DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ osawa-2009-1 ecolx Escherichia coli molecular sieving molecular sieving Gel Filtration Size Exclusion Chromatography Size Exclusion Chromatography Gel Filtration Sizing column predetermined predetermined participant predetermined Osawa T., Ito K., Inanaga H., Nureki O., Tomita K., Numata T. DIP original experiment: DIP-132068X Structure (London, England : 1993) 2009 IMEx Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon. Osawa T., Ito K., Inanaga H., Nureki O., Tomita K., Numata T. Only protein-protein interactions imex curation osawa-2009-2 ecolx Escherichia coli x-ray diffraction x-ray crystallography X-ray X-ray x-ray diffraction predetermined predetermined participant predetermined Osawa T., Ito K., Inanaga H., Nureki O., Tomita K., Numata T. DIP original experiment: DIP-132069X Structure (London, England : 1993) 2009 IMEx Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon. Osawa T., Ito K., Inanaga H., Nureki O., Tomita K., Numata T. Only protein-protein interactions imex curation mnme_aquae tRNA modification GTPase MnmE mnmE thdF trmE aq_871 protein protein aquae Aquifex aeolicus (strain VF5) MREPIVAIATPYGESAIGIVRLSGKGVLDLVKKFFKTKREIKPRYAHFGVLYDDKGEELDEGVLIYYKAPHSYTGEDMVELNLHGNPRILKRALELFVNAGARLAEPGEFTKRAFLNGKLDLTQAEAVAELISAKTELARKVALKQLHGELSKHIRPLRETLLELLAYVEADIEFAEEDIPTLTKEQVIQMVDKVIEGINELLKTAKTGKFIREGVKLAIVGRPNVGKSSLFNALLKEERAIVTDIAGTTRDFIEETLQIKGVPVRLVDTAGIRETKDLVERIGVERSKQKVKEADLILFVIDASQEITEEDLRIYEEIKEKDHIVVANKVDLGIRANLEKFKGEKIVKVSALKGTGLEELSEEILKKVGANLEESVNIYISVRHETLLKKAKEVLERFKEEFREKDISPEIAMLDLREASDYLGEILGEITTEDLLGKIFSTFCIGK DEAA70777AF8C939 mnmg_aquae tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG mnmG Glucose-inhibited division protein A gidA aq_761 protein protein aquae Aquifex aeolicus (strain VF5) MAWVVDEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIYIGDKMIPGGRLGEPRSEGLSDFYRRFDFPLIRFKTGTPARLDKRTIDFSALEVAPGDDPPPKFSFWTEPVGSYWFPKGKEQVNCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKIVKFPDKERHQIFLEPEGLDTIEIYPNGLSTSLPEEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFGKEPIYLRRDESYIGVMIDDLTTKGVTEPYRLFTSRSEYRLYIRQDNAILRLAKLGRELGLLSEEQYKLVKELEREIEKWKEFYKSERVSVAVGGDTRSYSVATLMTMNYTLDDVKEKFGYEVPQHPYVKEEVEIQLKYEPYIERERKLNEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPITVGQASRIDGITPAAITALLVYLGKLD 1DAB1BDFEFCBA6DD aamnme-1 3190914 N/A 3190916 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false aagida-1 3190915 N/A 3190917 unspecified role unspecified role unspecified role unspecified role ecolx Escherichia coli direct interaction direct interaction false false false