DIP Database of Interacting Proteins 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ dip@mbi.ucla.edu 611 Young Drive East; Los Angeles CA 90095; USA http://dip.doe-mbi.ucla.edu/ yano-2008-5 in vitro In vitro protein kinase assay protein kinase assay predetermined predetermined participant predetermined Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. DIP original experiment: DIP-133576X Proceedings of the National Academy of Sciences of the United States of America 2008 IMEx CYCLOPS, a mediator of symbiotic intracellular accommodation. Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. Only protein-protein interactions imex curation yano-2008-6 yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. DIP original experiment: DIP-133572X Proceedings of the National Academy of Sciences of the United States of America 2008 IMEx CYCLOPS, a mediator of symbiotic intracellular accommodation. Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. Only protein-protein interactions imex curation yano-2008-7 yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. DIP original experiment: DIP-133574X Proceedings of the National Academy of Sciences of the United States of America 2008 IMEx CYCLOPS, a mediator of symbiotic intracellular accommodation. Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. Only protein-protein interactions imex curation yano-2008-8 yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast 2 hybrid two hybrid 2H 2h Gal4 transcription regeneration two-hybrid yeast two hybrid 2-hybrid classical two hybrid classical two hybrid 2H two-hybrid 2-hybrid Gal4 transcription regeneration 2h yeast two hybrid Y2H Y-2H 2 hybrid predetermined predetermined participant predetermined Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. DIP original experiment: DIP-133573X Proceedings of the National Academy of Sciences of the United States of America 2008 IMEx CYCLOPS, a mediator of symbiotic intracellular accommodation. Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. Only protein-protein interactions imex curation yano-2008-9 nicbe Nicotiana benthamiana bifc bimolecular fluorescence complementation bifc predetermined predetermined participant predetermined Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. DIP original experiment: DIP-133575X Proceedings of the National Academy of Sciences of the United States of America 2008 IMEx CYCLOPS, a mediator of symbiotic intracellular accommodation. Yano K., Yoshida S., Müller J., Singh S., Banba M., Vickers K., Markmann K., White C., Schuller B., Sato S., Asamizu E., Tabata S., Murooka Y., Perry J., Wang TL., Kawaguchi M., Imaizumi-Anraku H., Hayashi M., Parniske M. Only protein-protein interactions imex curation ccamk_lotja Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase CCAMK protein protein lotja Lotus japonicus Lotus corniculatus var. japonicus MGYDQTRKLSDEYEISEILGRGGFSVVRKGTKKSGNEKTQVAIKTLRRLGSSPSGTGGGQKSTATVMGFPSLRQVSVSDALLTNEILVMRRIVENVSPHPNVIDLYDVCEDSNGVHLVLELCSGGELFDRIVAQDKYAETEAAAVVRQIAAGLEAVHKADIVHRDLKPENCLFLDSRKDSPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGKITAKSDMWSLGVILYILLSGYPPFIAQNNRQKQQMIINGNFSFYEKTWKGITQSAKQLISSLLTVDPSKRPSAQELLSHPWVRGDKAKDEQMDPEIVSRLQSFNARRKLRAAAIASVWSSTIFLRTKKLRSLVGTYDLKEEEIESLRIHFKKICGNGDNATLSEFVEVLKAMKMPSLIPLAPRIFDLFDNNRDGTIDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLCALPEECLPADITEPGKLDEIFDLMDANSDGKVTFEEFKAAMQRDSSLQDMLLSSLRPS cclop_lotja Protein CYCLOPS IPD3 Protein IPD3 homolog protein protein lotja Lotus japonicus Lotus corniculatus var. japonicus MEGRGFSGLYRNSSEELFLKTVMESPIGMPVPSMEMLGFKNVSQGFRADSEELFKRWLTNGEGYNSSSIGFSSRLSKRISTELVNGSNQLQVGVASDGRNNDKPFIQNNLLANDVSGDFNFPIRDPVDRELQPSNLFLAKAWFLSDQRMTRSRSSELRRRYSEMQNGLATQGIESICMDPQHGAEATKQEVANFNGYNYLSMCELPSQKGSFMSPSNSCSSNFNTPQFGDMDKVSSCVSMLKGTLQRRRLSSQLEKEAAEDDLNGIFYPQEPLFQTGFDQGQENWSNQTPVNVQVDSIGEVKDHGVLQTLEGSTNPVVDGFANQINQIYVGTASGEPSQSESSNAAPVISSGLDTCEGPINSNQTLCESSWKQVGVSKSSENTQNRVKGFREQIMDNLKDDKKRKSLERYGSITSAVSDDKGDTTKKRRVERSRKMAEAKERNSTPSVPSDMQAVLKRCENLEKEVRSLKLNLSFMNRKDSEQTKQIEDLQKQNEELADEKERLLEEIERILSETEKM a9xmt3_lotja-ccamk-1 3181485 N/A 3181490 enzyme enzyme unspecified role unspecified role ecolx Escherichia coli N/A 3181491 enzyme target enzyme target substrate substrate unspecified role unspecified role Region 81-366 Region 81-366 sufficient to bind sufficient binding region sufficient to bind deletion analysis deletion analysis certain certain sequence position certain certain certain sequence position certain false ecolx Escherichia coli phosphorylation phosphorylation reaction phosphorylation false false false ccamk-a9xmt3_lotja-1 3181486 N/A 3181490 unspecified role unspecified role bait bait yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast N/A 3181491 unspecified role unspecified role prey prey Region 81-366 Region 81-366 sufficient to bind sufficient binding region sufficient to bind deletion analysis deletion analysis certain certain sequence position certain certain certain sequence position certain false yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast direct interaction direct interaction false false false ccamk-a9xmt3_lotja-2 3181487 N/A 3181490 unspecified role unspecified role bait bait Region 1-453 Region 1-453 sufficient to bind sufficient binding region sufficient to bind deletion analysis deletion analysis certain certain sequence position certain certain certain sequence position certain false A0AAR7:p.Gly30Glu G30E mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain false A0AAR7:p.Lys44Ala K44A mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain false A0AAR7:p.[Lys44Ala;Thr265Ile] K44A/T265I mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain false certain certain sequence position certain certain certain sequence position certain false yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast N/A 3181491 unspecified role unspecified role prey prey yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast direct interaction direct interaction false false false a9xmt3_lotja-a9xmt3_lotja-1 3181488 N/A 3181491 unspecified role unspecified role bait bait Region 1-259 Region 1-259 binding region binding-associated region binding region certain certain sequence position certain certain certain sequence position certain false yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast N/A 3181491 unspecified role unspecified role prey prey Region 81-366 Region 81-366 sufficient to bind sufficient binding region sufficient to bind deletion analysis deletion analysis certain certain sequence position certain certain certain sequence position certain false yeasx Saccharomyces cerevisiae (Baker's yeast) Baker's yeast direct interaction direct interaction false false false a9xmt3_lotja-ccamk-2 3181489 N/A 3181490 unspecified role unspecified role unspecified role unspecified role A0AAR7:p.Lys44Ala K44A mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain false A0AAR7:p.Gly30Glu G30E mutation disrupting mutation disrupting interaction mutation disrupting mutation analysis mutation analysis certain certain sequence position certain certain certain sequence position certain false nicbe Nicotiana benthamiana N/A 3181491 unspecified role unspecified role unspecified role unspecified role nicbe Nicotiana benthamiana direct interaction direct interaction false false false