been withdrawn from uniprot. a6b913_vibpq Trk system potassium uptake protein A79_3385 protein protein vibpq Vibrio parahaemolyticus serotype O3:K6 (strain AQ3810) MQFRSIIRIVGLLLALFSVTMLAPALVALLYRDGAGVPFVTTFFVLLFCGAMCWFPNRRHKHELKSRDGFLIVVLFWTVLGSAGSLPFLIADNPNISVTDAFFESFSALTTTGATVIVGLDELPKAILFYRQFLQWFGGMGIIVLAVAILPVLGIGGMQLYRAEIPGPVKDTKMTPRIAETAKALWYIYLSLTIACAVAFWLAGMTPFDAISHSFSTIAIGGFSTHDASMGYFDSYAINLITVVFLLISACNFTLHFAAFASGGVHPKYYWKDPEFRAFIFIQVLLFLVCFLLLLKHHSYTSPYDAFDQALFQTVSISTTAGFTTTGFADWPLFLPVLLLFSSFIGGCAGSTGGGMKVIRILLLTLQGARELKRLVHPRAVYTIKVGGSALPQRVVDAVWGFFSAYALVFVVCMLGLIATGMDELSAFSAVAATLNNLGPGLGEVALHFGDVNDKAKWVLIVSMLFGRLEIFTLLILLTPTFWRS The sequence has been withdrawn from uniprot. a6b219_vibpq-1 3252966 N/A 3252971 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false a6b219_vibpq-a6b913_vibpq-1 3252967 N/A 3252972 unspecified role unspecified role prey prey ecolx Escherichia coli N/A 3252971 unspecified role unspecified role bait bait His-tag His-tag his tag his tag Hexa-His-tag 6-His-tag Histidine-tag Hexa-His-tag Histidine-tag 6-His-tag c-term range C-terminal range c-term range c-term range C-terminal range c-term range false ecolx Escherichia coli physical association physical association false false false a6b219_vibpq-2 3252968 N/A 3252971 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false a6b219_vibpq-a6b913_vibpq-2 3252969 N/A 3252972 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3252971 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false a6b219_vibpq-a6b913_vibpq-3 3252970 N/A 3252972 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli N/A 3252971 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false